View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9820_low_22 (Length: 284)
Name: NF9820_low_22
Description: NF9820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9820_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 19094851 - 19094576
Alignment:
| Q |
1 |
tggacaaccaatacttaaaatgcaaagcgtgttatgagccacgcatcatgccatcatgaagagagatgaagtggttcgctattgccatcatgtcaaggaa |
100 |
Q |
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| T |
19094851 |
tggacaaccaatacttaaaatgcaaagcgtgttatgagccacgcatcatgccatcatgaagagagatgaagtggttcgctattgccatcatgtcaaggaa |
19094752 |
T |
|
| Q |
101 |
ttcaagcatgatgacagagatgccttcttcaattccattcaatacattatacttatgtaaatttggtaccttttttatccgttaagaacgtcagtagtga |
200 |
Q |
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| T |
19094751 |
ttcaagcatgatgacagagatgccttcttcaatttcattcaatacattatacttatgtaaatttggtaccttttttatccgttaagaacgt-agtagtga |
19094653 |
T |
|
| Q |
201 |
agctaggtcatcaaagagttatacagtagtctcattctgggttccaatgttccggtctacgacacaagtctatgttt |
277 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19094652 |
agctaggtcatcaaagagttatacagtagtcccattctgggttccaatgttccggtctacgacacaagtctatgttt |
19094576 |
T |
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