View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9820_low_24 (Length: 274)

Name: NF9820_low_24
Description: NF9820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9820_low_24
NF9820_low_24
[»] chr4 (24 HSPs)
chr4 (18-268)||(26617393-26617643)
chr4 (65-168)||(32818380-32818483)
chr4 (68-170)||(49138771-49138872)
chr4 (68-169)||(50061637-50061738)
chr4 (65-160)||(35065035-35065130)
chr4 (63-144)||(9134580-9134661)
chr4 (90-175)||(52965857-52965942)
chr4 (65-144)||(9064203-9064282)
chr4 (94-160)||(30357513-30357579)
chr4 (67-144)||(20712848-20712925)
chr4 (94-155)||(30357648-30357709)
chr4 (187-251)||(43868242-43868306)
chr4 (71-145)||(2206376-2206451)
chr4 (68-146)||(8330090-8330169)
chr4 (71-126)||(29779106-29779161)
chr4 (75-128)||(11271587-11271641)
chr4 (65-146)||(33560602-33560684)
chr4 (76-110)||(33843661-33843695)
chr4 (68-144)||(18597014-18597091)
chr4 (65-125)||(25319019-25319080)
chr4 (69-146)||(25405563-25405640)
chr4 (68-144)||(2635138-2635214)
chr4 (67-146)||(22683837-22683917)
chr4 (54-142)||(39733674-39733761)
[»] chr8 (21 HSPs)
chr8 (67-175)||(37684379-37684487)
chr8 (68-175)||(32927867-32927974)
chr8 (68-169)||(44141059-44141160)
chr8 (85-175)||(13384657-13384747)
chr8 (65-175)||(38868470-38868580)
chr8 (68-144)||(11572492-11572568)
chr8 (63-159)||(16972083-16972179)
chr8 (70-169)||(4662912-4663011)
chr8 (94-170)||(15677823-15677900)
chr8 (63-146)||(10367965-10368048)
chr8 (97-175)||(26100149-26100227)
chr8 (65-142)||(26668524-26668601)
chr8 (70-175)||(32101050-32101155)
chr8 (79-144)||(38537392-38537457)
chr8 (94-160)||(32994260-32994326)
chr8 (94-168)||(35494991-35495065)
chr8 (70-148)||(35495237-35495315)
chr8 (76-128)||(1836262-1836315)
chr8 (68-101)||(40881074-40881107)
chr8 (65-130)||(41318827-41318892)
chr8 (68-112)||(4950459-4950503)
[»] scaffold0168 (1 HSPs)
scaffold0168 (23-144)||(31753-31877)
[»] chr6 (21 HSPs)
chr6 (69-175)||(5724633-5724739)
chr6 (65-144)||(2234487-2234566)
chr6 (69-175)||(26280581-26280687)
chr6 (70-175)||(4910885-4910990)
chr6 (68-132)||(16540082-16540146)
chr6 (63-175)||(25195369-25195479)
chr6 (68-175)||(765391-765496)
chr6 (67-166)||(6654102-6654201)
chr6 (65-175)||(434240-434350)
chr6 (117-175)||(17225876-17225934)
chr6 (70-124)||(35098228-35098282)
chr6 (73-146)||(852512-852585)
chr6 (67-144)||(1485180-1485257)
chr6 (78-139)||(7952748-7952809)
chr6 (77-146)||(30927027-30927096)
chr6 (189-251)||(46203-46265)
chr6 (70-175)||(34620863-34620968)
chr6 (70-175)||(34748300-34748405)
chr6 (187-251)||(765300-765364)
chr6 (75-159)||(8854902-8854986)
chr6 (65-145)||(10400728-10400808)
[»] chr7 (12 HSPs)
chr7 (67-144)||(5489880-5489957)
chr7 (65-175)||(41386818-41386928)
chr7 (70-142)||(28725088-28725160)
chr7 (69-146)||(30182328-30182404)
chr7 (21-144)||(27571787-27571913)
chr7 (187-251)||(40491684-40491748)
chr7 (65-141)||(45004992-45005068)
chr7 (73-128)||(15903580-15903635)
chr7 (65-144)||(22195836-22195915)
chr7 (68-144)||(31625398-31625474)
chr7 (70-166)||(35772235-35772331)
chr7 (94-146)||(38123698-38123750)
[»] chr1 (19 HSPs)
chr1 (50-146)||(6021761-6021857)
chr1 (65-146)||(28083920-28084001)
chr1 (95-175)||(11049252-11049332)
chr1 (76-175)||(1514326-1514425)
chr1 (80-146)||(48549044-48549110)
chr1 (69-155)||(31362228-31362310)
chr1 (100-175)||(7524120-7524195)
chr1 (65-175)||(47321910-47322019)
chr1 (94-175)||(3016163-3016244)
chr1 (73-146)||(10324970-10325043)
chr1 (53-176)||(2099690-2099811)
chr1 (95-146)||(3515820-3515871)
chr1 (94-175)||(35961371-35961450)
chr1 (68-146)||(51500866-51500939)
chr1 (94-175)||(30850402-30850483)
chr1 (101-146)||(33693029-33693074)
chr1 (67-144)||(47892422-47892499)
chr1 (69-120)||(5268194-5268246)
chr1 (67-175)||(50569646-50569754)
[»] chr2 (25 HSPs)
chr2 (68-146)||(2002727-2002805)
chr2 (65-175)||(10644575-10644685)
chr2 (65-175)||(33019159-33019269)
chr2 (58-175)||(30503174-30503291)
chr2 (96-170)||(5533039-5533113)
chr2 (67-144)||(31453357-31453434)
chr2 (74-159)||(42982523-42982610)
chr2 (84-146)||(42740968-42741030)
chr2 (68-145)||(22535973-22536050)
chr2 (100-168)||(17281416-17281484)
chr2 (67-126)||(17505211-17505268)
chr2 (111-175)||(32596009-32596073)
chr2 (65-115)||(11510925-11510976)
chr2 (94-169)||(12037062-12037137)
chr2 (72-175)||(16518758-16518860)
chr2 (67-175)||(37420198-37420308)
chr2 (65-111)||(680344-680390)
chr2 (68-146)||(21659694-21659772)
chr2 (53-175)||(26032038-26032160)
chr2 (94-175)||(43501126-43501205)
chr2 (68-145)||(1976899-1976975)
chr2 (94-127)||(21234576-21234609)
chr2 (69-146)||(37745907-37745984)
chr2 (72-144)||(10618975-10619047)
chr2 (67-126)||(36987163-36987223)
[»] chr5 (15 HSPs)
chr5 (76-175)||(9818717-9818817)
chr5 (94-175)||(6951308-6951389)
chr5 (70-146)||(42439649-42439726)
chr5 (67-146)||(36639911-36639990)
chr5 (67-144)||(34250385-34250462)
chr5 (65-144)||(11648054-11648133)
chr5 (96-175)||(15368376-15368455)
chr5 (94-144)||(18851116-18851166)
chr5 (73-175)||(31906239-31906341)
chr5 (94-167)||(39097247-39097320)
chr5 (191-251)||(7035045-7035105)
chr5 (102-170)||(22572412-22572480)
chr5 (86-144)||(38845436-38845494)
chr5 (73-180)||(13171758-13171866)
chr5 (68-175)||(33608478-33608586)
[»] chr3 (24 HSPs)
chr3 (67-130)||(7717369-7717432)
chr3 (69-146)||(44771670-44771747)
chr3 (68-144)||(54596793-54596869)
chr3 (65-144)||(35058333-35058412)
chr3 (71-144)||(35264445-35264518)
chr3 (73-144)||(25359608-25359679)
chr3 (68-127)||(41115413-41115472)
chr3 (68-146)||(5406881-5406959)
chr3 (65-146)||(32523372-32523454)
chr3 (69-114)||(30301063-30301108)
chr3 (65-130)||(40736585-40736650)
chr3 (23-99)||(48410891-48410970)
chr3 (187-251)||(35264326-35264390)
chr3 (96-148)||(42375528-42375580)
chr3 (96-148)||(42404242-42404294)
chr3 (68-146)||(39256650-39256729)
chr3 (97-175)||(52364055-52364133)
chr3 (94-167)||(4526133-4526206)
chr3 (73-146)||(37335066-37335139)
chr3 (94-143)||(40147885-40147934)
chr3 (112-168)||(4401416-4401472)
chr3 (68-144)||(36302158-36302234)
chr3 (68-111)||(38022410-38022454)
chr3 (72-144)||(44958640-44958712)
[»] scaffold0393 (1 HSPs)
scaffold0393 (68-111)||(12373-12417)
[»] scaffold0024 (1 HSPs)
scaffold0024 (72-175)||(23596-23699)
[»] scaffold0361 (1 HSPs)
scaffold0361 (68-146)||(14146-14223)


Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 26617393 - 26617643
Alignment:
Q  18 gatatttgattctaaaggtgtggaattgattccaagttttattgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatct 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26617393 gatatttgattctaaaggtgtggaattgattccaagtgttattgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatct 26617492  T
Q  118 gtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttttcaaacaacgttcactttactttcaactcacttttaatggga 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26617493 gtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttttcaaacaacgttaactttactttcaactcacttttaatggga 26617592  T
Q  218 attaattttccagaatcaagtcactcaaaatcaactatcatcaccaccaaa 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26617593 attaattttccagaatcaagtcactcaaaatcaactatcatcaccaccaaa 26617643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 32818483 - 32818380
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattc 164  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||| |||||||||||||| || |||||||||||  | | ||||||||| |||    
T  32818483 tcgagtagaattgattttgcctccagaattgattctatttgaagctagaatttgtagcttttgattctagaattgatttttgcacacaaatttatagttc 32818384  T
Q  165 aact 168  Q
    ||||    
T  32818383 aact 32818380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 49138872 - 49138771
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaac 167  Q
    |||| |||||||||||||||||||  | ||||||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||  ||||| ||||||    
T  49138872 agtaaaattgattttgcctccaaactt-attctacttgaagctaggatttgtaacttttgattctaaaattgatttttatacacaagcttatagttcaac 49138774  T
Q  168 tca 170  Q
    |||    
T  49138773 tca 49138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 50061738 - 50061637
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaac 167  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| || ||||| |||||||| || | |||||||| | | |||| |||||  ||||||    
T  50061738 agtagaattgattttgcctccaaaattgattctacttgaagttaggatttgtagtttttgattctagagttgattttcacacataattttatggttcaac 50061639  T
Q  168 tc 169  Q
    ||    
T  50061638 tc 50061637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 35065035 - 35065130
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttata 160  Q
    ||||||||||||||||||||||| | || ||||| ||||||||||||| || |||  ||||||||| || |||||||||||| | | |||||||||    
T  35065035 tcgagtagaattgattttgcctcaataattgattttacttgaagctagtatttgtgacttttgattctagaattgatttttacacacaaatttata 35065130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 9134580 - 9134661
Alignment:
Q  63 tatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||| ||||||||||| | |||| || |||| ||||||||||||| ||| |||||||||||||| || ||||||||||    
T  9134580 tatcgagtggaattgattttacttccagaattgatcctacttgaagctaaaatttgtagcttttgattttagaattgatttt 9134661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 52965942 - 52965857
Alignment:
Q  90 aaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    |||| |||||||||||||| ||  || | |||||||||||| ||||||||||| | | | ||||||||||||||||||||| ||||    
T  52965942 aaaacgattctacttgaagttactatttatagcttttgattctaaaattgattctaacacataaatttataattcaactcactttt 52965857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 9064203 - 9064282
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||| ||||||| | |||||| ||| || |||||||||||||| ||||||| ||||| |||||||| || ||||||||||    
T  9064203 tcgaatagaattaaatttgccaccataattgattctacttgaaactagaatttgtagtttttgattctagaattgatttt 9064282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 30357513 - 30357579
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttata 160  Q
    |||||||||||||||||   || ||||||||||||||||| |||||||||||| | | |||||||||    
T  30357513 tgattctacttgaagctgtgatttgtagcttttgattatataattgatttttacacacaaatttata 30357579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 20712925 - 20712848
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    ||||| ||||||||||||||||  ||| ||||||||||||||||| ||| ||||| |||| |||  | ||||||||||    
T  20712925 gagtaaaattgattttgcctcccgaaacgattctacttgaagctaaaatttgtagttttttattgaagaattgatttt 20712848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 30357648 - 30357709
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaat 155  Q
    |||||||| |||||||||  |||||||||||||||||||| |||| ||||||| | ||||||    
T  30357648 tgattctaattgaagctatgatctgtagcttttgattatataatttatttttacacataaat 30357709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 43868242 - 43868306
Alignment:
Q  187 tcactttactttcaactcacttttaatgggaattaattttccagaatcaagtcactcaaaatcaa 251  Q
    ||||||||||||||||| ||||||||   ||||||||||| || |||||| ||| ||||||||||    
T  43868242 tcactttactttcaacttacttttaactagaattaattttacaaaatcaattcattcaaaatcaa 43868306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 2206451 - 2206376
Alignment:
Q  71 agaattgattttgcctccaaaaatgattcta-cttgaagctagaatctgtagcttttgattataaaattgattttt 145  Q
    |||||||||||| ||||||||| |||||||| |||||||||| ||  || ||||||||||| ||  ||||||||||    
T  2206451 agaattgatttttcctccaaaattgattctagcttgaagctaaaaattggagcttttgattctaggattgattttt 2206376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 8330090 - 8330169
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattcta-cttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||| |||||||| |||||||| ||  ||||||| |||||||||||||  || ||||||||||| || ||||||||||||    
T  8330090 agtaaaattgattctgcctccataatggattctaacttgaagctagaaattggagcttttgattctataattgattttta 8330169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 29779161 - 29779106
Alignment:
Q  71 agaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagctttt 126  Q
    |||||||||||||| |  | || |||||||||||||||||||||| ||||||||||    
T  29779161 agaattgattttgcttgtagaattgattctacttgaagctagaatttgtagctttt 29779106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 11271641 - 11271587
Alignment:
Q  75 ttgattttgcctccaaaaatgattcta-cttgaagctagaatctgtagcttttga 128  Q
    ||||||||||||||| || |||||||| ||||||||||| || ||||||||||||    
T  11271641 ttgattttgcctccagaattgattctaacttgaagctaggatttgtagcttttga 11271587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 33560684 - 33560602
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattct-acttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||||||||||||| | || ||||||| ||   ||||||| || |||||||||||| | ||||| |||||||||    
T  33560684 tcgagtagaattgattttgcctctagaattgattctaaccgaaagctaggatttgtagcttttgagtctaaaagtgattttta 33560602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 33843661 - 33843695
Alignment:
Q  76 tgattttgcctccaaaaatgattctacttgaagct 110  Q
    ||||||||||||||||| |||||||||||||||||    
T  33843661 tgattttgcctccaaaattgattctacttgaagct 33843695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 18597014 - 18597091
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattcta-cttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||| |||||||||| |||||| || |||||||| |||||||||| ||| || | ||||||||| || ||||||||||    
T  18597014 agtaaaattgattttacctccagaattgattctaacttgaagctataatttgaaccttttgattctataattgatttt 18597091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 25319019 - 25319080
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattct-acttgaagctagaatctgtagcttt 125  Q
    ||||||||||||||||||| ||||| || ||||||| |||||||| ||| || |||||||||    
T  25319019 tcgagtagaattgattttgtctccagaattgattctaacttgaaggtaggatttgtagcttt 25319080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 25405563 - 25405640
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||||||||||||||| ||||||| |||||  | || ||||||  || ||||| |||||  |||||||||||||||||    
T  25405563 gtagaattgattttgcttccaaaattgatttgatttaaagctattatttgtagtttttgcatataaaattgattttta 25405640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 2635138 - 2635214
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    ||||||| |||||||||||||| || ||||| | ||||||||||||   || ||||||||| | || ||||||||||    
T  2635138 agtagaactgattttgcctccagaattgattatgcttgaagctagagattggagcttttgagtctagaattgatttt 2635214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 22683837 - 22683917
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattcta-cttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||| ||||||||||||||||| || | ||| || ||||||||||  ||||||||||||||| | ||||  |||||||||    
T  22683837 gagtaaaattgattttgcctccagaattaattataacttgaagctatgatctgtagcttttgagtctaaacgtgattttta 22683917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 39733761 - 39733674
Alignment:
Q  54 ttttattgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatt 142  Q
    |||| ||| |||| |||| |||| ||| |||||||| || |||||||||||| || || ||| |||||||||||||| || ||||||||    
T  39733761 ttttgttgttatcaagtataatttattctgcctccataattgattctacttg-agttacaatttgtagcttttgattgtagaattgatt 39733674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 37684379 - 37684487
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaa 166  Q
    ||||||||||||||||| ||||| || ||||||||||||||| ||| || ||| |||||||||| ||||||||||||| ||  | |||||||||||||||    
T  37684379 gagtagaattgattttgtctccagaattgattctacttgaagttaggatttgtggcttttgattctaaaattgattttaatgcaaaaatttataattcaa 37684478  T
Q  167 ctcagtttt 175  Q
    |||| ||||    
T  37684479 ctcactttt 37684487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 32927867 - 32927974
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaac 167  Q
    |||||||||||||||||||| | |  ||||||||||||||||||| || ||||||||||||||||| |||| ||||||| | | ||||||||| ||||||    
T  32927867 agtagaattgattttgcctcaatagttgattctacttgaagctaggatttgtagcttttgattatagaattcatttttacacacaaatttatagttcaac 32927966  T
Q  168 tcagtttt 175  Q
    ||| ||||    
T  32927967 tcactttt 32927974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 44141160 - 44141059
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaac 167  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| || ||||| |||||||| || | |||||||| | | |||| |||||| ||||||    
T  44141160 agtagaattgattttgcctccaaaattgattctacttgaagttaggatttgtagtttttgattctagagttgattttcacacataattttatagttcaac 44141061  T
Q  168 tc 169  Q
    ||    
T  44141060 tc 44141059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 13384747 - 13384657
Alignment:
Q  85 ctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||| || |||||||||| | | | ||||||||| ||||||||| ||||    
T  13384747 ctccaaaattgattctatttgaagctaaaatttgtagcttttgattctagaattgattttcacacacaaatttatagttcaactcactttt 13384657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 38868470 - 38868580
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattc 164  Q
    ||||||| |||||||  |||||| |||| ||||||||||||||||||  || ||||||||||| || || |||||||||| | | | ||||||||| |||    
T  38868470 tcgagtaaaattgatgatgcctctaaaattgattctacttgaagctaagatttgtagcttttggttctataattgattttcacacacaaatttatagttc 38868569  T
Q  165 aactcagtttt 175  Q
    |||||| ||||    
T  38868570 aactcaatttt 38868580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 11572568 - 11572492
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    ||||||||||||||| | | || || ||||| |||||||||||| ||| ||||| ||||||||||||||||||||||    
T  11572568 agtagaattgattttacttacataattgattatacttgaagctaaaatttgtagattttgattataaaattgatttt 11572492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 16972179 - 16972083
Alignment:
Q  63 tatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttat 159  Q
    |||||||||||||||||||||||| || |  ||||| || ||||||||||||| ||||| |||| ||| || |||||||||||| | | ||||||||    
T  16972179 tatcgagtagaattgattttgccttcagagttgattgtatttgaagctagaatttgtagtttttaattttagaattgatttttaaacacaaatttat 16972083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 4663011 - 4662912
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactc 169  Q
    ||||||||||||||| |||  || | ||||||||||||||||| || ||||||||||| || || |||||||||||| | | |||| |||| ||||||||    
T  4663011 tagaattgattttgcatccggaatttattctacttgaagctaggatttgtagcttttgtttctagaattgatttttacacacaaatgtatagttcaactc 4662912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 15677900 - 15677823
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgat-ttttatagataaatttataattcaactca 170  Q
    ||||||||||||||||||| || | ||||||||||||||| ||||||| ||||| | | ||||||||| |||||||||    
T  15677900 tgattctacttgaagctaggatttatagcttttgattatagaattgattttttacacacaaatttatagttcaactca 15677823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 10367965 - 10368048
Alignment:
Q  63 tatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||| ||||||||||| ||||||| || || |||||||||| ||||| || || ||||||||||| || |||| |||||||    
T  10367965 tatcgagaagaattgatttcgcctccacaattggttctacttgaggctaggatttgcagcttttgattctagaattcattttta 10368048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 26100227 - 26100149
Alignment:
Q  97 ttctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    ||||| |||||||||| || |||||||||||||| || |||||||||||| | | ||||||||  ||||||||| ||||    
T  26100227 ttctatttgaagctaggatttgtagcttttgattctataattgatttttacacacaaatttatggttcaactcactttt 26100149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 26668524 - 26668601
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatt 142  Q
    |||||||||||||||| |||||||| || ||||||||||| || ||| ||| ||||| |||| ||| || ||||||||    
T  26668524 tcgagtagaattgattctgcctccataattgattctacttaaaactacaatttgtagttttttattctataattgatt 26668601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 32101050 - 32101155
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactc 169  Q
    ||||||||||| || || || || | ||||||||| ||| |||||| ||||| |||| ||| ||||||| ||||| ||| | ||||||||| ||||||||    
T  32101050 tagaattgattatgtcttcagaactaattctacttaaagttagaatttgtagtttttaattttaaaattaattttcatatacaaatttatagttcaactc 32101149  T
Q  170 agtttt 175  Q
    | ||||    
T  32101150 actttt 32101155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 38537457 - 38537392
Alignment:
Q  79 ttttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||||| || |||||||||||||||||| ||||| ||| ||||| || | ||||||||    
T  38537457 ttttgcctccaaaattgtttctacttgaagctagaaactgtaccttctgattctagagttgatttt 38537392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 32994326 - 32994260
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttata 160  Q
    ||||||||||||||||||  || | |||||||||| | || |||||||||||||| | |||||||||    
T  32994326 tgattctacttgaagctatgatttctagcttttgagtctagaattgatttttatacacaaatttata 32994260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 35494991 - 35495065
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaact 168  Q
    ||||||||| ||||||||| || |||||||||||||| || ||||| |||||| | | |||| |||| |||||||    
T  35494991 tgattctacatgaagctaggatttgtagcttttgattctagaattgttttttacacacaaatctatagttcaact 35495065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 148
Target Start/End: Original strand, 35495237 - 35495315
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttata 148  Q
    ||||||| |||||||||| | || |||||||||||||||||| | | | ||| || ||||| || ||||||||||||||    
T  35495237 tagaattaattttgcctctagaattgattctacttgaagctacactatctagattctgattctataattgatttttata 35495315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 1836315 - 1836262
Alignment:
Q  76 tgattttgcctccaaaaatgattcta-cttgaagctagaatctgtagcttttga 128  Q
    |||||||||||| |||| |||||||| ||||||||||| || ||||||||||||    
T  1836315 tgattttgcctctaaaattgattctaacttgaagctaggatgtgtagcttttga 1836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 40881074 - 40881107
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattcta 101  Q
    |||||||||||||||||||||| |||||||||||    
T  40881074 agtagaattgattttgcctccagaaatgattcta 40881107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 41318892 - 41318827
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgatt 130  Q
    |||| ||||||| |||||||||  |||| ||||||||||||||| |||||| ||||  ||||||||    
T  41318892 tcgaatagaatttattttgcctttaaaattgattctacttgaagttagaatttgtacattttgatt 41318827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 4950459 - 4950503
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctag 112  Q
    |||||||||||||||||||| |||| |||||  ||||||||||||    
T  4950459 agtagaattgattttgcctcaaaaattgattagacttgaagctag 4950503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 31753 - 31877
Alignment:
Q  23 ttgattctaaaggtgtggaattgattc---caagttttattgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgt 119  Q
    ||||||||| |||||| ||||||||||   || ||||  ||| | ||||||| |||||||| ||||||||||| ||||| ||||||||||||| || |||    
T  31753 ttgattctagaggtgtagaattgattctgacatgtttggttgttgtcgagtaaaattgattctgcctccaaaattgattatacttgaagctaggatttgt 31852  T
Q  120 agcttttgattataaaattgatttt 144  Q
    |||||||||||||  ||||||||||    
T  31853 agcttttgattattgaattgatttt 31877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 5724739 - 5724633
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaact 168  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || |||| ||||| ||| || |||||||||||| | | |||| ||| ||| ||||    
T  5724739 gtagaattgattttgcctccaaaattgattctacttgaagctaggatttgtaactttttattctataattgatttttacacacaaatatatcatttaact 5724640  T
Q  169 cagtttt 175  Q
    || ||||    
T  5724639 cactttt 5724633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 2234487 - 2234566
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||| || ||| ||||||||||| || ||||||||||    
T  2234487 tcgagtagaattgattttgccttcaaaattgattcaacttgaagctaaaaactgaagcttttgattctagaattgatttt 2234566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 26280581 - 26280687
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaact 168  Q
    ||||||||||||||||||| | || |||||| ||||||||||||||| ||||| ||||||||  ||||||||||||||   | ||||||||| || ||||    
T  26280581 gtagaattgattttgcctcaagaattgattccacttgaagctagaatttgtagtttttgattccaaaattgatttttacgtacaaatttatagttaaact 26280680  T
Q  169 cagtttt 175  Q
    || ||||    
T  26280681 cactttt 26280687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 4910885 - 4910990
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactc 169  Q
    ||||||||||| |||||| |||| ||||||||||||||||||  || |||||||||||||| || |||||||||| | | | ||||||||| ||| ||||    
T  4910885 tagaattgattctgcctcaaaaattgattctacttgaagctatgatttgtagcttttgattctagaattgattttcacatacaaatttatagttcgactc 4910984  T
Q  170 agtttt 175  Q
    | ||||    
T  4910985 actttt 4910990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 16540082 - 16540146
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattat 132  Q
    |||| |||||||| || |||||||| ||||||||||||||||||| || ||||||||||||||||    
T  16540082 agtaaaattgattctgtctccaaaattgattctacttgaagctaggatttgtagcttttgattat 16540146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 25195479 - 25195369
Alignment:
Q  63 tatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataat 162  Q
    ||||||||| |||||||| |||||||  || ||||||||||||||||  | || ||||| |||| ||| || |||||||||| ||| | ||||||| |||    
T  25195479 tatcgagtataattgattctgcctccggaattgattctacttgaagc--ggatttgtagtttttcattctataattgattttcatacacaaatttacaat 25195382  T
Q  163 tcaactcagtttt 175  Q
    |||||||| ||||    
T  25195381 tcaactcactttt 25195369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 765496 - 765391
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaac 167  Q
    ||||||| || ||||| ||| | || ||||||||||||||||||  || |||||||||||||| || |||||||| ||| ||  ||||||||| ||||||    
T  765496 agtagaactggttttggctcaagaattgattctacttgaagctatgatttgtagcttttgattctagaattgattattaaag--aaatttatagttcaac 765399  T
Q  168 tcagtttt 175  Q
    ||| ||||    
T  765398 tcattttt 765391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 6654201 - 6654102
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaa 166  Q
    |||||||||||||||| ||| || || | ||||||||||||||||| || |||||||||| ||| || | |||||||| | | | ||||||||| |||||    
T  6654201 gagtagaattgatttttccttcagaattaattctacttgaagctaggatttgtagcttttaattctagatttgattttcacacagaaatttatagttcaa 6654102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 434350 - 434240
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattc 164  Q
    |||| ||||||||||||| | | || || ||||| || |||||| || |||   |||||||||||| || |||||||||||||| ||||||||| | |||    
T  434350 tcgattagaattgatttttctttcataattgattatatttgaagttaaaattaatagcttttgattttagaattgatttttatacataaatttaaatttc 434251  T
Q  165 aactcagtttt 175  Q
    |||||| ||||    
T  434250 aactcactttt 434240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 17225876 - 17225934
Alignment:
Q  117 tgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    |||||||||||||| || |||||||||||| | | ||||||||| ||||||||||||||    
T  17225876 tgtagcttttgattctagaattgatttttacatacaaatttatagttcaactcagtttt 17225934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 35098282 - 35098228
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagctt 124  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||  ||||||||    
T  35098282 tagaattgattttgcctacaaaattgattctaattgaagctagaaattgtagctt 35098228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 852512 - 852585
Alignment:
Q  73 aattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||| |||||||||||| || |||||| ||||||||||||||  ||||| || ||||| || ||||||||||||    
T  852512 aatttattttgcctccataattgattcaacttgaagctagaaattgtaggttctgattctagaattgattttta 852585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 1485257 - 1485180
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||| |||||||||  | || |||||||||||||| ||||||  || ||||||||||| || ||||||||||    
T  1485257 gagtagaattaattttgcctttagaattgattctacttgaatctagaaattggagcttttgattctagaattgatttt 1485180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 7952809 - 7952748
Alignment:
Q  78 attttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattg 139  Q
    ||||||||||||||| | |||||||||||||| || || |||||||||||||| || |||||    
T  7952809 attttgcctccaaaatttattctacttgaagcgaggatttgtagcttttgattctagaattg 7952748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 30927027 - 30927096
Alignment:
Q  77 gattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||||||| |||| || ||||| ||||||||||||  ||  |||||||||||||||| ||||||||||||    
T  30927027 gattttgcttccagaattgattatacttgaagctaagattcgtagcttttgattatagaattgattttta 30927096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 46265 - 46203
Alignment:
Q  189 actttactttcaactcacttttaatgggaattaattttccagaatcaagtcactcaaaatcaa 251  Q
    |||||| || ||||||||||||| |  |||| |||||| ||||||||| ||||||||||||||    
T  46265 actttaattgcaactcacttttagttagaatcaattttacagaatcaattcactcaaaatcaa 46203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 34620863 - 34620968
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactc 169  Q
    ||||||| |||||||||||  || ||||||||| |||||||||||    |||||| ||||| || |||||||||||| |   ||||||||  ||||||||    
T  34620863 tagaattaattttgcctccggaattgattctacatgaagctagaaatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactc 34620962  T
Q  170 agtttt 175  Q
    | ||||    
T  34620963 actttt 34620968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 34748300 - 34748405
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactc 169  Q
    ||||||| |||||||||||  || ||||||||| |||||||||||    |||||| ||||| || |||||||||||| |   ||||||||  ||||||||    
T  34748300 tagaattaattttgcctccggaattgattctacatgaagctagaaatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactc 34748399  T
Q  170 agtttt 175  Q
    | ||||    
T  34748400 actttt 34748405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 765364 - 765300
Alignment:
Q  187 tcactttactttcaactcacttttaatgggaattaattttccagaatcaagtcactcaaaatcaa 251  Q
    ||||||||||||||||| ||||||| |  |||| |||||| || |||||  ||||||||||||||    
T  765364 tcactttactttcaacttacttttagttagaatcaattttacacaatcatttcactcaaaatcaa 765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 8854902 - 8854986
Alignment:
Q  75 ttgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttat 159  Q
    |||||||| |||| | || || |||||| |||||||| ||| ||||| |||||| |||| |||||||||||| | | ||||||||    
T  8854902 ttgattttacctcaagaattgtttctacatgaagctacaatttgtagtttttgactatagaattgatttttacatacaaatttat 8854986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 10400808 - 10400728
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttt 145  Q
    ||||||||||||| ||||||| | | || | |||||| |||||| ||| || | |||| ||||||| ||||||||||||||    
T  10400808 tcgagtagaattgtttttgccactagaattaattctagttgaagttaggatttctagcctttgattctaaaattgattttt 10400728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 5489957 - 5489880
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||  || |||||||||||||| ||||||||||    
T  5489957 gagtagaattaattttgcctccaaaattgattctacttgatgctagaaattggagcttttgattatataattgatttt 5489880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 41386928 - 41386818
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattc 164  Q
    ||||||| |||||||||  ||| || || ||||||||||||||||||| || |||||||||| ||| || ||||||| |||| | | |||||||||||||    
T  41386928 tcgagtataattgatttcaccttcagaattgattctacttgaagctaggatttgtagcttttaattctagaattgatatttacacacaaatttataattc 41386829  T
Q  165 aactcagtttt 175  Q
    |||||| ||||    
T  41386828 aactcactttt 41386818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 28725160 - 28725088
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatt 142  Q
    |||||||||||  |||||||| | ||||| |||||||||||||||| |||||||||||||| || ||||||||    
T  28725160 tagaattgattcagcctccaatattgattatacttgaagctagaatttgtagcttttgattctataattgatt 28725088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 30182404 - 30182328
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||||||||||||  ||||||||| |||||||||||||||||| ||  |||||||||||||| || |||| |||||||    
T  30182404 gtagaattgatttc-cctccaaaattgattctacttgaagctaaaaattgtagcttttgattctagaattaattttta 30182328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 27571787 - 27571913
Alignment:
Q  21 atttgattctaaaggtgtggaattgattccaa---gttttattgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatct 117  Q
    ||||||||| | |||||| ||||||| ||| |   |||| |||| | ||||||| |||||||||| |||| | || ||||||||||||||| |||||  |    
T  27571787 atttgattcaagaggtgtagaattgactcctacatgtttgattgctctcgagtataattgattttacctcaagaattgattctacttgaagttagaaatt 27571886  T
Q  118 gtagcttttgattataaaattgatttt 144  Q
    | ||||||||||| || ||||||||||    
T  27571887 ggagcttttgattctagaattgatttt 27571913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 40491684 - 40491748
Alignment:
Q  187 tcactttactttcaactcacttttaatgggaattaattttccagaatcaagtcactcaaaatcaa 251  Q
    ||||||||| ||||||||||||||| |   ||| |||||| ||||||||| ||||||||||||||    
T  40491684 tcactttaccttcaactcacttttagtcaaaatcaattttacagaatcaattcactcaaaatcaa 40491748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 45004992 - 45005068
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgat 141  Q
    |||| ||||||||||||||||| || || |||||||||||||||||| ||  || ||  |||||||||| |||||||    
T  45004992 tcgaatagaattgattttgccttcagaattgattctacttgaagctaaaaattggaggctttgattatagaattgat 45005068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 15903635 - 15903580
Alignment:
Q  73 aattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttga 128  Q
    |||||||||||||||||||| ||||| ||||||||| | | || ||||||||||||    
T  15903635 aattgattttgcctccaaaattgattatacttgaagttgggatttgtagcttttga 15903580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 22195836 - 22195915
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||||||| || |  ||||| ||||| ||||| ||||||  || |||| ||||||||| |||||||||||||    
T  22195836 tcgagtagaattgattatgtcctcaaaattgattttactttaagctatgatttgtaacttttgattctaaaattgatttt 22195915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 31625398 - 31625474
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||||||| |||   || |||||||  || ||||||| || |||||| |||| ||||||||||||||||    
T  31625398 agtagaattgattttgtctcttgaattgattctcattaaagctaggatttgtagcctttggttataaaattgatttt 31625474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 35772235 - 35772331
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaa 166  Q
    |||||||| || || |||||||| | ||||||||| ||  ||  || ||||| |||||||| || |||||||||| | | |||||||||||||||||    
T  35772235 tagaattggttctgtctccaaaatttattctacttaaaattaagatttgtagtttttgattttagaattgattttcacaaataaatttataattcaa 35772331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 38123750 - 38123698
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||||||||||||||||||||  |||||||| | ||| || ||||||||||||    
T  38123750 tgattctacttgaagctagaaattgtagcttctaattctagaattgattttta 38123698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 6021761 - 6021857
Alignment:
Q  50 caagttttattgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||| |||||| || |||||||||||||||||||| | ||  |||||||||||||||||| || |||||||||||||| || ||| ||||||||    
T  6021761 caagtttgattgatttcaagtagaattgattttgcctctagaatcgattctacttgaagctaggatatgtagcttttgattctataatagattttta 6021857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 28084001 - 28083920
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||||||||| || |  || |||||||||||||||||||||| |||||||||||||| || |||| |||||||    
T  28084001 tcgagtagaattgattttgtcttcgtaattgattctacttgaagctagaatttgtagcttttgattctataattaattttta 28083920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 11049252 - 11049332
Alignment:
Q  95 gattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||||| | | ||||||||| ||||| ||| ||||    
T  11049252 gattctacttgaagctaggatttgtagcttttgattctaaaattgatttttacacacaaatttatagttcaagtcactttt 11049332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 1514326 - 1514425
Alignment:
Q  76 tgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    ||||| || |||||||| | ||||||||||||||||| || |||||||||| |||||| |||||||||||| | | ||||||||  ||||||||| ||||    
T  1514326 tgattctgtctccaaaatttattctacttgaagctaggatttgtagctttttattatataattgatttttacacacaaatttattgttcaactcattttt 1514425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 48549110 - 48549044
Alignment:
Q  80 tttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||| |||||||||||||||||||||  |||||||| ||||| || ||||||||||||    
T  48549110 tttgcctccaaaattgattctacttgaagctagaaattgtagcttctgattctagaattgattttta 48549044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 31362310 - 31362228
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaat 155  Q
    ||||||||||||||||||||| || |||||||    |||| |||||| |||||||||||||| || |||||||||||||| ||||||    
T  31362310 gtagaattgattttgcctccataattgattct----gaagttagaatttgtagcttttgattctagaattgatttttataaataaat 31362228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 7524120 - 7524195
Alignment:
Q  100 tacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    ||||||||| ||| || ||||||||||||||||| |||||||||||| | | ||||||||| ||||||||| ||||    
T  7524120 tacttgaagttaggatttgtagcttttgattatagaattgatttttacacacaaatttatagttcaactcactttt 7524195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 47322019 - 47321910
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattc 164  Q
    |||||||||||||||| ||| || | || ||||| |||||||||||||||| || || |||| ||| || |||||||||| ||| | ||||||||| |||    
T  47322019 tcgagtagaattgattctgcttctataattgattatacttgaagctagaatttgcag-ttttaattctagaattgattttcatacacaaatttatagttc 47321921  T
Q  165 aactcagtttt 175  Q
    || ||| ||||    
T  47321920 aattcactttt 47321910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 3016163 - 3016244
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    ||||||||||||||  |||||| |||||||||||||| || ||||||| |||| | |||||||||   ||||||||| ||||    
T  3016163 tgattctacttgaacttagaatttgtagcttttgattctagaattgatgtttacacataaatttacggttcaactcactttt 3016244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 10325043 - 10324970
Alignment:
Q  73 aattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||| |||||||||| | || ||| ||||||||||| |||||  |||||||||||||| || ||||||||||||    
T  10325043 aattaattttgcctctagaattgagtctacttgaagatagaaattgtagcttttgattctataattgattttta 10324970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 2099811 - 2099690
Alignment:
Q  53 gttttattgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagata 152  Q
    |||| |||||| |||||||||||||||| |  ||||| || ||||| || ||||||||   || ||||| ||||| ||||| |||||||||| | | |||    
T  2099811 gtttgattgatgtcgagtagaattgattgt--ctccagaattgattgtaattgaagctgagatttgtagattttggttatagaattgattttcacacata 2099714  T
Q  153 aatttataattcaactcagttttt 176  Q
    ||||||||  |||||||| |||||    
T  2099713 aatttatagctcaactcatttttt 2099690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 3515820 - 3515871
Alignment:
Q  95 gattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||||||||||  |||||||||| ||| || ||||||||||||    
T  3515820 gattctacttgaagctagaaattgtagcttttcattctagaattgattttta 3515871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 35961371 - 35961450
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    ||||||||||||||| | |||| ||||||||||| || ||||  ||| ||||||| | ||||||| ||||||||||| ||||    
T  35961371 tgattctacttgaagtttgaatttgtagcttttggttgtaaa--tgagttttatacacaaatttaaaattcaactcactttt 35961450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 51500939 - 51500866
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||||| |||||||      ||||||||||| |||| || |||||||||||||| || ||||||||||||    
T  51500939 agtagaattgattttacctccaag-----ttctacttgaacctaggatttgtagcttttgattctagaattgattttta 51500866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 30850483 - 30850402
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    |||||||||||||| |||| || ||||| |||| ||| || |||||||||| | | | ||||||||| ||||||||| ||||    
T  30850483 tgattctacttgaaactaggatttgtagtttttaattttagaattgattttaacatacaaatttatagttcaactcactttt 30850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 33693029 - 33693074
Alignment:
Q  101 acttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||||  |||||||||||||| || ||||||||||||    
T  33693029 acttgaagctagaaattgtagcttttgattctataattgattttta 33693074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 47892499 - 47892422
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||||||| |  | | || ||||||||||| |||||||||  || ||||||||||| || ||||||||||    
T  47892499 gagtagaattgatttttcacctagaactgattctacttaaagctagaaattgaagcttttgattctagaattgatttt 47892422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 5268194 - 5268246
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattct-acttgaagctagaatctgta 120  Q
    |||||||| ||||||||||||||| ||||||| ||| ||||||||||| ||||    
T  5268194 gtagaattaattttgcctccaaaattgattctaactcgaagctagaatttgta 5268246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 50569754 - 50569646
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaa 166  Q
    |||||||||||||||| |||| |||| | || || |||||| |||| ||||||| ||||||| | || |||||| ||| | | | ||||||||| |||||    
T  50569754 gagtagaattgattttacctcaaaaattaatgctgcttgaaactaggatctgtaacttttgaatctataattgaatttcacaaacaaatttatagttcaa 50569655  T
Q  167 ctcagtttt 175  Q
      |||||||    
T  50569654 tccagtttt 50569646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 2002805 - 2002727
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||||||||||||||||||||| |  ||||||||||||||||||| || ||||| |||| ||| |||||||||||||||    
T  2002805 agtagaattgattttgcctccagacctgattctacttgaagctaggatttgtagtttttcattctaaaattgattttta 2002727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 10644575 - 10644685
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattc 164  Q
    |||||||||||||||| ||||||||||| | ||||||||||||| ||  || ||||| |||| |||||| |||| | ||| ||| ||||||||||| |||    
T  10644575 tcgagtagaattgattctgcctccaaaatttattctacttgaagttaagatttgtagtttttcattatagaattaactttcatacataaatttatagttc 10644674  T
Q  165 aactcagtttt 175  Q
    |||||| ||||    
T  10644675 aactcactttt 10644685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 33019269 - 33019159
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattc 164  Q
    ||||||| |||||||| |||||| | || ||||| || ||||||||||||| ||||||||||| || || |||||||||| | | ||||||||||| |||    
T  33019269 tcgagtataattgattctgcctctagaattgattatatttgaagctagaatttgtagcttttggttttagaattgattttcacacataaatttatagttc 33019170  T
Q  165 aactcagtttt 175  Q
    |||||| ||||    
T  33019169 aactcactttt 33019159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 30503174 - 30503291
Alignment:
Q  58 attgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaattt 157  Q
    |||||| || || |||| ||||||||||||||||| |||||||||||||||| || ||  |||||||||||||  | |||||||||||| | || |||||    
T  30503174 attgatttcaagaagaaatgattttgcctccaaaattgattctacttgaagccaggattcgtagcttttgattcaagaattgatttttacacatgaattt 30503273  T
Q  158 ataattcaactcagtttt 175  Q
    | | || |||||| ||||    
T  30503274 aaacttgaactcattttt 30503291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 5533113 - 5533039
Alignment:
Q  96 attctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactca 170  Q
    ||||||||||||||||  || |||||||||||||| | ||||||||||  | | |||||||||||||||||||||    
T  5533113 attctacttgaagctactatttgtagcttttgattcttaaattgatttaaacacataaatttataattcaactca 5533039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 31453357 - 31453434
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||| |||||||||| | || |||||||||||||||||| ||| |||  ||||||||| | |||||||||||    
T  31453357 gagtagaatttattttgcctctataattgattctacttgaagctaaaatttgttccttttgattctgaaattgatttt 31453434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 42982523 - 42982610
Alignment:
Q  74 attgattttgcctccaaaaat--gattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttat 159  Q
    |||||||||||||||| || |  ||||||||||||||||||||  ||||||||||||||  | |||||||||||| | | ||||||||    
T  42982523 attgattttgcctccagaattttgattctacttgaagctagaaattgtagcttttgattccagaattgatttttacacacaaatttat 42982610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 42740968 - 42741030
Alignment:
Q  84 cctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||||| || ||||||||||||||||||  || |||||||||||||| || ||||||||||||    
T  42740968 cctccataattgattctacttgaagctaagatttgtagcttttgattctagaattgattttta 42741030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 22535973 - 22536050
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttt 145  Q
    |||||||||||||||||||  | || ||||||||||||||  |||||| || ||||||||||| || |||| ||||||    
T  22535973 agtagaattgattttgcctttagaattgattctacttgaatttagaatttgaagcttttgattttagaattaattttt 22536050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 17281416 - 17281484
Alignment:
Q  100 tacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaact 168  Q
    ||||||||||||  ||||||||||||  ||| ||||||||||||| ||| | |||||||||||| ||||    
T  17281416 tacttgaagctactatctgtagctttcaattttaaaattgattttaatacacaaatttataattgaact 17281484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 17505268 - 17505211
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagctttt 126  Q
    ||||||||||||||||||||| |||| ||||   ||||||||||||||||||||| ||||    
T  17505268 gagtagaattgattttgcctctaaaattgat--aacttgaagctagaatctgtagttttt 17505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 32596009 - 32596073
Alignment:
Q  111 agaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    ||||| |||| ||||||||| ||||||||||||||| | | ||||| ||||||||||||| ||||    
T  32596009 agaatttgtaacttttgattctaaaattgatttttacatacaaattcataattcaactcactttt 32596073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 11510925 - 11510976
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattcta-cttgaagctagaat 115  Q
    ||||||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  11510925 tcgagtagaattgattttgcctccatatttgattctatcttgaagctagaat 11510976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 12037062 - 12037137
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactc 169  Q
    |||||||| ||||| ||| ||| |||||||||||||| || |||||||||| ||| | ||||||||  ||||||||    
T  12037062 tgattctagttgaaactaaaatttgtagcttttgattctacaattgattttcataaacaaatttatggttcaactc 12037137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 16518758 - 16518860
Alignment:
Q  72 gaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcag 171  Q
    |||||| |||||| |||| || |||||||||| |||| ||| || |||||||||||||||||| | ||| |||||   | ||||||||| |||||||||     
T  16518758 gaattggttttgcttccagaattgattctactagaagataggatttgtagcttttgattataaga-tgacttttacgcacaaatttatagttcaactcac 16518856  T
Q  172 tttt 175  Q
    ||||    
T  16518857 tttt 16518860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 37420308 - 37420198
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgat--tataaaattgatttttatagataaatttataattc 164  Q
    ||||||||||||||||||||| | || |||||||||| ||| ||||||  |||||||| | ||  | || |||||||||||| |   |||||||| ||||    
T  37420308 gagtagaattgattttgcctctagaattgattctactagaatctagaaaatgtagcttctaattctctagaattgatttttacactcaaatttattattc 37420209  T
Q  165 aactcagtttt 175  Q
    |||||| ||||    
T  37420208 aactcactttt 37420198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 680390 - 680344
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagcta 111  Q
    |||| ||||| |||||||||||||| || ||||||||||||||||||    
T  680390 tcgaatagaactgattttgcctccagaattgattctacttgaagcta 680344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 21659694 - 21659772
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||| ||||||||||||||||| || || ||||||| | ||||| ||  |||||||| ||||| || ||||||||||||    
T  21659694 agtaaaattgattttgcctccataattgtttctactcgtagctaaaaattgtagcttatgattctagaattgattttta 21659772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 26032160 - 26032038
Alignment:
Q  53 gttttattgatatcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagata 152  Q
    ||||||||| | || |||| |||||||| | |||  | || ||||| ||||||||| |||||| |||| | ||||||| | ||||||| || || | |||    
T  26032160 gttttattgctctcaagtataattgattctacctttagaattgattatacttgaagttagaatttgtatcatttgattcttaaattgacttgtacacata 26032061  T
Q  153 aatttataattcaactcagtttt 175  Q
    |||||||| ||||||||| ||||    
T  26032060 aatttatacttcaactcactttt 26032038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 43501126 - 43501205
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    |||||||||||||| |||| || |||||||||||||| || |||||||| |   | | ||| ||||||||||||||||||||    
T  43501126 tgattctacttgaaactaggatttgtagcttttgattttagaattgattct--aacacaaaattataattcaactcagtttt 43501205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 1976975 - 1976899
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttt 145  Q
    |||||||||||||||| |||||||| ||||||||||  || ||||||| |||| ||| | ||| || |||||||||||    
T  1976975 agtagaattgattttgtctccaaaattgattctactataaactagaat-tgtaacttctaattctagaattgattttt 1976899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 21234609 - 21234576
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttg 127  Q
    |||||||||||||||||||||| |||||||||||    
T  21234609 tgattctacttgaagctagaatttgtagcttttg 21234576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 37745984 - 37745907
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||| ||||||||||| || |||| |||||| ||| || ||| | |||||||| |||  ||||||||||||||    
T  37745984 gtagaattgtttttgcctccacaactgatcctactttaagttaaaatttctagctttttattccaaaattgattttta 37745907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 10619047 - 10618975
Alignment:
Q  72 gaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||||||  | || |||||||| ||||||||||||  |  ||||||||||| || ||||||||||    
T  10619047 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 10618975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 36987223 - 36987163
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattct-acttgaagctagaatctgtagctttt 126  Q
    ||||| |||||||||||| |||| |||||||||| |||||||| |||||| | ||||||||    
T  36987223 gagtataattgattttgcttccagaaatgattctaacttgaagttagaatttatagctttt 36987163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 9818717 - 9818817
Alignment:
Q  76 tgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattga-tttttatagataaatttataattcaactcagttt 174  Q
    |||||||||||||| || ||||||||||||||||||  || |||||||||||||| || |||||| |||||| | | ||||||||| ||||||||| |||    
T  9818717 tgattttgcctccataattgattctacttgaagctatgatttgtagcttttgattctagaattgattttttaaacacaaatttatagttcaactcacttt 9818816  T
Q  175 t 175  Q
    |    
T  9818817 t 9818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 6951389 - 6951308
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    ||||||||||||||| ||| || |||||||||||||| || ||||||||| || | ||||||||||||||||| ||| ||||    
T  6951389 tgattctacttgaagttaggatttgtagcttttgattctataattgatttgtacacataaatttataattcaattcactttt 6951308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 42439726 - 42439649
Alignment:
Q  70 tagaattgattttgcctccaaaaatgattcta-cttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||| | ||||  |||||||||    
T  42439726 tagaattgatttttcctccagaattgattctaacttgaagctagaatctgtagcttttgagtctaaacgtgattttta 42439649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 36639911 - 36639990
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||  |||||||| | ||| || ||||| ||||||    
T  36639911 gagtagaattgattttgcctccaaaatagattctacttgaagctggaaattgtagcttctaattctagaattgtttttta 36639990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 34250462 - 34250385
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||||| |||||| | || ||||||||||||| |||||||  |||||||||||||| || ||||| ||||    
T  34250462 gagtagaattgattatgcctctagaattgattctacttgatgctagaaattgtagcttttgattctacaattgttttt 34250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 11648054 - 11648133
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||| ||| ||| |  |||| ||||||||||||||||||  || ||||  ||||||||||||||||||||||    
T  11648054 tcgagtagaatttattatgcatttaaaattgattctacttgaagctaagatttgtacattttgattataaaattgatttt 11648133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 15368376 - 15368455
Alignment:
Q  96 attctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    ||||||||||||||||  |  |||| |||||||||||| |||||||| | | | | ||||||||||||||||||||||||    
T  15368376 attctacttgaagctactagttgtaacttttgattatagaattgattctaacacacaaatttataattcaactcagtttt 15368455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 18851166 - 18851116
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    ||||||||||||||||||  || ||||||||||||||||| ||||||||||    
T  18851166 tgattctacttgaagctatgatttgtagcttttgattatagaattgatttt 18851116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 31906239 - 31906341
Alignment:
Q  73 aattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagt 172  Q
    ||||| |||| |||| | || ||||| ||||||||||||  || |||| |||||||||||| ||||||| |||  | ||||||||||| ||||||||| |    
T  31906239 aattgtttttacctctataattgattttacttgaagctatgatttgtaacttttgattatataattgatattttcatataaatttatagttcaactcact 31906338  T
Q  173 ttt 175  Q
    |||    
T  31906339 ttt 31906341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 39097247 - 39097320
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaac 167  Q
    |||||||||||||||||| ||| |||| ||||| |||||| |||||||||| | | ||||||||| | ||||||    
T  39097247 tgattctacttgaagctaaaatttgtaacttttaattatataattgattttcacacataaatttaaagttcaac 39097320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 7035105 - 7035045
Alignment:
Q  191 tttactttcaactcacttttaatgggaattaattttccagaatcaagtcactcaaaatcaa 251  Q
    |||||||| |||||| |||||||  |||||||||||||| ||| || ||||||||||||||    
T  7035105 tttacttttaactcaattttaatcagaattaattttccacaataaaatcactcaaaatcaa 7035045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 22572480 - 22572412
Alignment:
Q  102 cttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactca 170  Q
    ||||||||| | || ||||||||||||||||| |||||| ||||||| | ||||||||| || ||||||    
T  22572480 cttgaagctgggatttgtagcttttgattatagaattgaattttataaacaaatttatagtttaactca 22572412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 38845436 - 38845494
Alignment:
Q  86 tccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    ||||||| ||||||||||||||||||  || ||||| |||||||| || ||||||||||    
T  38845436 tccaaaattgattctacttgaagctaagatttgtagtttttgattctagaattgatttt 38845494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 13171866 - 13171758
Alignment:
Q  73 aattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttt-atagataaatttataattcaactcag 171  Q
    |||||||| ||||||||||| |||||||||||||||  |  || ||||  |||||||| || || |||||||| ||| | ||||||||| || ||||||     
T  13171866 aattgattctgcctccaaaattgattctacttgaagaaaagatttgtaaattttgattctataaatgatttttcatacaaaaatttatagttaaactcaa 13171767  T
Q  172 tttttcaaa 180  Q
    |||| ||||    
T  13171766 ttttacaaa 13171758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 33608478 - 33608586
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattcta-cttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaa 166  Q
    |||||||||| ||||||||  | || |||||||| |||||||||||||  || || |||| ||| || ||| |||||||| || |||||| ||| |||||    
T  33608478 agtagaattggttttgccttgagaattgattctaacttgaagctagaagttggagtttttcattctagaatggatttttacagttaaattcatagttcaa 33608577  T
Q  167 ctcagtttt 175  Q
    |||| ||||    
T  33608578 ctcactttt 33608586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 7717432 - 7717369
Alignment:
Q  67 gagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgatt 130  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||  |||||||| |||||    
T  7717432 gagtagaattgattttgcctccagaattgattctacttgaagctagaaattgtagcttctgatt 7717369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 44771670 - 44771747
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||| ||||||||||  || ||||||||| | || ||||||| |||||||||||||| |||||||||||||||    
T  44771670 gtagaattggttttgcctccggaattgattctacctaaatctagaatttgtagcttttgattctaaaattgattttta 44771747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 54596793 - 54596869
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    ||||||||||||| ||||||||||||||||| || |||||| |||||| |||| ||||| ||| || ||||||||||    
T  54596793 agtagaattgattctgcctccaaaaatgattttatttgaagttagaatttgtaacttttaattttagaattgatttt 54596869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 35058333 - 35058412
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    ||||||||||||||||||||||| | || |||||||||||| ||||||||  |  ||||||||||| || ||||||||||    
T  35058333 tcgagtagaattgattttgcctcaagaattgattctacttggagctagaaattcgagcttttgattctagaattgatttt 35058412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 35264518 - 35264445
Alignment:
Q  71 agaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||  |  ||||||||||| || ||||||||||    
T  35264518 agaattgattctgcctccaaatatgattctacttgaaactagaaattagagcttttgattctagaattgatttt 35264445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 25359679 - 25359608
Alignment:
Q  73 aattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||| |||||||| || ||||||||||||||| |||||| ||||| |||| ||| || ||||||||||    
T  25359679 aattgattctgcctccagaattgattctacttgaagttagaatttgtagttttttattctataattgatttt 25359608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 41115472 - 41115413
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttg 127  Q
    ||||||||||||||||| |  | || |||||||||||||||||||||| |||||||||||    
T  41115472 agtagaattgattttgcttgtagaattgattctacttgaagctagaatttgtagcttttg 41115413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 5406881 - 5406959
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    |||| ||||||||||||||| | ||  ||||||||| ||||||||||   ||||||| |||||||| ||||||||||||    
T  5406881 agtataattgattttgcctctagaatggattctactcgaagctagaaatggtagcttctgattatagaattgattttta 5406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 32523454 - 32523372
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttg-aagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||| ||| ||||||||||||| || |  ||||||||| ||| ||| || |||||||||||||| |||||||||||||||    
T  32523454 tcgagtaaaatagattttgcctccataattatttctacttggaagttaggatttgtagcttttgattctaaaattgattttta 32523372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 30301108 - 30301063
Alignment:
Q  69 gtagaattgattttgcctccaaaaatgattctacttgaagctagaa 114  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||    
T  30301108 gtagaattgattttgcctccaaaattgactctatttgaagctagaa 30301063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 40736650 - 40736585
Alignment:
Q  65 tcgagtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgatt 130  Q
    ||||||| |||||||||||| ||| ||| |||||||||||||| ||| ||| ||| ||||||||||    
T  40736650 tcgagtaaaattgattttgcatccgaaattgattctacttgaaactataatttgtcgcttttgatt 40736585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 48410970 - 48410891
Alignment:
Q  23 ttgattctaaaggtgtggaattgattccaag---ttttattgatatcgagtagaattgattttgcctccaaaaatgattc 99  Q
    ||||||||| | |||||||||||||||  ||   ||| |||| | |||||||||||||||||||||||||||| ||||||    
T  48410970 ttgattctataagtgtggaattgattctgagatgtttgattgctttcgagtagaattgattttgcctccaaaattgattc 48410891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 35264390 - 35264326
Alignment:
Q  187 tcactttactttcaactcacttttaatgggaattaattttccagaatcaagtcactcaaaatcaa 251  Q
    ||||||||||||||||||||||||  |   ||| |||||| ||||||||| ||||||||||||||    
T  35264390 tcactttactttcaactcacttttggttacaatcaattttacagaatcaattcactcaaaatcaa 35264326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 42375528 - 42375580
Alignment:
Q  96 attctacttgaagctagaatctgtagcttttgattataaaattgatttttata 148  Q
    |||||||||||||||| ||| |||||| |||||| ||| ||||||||||||||    
T  42375528 attctacttgaagctataatttgtagcgtttgatcatagaattgatttttata 42375580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 42404242 - 42404294
Alignment:
Q  96 attctacttgaagctagaatctgtagcttttgattataaaattgatttttata 148  Q
    |||||||||||||||| ||| |||||| |||||| ||| ||||||||||||||    
T  42404242 attctacttgaagctataatttgtagcgtttgatcatagaattgatttttata 42404294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 39256650 - 39256729
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattct-acttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||| |||| |||||||| || |||| ||||||||  |||| ||| ||||||| ||| |||||||||||||||    
T  39256650 agtagaattgactttgactccaaaattgtttctgacttgaaggaagaaactggagcttttaattctaaaattgattttta 39256729  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 52364055 - 52364133
Alignment:
Q  97 ttctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcagtttt 175  Q
    |||||||||||||||  || | |||||||||||| || |||||||||| | | ||||||||| | ||||||||| ||||    
T  52364055 ttctacttgaagctatgatttatagcttttgattctataattgattttcaaacataaatttacagttcaactcactttt 52364133  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 4526133 - 4526206
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaac 167  Q
    |||||||| ||| | ||| ||| |||| ||||||||| ||||||||||||||| | | ||||||||| ||||||    
T  4526133 tgattctatttgtacctataatttgtaacttttgattttaaaattgatttttacacacaaatttatagttcaac 4526206  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 37335139 - 37335066
Alignment:
Q  73 aattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgattttta 146  Q
    ||||||||||||||| | || ||||| |||| |||| |||||   ||||||||||||| || ||||||||||||    
T  37335139 aattgattttgcctcgagaattgattttactagaagttagaaatcgtagcttttgattctagaattgattttta 37335066  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 40147934 - 40147885
Alignment:
Q  94 tgattctacttgaagctagaatctgtagcttttgattataaaattgattt 143  Q
    ||||||||||| |||||||||| || ||||||||||| || |||||||||    
T  40147934 tgattctacttcaagctagaatttggagcttttgattctagaattgattt 40147885  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 4401472 - 4401416
Alignment:
Q  112 gaatctgtagcttttgattataaaattgatttttatagataaatttataattcaact 168  Q
    |||| |||||||||||||| |||| |||||||||| | |  ||||||||||||||||    
T  4401472 gaatttgtagcttttgattttaaagttgatttttacacaccaatttataattcaact 4401416  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 36302158 - 36302234
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    ||||||||||||||||||| || |  |||||||| |||||||||||   || || |||||||| || ||||||||||    
T  36302158 agtagaattgattttgccttcagagttgattctatttgaagctagagattggagattttgattttagaattgatttt 36302234  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 38022410 - 38022454
Alignment:
Q  68 agtagaattgatttt-gcctccaaaaatgattctacttgaagcta 111  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  38022410 agtagaattgatttttgcctccaaaattgattctacctgaagcta 38022454  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 44958712 - 44958640
Alignment:
Q  72 gaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttt 144  Q
    |||||||||||||||||| |  |||||||||| || |||||||  || ||||||||||| || || |||||||    
T  44958712 gaattgattttgcctccagagttgattctactcgatgctagaaattggagcttttgattctagaaatgatttt 44958640  T

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Target: scaffold0393 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 12417 - 12373
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattct-acttgaagcta 111  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  12417 agtagaattgattttgcctccagaaatgattctaacttgaagcta 12373  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 23699 - 23596
Alignment:
Q  72 gaattgattttgcctccaaaaatgattctacttgaagctagaatctgtagcttttgattataaaattgatttttatagataaatttataattcaactcag 171  Q
    |||||||||||| ||||| |||| ||||||  ||||||||| || |||||||||||| | || |  ||||||||| |   |||||||| ||||||||||     
T  23699 gaattgattttgtctccataaataattctaactgaagctaggatttgtagcttttgaatctagacgtgatttttagactaaaatttatcattcaactcac 23600  T
Q  172 tttt 175  Q
    ||||    
T  23599 tttt 23596  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 14223 - 14146
Alignment:
Q  68 agtagaattgattttgcctccaaaaatgattctacttgaagctag-aatctgtagcttttgattataaaattgattttta 146  Q
    |||||||||||||||| | | | || ||||||||||||||||||| ||||  |||||| ||||| || ||||||||||||    
T  14223 agtagaattgattttgtcacaagaattgattctacttgaagctagcaatc--tagcttatgattctagaattgattttta 14146  T

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