View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9821_high_3 (Length: 546)

Name: NF9821_high_3
Description: NF9821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9821_high_3
NF9821_high_3
[»] chr1 (44 HSPs)
chr1 (235-532)||(15335289-15335574)
chr1 (1-163)||(48072100-48072262)
chr1 (1-167)||(39826123-39826289)
chr1 (3-167)||(17606449-17606613)
chr1 (1-167)||(4907035-4907201)
chr1 (1-167)||(42510087-42510253)
chr1 (1-167)||(43539486-43539652)
chr1 (1-163)||(52058088-52058250)
chr1 (1-167)||(24467767-24467932)
chr1 (1-167)||(39711211-39711377)
chr1 (2-167)||(30299371-30299536)
chr1 (2-167)||(33628763-33628928)
chr1 (1-167)||(39970719-39970884)
chr1 (1-155)||(13229871-13230024)
chr1 (1-167)||(20995808-20995973)
chr1 (1-167)||(8292943-8293112)
chr1 (1-167)||(18462424-18462589)
chr1 (1-167)||(29696703-29696863)
chr1 (44-167)||(34749210-34749333)
chr1 (30-163)||(7473869-7474002)
chr1 (98-167)||(39826286-39826351)
chr1 (97-167)||(4907197-4907267)
chr1 (3-106)||(215046-215149)
chr1 (128-167)||(24467701-24467740)
chr1 (128-167)||(33628956-33628995)
chr1 (101-167)||(17606381-17606447)
chr1 (128-167)||(18462358-18462397)
chr1 (97-167)||(34749340-34749410)
chr1 (128-163)||(52058274-52058309)
chr1 (97-167)||(8292877-8292947)
chr1 (129-167)||(30299304-30299342)
chr1 (97-167)||(39711145-39711215)
chr1 (97-167)||(43539420-43539490)
chr1 (45-81)||(17501993-17502029)
chr1 (118-162)||(42510166-42510210)
chr1 (193-232)||(4906972-4907011)
chr1 (128-167)||(39970911-39970950)
chr1 (193-232)||(48072290-48072329)
chr1 (128-161)||(34749299-34749332)
chr1 (128-161)||(48072144-48072177)
chr1 (45-81)||(18462364-18462400)
chr1 (45-85)||(24467886-24467926)
chr1 (45-85)||(42510093-42510133)
chr1 (45-85)||(52058090-52058130)
[»] chr3 (56 HSPs)
chr3 (1-171)||(45970054-45970224)
chr3 (1-167)||(14262109-14262275)
chr3 (1-167)||(21633035-21633201)
chr3 (1-167)||(14162010-14162176)
chr3 (1-167)||(15328599-15328765)
chr3 (1-167)||(35995751-35995917)
chr3 (6-163)||(43572535-43572692)
chr3 (1-167)||(14171659-14171825)
chr3 (1-167)||(16722130-16722296)
chr3 (1-167)||(19112838-19113004)
chr3 (2-167)||(30500114-30500279)
chr3 (1-157)||(49986667-49986823)
chr3 (1-163)||(4204785-4204947)
chr3 (1-167)||(5800744-5800910)
chr3 (1-167)||(9267048-9267214)
chr3 (2-167)||(38283690-38283855)
chr3 (3-167)||(45003637-45003801)
chr3 (1-167)||(20853769-20853935)
chr3 (1-167)||(33372545-33372709)
chr3 (1-167)||(52552765-52552927)
chr3 (2-159)||(17465449-17465605)
chr3 (1-157)||(47575356-47575511)
chr3 (1-75)||(11003871-11003945)
chr3 (98-167)||(14171822-14171891)
chr3 (98-167)||(33372479-33372548)
chr3 (128-167)||(20853962-20854001)
chr3 (128-167)||(43572462-43572501)
chr3 (97-163)||(14161948-14162014)
chr3 (97-167)||(30500276-30500346)
chr3 (97-167)||(52552923-52552993)
chr3 (128-167)||(11003805-11003844)
chr3 (128-167)||(16722064-16722103)
chr3 (128-167)||(45003569-45003608)
chr3 (97-163)||(5800682-5800748)
chr3 (97-167)||(14262271-14262341)
chr3 (129-167)||(45969988-45970026)
chr3 (129-167)||(49986601-49986639)
chr3 (128-168)||(1068915-1068955)
chr3 (128-164)||(21632972-21633008)
chr3 (45-81)||(32998397-32998433)
chr3 (128-167)||(9267241-9267280)
chr3 (193-232)||(14161881-14161920)
chr3 (128-171)||(17465633-17465676)
chr3 (128-167)||(19113031-19113070)
chr3 (193-232)||(30500369-30500408)
chr3 (193-232)||(45969925-45969964)
chr3 (97-167)||(47575507-47575577)
chr3 (193-239)||(52553017-52553064)
chr3 (128-162)||(16722173-16722207)
chr3 (194-232)||(17465697-17465735)
chr3 (129-167)||(17649277-17649315)
chr3 (193-246)||(19112759-19112813)
chr3 (128-162)||(49986710-49986744)
chr3 (128-165)||(35995944-35995981)
chr3 (45-85)||(4204787-4204827)
chr3 (45-85)||(43572650-43572690)
[»] chr4 (50 HSPs)
chr4 (1-232)||(15640854-15641084)
chr4 (1-167)||(9396838-9397004)
chr4 (2-167)||(9516683-9516848)
chr4 (1-167)||(7819153-7819319)
chr4 (1-167)||(37012780-37012946)
chr4 (1-167)||(46046497-46046663)
chr4 (1-157)||(13132024-13132180)
chr4 (1-167)||(4356020-4356186)
chr4 (1-167)||(34064055-34064221)
chr4 (1-167)||(38574041-38574207)
chr4 (1-165)||(3018151-3018315)
chr4 (2-167)||(31090134-31090299)
chr4 (9-167)||(9619126-9619284)
chr4 (1-167)||(18667428-18667594)
chr4 (1-167)||(3273761-3273925)
chr4 (1-167)||(31944089-31944255)
chr4 (1-167)||(48579939-48580105)
chr4 (45-232)||(26252419-26252605)
chr4 (12-167)||(48259901-48260056)
chr4 (1-167)||(18713099-18713265)
chr4 (57-171)||(35376322-35376437)
chr4 (98-167)||(7819087-7819156)
chr4 (98-167)||(46046660-46046729)
chr4 (97-167)||(37012942-37013012)
chr4 (97-167)||(3018085-3018155)
chr4 (129-239)||(31943952-31944061)
chr4 (98-167)||(38574204-38574273)
chr4 (128-167)||(9619053-9619092)
chr4 (128-167)||(26252341-26252380)
chr4 (97-167)||(4355954-4356024)
chr4 (97-167)||(18713033-18713103)
chr4 (97-167)||(34064217-34064287)
chr4 (1-49)||(26252407-26252455)
chr4 (128-167)||(3273695-3273734)
chr4 (128-167)||(9516876-9516915)
chr4 (128-167)||(31090327-31090366)
chr4 (97-167)||(9396772-9396842)
chr4 (97-167)||(48580101-48580171)
chr4 (45-81)||(36888943-36888979)
chr4 (45-81)||(43312288-43312324)
chr4 (128-163)||(13132207-13132242)
chr4 (128-167)||(15640788-15640827)
chr4 (97-167)||(35376235-35376305)
chr4 (193-232)||(41946975-41947014)
chr4 (128-171)||(43312278-43312321)
chr4 (128-162)||(9516772-9516806)
chr4 (129-167)||(12904819-12904857)
chr4 (194-232)||(18667620-18667658)
chr4 (121-162)||(31090216-31090257)
chr4 (193-244)||(31218310-31218362)
[»] chr5 (45 HSPs)
chr5 (1-232)||(6817133-6817360)
chr5 (1-163)||(20709289-20709451)
chr5 (1-167)||(7125990-7126156)
chr5 (2-167)||(41001426-41001591)
chr5 (1-167)||(29444945-29445111)
chr5 (3-167)||(993820-993983)
chr5 (1-167)||(14144040-14144206)
chr5 (1-167)||(24650773-24650938)
chr5 (2-167)||(23979042-23979206)
chr5 (1-167)||(4919063-4919229)
chr5 (1-167)||(17762421-17762587)
chr5 (1-167)||(24837242-24837408)
chr5 (1-167)||(31799713-31799879)
chr5 (1-167)||(24074442-24074607)
chr5 (45-167)||(14411848-14411971)
chr5 (45-167)||(18336639-18336761)
chr5 (45-171)||(27159059-27159184)
chr5 (70-167)||(30512360-30512458)
chr5 (70-167)||(30552700-30552798)
chr5 (1-158)||(22571159-22571316)
chr5 (97-167)||(7126152-7126222)
chr5 (1-49)||(27159148-27159196)
chr5 (97-167)||(14143974-14144044)
chr5 (97-167)||(17762355-17762425)
chr5 (101-167)||(20959330-20959396)
chr5 (97-167)||(24074376-24074446)
chr5 (48-85)||(20947016-20947053)
chr5 (1-49)||(14411836-14411884)
chr5 (128-167)||(994012-994051)
chr5 (128-167)||(41001619-41001658)
chr5 (129-167)||(6817388-6817426)
chr5 (97-167)||(14411770-14411840)
chr5 (132-167)||(4919260-4919295)
chr5 (132-167)||(18336541-18336576)
chr5 (193-232)||(24837498-24837537)
chr5 (193-232)||(29445134-29445173)
chr5 (128-162)||(18336638-18336672)
chr5 (97-167)||(20709447-20709517)
chr5 (97-167)||(24650934-24651004)
chr5 (97-167)||(27159192-27159262)
chr5 (97-163)||(29444883-29444949)
chr5 (97-167)||(31799875-31799945)
chr5 (101-163)||(41424593-41424655)
chr5 (44-85)||(41425710-41425751)
chr5 (45-85)||(41424595-41424635)
[»] chr8 (37 HSPs)
chr8 (1-167)||(26136824-26136990)
chr8 (1-165)||(22494523-22494687)
chr8 (1-171)||(7689662-7689832)
chr8 (1-167)||(14767580-14767746)
chr8 (1-158)||(17622969-17623126)
chr8 (1-171)||(2583459-2583629)
chr8 (1-167)||(10108509-10108675)
chr8 (1-167)||(21148010-21148175)
chr8 (1-167)||(30789580-30789746)
chr8 (1-167)||(43851737-43851903)
chr8 (1-163)||(42113061-42113223)
chr8 (1-167)||(42605892-42606058)
chr8 (3-167)||(26532856-26533020)
chr8 (1-167)||(5555008-5555174)
chr8 (1-167)||(14820433-14820599)
chr8 (1-148)||(43481406-43481553)
chr8 (98-167)||(30789743-30789812)
chr8 (97-167)||(10108443-10108513)
chr8 (36-159)||(22848399-22848522)
chr8 (97-167)||(14820367-14820437)
chr8 (97-171)||(43481549-43481623)
chr8 (98-165)||(7689598-7689665)
chr8 (97-167)||(17623122-17623192)
chr8 (97-167)||(2583393-2583463)
chr8 (97-167)||(5554942-5555012)
chr8 (128-167)||(10171409-10171448)
chr8 (193-232)||(17622900-17622939)
chr8 (128-167)||(42605826-42605865)
chr8 (128-162)||(17623049-17623083)
chr8 (97-167)||(21144740-21144810)
chr8 (97-167)||(21148171-21148241)
chr8 (97-167)||(22494458-22494527)
chr8 (193-230)||(26137013-26137050)
chr8 (134-167)||(38726760-38726793)
chr8 (193-230)||(40487743-40487780)
chr8 (49-85)||(21144764-21144800)
chr8 (98-166)||(43851900-43851968)
[»] chr7 (44 HSPs)
chr7 (1-167)||(23704800-23704966)
chr7 (1-167)||(20458764-20458930)
chr7 (1-167)||(12006613-12006779)
chr7 (1-167)||(41600031-41600197)
chr7 (1-167)||(44816908-44817074)
chr7 (1-232)||(38879733-38879963)
chr7 (2-167)||(20419609-20419774)
chr7 (1-167)||(20963568-20963734)
chr7 (1-167)||(23383573-23383739)
chr7 (1-167)||(48672352-48672518)
chr7 (1-167)||(10409513-10409679)
chr7 (1-157)||(31851322-31851478)
chr7 (1-171)||(1250275-1250445)
chr7 (3-157)||(33162676-33162830)
chr7 (1-163)||(7658048-7658208)
chr7 (12-167)||(24194941-24195101)
chr7 (49-167)||(25772436-25772554)
chr7 (45-167)||(48648334-48648456)
chr7 (1-167)||(28218252-28218402)
chr7 (1-85)||(6465993-6466077)
chr7 (98-167)||(12006776-12006845)
chr7 (98-167)||(16995272-16995341)
chr7 (98-167)||(41600194-41600263)
chr7 (98-167)||(48672515-48672584)
chr7 (98-167)||(28218399-28218468)
chr7 (97-167)||(7658204-7658274)
chr7 (97-167)||(38879959-38880029)
chr7 (128-167)||(23704734-23704773)
chr7 (193-232)||(1250535-1250574)
chr7 (128-167)||(20419802-20419841)
chr7 (128-167)||(20458957-20458996)
chr7 (128-167)||(25772597-25772636)
chr7 (97-167)||(1250441-1250511)
chr7 (125-167)||(20963757-20963799)
chr7 (129-167)||(31851506-31851544)
chr7 (97-157)||(6465937-6465997)
chr7 (128-167)||(23383766-23383805)
chr7 (193-232)||(25772660-25772699)
chr7 (128-162)||(23704843-23704877)
chr7 (98-167)||(10409447-10409516)
chr7 (45-81)||(7842518-7842554)
chr7 (193-229)||(20963507-20963543)
chr7 (128-167)||(24194936-24194976)
chr7 (193-252)||(28218167-28218227)
[»] chr2 (38 HSPs)
chr2 (1-167)||(23806091-23806257)
chr2 (1-167)||(26560627-26560793)
chr2 (1-167)||(15106206-15106372)
chr2 (1-167)||(22263264-22263430)
chr2 (1-162)||(39878241-39878402)
chr2 (1-167)||(17463230-17463396)
chr2 (2-232)||(19251610-19251837)
chr2 (1-167)||(20498884-20499050)
chr2 (1-167)||(42670792-42670958)
chr2 (2-164)||(13284484-13284646)
chr2 (45-167)||(30390532-30390654)
chr2 (1-167)||(17850659-17850825)
chr2 (45-167)||(26236278-26236400)
chr2 (1-167)||(33290188-33290354)
chr2 (1-106)||(23854800-23854905)
chr2 (1-167)||(26135956-26136122)
chr2 (64-159)||(13254638-13254733)
chr2 (98-167)||(17850822-17850891)
chr2 (97-167)||(22263426-22263496)
chr2 (97-167)||(26236200-26236270)
chr2 (98-167)||(15106140-15106209)
chr2 (128-167)||(19251543-19251582)
chr2 (128-167)||(26135890-26135929)
chr2 (113-167)||(13284659-13284713)
chr2 (97-167)||(17463164-17463234)
chr2 (97-167)||(23806025-23806095)
chr2 (97-167)||(23854901-23854971)
chr2 (97-158)||(39878184-39878245)
chr2 (97-163)||(42670954-42671020)
chr2 (131-167)||(23854761-23854797)
chr2 (45-84)||(26236355-26236394)
chr2 (97-167)||(26560789-26560859)
chr2 (130-167)||(13254570-13254607)
chr2 (134-163)||(23046784-23046813)
chr2 (134-163)||(44098894-44098923)
chr2 (45-85)||(13284487-13284527)
chr2 (49-85)||(13284667-13284703)
chr2 (1-49)||(26236266-26236313)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-167)||(8462-8627)
[»] scaffold0361 (3 HSPs)
scaffold0361 (1-167)||(4702-4868)
scaffold0361 (128-171)||(4632-4675)
scaffold0361 (128-162)||(4745-4779)
[»] chr6 (32 HSPs)
chr6 (2-167)||(24732078-24732243)
chr6 (1-167)||(9481321-9481487)
chr6 (9-167)||(26385351-26385509)
chr6 (1-167)||(33714560-33714726)
chr6 (1-167)||(30618101-30618266)
chr6 (12-167)||(18500387-18500543)
chr6 (2-163)||(30458978-30459139)
chr6 (7-167)||(14680955-14681115)
chr6 (1-161)||(10321809-10321970)
chr6 (44-157)||(32017619-32017732)
chr6 (1-162)||(2299389-2299548)
chr6 (45-165)||(33637710-33637831)
chr6 (1-113)||(3229990-3230102)
chr6 (93-167)||(9854118-9854192)
chr6 (3-80)||(17142798-17142875)
chr6 (97-171)||(10321966-10322040)
chr6 (128-167)||(19284202-19284241)
chr6 (128-167)||(24732011-24732050)
chr6 (128-167)||(32017770-32017809)
chr6 (133-167)||(2299580-2299614)
chr6 (97-163)||(9481259-9481325)
chr6 (97-167)||(30618035-30618105)
chr6 (130-167)||(9154953-9154990)
chr6 (1-80)||(18500506-18500586)
chr6 (1-49)||(33637698-33637746)
chr6 (129-163)||(17142754-17142788)
chr6 (128-162)||(17142800-17142834)
chr6 (128-162)||(26385440-26385474)
chr6 (97-167)||(33637632-33637702)
chr6 (194-232)||(34884567-34884605)
chr6 (97-157)||(30459136-30459196)
chr6 (1-49)||(32017696-32017743)
[»] scaffold0809 (2 HSPs)
scaffold0809 (2-163)||(1550-1711)
scaffold0809 (97-163)||(1487-1553)
[»] scaffold0185 (2 HSPs)
scaffold0185 (1-163)||(3946-4108)
scaffold0185 (97-157)||(4104-4164)
[»] scaffold0881 (1 HSPs)
scaffold0881 (1-155)||(305-458)
[»] scaffold0477 (2 HSPs)
scaffold0477 (49-167)||(4934-5053)
scaffold0477 (195-239)||(5078-5122)
[»] scaffold0449 (2 HSPs)
scaffold0449 (44-167)||(7299-7427)
scaffold0449 (129-167)||(7466-7504)
[»] scaffold0117 (1 HSPs)
scaffold0117 (96-167)||(12216-12287)
[»] scaffold0176 (2 HSPs)
scaffold0176 (97-167)||(15867-15937)
scaffold0176 (16-76)||(15797-15857)
[»] scaffold0352 (1 HSPs)
scaffold0352 (128-163)||(4744-4779)


Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-125; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 235 - 532
Target Start/End: Original strand, 15335289 - 15335574
Alignment:
Q  235 tttactctatttagtattatctcaatgactatggcatccatgagttttatttaaagggttaatatatgatatatgtgttttcttacactgatcacatatt 334  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||    
T  15335289 tttaatctatttagtattatctcaatgactatggcatccatgagttttatttaaagggttaatat---------gtgttttcttacactgatcacatatt 15335379  T
Q  335 ggtggtaattggtaatttgcgtgaaagatgtaatacacatattttctactacgatcctattaatataatatatgtcggcctttcttcctagtgcaagttc 434  Q
    |||   ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15335380 ggt---aattggtaatttgcgtgaacgatgtactacaaatattttctactacgatcctattaatataatatatgtcggcctttcttcctagtgcaagttc 15335476  T
Q  435 aagaacttttgtctcttttatttttgaaatggaatcttaaatttgcaagtcggtaagtacgtaaagtattttgatttgtgtcaattgattggtaagtg 532  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15335477 tagaagttttgtctcttttatttttgaaatggaatcttaaatttgcaagtcggtaagtacgtaaagtattttgatttgtgtcaattgattggtaagtg 15335574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 48072100 - 48072262
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  48072100 gcataaattacgtccctgtaatttcaaattcctcccacttttgatccctgtaatttcagattcctccacttttggtccctcattttacgtgacatgtatg 48072199  T
Q  101 cagattttgctaacgtggtgaaatggagga-ccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||| |||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  48072200 cagattctgctgacgtggtgaaat-gaggacccaaaagtggaagaatatgaaattacagggaca 48072262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 39826289 - 39826123
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||| ||||||||    
T  39826289 gcatcaattacgtccttgtaattttagattcctcccacttttgatccctgtaatttcatattcctccacttttgatccctcattttacgtgccatgtatg 39826190  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||    
T  39826189 cagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaat 39826123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 17606449 - 17606613
Alignment:
Q  3 ataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgca 102  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||    
T  17606449 ataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgca 17606548  T
Q  103 gattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
     |||||||| |||||||| |||   |||||||||||||||||||||||||||||| |||||||||    
T  17606549 aattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaat 17606613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 4907201 - 4907035
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||    
T  4907201 gcataaattacgtccctgtaatttcagattcctcctacttttggtccctgtaatttcagattcatccacttttagtccctcattttacatgccatgtatg 4907102  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||  ||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  4907101 cagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 4907035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 42510253 - 42510087
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||  ||||||||||| | |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||    
T  42510253 gcataaattacacccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcatttcacgtgccatgtatg 42510154  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| | |||||||||||  |||| |||||||||||||| ||||||||||||||||||||    
T  42510153 cagattctgctgatgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaat 42510087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 43539486 - 43539652
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||| |||| || |||||||||||||||||||||||    
T  43539486 gcataaattacgtccctgtaattttagattcctcccacttttgctccctgtaatttcaaattcctccacttttggtacctcattttacgtgtcatgtatg 43539585  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||  ||| |||||||| |||   ||||||||| ||||||||| |||||||||| |||||||||    
T  43539586 cagattcggctgacgtggtggaataagggaccaaaactggaagaatttgaaattacatggacaaaat 43539652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 52058250 - 52058088
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||||| | |||| | |||||||||||||||| ||| |||||||||| ||| ||||| |||| ||||||||||||||||||||||||||    
T  52058250 gcataaattacgtccctatgatttcagattcctcccacttttggtccttgtaatttcatattactccacttttggtccctcattttacgtgtcatgtatg 52058151  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||| |||| | |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  52058150 cagattctgctgatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggaca 52058088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 24467767 - 24467932
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||  |||||||| | |||||||||||||||| |||||||||||||||||| |||||  ||| |||| |||||||||||| ||||||||    
T  24467767 gcataaattacgtcattgtaatttcatattcctcccacttttggtccctgtaatttcagattactccacatttggtcc-tcattttacgtgccatgtatg 24467865  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| | || |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  24467866 cagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaat 24467932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 39711211 - 39711377
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | ||||||||| |||||| ||||||||||||| |||||||||| |||| ||||||||||||||||| ||||||||    
T  39711211 gcataaattacgtccttgtaatttcatattcctcccgcttttggtccctgtaatttcggattcctccacttttggtccctcattttacgtgccatgtatg 39711310  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || ||| |||| |||||||| ||||  ||||||||||||||||||| ||||||||| ||||||||||    
T  39711311 caaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaat 39711377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 30299371 - 30299536
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    ||||||||||||||||||||||| | |||||||||||||||  | | |||||||||||||||||||| |||| ||||||||||||| ||| |||||||||    
T  30299371 cataaattacgtccctgtaatttcagattcctcccacttttagttcttgtaatttcagattcctccacttttggtccctcattttatgtgccatgtatgc 30299470  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| | || |||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||    
T  30299471 agattcttcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaat 30299536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 33628928 - 33628763
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    ||||||||| ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||    
T  33628928 cataaattatgtccctgtaatttcaaattcctcccgcttttggtccctgtaatttcagattcctctacttttggtccctcattttacgtgccatgtatgc 33628829  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    | ||| |||| | |||||| ||||  |||||||||||| |||||||||||||||| ||||||||||    
T  33628828 aaattctgcttatgtggtggaatgagggaccaaaagtgaaagaatctgaaattacggggacaaaat 33628763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 39970884 - 39970719
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||  ||||||| ||||||| |||||||||||||||| ||  ||||||||||||||| |||| |||| ||||||||||||||||| ||||||||    
T  39970884 gcataaattgtgtccctgaaattttagattcctcccacttttggtca-tgtaatttcagattcatccacttttggtccctcattttacgtgccatgtatg 39970786  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||  ||||||||    
T  39970785 cagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatagacaaaat 39970719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 13229871 - 13230024
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  13229871 gcataaattacgtccctgtaatttcagattcctctcacttttggtcc-tgtaatttcagattcctccacttttggtccctcattttgcgtgtcatgtatg 13229969  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaatta 155  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||  ||||||||    
T  13229970 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaagatgaaatta 13230024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 20995808 - 20995973
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||  |||||||||||||| ||| ||||| |||| |||||||| |||||||| ||||||||    
T  20995808 gcataaattacgtccctgtaatttcagattcctcccacttttcgtccctgtaatttcaaatttctccacttttggtccctca-tttacgtgccatgtatg 20995906  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||| ||||||||||| ||||||||    
T  20995907 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagagacaaaat 20995973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 8292943 - 8293112
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttt---tagtccctcattttacgtgtcatgt 97  Q
    |||||||||||||||||||||||| | |||||||| ||||||| ||| |||||||| ||||||||||| |||   |||||||||||||| | || |||||    
T  8292943 gcataaattacgtccctgtaatttcagattcctcctacttttggtccatgtaattttagattcctccactttaattagtccctcatttttcatgccatgt 8293042  T
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||  ||| || ||||| ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  8293043 atgcagattcggctgacatggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 8293112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 18462424 - 18462589
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||  |||||||| | |||||||||||||||| ||||| |||||||| ||| |||||  ||| |||| ||||||| |||| ||||||||    
T  18462424 gcataaattacgtcattgtaatttcatattcctcccacttttggtccctataatttcatattactccacgtttggtcc-tcattttgcgtgccatgtatg 18462522  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| || | |||||||||||||   |||||||||||||||||||||||||||| ||||||||||    
T  18462523 cagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaat 18462589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 29696703 - 29696863
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||| |||||| |||||| | |||||||||||||| | |||||||| ||||||||||||||| |||| |||||||||||||||     || |||    
T  29696703 gcataaattatgtccctataatttcatattcctcccactttgg-tccctgtattttcagattcctccacttttggtccctcattttacg-----tgcatg 29696796  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  |||||||||||||||||||||||||||||| |||||||||    
T  29696797 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatggacaaaat 29696863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 34749333 - 34749210
Alignment:
Q  44 atccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaag 143  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| || |||||||||| ||| |||| |||||||| ||||  ||||||||||||||||    
T  34749333 atccctgtaatttcagattcctccacttttggtccctcattttacatgccatgtatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaag 34749234  T
Q  144 aatctgaaattacagggacaaaat 167  Q
    ||| ||||||||| ||||||||||    
T  34749233 aatatgaaattacggggacaaaat 34749210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 7474002 - 7473869
Alignment:
Q  30 tcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggagg 129  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||  ||| |||||| ||||| |||||||||||||| |  | |||||||||||||  ||    
T  7474002 tcctcccacttttggtccttgtaatttcagattcctccacttttgatccatcatttcacgtgccatgtatgcagattcttttgacgtggtgaaatgaggg 7473903  T
Q  130 accaaaagtggaagaatctgaaattacagggaca 163  Q
    ||||||||||||||||| ||||||||||| ||||    
T  7473902 accaaaagtggaagaatatgaaattacagagaca 7473869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 39826286 - 39826351
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| ||||| |||||    ||||||||||||||||||||||||||||||||||||||||    
T  39826286 atgcagattttgctgacgtgatgaaa----ggaccaaaagtggaagaatctgaaattacagggacaaaat 39826351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 4907197 - 4907267
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| | || ||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  4907197 tatgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaat 4907267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 215149 - 215046
Alignment:
Q  3 ataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgca 102  Q
    ||||||||||||  |||||||| | ||| ||| |||||| | ||| |||||||| ||||||||||| |||| |||  |||||| ||||||||| ||||||    
T  215149 ataaattacgtcattgtaatttcagatttctctcactttcggtccgtgtaatttaagattcctccacttttggtcattcatttcacgtgtcatatatgca 215050  T
Q  103 gatt 106  Q
    ||||    
T  215049 gatt 215046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 24467740 - 24467701
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24467740 ggaccaaaagtggaagaatctgaaattacagggacaaaat 24467701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 33628956 - 33628995
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33628956 ggaccaaaagtggaagaatctgaaattacagggacaaaat 33628995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 17606447 - 17606381
Alignment:
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| ||||| |||||||  ||||||||||||||||||| |||||||||||| |||||||    
T  17606447 cagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaat 17606381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 18462397 - 18462358
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  18462397 ggaccaaaaatggaagaatctgaaattacagggacaaaat 18462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 34749340 - 34749410
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggagg-accaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| | ||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  34749340 tatgcagattctgctgacgtgattaaa-ggaggtaccaaaagtggaagaatctgaaattacagggataaaat 34749410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 52058274 - 52058309
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    ||||||||||||||||||||||||||||||||||||    
T  52058274 ggaccaaaagtggaagaatctgaaattacagggaca 52058309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 8292947 - 8292877
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  | ||||||||||||||||| ||||||| ||||||||||||    
T  8292947 tatgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaat 8292877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 30299342 - 30299304
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  30299342 gaccaaaagtggaagaatatgaaattacagggacaaaat 30299304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 39711215 - 39711145
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| | ||| |  ||||||||||||||||||| |||||||||| |||||||||    
T  39711215 tatgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatgaaattacaaggacaaaat 39711145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 43539490 - 43539420
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||| ||| | ||||||||||||||||||    
T  43539490 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaat 43539420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 17502029 - 17501993
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctc 81  Q
    |||||||||||||||||||||||| ||||||||||||    
T  17502029 tccctgtaatttcagattcctccacttttagtccctc 17501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 42510166 - 42510210
Alignment:
Q  118 gtgaaatggaggaccaaaagtggaagaatctgaaattacagggac 162  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||    
T  42510166 gtgaaatgagggaccaaaagtggaggaatctgaaattacagggac 42510210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 4907011 - 4906972
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  4907011 ctaaaactagaattcactaatattacagggacgaaaagag 4906972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 39970911 - 39970950
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  39970911 ggaccaaaagtggaaggatctaaaattacagggacaaaat 39970950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 48072290 - 48072329
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  48072290 ctaaaaccggaattcactaatattacaatgacgaaaagag 48072329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 34749299 - 34749332
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacaggga 161  Q
    |||||||||||||| |||||||||||||||||||    
T  34749299 ggaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 48072177 - 48072144
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacaggga 161  Q
    |||||||||||||| |||||||||||||||||||    
T  48072177 ggaccaaaagtggaggaatctgaaattacaggga 48072144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 18462364 - 18462400
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctc 81  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  18462364 tccctgtaatttcagattcttccatttttggtccctc 18462400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 24467926 - 24467886
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    ||||||||||||||||||| |||| |||| |||||||||||    
T  24467926 tccctgtaatttcagattcttccacttttggtccctcattt 24467886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 42510093 - 42510133
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    |||||||||||||| |||| |||| ||||||||||||||||    
T  42510093 tccctgtaatttcatattcttccacttttagtccctcattt 42510133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 52058090 - 52058130
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    ||||||||||||||||||| |||| |||| |||||||||||    
T  52058090 tccctgtaatttcagattcttccacttttggtccctcattt 52058130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 6e-63; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 45970054 - 45970224
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  45970054 gcataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcagatttctccacttttggtccctcattttacgtgtcatgtatg 45970153  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    | |||| |||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  45970154 cggattctgcttacgtggtggaatggggaaccaaaagtggaagaatctgaaattacagggacaaaatttaa 45970224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 14262275 - 14262109
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  14262275 gcataaattacgtccctgtaattttagattccttccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 14262176  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| | |||||| |||   ||||||||||||||||||||||||||||||||||||||||    
T  14262175 cagattctgctgatgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaat 14262109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 21633035 - 21633201
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||| ||| ||||||||    
T  21633035 gcataaattacgtccctgtaatttcagattcctcccacttttggtccttgtaatttcagattcctccacttttggtccctcattttatgtgccatgtatg 21633134  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| | || |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  21633135 cagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaat 21633201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 14162010 - 14162176
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  14162010 gcataaattacgtccctgtaatttcagattcctcctaattttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgtatg 14162109  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || |||||||| |||||||| |||   |||||||||||||||||||||||||||||| |||||||||    
T  14162110 caaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaat 14162176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 15328599 - 15328765
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||| |||| ||| ||||||||||||||||| ||||    
T  15328599 gcataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattcctccacttttggtctctcattttacgtgtcatatatg 15328698  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||| ||||||||||||||||||||||||    
T  15328699 cagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaat 15328765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 35995917 - 35995751
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| ||||  |||| |||||||||||||||  ||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||    
T  35995917 gcataaattacgtccttgtatatttagattcctcccactttttgtccctgtaatttcatgttcctccacttttggtccctcattttacgtgtcatgtatg 35995818  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  35995817 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaat 35995751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 43572535 - 43572692
Alignment:
Q  6 aattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagat 105  Q
    ||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||| ||||| |||| ||||||||||||||||||||| || ||||||    
T  43572535 aattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattactccacttttggtccctcattttacgtgtcatttacgcagat 43572634  T
Q  106 tttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    | |||| |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  43572635 tctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggaca 43572692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 14171825 - 14171659
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| ||||||| || |||||||| | |||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  14171825 gcatcaattacgaccttgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccatttttgatccctcattttacgtgccatgtatg 14171726  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||| ||||||||||||||| ||||||||||||||||||||    
T  14171725 cagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattacagggacaaaat 14171659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 16722130 - 16722296
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||| ||| ||||||||| | ||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  16722130 gcataaattatgtcactgtaatttcagattcctcccacttctggtccctgtaatttcagattcctccacttttggtccctcattttacgtgtcatgtatg 16722229  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| || ||||| |||   ||||||||||||||||||| ||||||||||||||||||||    
T  16722230 cagattctgcttacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaat 16722296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 19113004 - 19112838
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | |||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||  ||||||||    
T  19113004 gcataaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcagatttctccacttttggtccctcattttacgtaccatgtatg 19112905  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||| ||||||| ||||||||||||    
T  19112904 cagattctgcttacgtggtggaataagggaccaaaagtggaagaatatgaaattccagggacaaaat 19112838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 30500279 - 30500114
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||| |||||||||||| | |||||||||||||||| ||| |||||||||| |||||| || |||| ||||||||||||||||| |||||||||    
T  30500279 cataaattacatccctgtaatttcagattcctcccacttttggtccatgtaatttcaaattccttcacttttggtccctcattttacgtgccatgtatgc 30500180  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| |||||||| |||   ||||||||||||||||||| ||||||||||||||||||||    
T  30500179 agattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaat 30500114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 49986667 - 49986823
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | ||||||| |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||    
T  49986667 gcataaattacgtccttgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatg 49986766  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattaca 157  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||| ||||||||||    
T  49986767 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattaca 49986823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4204947 - 4204785
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||| ||| | |||||| | |||||||||||| ||| || ||||||||||| ||| ||||| |||| ||||||||||||||||| ||||||||    
T  4204947 gcataaattacatccatataatttcagattcctcccactattggtctctgtaatttcatattactccacttttggtccctcattttacgtgccatgtatg 4204848  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  4204847 cagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggaca 4204785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 5800744 - 5800910
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||| | ||||| |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||    
T  5800744 gcataaattacgtccctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccatttttggtccctcattttacatgccatgtatg 5800843  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || |||||||| | |||||| |||   ||||||||||||||||||| |||||||||| |||||||||    
T  5800844 caaattttgctgaagtggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaat 5800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 9267214 - 9267048
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||| |||| |||||||| | |||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||   |||||||    
T  9267214 gcataaattaagtccttgtaatttcagattcctcccacttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtacaatgtatg 9267115  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| ||||| || ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  9267114 cagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 9267048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 38283690 - 38283855
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    ||||| ||||||||||||||||| | |||||||||||||||  ||| |||||||||| ||||||||| |||| ||||||||||||||||| |||||||||    
T  38283690 cataagttacgtccctgtaatttaagattcctcccactttttgtccgtgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgc 38283789  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| ||||| ||||||   ||| |||||||||||||||||||||||| |||||||||||    
T  38283790 agattctgctgacgtgatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaat 38283855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 45003637 - 45003801
Alignment:
Q  3 ataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgca 102  Q
    ||||||||||||| |||||||| | |||||||||||||||| |||||||||||||| ||||||||| ||||  ||||||||||||| || ||||||||||    
T  45003637 ataaattacgtccttgtaatttcagattcctcccacttttgttccctgtaatttcatattcctccacttttgatccctcattttacatgccatgtatgca 45003736  T
Q  103 gattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||| |||| |||||||| ||||  ||||||||||||||||||| |||||||| |||||| ||||    
T  45003737 gattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggactaaat 45003801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 20853935 - 20853769
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||| ||| ||||||||| | ||||||||||||| || || ||||||||| ||||||||||| |||| ||||||||||||||||| ||||||||    
T  20853935 gcataaattatgtcactgtaatttcagattcctcccacttctggtctctgtaattttagattcctccacttttggtccctcattttacgtgccatgtatg 20853836  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| | || |||||||| ||||  ||||||||||||||||||| |||||||| |||||||||||    
T  20853835 cagattctacttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggacaaaat 20853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 33372545 - 33372709
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| ||||| |||| |||||||| | |||||||||||||||| || ||||||||||| ||||||||| ||||  ||||||||||||||||||| |||||    
T  33372545 gcatcaattaagtccttgtaatttcagattcctcccacttttggtctctgtaatttcatattcctccacttttgatccctcattttacgtgtca-gtatg 33372643  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33372644 cagattctgctgacgtggtggaatgg-ggatcaaaagtggaagaatctgaaattacagggacaaaat 33372709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 52552927 - 52552765
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||    ||| |||||||||||||| |||||| || |||| ||||||||||||||||||||||||||    
T  52552927 gcataaattacgtccctgtaatttcagattcctccc----ttggtccctgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgtatg 52552832  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| || ||||| |||   ||| ||||||||||||||||||||||||||||||||||||    
T  52552831 cagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaattacagggacaaaat 52552765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 17465605 - 17465449
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    ||||||||||||| ||||||||| | |||||||||||||||| ||| |||||||||| ||||||||| |||| ||||||||||||||||| |||||||||    
T  17465605 cataaattacgtctctgtaatttcagattcctcccacttttggtcc-tgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgc 17465507  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagg 159  Q
    ||||| |||| |||||||| ||||   || ||||| ||||||||||||||||||||||    
T  17465506 agattctgcttacgtggtggaatgagagatcaaaaatggaagaatctgaaattacagg 17465449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 47575511 - 47575356
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||  |||||||||||| |||||||||||| ||||  |||||||||||||| ||||||||| ||||  |||||||||||||||| ||||||||    
T  47575511 gcataaattatatccctgtaatttcaaattcctcccattttttgtccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgtatg 47575412  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattaca 157  Q
    |||||| ||||  ||||||| ||| | |||||||||||| |||||| | ||||||||    
T  47575411 cagattctgctgccgtggtggaatag-ggaccaaaagtgaaagaatataaaattaca 47575356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11003871 - 11003945
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttag 75  Q
    |||| ||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  11003871 gcatcaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttag 11003945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 14171822 - 14171891
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  14171822 atgcagattttgctgacgtgatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaat 14171891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 33372548 - 33372479
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| ||||| ||||| |  ||||||||||||||| ||||||||||||||||||||||||    
T  33372548 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaat 33372479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 20853962 - 20854001
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20853962 ggaccaaaagtggaagaatctgaaattacagggacaaaat 20854001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 43572501 - 43572462
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43572501 ggaccaaaagtggaagaatctgaaattacagggacaaaat 43572462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 14162014 - 14161948
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||||||| ||||||||||||||||    
T  14162014 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggaca 14161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 30500276 - 30500346
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||| |||||||||| ||||| ||||| |  ||||||||||||||| ||| ||||||||||||||||||||    
T  30500276 tatgtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaat 30500346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 52552923 - 52552993
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||||||| ||||||||||| ||||||||    
T  52552923 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaat 52552993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 11003844 - 11003805
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  11003844 ggaccaaaagtggaagaatctgaaattacaaggacaaaat 11003805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 16722103 - 16722064
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  16722103 ggaccaaaagtggaagaatctgaaattacatggacaaaat 16722064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 45003608 - 45003569
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  45003608 ggacaaaaagtggaagaatctgaaattacagggacaaaat 45003569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 5800748 - 5800682
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||||||| |||| ||||| ||||| |  ||||||||| ||||||||| ||||||||||||||||    
T  5800748 tatgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaattacagggaca 5800682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 14262271 - 14262341
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  |||| |||||||||| ||| ||||||||||||||||||||    
T  14262271 tatgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaat 14262341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 45970026 - 45969988
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  45970026 gaccaaaagtgaaagaatctgaaattacagggacaaaat 45969988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 49986639 - 49986601
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  49986639 gaccaaaagtagaagaatctgaaattacagggacaaaat 49986601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 1068915 - 1068955
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaatt 168  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  1068915 ggactaaaagtggaagaatctgaaatgacagggacaaaatt 1068955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 21633008 - 21632972
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaa 164  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21633008 ggaccaaaagtgaaagaatctgaaattacagggacaa 21632972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 32998433 - 32998397
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctc 81  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32998433 tccctgtaatttcagattcctccacttttagtccctc 32998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 9267241 - 9267280
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  9267241 ggaccaaaagtagaagaatctgatattacagggacaaaat 9267280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 14161920 - 14161881
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  14161920 ctaaaactggaattcgctaatattacagggacgaaaagag 14161881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 17465633 - 17465676
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    |||||||||||| |||||||| || |||||||||||||||||||    
T  17465633 ggaccaaaagtgaaagaatctaaagttacagggacaaaatttaa 17465676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 19113031 - 19113070
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  19113031 ggaccaaaagtagaagaatctgaaattacagggataaaat 19113070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 30500369 - 30500408
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  30500369 ctaaaactggaattcgctaatattacagggacgaaaagag 30500408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 45969964 - 45969925
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  45969964 ctaaaaccggaattcactaatattacagggacgaaaagag 45969925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 47575507 - 47575577
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |||| |||||||||| ||| ||||||||||||||| ||||||||    
T  47575507 tatgcagattctgctgacgtgatgaaa-ggagagaccaaaagttgaaaaatctgaaattacagagacaaaat 47575577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 52553017 - 52553064
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaaga-gtatttac 239  Q
    |||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  52553017 ctaaaactagaattcgctaatattacaaggacgaaaagatgtatttac 52553064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 16722207 - 16722173
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  16722207 ggaccaaaagtggaggaatctgaaattacagggac 16722173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 17465697 - 17465735
Alignment:
Q  194 taaaactggaattcactaatattacaaggacgaaaagag 232  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  17465697 taaaactgaaattcgctaatattacaaggacgaaaagag 17465735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 17649277 - 17649315
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  17649277 gaccaaatgtggaataatctgaaattacagggacaaaat 17649315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 19112813 - 19112759
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaaga-gtatttactctattt 246  Q
    ||||||| ||||||| ||||||||||| ||||||||||| |||||||| ||||||    
T  19112813 ctaaaaccggaattcgctaatattacatggacgaaaagaggtatttaccctattt 19112759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 49986744 - 49986710
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  49986744 ggaccaaaagtggaggaatctgaaattacagggac 49986710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 35995944 - 35995981
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaa 165  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  35995944 ggaccaaaagtggaagaatctgaaattactgagacaaa 35995981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 4204787 - 4204827
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    ||||||||||||||||||| |||| |||| |||||||||||    
T  4204787 tccctgtaatttcagattcttccacttttggtccctcattt 4204827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 43572690 - 43572650
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    ||||||||||||||||||| |||| |||| |||||||||||    
T  43572690 tccctgtaatttcagattcttccacttttggtccctcattt 43572650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 4e-61; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 15640854 - 15641084
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  15640854 gcataaattacgtccctgtaatttcagattcctcccacttttgatccttgtaatttcagattcctccacttttggtccatcattttacgtgtcatgtatg 15640953  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaannnnnnnnnnnngacaggaagctaaaact 200  Q
    || ||| |||| |||||||||||||  | |||||||||||||||||||||||||||||||||| ||| |||             |||||||  ||||||     
T  15640954 catattctgctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttttacaggaa-ttaaaacc 15641052  T
Q  201 ggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||||||||||||||||||||||||||    
T  15641053 ggaattcactaatattacaaggacgaaaagag 15641084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 9396838 - 9397004
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  9396838 gcataaattacgtccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcctccacttttggtccctcattttacgtgtcatgtatg 9396937  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| ||||| || ||||  || |||||||||||||||||||||||||||||||||||||    
T  9396938 cagattctgctgacgtgttggaatgatggtccaaaagtggaagaatctgaaattacagggacaaaat 9397004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 9516848 - 9516683
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||||||| |||||||| | |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  9516848 cataaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtatcatgtatgc 9516749  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| |||||||| ||||  ||||||||||||||||||| |||||||||| |||||||||    
T  9516748 agattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaat 9516683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 7819153 - 7819319
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||| ||| |||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  7819153 gcatcaattacgtccatgtaatttcagattcctcccacttttggtccatgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatg 7819252  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  7819253 cagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgacattacagggacaaaat 7819319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 37012946 - 37012780
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||| ||| ||||||| ||| |||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  37012946 gcataaattacgtccctgtaatttcatattcttcctacttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 37012847  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||||||||||||||||||||||||    
T  37012846 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaat 37012780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 46046663 - 46046497
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||| ||||||||    
T  46046663 gcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatg 46046564  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| | ||||||||||| ||||  ||| ||||||||||||||| ||||||||||||||||||||    
T  46046563 cagattctactaacgtggtggaatgagggatcaaaagtggaagaatatgaaattacagggacaaaat 46046497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 13132180 - 13132024
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | ||| |||||||||||| ||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  13132180 gcataaattacgtccttgtaatttcatatttctcccacttttggtccatgtaatttcagattactccacttttagcccctcattttacgtgtcatgtatg 13132081  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattaca 157  Q
    |||||| |||| |||||||||||||  ||| ||||||||||||||||||||||||||    
T  13132080 cagattctgctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattaca 13132024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 4356020 - 4356186
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | |||||||| ||||||| ||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  4356020 gcataaattacgtccttgtaatttcagattcctcctacttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgtatg 4356119  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||| ||||||||||| ||||||||    
T  4356120 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagagacaaaat 4356186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 34064221 - 34064055
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  34064221 gcataaattacgtccttgtaatttcagattcctcctacttttggtccctgtaatttcagattcctccacttttagtccctcattttacatgccatgtatg 34064122  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
     |||||  ||| | |||||| ||||  ||||||||||||||||||||||||||||||| ||||||||    
T  34064121 tagattcggctgatgtggtggaatgagggaccaaaagtggaagaatctgaaattacagagacaaaat 34064055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 38574207 - 38574041
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||| |||||||||||||| | |||||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||||| || ||||||||    
T  38574207 gcatcaattgcgtccctgtaatttcagattcctcccacttttggtctctgtaatttcatattcctccacttttggtccctcattttacatgccatgtatg 38574108  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  38574107 cagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 38574041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 3018151 - 3018315
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||| || |||||||| | |||||||||||||||| ||||| |||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  3018151 gcataaattacggccttgtaatttcacattcctcccacttttggtccctataatttcaaattcctccacttttggtccctcattttacgtgtcatgtatg 3018250  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaa 165  Q
    |||||| |||| |||||||| |||   ||||||||||||| |||||||||||||||| |||||||    
T  3018251 cagattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaattacacggacaaa 3018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 31090299 - 31090134
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||||||| |||||||| | ||| |||||||||||| |||| ||||||||||||||||||| |||| |||| |||||||||||  |||||||||    
T  31090299 cataaattacgtccttgtaatttcagatttctcccacttttggtccccgtaatttcagattcctccacttttggtccttcattttacgtaccatgtatgc 31090200  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    | ||| |||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  31090199 aaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 31090134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 9619126 - 9619284
Alignment:
Q  9 tacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagatttt 108  Q
    |||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||| ||||  |||||| ||||||||| || |||| |||||| |    
T  9619126 tacgtccctgtaatttcatattcctcccatttttggtccctgtaatttcagattcctccacttttgctccctctttttacgtgccaggtatacagattct 9619225  T
Q  109 gctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||| |||||||| |||| |||||||||||||||||||| |||||||||| |||||||||    
T  9619226 gcttacgtggtggaatgaaggaccaaaagtggaagaatatgaaattacaaggacaaaat 9619284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 18667428 - 18667594
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||| ||||||| |||||||||||| | ||||||||| |||| ||||||||||||||||| ||||||||    
T  18667428 gcataaattacgtccctgtaatttcagattcctccaacttttggtccctgtaattttaaattcctccacttttggtccctcattttacgtgccatgtatg 18667527  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| | || |||||||| |||   |||| |||| ||||||||||||||||||||||| ||||||    
T  18667528 cagattctactgacgtggtggaataagggacaaaaactggaagaatctgaaattacagggtcaaaat 18667594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 3273761 - 3273925
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | |||||||||||||||| ||| |||||||||||||| |||||  ||| |||| |||||||||||| ||||||||    
T  3273761 gcataaattacgtccttgtaatttcatattcctcccacttttggtcc-tgtaatttcagattactccacgtttggtcc-tcattttacgtgccatgtatg 3273858  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| | || |||||||||||||  ||| |||||||||||||||||||||||||||||| |||||    
T  3273859 cagattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaat 3273925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 31944089 - 31944255
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| ||||| |||| |||||||| | |||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||| || |||||    
T  31944089 gcatcaattatgtccatgtaatttcagattcctcccacttttggtccatgtaatttcagattcctccacttttggtccctcattttacgtgccaagtatg 31944188  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| || | |||||||| ||||  |||| |||||||||||||| |||||||||| |||||||||    
T  31944189 cagattctgttgacgtggtggaatgagggacaaaaagtggaagaatatgaaattacatggacaaaat 31944255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 48580105 - 48579939
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||| || || |||||||| ||||||||| ||||  |||||||||||||||| ||||||||    
T  48580105 gcataaattacgtccttgtaatttcaaattcctcccacttttggtctctctaatttcaaattcctccacttttgctccctcattttacgtgccatgtatg 48580006  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
     ||||| |||| |||||||| |||   ||||||||| || |||||||||||||||||| ||||||||    
T  48580005 tagattctgctgacgtggtggaataagggaccaaaattgaaagaatctgaaattacagagacaaaat 48579939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 45 - 232
Target Start/End: Original strand, 26252419 - 26252605
Alignment:
Q  45 tccctgtaatttcagattcctcc-atttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaag 143  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||| |||| |||| ||| ||||| ||||||||||||||||    
T  26252419 tccctgtaatttcagattcctcccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtagtggaatgggggaccaaaagtggaag 26252518  T
Q  144 aatctgaaattacagggacaaaatttaannnnnnnnnnnngacaggaagctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||| |||||||||||||||||||| |||             ||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  26252519 aatatgaaattacagggacaaaatctaaatcttttttttt-acaggaa-ctaaaactggaattcgctaatattacagggacgaaaagag 26252605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 48259901 - 48260056
Alignment:
Q  12 gtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgct 111  Q
    |||| |||||||| | |||||||| ||||||| ||||||| |||||||||||||||| ||||  |||||||||||||||| |||||||||||||| ||||    
T  48259901 gtccatgtaatttcagattcctcctacttttggtccctgttatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagattatgct 48260000  T
Q  112 aacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
     ||||| || ||||   || ||||||||||||||| ||||||||||||||||||||    
T  48260001 gacgtgatggaatgagcgatcaaaagtggaagaatttgaaattacagggacaaaat 48260056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 18713099 - 18713265
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||||||||| |||||| ||| |||||||||| ||||||| | |||| |||||||| |||||||   |||||||    
T  18713099 gcataaattacgtccctgtaatttcagattcctccctcttttggtccatgtaatttcaaattcctcaacttttggtccctcagtttacgttcaatgtatg 18713198  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
     ||||| |||| |||||||| |||   ||||||||| ||||||||||||||||||||| ||||||||    
T  18713199 tagattctgctgacgtggtggaataagggaccaaaactggaagaatctgaaattacagagacaaaat 18713265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 35376322 - 35376437
Alignment:
Q  57 cagattcctcc-atttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaatta 155  Q
    ||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||    
T  35376322 cagattcctcccacttttggtccctcattttacgtgtcatgtatacagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaatta 35376421  T
Q  156 cagggacaaaatttaa 171  Q
    ||||||||||||||||    
T  35376422 cagggacaaaatttaa 35376437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 7819156 - 7819087
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggagga-ccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  7819156 atgcagattttactaacgtgatgaaa-ggaggaaccaaaagtggaagaatctgaaattacagggacaaaat 7819087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 46046660 - 46046729
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| ||||| ||||| |  ||| ||||||||||||||||||||||||||||||||||||    
T  46046660 atgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaat 46046729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 37012942 - 37013012
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||| ||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  37012942 tatgcagattttgctgacgtgatgaaa-ggagtgaccaaaagtggaagaatatgaaattacagggacaaaat 37013012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 3018155 - 3018085
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||||||| ||||||||||||||||||||    
T  3018155 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 3018085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 31944061 - 31943952
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaatttaannnnnnnnnnnngacaggaagctaaaactggaattcactaatattacaaggacgaaa 228  Q
    |||||||||||||||||| |||||||||||||||||||| |||             ||||||| ||||||| ||||||| ||||||||||| ||||||||    
T  31944061 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttatttacaggaa-ctaaaaccggaattcgctaatattacagggacgaaa 31943963  T
Q  229 agagtatttac 239  Q
    |||||||||||    
T  31943962 agagtatttac 31943952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 38574204 - 38574273
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||| | ||||| ||||| |  ||||||||||||||||||| ||||||||||||||||||||    
T  38574204 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 38574273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 9619092 - 9619053
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9619092 ggaccaaaagtggaagaatctgaaattacagggacaaaat 9619053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 26252380 - 26252341
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26252380 ggaccaaaagtggaagaatctgaaattacagggacaaaat 26252341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 4356024 - 4355954
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||||||||| |||||||  |||||||||||| |||||| ||||||||||  ||||||||    
T  4356024 tatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaat 4355954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 18713103 - 18713033
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||| ||||| ||||| |  ||||||||| ||||| ||| ||||||||||||||||||||    
T  18713103 tatgcagattttgctgacgtgatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaat 18713033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 34064217 - 34064287
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| |||||    ||||||||||||||||||||||||||||||| ||||||||    
T  34064217 tatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaat 34064287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26252407 - 26252455
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccct 49  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  26252407 gcataaattacgtccctgtaatttcagattcctcccacttttggtccct 26252455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 3273734 - 3273695
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  3273734 ggaccaaaagtggaagaatatgaaattacagggacaaaat 3273695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 9516876 - 9516915
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  9516876 ggaccaaaagtagaagaatctgaaattacagggacaaaat 9516915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 31090327 - 31090366
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  31090327 ggaccaaaagtagaagaatctgaaattacagggacaaaat 31090366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 9396842 - 9396772
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||| ||| |||||||| |||||||||||    
T  9396842 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaat 9396772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 48580101 - 48580171
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||| |||||| ||| ||||| |  ||||||||||||||| ||| ||||||||||||||||||||    
T  48580101 tatgcatattctgctaaggtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaat 48580171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 36888979 - 36888943
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctc 81  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36888979 tccctgtaatttcagattcctccacttttagtccctc 36888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 43312288 - 43312324
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctc 81  Q
    |||||||||||||||||||||||| ||||||||||||    
T  43312288 tccctgtaatttcagattcctccacttttagtccctc 43312324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 13132207 - 13132242
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13132207 ggaccaaaagtggaagaatatgaaattacagggaca 13132242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 15640827 - 15640788
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  15640827 ggaccaaaagtgaaagaatatgaaattacagggacaaaat 15640788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 35376305 - 35376235
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| |||| ||||| ||||| |||| |||||||||||||||||||| ||||||||| ||||||||    
T  35376305 tatgcggattctgctgacgtgatgaaa-ggagagaccaaaagtggaagaatctaaaattacagagacaaaat 35376235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 41947014 - 41946975
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  41947014 ctaaaaccggaattcactaatattacagggacgaaaagag 41946975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 43312321 - 43312278
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||    
T  43312321 ggactaaaagtggaggaatctgaaattacagggacagaatttaa 43312278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 9516772 - 9516806
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  9516772 ggaccaaaagtggaggaatctgaaattacagggac 9516806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 12904857 - 12904819
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  12904857 gaccaaaagtggaagaatctgaaattataaggacaaaat 12904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 18667620 - 18667658
Alignment:
Q  194 taaaactggaattcactaatattacaaggacgaaaagag 232  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  18667620 taaaactggaattcgctaatattacagggacgaaaagag 18667658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 31090216 - 31090257
Alignment:
Q  121 aaatggaggaccaaaagtggaagaatctgaaattacagggac 162  Q
    ||||| ||||||||||||||| |||||||||||||| |||||    
T  31090216 aaatgaaggaccaaaagtggaggaatctgaaattacggggac 31090257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 31218310 - 31218362
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaaga-gtatttactctat 244  Q
    ||||||| ||||||| ||||||||||| ||||||||||| |||||||| ||||    
T  31218310 ctaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccctat 31218362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 9e-59; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 6817360 - 6817133
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  6817360 gcataaattacgtccctgtaatttcaaattcctcccacttttgattc-tgtaatttcagattcctccatttttggtcccttattttacgtgccatgtatg 6817262  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaannnnnnnnnnnngacaggaagctaaaact 200  Q
    |||||| |||| |||||||||||||  |||||||||||||||||||||||||||||| ||||| ||| |||             ||||| | |||||||     
T  6817261 cagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatctttttttt--acaggga-ctaaaacc 6817165  T
Q  201 ggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||||||||||||||||||||||||||    
T  6817164 ggaattcactaatattacaaggacgaaaagag 6817133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20709451 - 20709289
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  20709451 gcataaattacatccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcctccactttttgtccctcattttacgtgccatgtatg 20709352  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||| |||| |||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  20709351 cagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggaca 20709289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 7126156 - 7125990
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  7126156 gcataaattacgtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 7126057  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   |||||||||||||||||||||||||||| |||||||||||    
T  7126056 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattatagggacaaaat 7125990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 41001591 - 41001426
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    ||||||||| ||| ||||||||| |  |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41001591 cataaattatgtcactgtaatttcatcttcctcccacttctggtccctgtaatttcagattcctccatttttagtccctcattttacgtgccatgtatgc 41001492  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| || ||||| |||| |||||||||||||||||||| ||||||||||||||||||||    
T  41001491 agattctgcttacatggtggaatgaaggaccaaaagtggaagaatatgaaattacagggacaaaat 41001426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 29444945 - 29445111
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||| | ||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  29444945 gcataaattacgtccctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctacattttttgtccctcattttacgtgtcatgtatg 29445044  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || ||||| || |||||||| |||   |||||||||||||||||||||||||||||| |||||||||    
T  29445045 caaattttactgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaat 29445111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 993983 - 993820
Alignment:
Q  3 ataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgca 102  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||    
T  993983 ataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatt-catattcctccacttttggtccctcattttacgtgtcatgtatgca 993885  T
Q  103 gattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||| |||| |||||||| ||||  ||||||||||||||||||| |||||||||| |||| ||||    
T  993884 gattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggactaaat 993820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 14144040 - 14144206
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||| ||||||||| ||| |||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  14144040 gcataaattacgtccctgtaatttcagattccttccacttttggtccatgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 14144139  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| || | |||||||| |||   ||||||||||||||||||| ||||||||||||||||||||    
T  14144140 cagattctggtgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagggacaaaat 14144206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 24650938 - 24650773
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||| |||||||||||| | ||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  24650938 gcataaattacatccctgtaatttcatatttctcccactttgg-tccctgtaatttcagattcctccatttttggtccctcattttacgtgccatgtatg 24650840  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| |||||||| ||||    ||||||||||||||||| |||||||||||| |||||||    
T  24650839 cagattttgctgacgtggtggaatgagctaccaaaagtggaagaatatgaaattacaggaacaaaat 24650773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 23979042 - 23979206
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||||||| |||||||| | ||| |||||||||||| ||||| |||||||||||| |||||  ||| |||| ||||||||||||||||||||||    
T  23979042 cataaattacgtccttgtaatttcatatttctcccacttttggtccctttaatttcagattactccacgtttggtcc-tcattttacgtgtcatgtatgc 23979140  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  23979141 agattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaat 23979206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 4919229 - 4919063
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | |||||||| ||||||| || ||||||||||| ||||||||| |||| ||||||||||||||||  ||||||||    
T  4919229 gcataaattacgtccttgtaatttcatattcctccaacttttggtcactgtaatttcaaattcctccacttttggtccctcattttacgtaccatgtatg 4919130  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || ||| |||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  4919129 caaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 4919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 17762421 - 17762587
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||||||||| |||||| |||||||||||| ||||||||||| |||| ||||||||||||| ||  ||||||||    
T  17762421 gcataaattacgtccctgtaatttcatattcctcccgcttttggtccctgtaattttagattcctccacttttggtccctcattttatgtcccatgtatg 17762520  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || ||| |||| |||||||| ||||  ||||||||||||||||||||||||||||  ||||||||||    
T  17762521 caaattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattatggggacaaaat 17762587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 24837408 - 24837242
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | ||||||| |||||||| |||||||||||||||||||||||| ||||  |||||||||||||||  |||||||     
T  24837408 gcataaattacgtccttgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtaccatgtata 24837309  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||| |||||||||| |||||||||    
T  24837308 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaat 24837242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 31799879 - 31799713
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||||| |||||| | |||||||||||||||| |||||||||||||| | ||||||| |||| |||||||||||||| || |||||||     
T  31799879 gcataaattacgtccctttaatttcagattcctcccacttttggtccctgtaatttcaaaatcctccacttttggtccctcattttacatgccatgtata 31799780  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || ||| |||| |||||||| |||   ||||||||||||||||||||||||||||||||||||||||    
T  31799779 caaattctgcttacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaat 31799713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 24074442 - 24074607
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||||  |||||| | |||| ||||||||||||||| |||||||||| ||| ||||| |||| ||||||||||||||||| ||| ||||    
T  24074442 gcataaattacgtccccataatttcagattcatcccacttttgatcc-tgtaatttcaaatttctccacttttggtccctcattttacgtgccatatatg 24074540  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| ||||||| ||||   ||||||||||||||||||| |||||||||| |||||||||    
T  24074541 cagattctgctgacgtggttaaataagggaccaaaagtggaagaatatgaaattacaaggacaaaat 24074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 14411848 - 14411971
Alignment:
Q  45 tccctgtaatttcagattcctcc-atttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaag 143  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| ||||| |||| |||||||| ||||  |||||||| |||||||    
T  14411848 tccctgtaatttcagattcctcccacttttggtccctcattttacgtgtcatgtatgtagattctgcttacgtggtggaatgagggaccaaacgtggaag 14411947  T
Q  144 aatctgaaattacagggacaaaat 167  Q
    |||||||||||||| |||||||||    
T  14411948 aatctgaaattacaaggacaaaat 14411971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 18336639 - 18336761
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaaga 144  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| || ||| |||| || ||||| |||   ||| |||||||||||||    
T  18336639 tccctgtaatttcagattcctccacttttggtccctcattttacgtgacatgtatacaaattctgcttacatggtgtaataagggatcaaaagtggaaga 18336738  T
Q  145 atctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||    
T  18336739 atctgaaattacagggacaaaat 18336761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 27159184 - 27159059
Alignment:
Q  45 tccctgtaatttcagattcctcc-atttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaag 143  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||||| |  ||||| |||||||||| |||||||| |||   ||||||||||||||||    
T  27159184 tccctgtaatttcagattcctcccacttttgatccctcattttacgtgcc--gtatgtagattttgctgacgtggtggaataagggaccaaaagtggaag 27159087  T
Q  144 aatctgaaattacagggacaaaatttaa 171  Q
    ||||||||||||||||||||||||||||    
T  27159086 aatctgaaattacagggacaaaatttaa 27159059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 30512458 - 30512360
Alignment:
Q  70 ttttagtccctcatttt-acgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||| |||||||||||| ||||| |||||||||||||| |||| |||||||| ||||  ||||||||||||||| ||||||||||||||||||| ||||    
T  30512458 ttttcgtccctcatttttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaat 30512360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 30552798 - 30552700
Alignment:
Q  70 ttttagtccctcatttt-acgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||| |||||||||||| ||||| |||||||||||||| |||| |||||||| ||||  ||||||||||||||| ||||||||||||||||||| ||||    
T  30552798 ttttcgtccctcatttttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaat 30552700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 22571316 - 22571159
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| |  ||||||| || |||| ||||| |||||||| |||| |||  |||| ||||||||||| |||| ||| | |      
T  22571316 gcataaattacgtccctgtaatttcaggttcctcctacatttggtccctctaatttcatattcatccgcttttggtccctcatttcacgtatcacgcaca 22571217  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacag 158  Q
    || ||| |  | |||||||||||||  ||||||||||||||||||| |||||||||||    
T  22571216 catattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacag 22571159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 7126152 - 7126222
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||||||| ||||||||||||||||||||    
T  7126152 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 7126222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27159196 - 27159148
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccct 49  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  27159196 gcataaattacgtccctgtaatttcagattcctcccacttttgatccct 27159148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 14144044 - 14143974
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| | || ||||| |||||||  | ||||||||||||||||| ||||||||||||||||||||    
T  14144044 tatgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaat 14143974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 17762425 - 17762355
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| | ||| |  |||||||||||||||||||||||||||||||| |||||||    
T  17762425 tatgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaat 17762355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 20959330 - 20959396
Alignment:
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||||||| |||| ||||| | ||||||||||||| |||||||||||| ||||||||||||    
T  20959330 cagattctgctaacatggttaaatgaacgaccaaaagtggaggaatctgaaattgcagggacaaaat 20959396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 24074446 - 24074376
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||||||| ||||||||||| ||||||||    
T  24074446 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaat 24074376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 20947016 - 20947053
Alignment:
Q  48 ctgtaatttcagattcctccatttttagtccctcattt 85  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20947016 ctgtaatttcagattcctccatttttagtccctcattt 20947053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14411836 - 14411884
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccct 49  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  14411836 gcataaattacgtccctgtaatttcagattcctcccacttttggtccct 14411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 994012 - 994051
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  994012 ggaccaaaagtggaagaatctgcaattacagggacaaaat 994051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 41001619 - 41001658
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  41001619 ggaccaaaagtggaagaatctgaaattatagggacaaaat 41001658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 6817388 - 6817426
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6817388 gaccaaaagtggaagaatatgaaattacagggacaaaat 6817426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 14411840 - 14411770
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||| |||| ||||| ||||| |  ||||||||||||||||||||||||||||||  ||||||||    
T  14411840 tatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacatagacaaaat 14411770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 167
Target Start/End: Original strand, 4919260 - 4919295
Alignment:
Q  132 caaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4919260 caaaagtagaagaatctgaaattacagggacaaaat 4919295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 18336576 - 18336541
Alignment:
Q  132 caaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||||||||||||||||||||||||||||    
T  18336576 caaaagcggaagaatctgaaattacagggacaaaat 18336541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 24837498 - 24837537
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  24837498 ctaaaactggaattcgctaatattacagggacgaaaagag 24837537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 29445134 - 29445173
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  29445134 ctaaaactggaattcgctaatattacagggacgaaaagag 29445173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 18336672 - 18336638
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  18336672 ggaccaaaagtggaggaatctgaaattacagggac 18336638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 20709447 - 20709517
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||| |||| | ||| ||||| | ||||| |||||||||||||| |||||||||| |||||||||    
T  20709447 tatgcatattctgctgatgtgatgaaaggaaggacaaaaagtggaagaatatgaaattacatggacaaaat 20709517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 24650934 - 24651004
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| |||| ||||| ||||| |  ||| ||||||||||||||||| |||||||||||| |||||    
T  24650934 tatgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaatctaaaattacagggataaaat 24651004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 27159192 - 27159262
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| |||||    ||||||||| ||||||||| | ||||||||||||||||||    
T  27159192 tatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaattacagggacaaaat 27159262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 29444949 - 29444883
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||| ||||||| |||||||||| |||||    
T  29444949 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattacaaggaca 29444883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 31799875 - 31799945
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||| |||| ||||| ||||| |  ||| |||||| ||||||||||||||||||| |||||||||    
T  31799875 tatgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctgaaattacatggacaaaat 31799945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 41424655 - 41424593
Alignment:
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    ||||||||||| || || | |||||  |||| ||||||||||||||||||||| |||||||||    
T  41424655 cagattttgctgacatgtttaaatgagggactaaaagtggaagaatctgaaatgacagggaca 41424593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 41425751 - 41425710
Alignment:
Q  44 atccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  41425751 atccctgtcatttcagattcttccatctttagtccctcattt 41425710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 41424595 - 41424635
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  41424595 tccctgtcatttcagattcttccacttttagtccctcattt 41424635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 4e-58; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 26136824 - 26136990
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||| |||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  26136824 gcataaattacgtccctgtaatttcagatttctcccacttttggtccttgtactttcagattcctccatttttggtccctcattttacgtgccatgtatg 26136923  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  26136924 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaat 26136990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22494523 - 22494687
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  22494523 gcataaattacgtccctgtaattttagattcctcctacttttggtcccagtaatttcagattcctccacttttggtccctcattttacgtgtcatgtatg 22494622  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaa 165  Q
    || ||| |||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||    
T  22494623 caaattctgcttacgtggtggaatgagggaccaaaagtggaagaatttgaaattacagggacaaa 22494687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 7689662 - 7689832
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||  |||||||||||||||||||||||| ||||  |||||||||||||||| ||||||||    
T  7689662 gcatcaattacgtccttgtaatttcagattcctcccacttttagtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatg 7689761  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    |||||| |||| |||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  7689762 cagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatttaa 7689832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 14767746 - 14767580
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||| |||| ||| ||||||||||||||||| ||||    
T  14767746 gcataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattcctccacttttggtctctcattttacgtgtcatatatg 14767647  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||| ||||||||||||||||||||||||    
T  14767646 cagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaat 14767580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 17623126 - 17622969
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |    
T  17623126 gcataaattatgtccctgtaatttcaaattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtacg 17623027  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacag 158  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||||| |||||||||    
T  17623026 cagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacag 17622969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 2583459 - 2583629
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||||||| || ||||||||    
T  2583459 gcataaattacgtccctgtaatttcagattcctcctacttttggtccctgtaatttcaaattcctccacttttagtccctcattttacatgccatgtatg 2583558  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    ||||||  ||| | |||||| ||||  | |||||||||||||||||||||||||| |||||||||||||||    
T  2583559 cagattcggctgatgtggtggaatgaggaaccaaaagtggaagaatctgaaattatagggacaaaatttaa 2583629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 10108509 - 10108675
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | |||| ||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  10108509 gcataaattacgtccttgtaatttcagattcgtcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 10108608  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||| ||||||||||||||||||||    
T  10108609 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaat 10108675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 21148175 - 21148010
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||| | |||||||| ||||||||| |||| ||||||||||||||||||||| ||||    
T  21148175 gcataaattacgtccctgtaatttcagattcctcccacttttggtcc-tataatttcaaattcctccacttttggtccctcattttacgtgtcatatatg 21148077  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||||||||||||||||||||||||    
T  21148076 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaat 21148010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 30789746 - 30789580
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||| ||| |||||||||||||||||||| ||||  |||||||| ||||||| ||||||||    
T  30789746 gcatcaattacgtccttgtaatttcatattcctcccacttttggtccttgtaatttcagattcctccacttttgatccctcatcttacgtgccatgtatg 30789647  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||| ||||||||    
T  30789646 cagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaat 30789580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 43851903 - 43851737
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||| |||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||    
T  43851903 gcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcatattcctccacttttgatccctcattttacgtgtcatgtatg 43851804  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| | |||||| ||||  ||| ||||||||||||||||||||||||||||||||||||    
T  43851803 cagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaat 43851737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 42113223 - 42113061
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||| ||||||||||||| | |||||||||||||||| ||||| |||||||| ||| ||||| |||| ||||||||||||| ||||||||||||    
T  42113223 gcataaattatgtccctgtaatttcatattcctcccacttttggtccctataatttcatattactccacttttggtccctcattttatgtgtcatgtatg 42113124  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||| |||| |||||||||||||  |||||||||||| |||||||| ||||||||||||||    
T  42113123 cagattctgctgacgtggtgaaatgagggaccaaaagtgaaagaatcttaaattacagggaca 42113061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 42605892 - 42606058
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||| || ||||||||||||||||||||| |||| ||||||||||||||||| |||| |||    
T  42605892 gcataaattacgtccctgtaatttcaaattcctcccgcttttggtcgctgtaatttcagattcctccacttttggtccctcattttacgtgccatgaatg 42605991  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || ||| |||| |||||||| |||   ||||||||||||||||||| ||||||||| ||||||||||    
T  42605992 caaattctgcttacgtggtggaataatggaccaaaagtggaagaatttgaaattacggggacaaaat 42606058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 26533020 - 26532856
Alignment:
Q  3 ataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgca 102  Q
    ||||||||| ||| |||||||| ||| ||||| |||||||| | ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  26533020 ataaattacatccttgtaatttcaaactcctcacacttttggttcctataatttcagattcctccacttttaatccctcattttacgtgtcatgtatgca 26532921  T
Q  103 gattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||| |||| |||||||| ||||  ||| ||||||||||| ||| ||||||||||||||||||||    
T  26532920 gattctgctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaattacagggacaaaat 26532856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 5555008 - 5555174
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||| ||||| | |||||||| | ||||| |||||||||||||  |||||| || |||| ||||||||||||||||| ||| ||||    
T  5555008 gcataaattacgtccctggaatttcagattcctcctagttttggtccctgtaatttcgaattccttcacttttggtccctcattttacgtgccatttatg 5555107  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| || ||||| |||   ||||||||||||||||||| ||||||||||||||||||||    
T  5555108 cagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaat 5555174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 14820433 - 14820599
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||| |||| | ||||| |||| ||||| ||| ||||||| | |||| ||||||||||||||| ||||||||||    
T  14820433 gcataaattacgtccctgtaatttcagatttctcctagttttgctccccgtaatctcaaattcctctacttttggtccctcattttacgagtcatgtatg 14820532  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||| ||||||||||||||||||||    
T  14820533 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaat 14820599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 43481553 - 43481406
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | ||||||||  || ||| ||  |||||||| ||||||||||| ||||  |||||| ||||||||| ||||||||    
T  43481553 gcataaattacgtccttgtaatttcagattcctcctgctcttggtctttgtaattttagattcctccacttttgatccctcgttttacgtgccatgtatg 43481454  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatct 148  Q
    || ||| | ||  ||||||| ||||   ||||||||||||||||||||    
T  43481453 caaattctacttgcgtggtggaatgagagaccaaaagtggaagaatct 43481406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 30789743 - 30789812
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  30789743 atgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaat 30789812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 10108513 - 10108443
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||||||| ||||||||||||||||||||    
T  10108513 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 10108443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 22848522 - 22848399
Alignment:
Q  36 cacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgt-ggtgaaatggaggaccaa 134  Q
    |||||||| || ||||||||||| ||||||||||||||  | |||||||| ||||| ||| |||||||||| |  | |||| ||||||| |  |||||||    
T  22848522 cacttttggtctctgtaatttcaaattcctccattttttat-cctcatttcacgtgccatttatgcagattcttttgacgtgggtgaaacgagggaccaa 22848424  T
Q  135 aagtggaagaatctgaaattacagg 159  Q
    || || |||||||||||||||||||    
T  22848423 aaatgaaagaatctgaaattacagg 22848399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 14820437 - 14820367
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| | ||| ||||| |  ||||||||||||||||||| ||||||||||||||||||||    
T  14820437 tatgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 14820367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 43481549 - 43481623
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    |||||||||| |||| ||||| | ||| | | |||||| ||||||||||| ||||||||||||||||||||||||    
T  43481549 tatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaattacagggacaaaatttaa 43481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 7689665 - 7689598
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaa 165  Q
    |||||||||||||  | ||| ||||| |  |||||||||||||||||||||||||||||| |||||||    
T  7689665 atgcagattttgccgatgtgatgaaaagagggaccaaaagtggaagaatctgaaattacaaggacaaa 7689598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 17623122 - 17623192
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |||| |||||||||||||||||| |||||||||| |||||||||    
T  17623122 tatgcagattctgctgacgtgatgaaa-ggagtgaccaaaagtggaagaatttgaaattacaaggacaaaat 17623192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 2583463 - 2583393
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||| ||||||| |||||||| |||||||||||||||||||    
T  2583463 tatgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaat 2583393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 5555012 - 5554942
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| |||||    ||||||||||||||||||| |||||||| |||||||||||    
T  5555012 tatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaat 5554942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 10171409 - 10171448
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  10171409 ggaccaaaagtgaaagaatctaaaattacagggacaaaat 10171448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 17622939 - 17622900
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  17622939 ctaaaactgaaattcgctaatattacaaggacgaaaagag 17622900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 42605865 - 42605826
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  42605865 ggaccaaaagtggaagaatatgaaattacagggataaaat 42605826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 17623049 - 17623083
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  17623049 ggaccaaaagtggaggaatctgaaattacagggac 17623083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 21144740 - 21144810
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||||| ||||   |||| |||| |||| ||||||||||||||| |||||||||    
T  21144740 tatgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaattacaaggacaaaat 21144810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 21148171 - 21148241
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| || || ||||| |  |||| |||||||||||||| |||||||||| |||||||||    
T  21148171 tatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaat 21148241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 22494527 - 22494458
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| | ||| | |||||||||| ||||||||| |||||||||||| |||||||    
T  22494527 tatgcagattctgctgacgtgattaaa-gaaggaccaaaaatggaagaatatgaaattacaggaacaaaat 22494458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 26137013 - 26137050
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaag 230  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  26137013 ctaaaactgaaattcactaatattacagggacgaaaag 26137050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 38726793 - 38726760
Alignment:
Q  134 aaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||| |||||||||    
T  38726793 aaagtggaagaatctgaaattacaaggacaaaat 38726760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 40487743 - 40487780
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaag 230  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  40487743 ctaaaactggaattcgctaatattacaaggaccaaaag 40487780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 21144800 - 21144764
Alignment:
Q  49 tgtaatttcagattcctccatttttagtccctcattt 85  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  21144800 tgtaatttcagattcctccatttttcgtcccttattt 21144764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 43851900 - 43851968
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaa 166  Q
    ||||| |||||||| ||||| ||||| |  |||| ||||||||||||||||  |||||||| |||||||    
T  43851900 atgcaaattttgctgacgtgatgaaaggagggacaaaaagtggaagaatcttgaattacagagacaaaa 43851968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 4e-58; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 23704800 - 23704966
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  23704800 gcataaattacttccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatg 23704899  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  23704900 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 23704966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 20458930 - 20458764
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||||||||| |||||| ||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  20458930 gcataaattacgtccctgtaatttcagattcctcccgcttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatg 20458831  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||    
T  20458830 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagcgacaaaat 20458764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 12006779 - 12006613
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||| || ||||||||||||||||||||| ||||  |||||||||||||||| ||||||||    
T  12006779 gcatcaattacgtccttgtaatttcagattcctcccacttttggtcactgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatg 12006680  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||    
T  12006679 cagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaat 12006613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 41600197 - 41600031
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||| ||||||||    
T  41600197 gcatcaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatg 41600098  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||||||||||||| ||||  ||| |||| |||||||||||||||||||||||||||||||    
T  41600097 cagattctgctaacgtggtggaatgagggatcaaatgtggaagaatctgaaattacagggacaaaat 41600031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 44817074 - 44816908
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||| | |||| ||| |||||||| ||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  44817074 gcataaattacgtacatgtagtttcaaattccttccacttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatg 44816975  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  44816974 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaat 44816908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 38879963 - 38879733
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| || || ||||||||||||||||||  ||| ||||||||||||| ||| ||||||||    
T  38879963 gcataaattacgtccctgtaatttcatattcctcccacttttggtctctataatttcagattcctccaaatttggtccctcattttatgtgccatgtatg 38879864  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaannnnnnnnnnnngacaggaagctaaaact 200  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||| |||||||||||||||||||| |||             ||||||| |||||| |    
T  38879863 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaa-ctaaaatt 38879765  T
Q  201 ggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||| ||||||||||| ||||||||||||    
T  38879764 ggaattcgctaatattacagggacgaaaagag 38879733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 20419774 - 20419609
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||||||| |||||||| | |||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||  |||||||||    
T  20419774 cataaattacgtccttgtaatttcagattcctcccacttttggtccctgtaatttcatattcctccacttttggtccctcattttacgtaccatgtatgc 20419675  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| |||||||| ||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  20419674 agattctgcttacgtggtggaatgagggaccaaaaatggaagaatatgaaattacagggacaaaat 20419609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 20963734 - 20963568
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||| |||| |||| |||| ||||||||||||||||| ||||||||    
T  20963734 gcataaattacgtccctgtaatttcatattcctcccacttttggtccttgtaatttcatattcttccacttttggtccctcattttacgtgccatgtatg 20963635  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| | |||| | ||||  ||||||||||||||||||||| ||||||||||||| ||||    
T  20963634 cagattctgcttatgtggcggaatgagggaccaaaagtggaagaatctaaaattacagggactaaat 20963568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 23383739 - 23383573
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||| ||||||| |||||||||| |||||||||||||||| ||| |||||||||| |||||| || |||| ||||||||||||||||||||||||||    
T  23383739 gcataaactacgtccttgtaattttagattcctcccacttttggtccttgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgtatg 23383640  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  |||| |||| ||||||||| |||||||| |||||||||||    
T  23383639 cagattctgcttacgtggtggaatgagggacaaaaaatggaagaatatgaaattatagggacaaaat 23383573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 48672518 - 48672352
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||  ||||||||||||| || ||||||||    
T  48672518 gcatcaattacgtccttgtaatttcaaattcctcccacttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgtatg 48672419  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||| ||||||||||||||||||||||||||| ||| ||||    
T  48672418 cagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagagacgaaat 48672352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 10409513 - 10409679
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||| ||||||| ||| |||||||||||||||||||| ||||  ||||||||||||| || ||||||||    
T  10409513 gcatcaattacgtccttgtaatttcagattcctcctacttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgtatg 10409612  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||||||||||||| ||||  ||| ||||||||||||||||| ||||||||| ||||||||    
T  10409613 cagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctaaaattacagagacaaaat 10409679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 31851478 - 31851322
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||||||| || |||||||||||||||||||| ||| ||||| |||| ||||||||||||||||| ||||||||    
T  31851478 gcataaattacgtccctgtaatttcagattcctctcaattttgatccctgtaatttcatatttctccacttttggtccctcattttacgtgccatgtatg 31851379  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattaca 157  Q
    |||||| |||| ||||||||||| |   || ||||||||||| ||| ||||||||||    
T  31851378 cagattctgctgacgtggtgaaaagagagatcaaaagtggaaaaatatgaaattaca 31851322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 1250445 - 1250275
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| |||||||||| | ||||| || |||||||| || ||||||||| ||||| ||| ||||||||| || ||||||||    
T  1250445 gcataaattacgtccctgtaatttcaaattcctcctatttttggtcactgtaattccatattcctccacttttaatccttcattttacatgacatgtatg 1250346  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    ||||||  ||| |||||||| ||||   |||||||||||||||||||| |||||| | |||||||||||||    
T  1250345 cagattcagctgacgtggtggaatgagagaccaaaagtggaagaatctaaaattaaaaggacaaaatttaa 1250275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 33162676 - 33162830
Alignment:
Q  3 ataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgca 102  Q
    ||||||||||| | |||||||| |||||||| ||||||||| ||| |||||||||||||| || || |||| ||||||||||||| ||| ||||||||||    
T  33162676 ataaattacgttcttgtaatttcaaattccttccacttttggtccgtgtaatttcagattacttcacttttggtccctcattttatgtgccatgtatgca 33162775  T
Q  103 gattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattaca 157  Q
    |||| |||| ||||||||||||| | ||| |||||||||||||| ||||||||||    
T  33162776 gattctgctgacgtggtgaaatgaaagactaaaagtggaagaatttgaaattaca 33162830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7658208 - 7658048
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||| ||||||||||||| | |||||||||||||||| ||| | ||||||||||||| || | |||||||||||||||||||||| |||| |||    
T  7658208 gcataaattatgtccctgtaatttcatattcctcccacttttggtcctt-taatttcagattcatctacttttagtccctcattttacgtgacatg-atg 7658111  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    ||||||||||| ||||| ||||| |  |||||||||||| |||||| |||||||||| |||||    
T  7658110 cagattttgctgacgtgatgaaaggatggaccaaaagtgtaagaatttgaaattacatggaca 7658048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 24194941 - 24195101
Alignment:
Q  12 gtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcat-----tttacgtgtcatgtatgcagatt 106  Q
    ||||||||||||| | ||||||| |||||||| ||||| |||||||||||||||||| |||| |||||||||     ||||||| |||||||||||||||    
T  24194941 gtccctgtaatttcagattcctctcacttttggtccctataatttcagattcctccacttttggtccctcatttcattttacgtatcatgtatgcagatt 24195040  T
Q  107 ttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
     |||| ||||| || ||||  ||||||||||||||||||| |||||||||| |||||||||    
T  24195041 ctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaat 24195101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 25772554 - 25772436
Alignment:
Q  49 tgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatct 148  Q
    |||||||||||||||||||| |||| ||||||||||||||||  |||||||||||||| |||| |||||||| ||||  ||| ||||||||||||||| |    
T  25772554 tgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgtggtggaatgagggaacaaaagtggaagaatat 25772455  T
Q  149 gaaattacagggacaaaat 167  Q
    ||||||||| |||||||||    
T  25772454 gaaattacaaggacaaaat 25772436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 48648456 - 48648334
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaaga 144  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||| | || |||||||| ||||  ||||||||| || || |    
T  48648456 tccctgtaatttcagattcctccaattttggtccctccttttacgtgccatgtatgcagattctacttacgtggtggaatgagggaccaaaaatgaaaaa 48648357  T
Q  145 atctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||    
T  48648356 atctgaaattacagggacaaaat 48648334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 28218402 - 28218252
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| ||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||| |||| |||||||                |||    
T  28218402 gcatcaattacgtccctgtaatttcagattcctcccacttttggtccctgtaatttcagattactccacttttggtccctc----------------atg 28218319  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  28218318 cagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaat 28218252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6465993 - 6466077
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  6465993 gcataaattatgtccctgtaatttcaaattcctcccacttttgatccctgtaatttcatattactccacttttggtccctcattt 6466077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 12006776 - 12006845
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  12006776 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaat 12006845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 16995341 - 16995272
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||| |||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  16995341 atgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattacagggacaaaat 16995272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 41600194 - 41600263
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  41600194 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaat 41600263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 48672515 - 48672584
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||| |||||    
T  48672515 atgcagattttgctaacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaat 48672584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 28218399 - 28218468
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||| | ||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  28218399 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaat 28218468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 7658204 - 7658274
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||| ||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  7658204 tatgcagattttgctgacgtgatgaaa-ggagagaccaaaagtggaagaatcttaaattacagggacaaaat 7658274  T

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Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 38879959 - 38880029
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| || | || |||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  38879959 tatgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaat 38880029  T

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Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 23704773 - 23704734
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23704773 ggaccaaaagtggaagaatctgaaattacagggacaaaat 23704734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 1250535 - 1250574
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  1250535 ctaaaactggaattcgctaatattacaaggacgaaaagag 1250574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 20419802 - 20419841
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  20419802 ggaccaaaagtagaagaatctgaaattacagggacaaaat 20419841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 20458957 - 20458996
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  20458957 ggaccaaaagtggaagaatctgaaattacagtgacaaaat 20458996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 25772597 - 25772636
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  25772597 ggaccaaaagtagaagaatctgaaattacagggacaaaat 25772636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 1250441 - 1250511
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| | || ||||| ||||| |  ||||||||||||||||||| |||||||| |||||||||||    
T  1250441 tatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaat 1250511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 20963757 - 20963799
Alignment:
Q  125 ggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||| |||||||||||||||||||||| ||||    
T  20963757 ggaggaccaaaagtgaaagaatctgaaattacagggactaaat 20963799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 31851506 - 31851544
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  31851506 gaccaaaagtggaagaatatgaaattacagggacaaaat 31851544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 6465997 - 6465937
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattaca 157  Q
    |||||||||| | || ||||| ||||| |  ||||||||||||||||||||||||||||||    
T  6465997 tatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattaca 6465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 23383766 - 23383805
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  23383766 ggaccaaaggtggaagaatatgaaattacagggacaaaat 23383805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 25772660 - 25772699
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaagag 232  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  25772660 ctaaaactggaattcactaatattatagggacgaaaagag 25772699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 23704877 - 23704843
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  23704877 ggaccaaaagtggaggaatctgaaattacagggac 23704843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 10409516 - 10409447
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| | ||| |||||    |||| |||||| |||||||||||||||||| |||||||||    
T  10409516 atgcagattttgctgaagtgatgaaagaagggactaaaagtagaagaatctgaaattacaaggacaaaat 10409447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 7842518 - 7842554
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctc 81  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  7842518 tccctgtaatttcagattcctccacttttagttcctc 7842554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 20963543 - 20963507
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaa 229  Q
    |||||||| |||||||||||||||||| |||||||||    
T  20963543 ctaaaactagaattcactaatattacagggacgaaaa 20963507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 24194976 - 24194936
Alignment:
Q  128 ggaccaaaagtg-gaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  24194976 ggaccaaaagtgagaggaatctgaaattacagggacaaaat 24194936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 28218227 - 28218167
Alignment:
Q  193 ctaaaactggaattcactaatattacaaggacgaaaaga-gtatttactctatttagtatt 252  Q
    ||||||| ||||||| ||||||||||| ||||||||||| |||||||| || ||| |||||    
T  28218227 ctaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccttttttgtatt 28218167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 4e-58; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 23806091 - 23806257
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  23806091 gcataaattacgtccctgtaatttcagattcctcccacttttggtccctataatttcagattcctccacttttggtccctcattttacgtgccatgtatg 23806190  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || |||||||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  23806191 caaattttgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 23806257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 26560793 - 26560627
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||| ||||||||    
T  26560793 gcataaattacgtccctgtaatttcagattcctcccacttttgatccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgtatg 26560694  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||||||||||||||||||| ||||    
T  26560693 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggactaaat 26560627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 15106206 - 15106372
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| ||||| |||| |||||||| | |||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||| ||||||||    
T  15106206 gcatcaattaagtccttgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatg 15106305  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| |||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||    
T  15106306 cagattttgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaat 15106372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 22263430 - 22263264
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||| | ||||| |||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  22263430 gcataaattacgtccctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 22263331  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| |||   ||||||||||||||||||| ||||||||||||||||||||    
T  22263330 cagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaat 22263264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 39878241 - 39878402
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||||||| ||||| |||| ||||||||||||||||||||| ||||    
T  39878241 gcataaattacgtccctgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtgtcatatatg 39878340  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||| ||||  ||||||||||||  |||||||||||| || |||||||||||||||||||    
T  39878341 cagattctgctggcgtggtgaaatgagggaccaaaagtgaaaaaatctgaaattacagggac 39878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 17463230 - 17463396
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||| ||||||||| | |||| |||||||||||||| || ||||||||    
T  17463230 gcataaattacgtccctgtaatttcagattcctcccacttttggtccctgtaattttagattcctctaattttggtccctcattttacatgccatgtatg 17463329  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| || ||||| ||||  ||| ||||||||||||||| || |||||||||||||||||    
T  17463330 cagattctgcttacatggtggaatgagggatcaaaagtggaagaatatgcaattacagggacaaaat 17463396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 19251610 - 19251837
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    ||||||||| || | |||||||| |||||||||| |||||||||||||||||||||| ||||||||| |||| |||| |||||||||||| |||||||||    
T  19251610 cataaattatgttcttgtaatttcaaattcctccaacttttgatccctgtaatttcatattcctccacttttggtccatcattttacgtgccatgtatgc 19251709  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaannnnnnnnnnnngacaggaagctaaaactg 201  Q
    ||||| |||| |||||||||||||  ||||| ||||||||||||| |||||||||| ||||| ||| |||             ||||| | ||||||| |    
T  19251710 agattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatctttttttt--acaggga-ctaaaaccg 19251806  T
Q  202 gaattcactaatattacaaggacgaaaagag 232  Q
    |||||||||||||||||||||||||||||||    
T  19251807 gaattcactaatattacaaggacgaaaagag 19251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 20498884 - 20499050
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||  | |||||| | |||||||||||||||| |||||||||||||||||  ||||| ||||  ||||||||||||||||  |||||||    
T  20498884 gcataaattacgtcaatataatttcatattcctcccacttttggtccctgtaatttcagatcactccacttttgatccctcattttacgtgctatgtatg 20498983  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20498984 cagattctgctgatgtggtgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaat 20499050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 42670958 - 42670792
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||| |||||||||| | |||||||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||| |||||| |    
T  42670958 gcataaattacgttcctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgtaag 42670859  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || |||||||| |||||||| |||   ||||||||||||||||||| |||||||||| |||||||||    
T  42670858 caaattttgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaat 42670792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 13284646 - 13284484
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||||||| |||||||| | |||||||||||||||| |||||||||||||| ||| || || |||| ||||||||||| |||||||||||||||    
T  13284646 cataaattacgtccttgtaatttaagattcctcccacttttggtccctgtaatttcatatttcttcacttttggtccctcatttcacgtgtcatgtatgc 13284547  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaa 164  Q
    ||||| || |  ||||||||||||  |||| |||||||||||||| |||||||||||||||||    
T  13284546 agattctgttgtcgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaa 13284484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 30390654 - 30390532
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaaga 144  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||||  |||||||||||||||||    
T  30390654 tccctgtaatttcagattccttcatttttggtccctcattttacgtgctatgtatgcagattttgcttacgtggtggaatgagggaccaaaagtggaaga 30390555  T
Q  145 atctgaaattacagggacaaaat 167  Q
    || ||||||||||||||||||||    
T  30390554 atatgaaattacagggacaaaat 30390532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 17850825 - 17850659
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| |||||||||| |||||||| | |||||||||||||||| | ||| |||||||||||||||||| ||||  |||||||||||| ||  ||||||||    
T  17850825 gcatcaattacgtccttgtaatttcagattcctcccacttttggttcctttaatttcagattcctccacttttgatccctcattttaggtaccatgtatg 17850726  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||| ||||||||||||||||| ||||||||| ||||||||    
T  17850725 cagattctgctgacgtggtggaatgagggatcaaaagtggaagaatcttaaattacagagacaaaat 17850659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 26236278 - 26236400
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaaga 144  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||| |||| |||||||| ||||  ||||||||| |||||||    
T  26236278 tccctgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgtggtggaatgagggaccaaaaatggaaga 26236377  T
Q  145 atctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||    
T  26236378 atctgaaattacagggacaaaat 26236400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 33290188 - 33290354
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||| |||||||||||||| | ||||||||| |||||| ||||||||||||||||| |||||| |||| ||||||||||| | | | ||||||||    
T  33290188 gcataaatttcgtccctgtaatttcagattcctcccccttttggtccctgtaatttcagatacctccacttttggtccctcatttcatgagccatgtatg 33290287  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||  | ||||||||||||   ||||||||||||||||||| |||||||||| || ||||||    
T  33290288 cagatttttttgacgtggtgaaattagggaccaaaagtggaagaatatgaaattacaaggtcaaaat 33290354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 23854905 - 23854800
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  23854905 gcataaattacgtccctgtaatttcagattcctcccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 23854806  T
Q  101 cagatt 106  Q
    ||||||    
T  23854805 cagatt 23854800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 26135956 - 26136122
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | ||||||| |||||||| ||| |||||||| ||||||||||| |||| |||||| |||||||||  ||||||||    
T  26135956 gcataaattacgtccttgtaatttcagattcctctcacttttggtccttgtaattttagattcctccacttttggtcccttattttacgtaccatgtatg 26136055  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| ||||| || || |   || ||||||||||||||| ||||||||||  ||||||||    
T  26136056 cagattctgcttacgtgatggaacgagagatcaaaagtggaagaatatgaaattacaatgacaaaat 26136122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 13254638 - 13254733
Alignment:
Q  64 ctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagg 159  Q
    ||||| |||| ||||||||||||||||||||||||| | |||| |||| | |||||||||||  ||||||||||||||||||||||||||||||||    
T  13254638 ctccacttttggtccctcattttacgtgtcatgtatactgattctgcttatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagg 13254733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 17850822 - 17850891
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  17850822 atgcagattttgctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaat 17850891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 22263426 - 22263496
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||||||| ||||||||||||||||||||    
T  22263426 tatgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 22263496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 26236270 - 26236200
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| ||| |||| ||||| ||||| |  |||||||||||| |||||||||||||||||||||||||||    
T  26236270 tatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaaaat 26236200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 15106209 - 15106140
Alignment:
Q  98 atgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| ||| ||||| ||||| |  ||||||||||||||| ||||| ||||||||||||||||||    
T  15106209 atgcagatttagctgacgtgatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaat 15106140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 19251582 - 19251543
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  19251582 ggaccaaaagtggaagaatatgaaattacagggacaaaat 19251543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 26135929 - 26135890
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  26135929 ggaccaaaagtagaagaatctgaaattacagggacaaaat 26135890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 13284659 - 13284713
Alignment:
Q  113 acgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||| |||||  |||||||||||||| ||||||||||||||| |||||||||    
T  13284659 acgtggttaaatgagggaccaaaagtggaggaatctgaaattacaaggacaaaat 13284713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 17463234 - 17463164
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| || | || || |||||||  ||||||||||||| |||| |||||||||||||||||||||    
T  17463234 tatgcagattctgttgacttgatgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaat 17463164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 23806095 - 23806025
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| |||| ||||| ||||| |  ||||||||||||||||||||| ||||||||||| ||||||    
T  23806095 tatgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctaaaattacaggggcaaaat 23806025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 23854901 - 23854971
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||||||| | ||||||||| ||||||||    
T  23854901 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaat 23854971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 39878245 - 39878184
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattacag 158  Q
    ||||||||||||||| || || ||||| |||| ||||||||||||||||||||||||||||||    
T  39878245 tatgcagattttgctgacttgatgaaa-ggagtgaccaaaagtggaagaatctgaaattacag 39878184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 42670954 - 42671020
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||||||| |||| ||||| ||||| |  ||||||||||||||| ||| ||||||||||||||||    
T  42670954 tatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaattacagggaca 42671020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 23854797 - 23854761
Alignment:
Q  131 ccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaat 23854761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 26236394 - 26236355
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcatt 84  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  26236394 tccctgtaatttcagattcttccatttttggtccctcatt 26236355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 26560789 - 26560859
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |||| |||||||||||||||||| |||||||| | |||||||||    
T  26560789 tatgcagattctgctgacgtgatgaaa-ggagagaccaaaagtggaagaatatgaaattatatggacaaaat 26560859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 13254607 - 13254570
Alignment:
Q  130 accaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  13254607 accaaaagtgaaagaatctgaaattacaaggacaaaat 13254570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 163
Target Start/End: Complemental strand, 23046813 - 23046784
Alignment:
Q  134 aaagtggaagaatctgaaattacagggaca 163  Q
    ||||||||||||||||||||||||||||||    
T  23046813 aaagtggaagaatctgaaattacagggaca 23046784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 44098894 - 44098923
Alignment:
Q  134 aaagtggaagaatctgaaattacagggaca 163  Q
    ||||||||||||||||||||||||||||||    
T  44098894 aaagtggaagaatctgaaattacagggaca 44098923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 13284487 - 13284527
Alignment:
Q  45 tccctgtaatttcagattcctccatttttagtccctcattt 85  Q
    |||||||||||||| |||| |||| ||||||||||||||||    
T  13284487 tccctgtaatttcatattcttccacttttagtccctcattt 13284527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 13284703 - 13284667
Alignment:
Q  49 tgtaatttcagattcctccatttttagtccctcattt 85  Q
    |||||||||||||||||||| |||| |||||||||||    
T  13284703 tgtaatttcagattcctccacttttggtccctcattt 13284667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26236266 - 26236313
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccct 49  Q
    |||||||||||||||||||||||| | |||||| ||||||||| |||||    
T  26236266 gcataaattacgtccctgtaatttcatattcct-ccacttttggtccct 26236313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 111; Significance: 9e-56; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 8462 - 8627
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||| ||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  8462 gcatcaattacgtccctgtaatttcagattcctcccacttttggtccttgtaatttcagattcctccatttttggtcc-tcattttacgtgtcatgtatg 8560  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||    
T  8561 cagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaat 8627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 4702 - 4868
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||    
T  4702 gcataaattacgtccgtgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatg 4801  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||| |||||||||| |||||||||    
T  4802 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaat 4868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 4675 - 4632
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  4675 ggaccaaaagtagaagaatctcaaattacagggacaaaatttaa 4632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 4779 - 4745
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  4779 ggaccaaaagtggaggaatctgaaattacagggac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 24732078 - 24732243
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||||||| |||||||| | |||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||  |||||||||    
T  24732078 cataaattacgtccttgtaatttcagattcctcccacttttggtccctataatttcagattcctccacttttggtccctcattttacgtaccatgtatgc 24732177  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||| |||| |||||||| ||||  ||||||||||||||||||| |||||||||| |||||||||    
T  24732178 agattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacatggacaaaat 24732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 9481321 - 9481487
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||| |||||||||| | |||||||| | ||||| |||||||||||||| |||||||||||||| |||||||||||| |||| ||||||||    
T  9481321 gcataaattacgttcctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccattttttgtccctcattttgcgtgccatgtatg 9481420  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || |||||||| |||||||| |||   |||||||||||||||||||||||||||||| |||||||||    
T  9481421 caaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaat 9481487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 167
Target Start/End: Complemental strand, 26385509 - 26385351
Alignment:
Q  9 tacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagatttt 108  Q
    |||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| |||||| |    
T  26385509 tacgtccctgtaatttcatattcctcccagttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatacagattct 26385410  T
Q  109 gctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||| |||||||| ||||  ||||||||||||||||||| | ||||||||||||||||||    
T  26385409 gcttacgtggtggaatgagggaccaaaagtggaagaatataaaattacagggacaaaat 26385351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 33714726 - 33714560
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||| |||||||| | ||||||| |||||||| || ||||||||||||||||||||| |||| ||||||||||||||||  ||||||||    
T  33714726 gcataaattacgtccttgtaatttcagattcctctcacttttggtctctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatg 33714627  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||| |||| |||||||| ||||  ||||||||||||||||||| |||||||||| |||||||||    
T  33714626 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaat 33714560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 30618101 - 30618266
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||||||| | |||| |||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||    
T  30618101 gcataaattacgtccctgtaatttcagattc-tcccacttttgatcactgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatg 30618199  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
     ||||| |||| |||||||| |||    ||| |||||||||||||||| ||||||||||||||||||    
T  30618200 tagattctgctgacgtggtggaataagagacaaaaagtggaagaatctaaaattacagggacaaaat 30618266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 18500543 - 18500387
Alignment:
Q  12 gtccctgtaattttaa-attcctcccacttttgatccctgtaatttc-agattcctccatttttagtccctcattttacgtgtcatgtatgcagattttg 109  Q
    |||||||||||||| | |||||||| ||||||| ||||||||||||  ||||||||||| |||| |||||||||||||||||||||||||||||||| ||    
T  18500543 gtccctgtaatttttagattcctcc-acttttggtccctgtaatttttagattcctccacttttggtccctcattttacgtgtcatgtatgcagattctg 18500445  T
Q  110 ctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    || |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||    
T  18500444 cttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaat 18500387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 30459139 - 30458978
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||  | || ||||  || |||||||||||||||||||||||    
T  30459139 cataaattacgtccctataatttcaaattcctcccacttttggtccttgtaatttcagattatttcacttttgatctctcattttacgtgtcatgtatgc 30459040  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    ||||| |||| |||||||||||||   ||| |||||| ||||||||||||||||||| ||||    
T  30459039 agattctgctgacgtggtgaaatgagagactaaaagttgaagaatctgaaattacagtgaca 30458978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 7 - 167
Target Start/End: Complemental strand, 14681115 - 14680955
Alignment:
Q  7 attacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagatt 106  Q
    |||||||||||||||||| | ||| ||| |||||||| ||| | |||||||||||| ||||| |||| ||| ||| ||| ||||||||||||||||||||    
T  14681115 attacgtccctgtaatttcagattactctcacttttggtccatataatttcagatttctccacttttggtctctcttttcacgtgtcatgtatgcagatt 14681016  T
Q  107 ttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
     |||| ||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||    
T  14681015 ctgctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaat 14680955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 10321970 - 10321809
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctcca-tttttagtccctcattttacgtgtcatgtat 99  Q
    ||||||||||||||| |||||||| | |||||||||||||||| | | |||||||||||||| ||||| ||||||| |||| |||||||||| |||||||    
T  10321970 gcataaattacgtccttgtaatttcagattcctcccacttttggttcatgtaatttcagattactccaatttttagccccttattttacgtgccatgtat 10321871  T
Q  100 gcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacaggga 161  Q
    ||||||  |||| |||||||||||||  ||| |||||||| |||||| ||||||||||||||    
T  10321870 gcagatactgctgacgtggtgaaatgagggagcaaaagtgtaagaatatgaaattacaggga 10321809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 44 - 157
Target Start/End: Complemental strand, 32017732 - 32017619
Alignment:
Q  44 atccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaag 143  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||| |||||||| |||  |||||||||||||||||    
T  32017732 atccctgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgctgacgtggtggaataaaggaccaaaagtggaag 32017633  T
Q  144 aatctgaaattaca 157  Q
    ||||||||||||||    
T  32017632 aatctgaaattaca 32017619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2299548 - 2299389
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||||||||||||| ||| | |||||||||||||||| ||| |||||||| ||||||| ||| |||| ||||||||||||||||| |||||||     
T  2299548 gcataaattacgtccctgta-tttcagattcctcccacttttggtccttgtaattttagattccgccacttttggtccctcattttacgtgccatgtata 2299450  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggac 162  Q
    || ||| |||| |||||||| ||||  |||| |||||||||||||| |||||||||||||||    
T  2299449 catattctgcttacgtggtggaatgagggactaaaagtggaagaat-tgaaattacagggac 2299389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 165
Target Start/End: Original strand, 33637710 - 33637831
Alignment:
Q  45 tccctgtaatttcagattcctcc-atttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaag 143  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||| ||||||||||||| |||| |||||||| ||||  ||| |||||||| |||    
T  33637710 tccctgtaatttcagattcctcccacttttggtccctcattttacgtgttatgtatgcagattctgctgacgtggtggaatgagggatcaaaagtgaaag 33637809  T
Q  144 aatctgaaattacagggacaaa 165  Q
    ||| ||||||||||||||||||    
T  33637810 aatatgaaattacagggacaaa 33637831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 3230102 - 3229990
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||| ||||||||||||||| | |||||||||||||||| ||| |||||||||| ||||||||| |||| ||||||||||||| || |||||||||    
T  3230102 gcataaatcacgtccctgtaatttcatattcctcccacttttggtccttgtaatttcatattcctccacttttggtccctcattttatgtttcatgtatg 3230003  T
Q  101 cagattttgctaa 113  Q
    |||||| ||||||    
T  3230002 cagattctgctaa 3229990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 9854118 - 9854192
Alignment:
Q  93 catgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||| |||||||||    
T  9854118 catgtatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaat 9854192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 17142875 - 17142798
Alignment:
Q  3 ataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccct 80  Q
    |||||||| ||||||||||||| | ||||||| |||||||| |||||||||||||||||||||||| |||| ||||||    
T  17142875 ataaattaggtccctgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 10321966 - 10322040
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaatttaa 171  Q
    |||||||||| |||| ||||| ||||| | ||||||||||||| ||||||||||||||||||||||| |||||||    
T  10321966 tatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaattacagggacataatttaa 10322040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 19284241 - 19284202
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19284241 ggaccaaaagtggaagaatctgaaattacagggacaaaat 19284202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 24732050 - 24732011
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24732050 ggaccaaaagtagaagaatctgaaattacagggacaaaat 24732011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 32017770 - 32017809
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  32017770 ggaccaaaagtggaagaatatgaaattacagggacaaaat 32017809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 2299580 - 2299614
Alignment:
Q  133 aaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||||||||||||||||||||||||||||    
T  2299580 aaaagtggaagaatctgaaattacagggacaaaat 2299614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 9481325 - 9481259
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||||||| |||| ||||| ||||| |  ||||||||| ||||||||| ||||||||||||||||    
T  9481325 tatgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatgaaattacagggaca 9481259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 30618105 - 30618035
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| | ||| |  ||||||||||||||| ||| ||||||||||||||||||||    
T  30618105 tatgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaat 30618035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 9154990 - 9154953
Alignment:
Q  130 accaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaat 9154953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18500586 - 18500506
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaa-tttcagattcctccatttttagtccct 80  Q
    |||||||||| ||||||||||||| | || | | ||||||||| ||||||||| ||| ||||||||||| |||| ||||||    
T  18500586 gcataaattatgtccctgtaatttcagatcctttccacttttggtccctgtaatttttagattcctccacttttggtccct 18500506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33637698 - 33637746
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccct 49  Q
    ||||| |||||||||||||||||| | |||||||||||||||| |||||    
T  33637698 gcatagattacgtccctgtaatttcagattcctcccacttttggtccct 33637746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 163
Target Start/End: Complemental strand, 17142788 - 17142754
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||||||||||||||| ||||||||||||||||    
T  17142788 gaccaaaagtggaagaatttgaaattacagggaca 17142754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 17142800 - 17142834
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  17142800 ggaccaaaagtggaggaatctgaaattacagggac 17142834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 26385440 - 26385474
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggac 162  Q
    |||||||||||||| ||||||||||||||||||||    
T  26385440 ggaccaaaagtggaggaatctgaaattacagggac 26385474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 33637702 - 33637632
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||  ||||| |  ||||||||||||||||||||| |||||||| | |||||||    
T  33637702 tatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaattacaagaacaaaat 33637632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 34884605 - 34884567
Alignment:
Q  194 taaaactggaattcactaatattacaaggacgaaaagag 232  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  34884605 taaaaccgaaattcactaatattacaaggacgaaaagag 34884567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 30459136 - 30459196
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattaca 157  Q
    |||| ||||| |||||||||| ||||| |||| ||||||||||| |||||||||||||||||    
T  30459136 tatggagattatgctaacgtgatgaaa-ggagagaccaaaagtgaaagaatctgaaattaca 30459196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32017743 - 32017696
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccct 49  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| |||||    
T  32017743 gcataaattacatccctgtaatttcaaattcct-ccacttttggtccct 32017696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 1550 - 1711
Alignment:
Q  2 cataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatgc 101  Q
    |||||||||||||||| |||||| | |||||||||||||||| ||| |||||||||||||| ||||| |||| ||||||||||||||||| |||||||||    
T  1550 cataaattacgtccctataatttcagattcctcccacttttggtccttgtaatttcagattactccacttttggtccctcattttacgtgccatgtatgc 1649  T
Q  102 agattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    ||||| |||| | |||||||  ||  |||||||||||||||||||||||||||||| |||||    
T  1650 agattctgctgatgtggtgatgtgagggaccaaaagtggaagaatctgaaattacaaggaca 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 1553 - 1487
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||| ||||| |||| ||||| ||||| |  ||||||||||||||||||||||||||||||||||||    
T  1553 tatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggaca 1487  T

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Target: scaffold0185 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4108 - 3946
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    |||||||||| ||| ||||||||| | |||||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||||| || ||||| ||    
T  4108 gcataaattatgtctctgtaatttcagattcctcccacttttggtcactgtaatttcatattcctccacttttggtccctcattttacttgccatgtgtg 4009  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||| |||| || ||||||||||   |||||| ||||||||||| ||||||||||||||||    
T  4008 cagattctgctgacatggtgaaatgagcgaccaacagtggaagaatttgaaattacagggaca 3946  T

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Target: scaffold0185; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 4104 - 4164
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattaca 157  Q
    |||||||||| |||| ||||| ||||| |  ||||||||| || |||||||||||||||||    
T  4104 tatgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctgaaattaca 4164  T

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Target: scaffold0881 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 458 - 305
Alignment:
Q  1 gcataaattacgtccctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagtccctcattttacgtgtcatgtatg 100  Q
    ||||||||||||||  |||||||| | |||||||||  ||||| |||||||||||||||||||||| | |||| ||||||||||||||||  ||||||||    
T  458 gcataaattacgtct-tgtaatttcagattcctcccgattttggtccctgtaatttcagattcctctacttttggtccctcattttacgtaccatgtatg 360  T
Q  101 cagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaatta 155  Q
    || ||| |||| | |||||| ||||  ||||||||||||||||||||||||||||    
T  359 caaattctgcttatgtggtggaatgagggaccaaaagtggaagaatctgaaatta 305  T

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Target: scaffold0477 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 4934 - 5053
Alignment:
Q  49 tgtaatttcagattcctcc-atttttagtccctcattttacgtgtcatgtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatc 147  Q
    |||||||||| ||| |||| | |||| ||||||||||||||||| |||||||| ||||| |||| |||||||| ||||  ||||||||||||||||||||    
T  4934 tgtaatttcatatttctcccacttttggtccctcattttacgtgccatgtatgtagattctgcttacgtggtggaatgagggaccaaaagtggaagaatc 5033  T
Q  148 tgaaattacagggacaaaat 167  Q
    | ||||||||||||| ||||    
T  5034 taaaattacagggactaaat 5053  T

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Target: scaffold0477; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 5078 - 5122
Alignment:
Q  195 aaaactggaattcactaatattacaaggacgaaaagagtatttac 239  Q
    ||||| ||||||| ||||||||||| |||||||||| ||||||||    
T  5078 aaaaccggaattcgctaatattacatggacgaaaagggtatttac 5122  T

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Target: scaffold0449 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 7427 - 7299
Alignment:
Q  44 atccctgtaatttcagattcct-ccatttttagtccctcattttacgtgtcatgtatgcag----attttgctaacgtggtgaaatggaggaccaaaagt 138  Q
    |||| ||||||||||||||||| ||| |||| ||||||||||||||||  |||||||||||    ||||||||  ||||||| ||||  ||||| |||||    
T  7427 atccttgtaatttcagattcctaccacttttggtccctcattttacgtaccatgtatgcagtcagattttgcttccgtggtggaatgagggaccgaaagt 7328  T
Q  139 ggaagaatctgaaattacagggacaaaat 167  Q
    |||||||| ||||||||||||||||||||    
T  7327 ggaagaatatgaaattacagggacaaaat 7299  T

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Target: scaffold0449; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 7466 - 7504
Alignment:
Q  129 gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  7466 gaccaaaagtagaagaatctgaaattacagggacaaaat 7504  T

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Target: scaffold0117 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 12216 - 12287
Alignment:
Q  96 gtatgcagattttgctaacgtggtgaaatggaggaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    ||||||||||| |||| ||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  12216 gtatgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaat 12287  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 15867 - 15937
Alignment:
Q  97 tatgcagattttgctaacgtggtgaaatggag-gaccaaaagtggaagaatctgaaattacagggacaaaat 167  Q
    |||||||||| |||| ||||| ||||| |||| ||||||||||| |||||| ||||||||||||||||||||    
T  15867 tatgcagattctgctgacgtgatgaaa-ggagagaccaaaagtgaaagaatatgaaattacagggacaaaat 15937  T

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Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 15857 - 15797
Alignment:
Q  16 ctgtaattttaaattcctcccacttttgatccctgtaatttcagattcctccatttttagt 76  Q
    ||||||||| | |||||||||||||||| || ||||||||||| ||||||| | |||||||    
T  15857 ctgtaatttcagattcctcccacttttggtctctgtaatttcaaattcctcaacttttagt 15797  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 4779 - 4744
Alignment:
Q  128 ggaccaaaagtggaagaatctgaaattacagggaca 163  Q
    |||||||||||||| |||||||||||||||||||||    
T  4779 ggaccaaaagtggaggaatctgaaattacagggaca 4744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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