View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9821_low_11 (Length: 332)
Name: NF9821_low_11
Description: NF9821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9821_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 29 - 325
Target Start/End: Complemental strand, 8446453 - 8446157
Alignment:
| Q |
29 |
ttgataaactctagaagaattatttctatgttggtggctcgatgaaggaaatagatcaaagtgaaagtgattgttgttcagtttgtttaagccaaatgtg |
128 |
Q |
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| T |
8446453 |
ttgataaactctacaagaattatttctatgttggtggctcaatgaaggaaatagatcaaagtgaaagtgattgttgttcagtttgtttaagccaaatgtg |
8446354 |
T |
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| Q |
129 |
tagaggggaaaaagttaaggtattacctttatgtgatcatagatatcatgctgattgtattggtgcttggttgaagaacaatactacatgtccactttgt |
228 |
Q |
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| T |
8446353 |
tagaggggaaaaagttagggtattacctttatgtgatcatagatatcatgctgattgtattggtgcttggttgaagaacaataccacatgtccactttgt |
8446254 |
T |
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| Q |
229 |
agaagcaaaatcagtaaccatagttttaatctgaatctgcaaaaattggtgaatccttttgaagaatctttggttgaccttatacagagtttctctg |
325 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8446253 |
agaagcaaaatcagtaaccatagttataatctgaatctgcaaaaattggtgaatccttttgaagaatctttggttgaccttatacagagtttctctg |
8446157 |
T |
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