View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9822_low_8 (Length: 241)
Name: NF9822_low_8
Description: NF9822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9822_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 41027787 - 41027566
Alignment:
| Q |
1 |
tcctttattcctcaaagtggttagtggcgttacaaacaaggaaagtgaattttttgtgtcattgtcaggtcctactttgttttgactcaaccctaagggt |
100 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |
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| T |
41027787 |
tcctttattcctcaaagtggttagtggtgttacaaacaaggaaagtgaattttttgtgtcattgtcaagtcctactttgttttgactcaatcctgagggt |
41027688 |
T |
|
| Q |
101 |
ctgacgacccacatactaaatcagtggtcttgagaaagaaccgcctatttcgatcggttgggaggcttcctcgcttaattatttaatcgcctatttgttg |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41027687 |
ctgacgacccacatactgaatcagtggtcttgagaaagaaccgcctatttcgatcggttgggaggcttcctcgcttaattatttaatcgcctatttgttg |
41027588 |
T |
|
| Q |
201 |
agatacatcaacatgatgatta |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
41027587 |
agatacatcaacatgatgatta |
41027566 |
T |
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