View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9822_low_9 (Length: 237)

Name: NF9822_low_9
Description: NF9822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9822_low_9
NF9822_low_9
[»] chr5 (14 HSPs)
chr5 (117-223)||(41334657-41334763)
chr5 (114-223)||(2614643-2614752)
chr5 (117-222)||(7617133-7617238)
chr5 (117-223)||(18033982-18034088)
chr5 (115-223)||(22512303-22512411)
chr5 (119-222)||(5256997-5257100)
chr5 (117-223)||(33801469-33801575)
chr5 (116-211)||(32473400-32473495)
chr5 (117-222)||(38470579-38470684)
chr5 (125-223)||(39122427-39122524)
chr5 (117-211)||(17208074-17208168)
chr5 (117-192)||(33855068-33855143)
chr5 (117-211)||(30622725-30622818)
chr5 (119-199)||(25915006-25915085)
[»] chr8 (29 HSPs)
chr8 (112-223)||(11582761-11582872)
chr8 (117-223)||(36743477-36743583)
chr8 (115-223)||(29705360-29705468)
chr8 (119-222)||(26125637-26125740)
chr8 (119-222)||(42295197-42295300)
chr8 (117-223)||(30660736-30660842)
chr8 (117-223)||(42197429-42197535)
chr8 (118-223)||(45397317-45397422)
chr8 (119-222)||(29800945-29801048)
chr8 (119-215)||(42699259-42699355)
chr8 (125-223)||(31384672-31384770)
chr8 (117-222)||(5754903-5755008)
chr8 (116-223)||(1375541-1375648)
chr8 (119-222)||(20148762-20148865)
chr8 (117-223)||(2165957-2166063)
chr8 (117-223)||(2546996-2547102)
chr8 (117-211)||(35181516-35181610)
chr8 (106-211)||(34304777-34304882)
chr8 (119-223)||(30912556-30912660)
chr8 (117-211)||(18066724-18066818)
chr8 (117-210)||(16603633-16603726)
chr8 (159-222)||(9241594-9241657)
chr8 (119-203)||(33630007-33630091)
chr8 (119-222)||(3743773-3743876)
chr8 (117-223)||(40528628-40528735)
chr8 (118-211)||(16358839-16358933)
chr8 (117-161)||(19386626-19386670)
chr8 (115-152)||(28977144-28977181)
chr8 (158-211)||(10678158-10678211)
[»] chr3 (28 HSPs)
chr3 (116-223)||(36150129-36150236)
chr3 (118-223)||(54237097-54237202)
chr3 (109-223)||(25413672-25413787)
chr3 (115-222)||(45126923-45127030)
chr3 (117-223)||(46941053-46941159)
chr3 (117-223)||(54246142-54246248)
chr3 (117-222)||(24688397-24688502)
chr3 (118-223)||(40480750-40480855)
chr3 (114-223)||(42100685-42100794)
chr3 (118-223)||(42394413-42394518)
chr3 (119-223)||(27748565-27748669)
chr3 (117-223)||(40808865-40808971)
chr3 (119-223)||(53581852-53581956)
chr3 (112-223)||(47191020-47191130)
chr3 (117-211)||(4190271-4190365)
chr3 (117-211)||(9434124-9434218)
chr3 (117-211)||(10457898-10457992)
chr3 (117-222)||(53273679-53273784)
chr3 (117-205)||(25996268-25996356)
chr3 (115-211)||(34791827-34791923)
chr3 (159-222)||(52629870-52629933)
chr3 (121-219)||(29558232-29558330)
chr3 (113-211)||(51757589-51757687)
chr3 (132-223)||(51249323-51249414)
chr3 (117-211)||(52627983-52628077)
chr3 (113-202)||(1078223-1078311)
chr3 (117-223)||(11064716-11064820)
chr3 (160-211)||(19148822-19148873)
[»] chr6 (18 HSPs)
chr6 (117-223)||(7292747-7292853)
chr6 (117-223)||(9698327-9698433)
chr6 (115-223)||(13743215-13743323)
chr6 (115-223)||(13748715-13748823)
chr6 (119-223)||(24203981-24204085)
chr6 (117-223)||(26670003-26670109)
chr6 (117-222)||(7273330-7273435)
chr6 (117-223)||(26466799-26466905)
chr6 (116-222)||(30014342-30014448)
chr6 (117-222)||(7367549-7367654)
chr6 (119-211)||(27441544-27441636)
chr6 (117-222)||(3213400-3213505)
chr6 (119-222)||(30735984-30736087)
chr6 (117-223)||(21279929-21280035)
chr6 (117-222)||(21293672-21293777)
chr6 (117-211)||(33242403-33242497)
chr6 (114-213)||(33253910-33254009)
chr6 (117-207)||(31109232-31109322)
[»] chr7 (29 HSPs)
chr7 (114-223)||(24001006-24001115)
chr7 (116-223)||(42538425-42538532)
chr7 (117-223)||(41861674-41861782)
chr7 (116-223)||(5810918-5811025)
chr7 (117-222)||(35069721-35069826)
chr7 (119-222)||(10573751-10573854)
chr7 (120-223)||(26898396-26898499)
chr7 (119-223)||(43343618-43343722)
chr7 (119-223)||(44416928-44417032)
chr7 (115-222)||(45326018-45326125)
chr7 (117-223)||(5015395-5015501)
chr7 (119-223)||(4638193-4638297)
chr7 (119-222)||(44326180-44326283)
chr7 (117-223)||(9216302-9216407)
chr7 (117-223)||(42972852-42972958)
chr7 (133-222)||(27393255-27393344)
chr7 (117-223)||(5194225-5194331)
chr7 (117-205)||(40236919-40237007)
chr7 (116-211)||(31513286-31513381)
chr7 (117-223)||(24280590-24280696)
chr7 (117-223)||(43317443-43317549)
chr7 (126-222)||(32029812-32029908)
chr7 (118-211)||(31408639-31408732)
chr7 (119-223)||(16180351-16180454)
chr7 (159-222)||(38160574-38160637)
chr7 (117-203)||(27535245-27535331)
chr7 (116-184)||(39998407-39998475)
chr7 (117-211)||(33384870-33384965)
chr7 (117-150)||(38160661-38160694)
[»] chr2 (32 HSPs)
chr2 (115-223)||(1750412-1750520)
chr2 (117-223)||(30838632-30838738)
chr2 (117-222)||(12302248-12302353)
chr2 (118-223)||(19047158-19047263)
chr2 (115-219)||(16096745-16096849)
chr2 (119-222)||(43490396-43490499)
chr2 (112-211)||(12415466-12415565)
chr2 (112-211)||(12427526-12427625)
chr2 (117-223)||(4764720-4764826)
chr2 (117-211)||(43114557-43114651)
chr2 (117-222)||(43335758-43335863)
chr2 (119-211)||(11825660-11825752)
chr2 (119-211)||(41281980-41282072)
chr2 (117-211)||(16803968-16804062)
chr2 (117-211)||(16843250-16843344)
chr2 (118-223)||(34817770-34817875)
chr2 (115-222)||(13780730-13780837)
chr2 (117-210)||(18491705-18491798)
chr2 (119-211)||(33229303-33229396)
chr2 (119-223)||(8896577-8896681)
chr2 (114-223)||(42849853-42849949)
chr2 (112-211)||(966840-966939)
chr2 (117-213)||(34895745-34895841)
chr2 (119-202)||(6518484-6518566)
chr2 (117-199)||(14285676-14285758)
chr2 (159-223)||(39149286-39149350)
chr2 (119-202)||(4299435-4299518)
chr2 (144-211)||(4451956-4452023)
chr2 (117-223)||(42026767-42026875)
chr2 (114-150)||(7070413-7070449)
chr2 (114-144)||(42849964-42849994)
chr2 (113-145)||(36168990-36169022)
[»] chr1 (25 HSPs)
chr1 (116-223)||(43571080-43571187)
chr1 (117-223)||(5489776-5489882)
chr1 (117-223)||(23989517-23989624)
chr1 (117-223)||(48498956-48499062)
chr1 (117-222)||(37814778-37814883)
chr1 (115-211)||(48119626-48119722)
chr1 (117-211)||(44112677-44112771)
chr1 (115-211)||(38335916-38336012)
chr1 (116-211)||(35003293-35003388)
chr1 (117-223)||(24769493-24769599)
chr1 (116-222)||(50448255-50448361)
chr1 (119-223)||(4401329-4401434)
chr1 (119-223)||(7447828-7447931)
chr1 (119-222)||(2497557-2497660)
chr1 (117-223)||(750299-750405)
chr1 (117-211)||(41065153-41065247)
chr1 (117-211)||(46168383-46168477)
chr1 (117-211)||(45427751-45427845)
chr1 (117-210)||(38113202-38113295)
chr1 (167-223)||(4888093-4888149)
chr1 (117-211)||(45639738-45639832)
chr1 (112-211)||(35000119-35000218)
chr1 (117-211)||(26585462-26585556)
chr1 (117-211)||(45705825-45705919)
chr1 (117-164)||(14427347-14427394)
[»] scaffold0119 (1 HSPs)
scaffold0119 (117-223)||(685-791)
[»] chr4 (41 HSPs)
chr4 (117-223)||(33703141-33703247)
chr4 (16-116)||(48492539-48492639)
chr4 (117-222)||(23035980-23036085)
chr4 (117-222)||(25051693-25051798)
chr4 (117-222)||(27864564-27864669)
chr4 (114-222)||(27316708-27316816)
chr4 (112-223)||(28982816-28982927)
chr4 (117-222)||(1771261-1771366)
chr4 (114-223)||(35017730-35017838)
chr4 (117-222)||(55966341-55966446)
chr4 (119-222)||(27893837-27893940)
chr4 (117-222)||(27550309-27550414)
chr4 (119-223)||(43949795-43949900)
chr4 (117-211)||(711960-712054)
chr4 (113-211)||(17619158-17619256)
chr4 (120-222)||(23204773-23204875)
chr4 (119-223)||(39631102-39631207)
chr4 (118-223)||(41878407-41878512)
chr4 (117-222)||(48463445-48463550)
chr4 (119-223)||(43514680-43514784)
chr4 (116-223)||(12496955-12497062)
chr4 (117-223)||(28988473-28988579)
chr4 (115-223)||(45490307-45490415)
chr4 (119-222)||(31680904-31681007)
chr4 (116-211)||(55272382-55272477)
chr4 (117-223)||(21687006-21687112)
chr4 (119-223)||(43735744-43735848)
chr4 (117-197)||(960890-960970)
chr4 (119-211)||(3756252-3756344)
chr4 (117-211)||(32728357-32728451)
chr4 (119-205)||(35037007-35037093)
chr4 (117-213)||(48435583-48435679)
chr4 (117-223)||(41847971-41848077)
chr4 (119-211)||(41327549-41327641)
chr4 (170-222)||(46412464-46412516)
chr4 (159-223)||(51512259-51512323)
chr4 (117-202)||(46827721-46827806)
chr4 (119-211)||(38851515-38851607)
chr4 (112-152)||(36004169-36004209)
chr4 (117-197)||(49229684-49229764)
chr4 (158-211)||(56215903-56215956)
[»] scaffold0038 (1 HSPs)
scaffold0038 (118-223)||(112656-112761)
[»] scaffold0187 (2 HSPs)
scaffold0187 (117-223)||(14182-14288)
scaffold0187 (117-223)||(24510-24616)
[»] scaffold0385 (1 HSPs)
scaffold0385 (117-221)||(11251-11355)
[»] scaffold0003 (1 HSPs)
scaffold0003 (119-211)||(45725-45817)
[»] scaffold0157 (1 HSPs)
scaffold0157 (116-223)||(23415-23522)
[»] scaffold0100 (1 HSPs)
scaffold0100 (116-211)||(35462-35557)


Alignment Details
Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 41334763 - 41334657
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T
Q  217 ctatttg 223  Q
    |||||||    
T  41334663 ctatttg 41334657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 2614752 - 2614643
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    |||||||||||||||||||||||||||||||| |||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2614752 tatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 2614653  T
Q  214 attctatttg 223  Q
     |||||||||    
T  2614652 cttctatttg 2614643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 7617133 - 7617238
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7617133 ggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7617232  T
Q  217 ctattt 222  Q
    ||||||    
T  7617233 ctattt 7617238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 18033982 - 18034088
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| |||||   ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 18034081  T
Q  217 ctatttg 223  Q
    |||||||    
T  18034082 ctatttg 18034088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 22512303 - 22512411
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||||||||||| |||||   ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||     
T  22512303 atggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatc 22512402  T
Q  215 ttctatttg 223  Q
    |||||||||    
T  22512403 ttctatttg 22512411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 5256997 - 5257100
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| |||||| |||||||||||| |  ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttct 5257096  T
Q  219 attt 222  Q
    ||||    
T  5257097 attt 5257100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 33801469 - 33801575
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||| ||||||||  ||||||  ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  33801469 ggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 33801568  T
Q  217 ctatttg 223  Q
    |||||||    
T  33801569 ctatttg 33801575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 32473495 - 32473400
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||||  ||| ||||||||||||||||||| ||||||||||||||| |||||    
T  32473495 tggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatacttt 32473400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 38470579 - 38470684
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| |||||||||||||||||||    ||| ||||||| |||||||| |||||||||||||| ||||| |||||| |||||||||| ||    
T  38470579 ggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatctt 38470678  T
Q  217 ctattt 222  Q
    ||||||    
T  38470679 ctattt 38470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 223
Target Start/End: Complemental strand, 39122524 - 39122427
Alignment:
Q  125 ttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctatttg 223  Q
    ||||||||||||| |||||||||||| |  |||| |||||| |||||||||| |||||||||||| ||||||||||||| ||||||||| |||||||||    
T  39122524 ttacatgaacaccttttattcatacatctaattagacaccc-atgtattaggaatattttggtaaattcatctcacaactacactttatcttctatttg 39122427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 17208074 - 17208168
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||| ||||||||||||| ||||||||  |||| ||||||| ||| |||| ||| |||||||||| ||||||||||||||| |||||    
T  17208074 ggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatacttt 17208168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 33855143 - 33855068
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagtt 192  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||| |||||||||| | |||||||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagtt 33855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 30622818 - 30622725
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||| |||||| ||||||||| |||| || | || ||| |||| |||||||||||||| || |||||||||||| |||||    
T  30622818 ggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcacaaccatacttt 30622725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 25915085 - 25915006
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctca 199  Q
    ||||||||||||||||||||||||||| ||||||  ||| ||||||| |||||||| | ||||||| ||| ||||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtatta-gaatatttttgtaggttcatctca 25915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 11582761 - 11582872
Alignment:
Q  112 attatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||||||||||| |||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11582761 attatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 11582860  T
Q  212 atattctatttg 223  Q
    || |||||||||    
T  11582861 atcttctatttg 11582872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 36743583 - 36743477
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| |||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 36743484  T
Q  217 ctatttg 223  Q
    |||||||    
T  36743483 ctatttg 36743477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 29705360 - 29705468
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||||||||||  ||||||  ||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||     
T  29705360 atggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatc 29705459  T
Q  215 ttctatttg 223  Q
    |||||||||    
T  29705460 ttctatttg 29705468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 26125637 - 26125740
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| |||||||||||||||||||    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 26125736  T
Q  219 attt 222  Q
    ||||    
T  26125737 attt 26125740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 42295197 - 42295300
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||||||||||||| ||||||  ||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 42295296  T
Q  219 attt 222  Q
    ||||    
T  42295297 attt 42295300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 30660842 - 30660736
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  |||| |  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  30660842 ggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatctt 30660743  T
Q  217 ctatttg 223  Q
    |||||||    
T  30660742 ctatttg 30660736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 42197535 - 42197429
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||| ||||||| ||||||  |||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42197436  T
Q  217 ctatttg 223  Q
    |||||||    
T  42197435 ctatttg 42197429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 45397317 - 45397422
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    ||||||||||| |||||||||||||||| ||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaaccacaatttatcttc 45397416  T
Q  218 tatttg 223  Q
    ||||||    
T  45397417 tatttg 45397422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 29801048 - 29800945
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| |||||| |||||||||||| |  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 29800949  T
Q  219 attt 222  Q
    ||||    
T  29800948 attt 29800945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 42699259 - 42699355
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    ||||||||||||||||||||||||||| ||||||  ||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccacactttatat 42699355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 31384672 - 31384770
Alignment:
Q  125 ttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctatttg 223  Q
    ||||||||||||||||||||| ||||   |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatcttctatttg 31384770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 5754903 - 5755008
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||| ||||||| |||| |  ||| |||| || || |||||||||||||||||||||||||||||||||||||||||||| ||    
T  5754903 ggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatctt 5755002  T
Q  217 ctattt 222  Q
    ||||||    
T  5755003 ctattt 5755008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 1375541 - 1375648
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    |||||||| ||||||||||||| ||||||||||||||  ||| ||||||| || |||||||||||||||||||| || |||||||||| ||||||||| |    
T  1375541 tggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatct 1375640  T
Q  216 tctatttg 223  Q
    ||||||||    
T  1375641 tctatttg 1375648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 20148762 - 20148865
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| ||||||||||||||||||| |  ||| ||||||  || ||||||||||||||||||||||||||||||||||||||||||||  |||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatct 20148861  T
Q  219 attt 222  Q
    ||||    
T  20148862 attt 20148865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 2166063 - 2165957
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||| ||||||||||||| ||||||| ||||||  ||| || |||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T
Q  217 ctatttg 223  Q
    |||||||    
T  2165963 ctatttg 2165957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 2546996 - 2547102
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||||||||| |||||||  |||||   ||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  2546996 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatctt 2547095  T
Q  217 ctatttg 223  Q
    |||||||    
T  2547096 ctatttg 2547102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 35181516 - 35181610
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||||||| |||||||||| ||||||||||||||| |||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatacttt 35181610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 34304777 - 34304882
Alignment:
Q  106 gtttagattatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaacca 205  Q
    ||||| |||| ||||||||||||||||||| |||||| ||||||||| |||| ||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  34304777 gtttatattaaggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaacca 34304876  T
Q  206 cacttt 211  Q
     |||||    
T  34304877 tacttt 34304882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 30912660 - 30912556
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||||||||||||| ||||||  ||| |||||   ||||||||||| |||||||||||||||||||||||||| ||| |||| ||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaaccgcaccttatcttct 30912561  T
Q  219 atttg 223  Q
    |||||    
T  30912560 atttg 30912556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 18066818 - 18066724
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| |||||||   |||| |||| || |||||||||||||||||| |||| ||||||||||||||| |||||    
T  18066818 ggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatacttt 18066724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 16603726 - 16603633
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactt 210  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||| ||| ||||  || |||||||||| ||||||||||||||| ||||    
T  16603726 ggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatactt 16603633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 9241594 - 9241657
Alignment:
Q  159 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctattt 222  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  9241594 tacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatcttctattt 9241657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 33630091 - 33630007
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaac 203  Q
    ||||||||||| |||||||||||| |||||||||  ||| ||||||||||| |||||||| ||||| |||| |||||||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaac 33630007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 3743773 - 3743876
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||| |||  ||||||||||||||| |  |  ||||||||||| || ||||| | |||||||| ||||||||||||||||||||||||||| ||||    
T  3743773 aaaatgttccatatacaccctttattcatccctcccattatacaccccatatattaagtatattttgataagttcatctcacaaccacactttatcttct 3743872  T
Q  219 attt 222  Q
    ||||    
T  3743873 attt 3743876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 40528735 - 40528628
Alignment:
Q  117 ggaaaatgttacatgaacacccttt-attcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    |||||||  |||||||||||||||| ||||| | |||  ||| ||||||| || ||||||||| |||||| ||| || |||||||||||||||||| | |    
T  40528735 ggaaaataatacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttctct 40528636  T
Q  216 tctatttg 223  Q
    ||||||||    
T  40528635 tctatttg 40528628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 16358933 - 16358839
Alignment:
Q  118 gaaaatgttacat-gaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||| ||| |||||||| ||||||||| |||| |||| || ||| |||| | |||||||| ||| ||||||||||||||| |||||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatacttt 16358839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 19386670 - 19386626
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatac 161  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  19386670 ggaaaatgttacatgaacaccctttaatcatacaccctattatac 19386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 28977144 - 28977181
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacacc 152  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  28977144 atggaaaatgttacatgaacaccctttattcctacacc 28977181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 10678211 - 10678158
Alignment:
Q  158 atacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||| || ||||| ||| |||||||||| ||||||||||||||| |||||    
T  10678211 atacaccccatatattaaggacattttggtaaattcatctcacaaccatacttt 10678158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 36150129 - 36150236
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  36150129 tggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatct 36150228  T
Q  216 tctatttg 223  Q
    ||||||||    
T  36150229 tctatttg 36150236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 54237097 - 54237202
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    |||||||||||||||||||||||||||| |||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 54237196  T
Q  218 tatttg 223  Q
    ||||||    
T  54237197 tatttg 54237202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 25413672 - 25413787
Alignment:
Q  109 tagattat-ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccaca 207  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||  ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  25413672 tagattataggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccaca 25413771  T
Q  208 ctttatattctatttg 223  Q
    |||||| |||||||||    
T  25413772 ctttatcttctatttg 25413787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 45127030 - 45126923
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    |||||||||||||||| ||||||||||||||||||| |  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  45127030 atggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatt 45126931  T
Q  215 ttctattt 222  Q
    ||||||||    
T  45126930 ttctattt 45126923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 46941053 - 46941159
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| |||| |  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 46941152  T
Q  217 ctatttg 223  Q
    |||||||    
T  46941153 ctatttg 46941159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 54246248 - 54246142
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatctt 54246149  T
Q  217 ctatttg 223  Q
    |||||||    
T  54246148 ctatttg 54246142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 24688502 - 24688397
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  |||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24688502 ggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24688403  T
Q  217 ctattt 222  Q
    ||||||    
T  24688402 ctattt 24688397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 40480750 - 40480855
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    |||||||||||||||||||||||||||||||  ||  ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 40480849  T
Q  218 tatttg 223  Q
    ||||||    
T  40480850 tatttg 40480855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 42100685 - 42100794
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    |||||||||||||||||||||||||||||||| ||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  42100685 tatggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacattttat 42100784  T
Q  214 attctatttg 223  Q
     || ||||||    
T  42100785 cttttatttg 42100794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 42394518 - 42394413
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    |||||||||||||||||||||||||||| ||||    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 42394419  T
Q  218 tatttg 223  Q
    ||||||    
T  42394418 tatttg 42394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 27748565 - 27748669
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatcttct 27748664  T
Q  219 atttg 223  Q
    |||||    
T  27748665 atttg 27748669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 40808865 - 40808971
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| |||||| ||||||| ||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40808865 ggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40808964  T
Q  217 ctatttg 223  Q
    |||||||    
T  40808965 ctatttg 40808971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 53581956 - 53581852
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||||||||| ||||||||||||||   ||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatcttct 53581857  T
Q  219 atttg 223  Q
    |||||    
T  53581856 atttg 53581852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 47191130 - 47191020
Alignment:
Q  112 attatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||| ||||||||||||||||||||||||||||| ||||||  ||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  47191130 attaaggaaaatgttacatgaacaccctttattcctacacctcattgtacaccc-atgtattagagatattttgataagttcatctcacaaccacacttt 47191032  T
Q  212 atattctatttg 223  Q
    || |||||||||    
T  47191031 atcttctatttg 47191020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 4190365 - 4190271
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||| ||||||||||||| ||||||||||||||| |||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatacttt 4190271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 9434124 - 9434218
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||  |||| ||||||| ||| |||||||| |||||||||| ||||||||||||||| |||||    
T  9434124 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatacttt 9434218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 10457992 - 10457898
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||| |||| ||||||||| |||| ||||||| ||| |||| |||||||||||||| || |||||||||||| |||||    
T  10457992 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatacttt 10457898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 53273784 - 53273679
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||| ||||||| | ||||||| || |||  ||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  53273784 ggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatctt 53273685  T
Q  217 ctattt 222  Q
     |||||    
T  53273684 ttattt 53273679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 25996268 - 25996356
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaacca 205  Q
    |||||||||||||||||||||||||| ||||||| | |||| ||||||| || ||||| ||| |||||||||| |||||||||||||||    
T  25996268 ggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaacca 25996356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 34791827 - 34791923
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||||| |||||||||||||| || |||  ||| |||||||| |||||  ||| ||||||||||||||| |||||    
T  34791827 atggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatacttt 34791923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 52629870 - 52629933
Alignment:
Q  159 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctattt 222  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  52629870 tacaccctatgtattaaggatatttttgtaagttcatctcacaaccacactttatcttctattt 52629933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 29558330 - 29558232
Alignment:
Q  121 aatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattcta 219  Q
    ||||||| |||||||||||||||||||||| |  ||| |||||||||| ||||||| |||| ||||||| |||||||||||| |||| ||||| |||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcacaatcacattttattttcta 29558232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 51757589 - 51757687
Alignment:
Q  113 ttatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||| |||||| ||||||||||| ||||||||| |||| ||||||  ||| |||| ||| ||||| |||| ||||||||||||||| |||||    
T  51757589 ttatggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatacttt 51757687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 51249323 - 51249414
Alignment:
Q  132 aacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctatttg 223  Q
    |||||||||||||||  || |  ||||||||||  ||| |||| |||||||||||||| ||||||||||||||||||||| | |||||||||    
T  51249323 aacaccctttattcacccaacccattatacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctcttctatttg 51249414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 52628077 - 52627983
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||| ||||||||||||| ||||||| | |||| ||||||  ||| |||| | |||||||||||| |||||||||||| || |||||    
T  52628077 ggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatacttt 52627983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 1078223 - 1078311
Alignment:
Q  113 ttatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaa 202  Q
    ||||| ||||||||||||||||||||||||||| | ||||  ||| ||||||  |||||||| ||||||||| ||| |||||||||||||    
T  1078223 ttatgaaaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtatta-ggatatttttgtaggttcatctcacaa 1078311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 11064820 - 11064716
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||  |||||| | ||||||||||||||  ||| |||||||||||  |||| ||||||||| | | ||||||||| || |||||||  | ||    
T  11064820 ggaaaatgtta--tgaacatcatttattcatacacctcattgtacaccctatgctttagagatattttgattaattcatctcataatcacacttactctt 11064723  T
Q  217 ctatttg 223  Q
    |||||||    
T  11064722 ctatttg 11064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 19148822 - 19148873
Alignment:
Q  160 acaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||| ||||| |||| || ||||||||| ||||||||    
T  19148822 acaccctatgtattagggacattttagtaaatttatctcacaatcacacttt 19148873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 7292747 - 7292853
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7292747 ggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7292846  T
Q  217 ctatttg 223  Q
    |||||||    
T  7292847 ctatttg 7292853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 9698433 - 9698327
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| |||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 9698334  T
Q  217 ctatttg 223  Q
    |||||||    
T  9698333 ctatttg 9698327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 13743323 - 13743215
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||| |||||||||||| |  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  13743323 atggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 13743224  T
Q  215 ttctatttg 223  Q
    |||||||||    
T  13743223 ttctatttg 13743215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 13748823 - 13748715
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||| |||||||||||| |  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  13748823 atggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 13748724  T
Q  215 ttctatttg 223  Q
    |||||||||    
T  13748723 ttctatttg 13748715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 24204085 - 24203981
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||||| ||||||| |||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatattct 24203986  T
Q  219 atttg 223  Q
    |||||    
T  24203985 atttg 24203981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 26670109 - 26670003
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26670010  T
Q  217 ctatttg 223  Q
    |||||||    
T  26670009 ctatttg 26670003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 7273435 - 7273330
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| |||||| |||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttatctt 7273336  T
Q  217 ctattt 222  Q
    ||||||    
T  7273335 ctattt 7273330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 26466799 - 26466905
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| |||||||||||||| ||||||  ||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatctt 26466898  T
Q  217 ctatttg 223  Q
    |||||||    
T  26466899 ctatttg 26466905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 30014342 - 30014448
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    |||||||||||||||||||||||||||||| |||| |  |||||||| || |||||||||| |||||||||||||||||||||||||||| ||||||| |    
T  30014342 tggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatct 30014441  T
Q  216 tctattt 222  Q
    |||||||    
T  30014442 tctattt 30014448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 7367549 - 7367654
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||| ||||||| | ||||||||||||||  ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7367549 ggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacactttatttt 7367648  T
Q  217 ctattt 222  Q
    ||||||    
T  7367649 ctattt 7367654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 27441544 - 27441636
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||| ||||||||| |||| |||| ||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatacttt 27441636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 3213400 - 3213505
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| ||||||||||||||||||| |  ||| ||||||| |||||||| |||||||||||||| ||||| ||||||||| ||||||| ||    
T  3213400 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatctt 3213499  T
Q  217 ctattt 222  Q
    ||||||    
T  3213500 ctattt 3213505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 30735984 - 30736087
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||||  ||||||| ||||||  ||| ||||||  ||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatcttct 30736083  T
Q  219 attt 222  Q
    ||||    
T  30736084 attt 30736087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 21279929 - 21280035
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  ||||    |||  ||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  21279929 ggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatctt 21280028  T
Q  217 ctatttg 223  Q
    |||||||    
T  21280029 ctatttg 21280035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 21293777 - 21293672
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| |||||||||||||||||||    | | ||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||| ||    
T  21293777 ggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 21293678  T
Q  217 ctattt 222  Q
    ||||||    
T  21293677 ctattt 21293672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 33242403 - 33242497
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||| |||| ||||||||| |||| ||||||| |||||||| ||| |||||||||| |||||||||||| || |||||    
T  33242403 ggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatacttt 33242497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 33253910 - 33254009
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    |||||||||||||||||||||||| |||| ||| ||||| |||| ||||||| ||| |||||||| || ||||||| |||||||||||| || |||||||    
T  33253910 tatggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttat 33254009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 31109322 - 31109232
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccaca 207  Q
    |||||||||||||||||||||||||| ||||||| |  ||||||||||| ||| | ||||||||||||| ||| |||| || || ||||||    
T  31109322 ggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccaca 31109232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 24001115 - 24001006
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    |||||||||||||||||||||||||||||||| |||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24001115 tatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 24001016  T
Q  214 attctatttg 223  Q
     |||||||||    
T  24001015 cttctatttg 24001006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 42538532 - 42538425
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    |||||||||||||||||||||||||||||| |||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42538532 tggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 42538433  T
Q  216 tctatttg 223  Q
    ||||||||    
T  42538432 tctatttg 42538425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 41861674 - 41861782
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtat--tagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||     
T  41861674 ggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcacaaccacactttatc 41861773  T
Q  215 ttctatttg 223  Q
    |||||||||    
T  41861774 ttctatttg 41861782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 5811025 - 5810918
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    ||||||||||||||||| |||||||||||| ||||||  ||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |    
T  5811025 tggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatct 5810926  T
Q  216 tctatttg 223  Q
    ||||||||    
T  5810925 tctatttg 5810918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 35069721 - 35069826
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||||||||| |||||||| ||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35069721 ggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 35069820  T
Q  217 ctattt 222  Q
    ||||||    
T  35069821 ctattt 35069826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 10573751 - 10573854
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| ||||||||||||||||||| | |||| ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatcttct 10573850  T
Q  219 attt 222  Q
    ||||    
T  10573851 attt 10573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 26898499 - 26898396
Alignment:
Q  120 aaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattcta 219  Q
    |||||||||||||||||| ||||||||||||||  ||| ||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacactttatattcta 26898400  T
Q  220 tttg 223  Q
    ||||    
T  26898399 tttg 26898396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 43343722 - 43343618
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||| | ||||||  |||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttct 43343623  T
Q  219 atttg 223  Q
    |||||    
T  43343622 atttg 43343618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 44417032 - 44416928
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||| | ||||||  |||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttct 44416933  T
Q  219 atttg 223  Q
    |||||    
T  44416932 atttg 44416928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 45326018 - 45326125
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||| |||||||| |||||| |||||||||||| || ||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||     
T  45326018 atggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatc 45326117  T
Q  215 ttctattt 222  Q
    ||||||||    
T  45326118 ttctattt 45326125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 5015395 - 5015501
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||||||||| |||||||  |||||   ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5015395 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5015494  T
Q  217 ctatttg 223  Q
    |||||||    
T  5015495 ctatttg 5015501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 4638297 - 4638193
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||||| |||||||||||||   ||| ||||||| || ||||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatcttct 4638198  T
Q  219 atttg 223  Q
    |||||    
T  4638197 atttg 4638193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 44326180 - 44326283
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| ||||||||||||||||||| |  ||| ||||||  || ||||||||||||||||||||||||||||||||||||||||||||  |||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatct 44326279  T
Q  219 attt 222  Q
    ||||    
T  44326280 attt 44326283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 9216302 - 9216407
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| || | | |||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||| ||    
T  9216302 ggaaaatgttacatgaacaccctttattcctatatcctattgtacaccc-atgcattagagatattttggtaagttcatctcacaaccacattttatctt 9216400  T
Q  217 ctatttg 223  Q
    |||||||    
T  9216401 ctatttg 9216407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 42972852 - 42972958
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||| |||||| ||||||||| |||||   ||| ||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42972951  T
Q  217 ctatttg 223  Q
    |||||||    
T  42972952 ctatttg 42972958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 27393344 - 27393255
Alignment:
Q  133 acaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctattt 222  Q
    ||||||||||||| |||| | |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctattt 27393255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 5194331 - 5194225
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||| ||||||||||||||  ||| |||||||||||| ||| |||||||||| ||| |||||||||||| |||||||  | ||    
T  5194331 ggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactctt 5194232  T
Q  217 ctatttg 223  Q
    |||||||    
T  5194231 ctatttg 5194225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 40236919 - 40237007
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaacca 205  Q
    |||||||||||||||||||||||||| ||||||| | |||| ||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  40236919 ggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaacca 40237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 31513286 - 31513381
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||| ||||| ||||||||| |||| || |||| ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  31513286 tggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatacttt 31513381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 24280696 - 24280590
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||| || ||| | |||  |||||||||||| |||||||||||| |||||||| | ||    
T  24280696 ggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctctt 24280597  T
Q  217 ctatttg 223  Q
    |||||||    
T  24280596 ctatttg 24280590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 43317443 - 43317549
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||| ||||||||||||||  ||| |||| ||||||  |||||||||||||| ||| |||||||||||| |||||||  | ||    
T  43317443 ggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacacttactctt 43317542  T
Q  217 ctatttg 223  Q
    |||||||    
T  43317543 ctatttg 43317549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 32029908 - 32029812
Alignment:
Q  126 tacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctattt 222  Q
    ||||| |||||  ||||||| ||||||  ||| ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatcttctattt 32029812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 31408732 - 31408639
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||||||| ||||||||  |||| |||| || ||| |||| |||||||||||||| ||||| ||||||||| |||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatacttt 31408639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 16180454 - 16180351
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| |||||| ||||||| ||||||  ||| ||||||| | ||||||   |||||||||||| ||||||||||||||||||||||| ||||    
T  16180454 aaaatgttacatcaacaccatttattcctacaccc-attgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatcttct 16180356  T
Q  219 atttg 223  Q
    |||||    
T  16180355 atttg 16180351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 38160637 - 38160574
Alignment:
Q  159 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctattt 222  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||    
T  38160637 tacaccccatgtattagggatattttagtaacttcatctcacaactacactttatcttctattt 38160574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 27535331 - 27535245
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaac 203  Q
    |||||||||||||||||||||||||| ||||||||  |||| ||||| | |||| |||  || |||||||||| |||||||||||||    
T  27535331 ggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaac 27535245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 39998407 - 39998475
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatatttt 184  Q
    |||||||||||||||||||||  |||| ||||||| | |||| ||||||| ||||||||||||||||||    
T  39998407 tggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 33384870 - 33384965
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacacca-tattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||| | |||| |||||||||  |||| || || | ||| |||||||| |||||||||| |||||||||||| || |||||    
T  33384870 ggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatacttt 33384965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 38160694 - 38160661
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcataca 150  Q
    ||||||||||||||||||||||||||||| ||||    
T  38160694 ggaaaatgttacatgaacaccctttattcctaca 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 1750412 - 1750520
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  1750412 atggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatc 1750511  T
Q  215 ttctatttg 223  Q
    |||||||||    
T  1750512 ttctatttg 1750520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 30838632 - 30838738
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  |||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30838632 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 30838731  T
Q  217 ctatttg 223  Q
    |||||||    
T  30838732 ctatttg 30838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 12302353 - 12302248
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  ||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 12302254  T
Q  217 ctattt 222  Q
    ||||||    
T  12302253 ctattt 12302248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 19047158 - 19047263
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    |||||||||||||||||||||||||||| ||||    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 19047257  T
Q  218 tatttg 223  Q
    ||||||    
T  19047258 tatttg 19047263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 16096745 - 16096849
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||     
T  16096745 atggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatc 16096844  T
Q  215 ttcta 219  Q
    |||||    
T  16096845 ttcta 16096849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 43490499 - 43490396
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||||||||||||| |||| |  ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatcttct 43490400  T
Q  219 attt 222  Q
    ||||    
T  43490399 attt 43490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 12415565 - 12415466
Alignment:
Q  112 attatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||||||| |||||||||| || |||||||||||| |||||    
T  12415565 attatggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatacttt 12415466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 12427625 - 12427526
Alignment:
Q  112 attatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||||||| |||||||||| || |||||||||||| |||||    
T  12427625 attatggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatacttt 12427526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 4764826 - 4764720
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| |||||| ||||||| |||||| |||| ||||||| ||||||||   |||||||||||| ||||||||||||||||||||||| ||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatctt 4764727  T
Q  217 ctatttg 223  Q
    |||||||    
T  4764726 ctatttg 4764720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 43114557 - 43114651
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||||||| |||||||||| ||||||||||||||| |||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatacttt 43114651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 43335863 - 43335758
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||| ||||||| | ||||||| ||||||  ||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  43335863 ggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatctt 43335764  T
Q  217 ctattt 222  Q
    ||||||    
T  43335763 ctattt 43335758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 11825752 - 11825660
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||||||| |||||||||| |||||||||||| || |||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatacttt 11825660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 41282072 - 41281980
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||||||| |||||| ||| ||||||||||||||| |||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatacttt 41281980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 16803968 - 16804062
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||| || ||| |||||||| |||||| ||| ||||||||||||||| |||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatacttt 16804062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 16843250 - 16843344
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||| || ||| |||||||| |||||| ||| ||||||||||||||| |||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatacttt 16843344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 34817875 - 34817770
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    ||||||||||||||||||||||||||||| |||||  ||| ||||||| ||| | || | | |||||||||| ||||||||||||||||||||| | |||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctcttc 34817776  T
Q  218 tatttg 223  Q
    ||||||    
T  34817775 tatttg 34817770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 13780837 - 13780730
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    |||||||||||||||| |||||  |||||||| |||||  ||| ||||||| ||  ||||||||||||||| ||| ||||||||||||||||||||| |     
T  13780837 atggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctc 13780738  T
Q  215 ttctattt 222  Q
    ||||||||    
T  13780737 ttctattt 13780730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 18491705 - 18491798
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactt 210  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||  ||| |||| | | |||||||||| ||||||||||||||| ||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatactt 18491798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 33229303 - 33229396
Alignment:
Q  119 aaaatgttacatgaacacccttt-attcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||| |||||||||||||||| |||| ||||||  ||| ||||||| ||||||||||||||||||||||||||||||  |||| ||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatcatacaatcacacttt 33229396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 8896681 - 8896577
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||||||||||||||||||| |||    ||| ||||||||||  | |||| |||||||||||| |||||||||||| |||||||| | ||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaatcacactttcttttct 8896582  T
Q  219 atttg 223  Q
    |||||    
T  8896581 atttg 8896577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 42849949 - 42849853
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    ||||||||||||||||||||||||||||||||             ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  42849949 tatggaaaatgttacatgaacaccctttattc------------ctacaccccatgtattagggatattttgataagttcatctcacaaccacactttat 42849862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 966939 - 966840
Alignment:
Q  112 attatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||| | |  ||||||||| |||||||||||| || |||||    
T  966939 attaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatacttt 966840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 34895841 - 34895745
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    ||||| ||||||||||||||| |||| ||| ||||| |||| ||||||| ||| |||||||| || ||||||| |||||||||||| || |||||||    
T  34895841 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttat 34895745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 6518566 - 6518484
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaa 202  Q
    ||||||||||||||||||| |||| ||||||||  |||| ||||||| ||| |||||||| |||||||||| ||||||||||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 14285676 - 14285758
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctca 199  Q
    ||||||| |||||  ||||||||||| ||||||||| |||| |||||||||| |||||  ||||||||||||| |||||||||    
T  14285676 ggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctca 14285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 39149350 - 39149286
Alignment:
Q  159 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctatttg 223  Q
    |||| |||||||||||| |||||||||||||||||||| |||||| ||||||||| || ||||||    
T  39149350 tacatcctatgtattagagatattttggtaagttcatcccacaactacactttatcttttatttg 39149286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 4299518 - 4299435
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaa 202  Q
    ||||||||| |||||||||||||| ||||||||| |||| ||||| | ||| ||||  || |||||||||| ||||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaa 4299435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 4452023 - 4451956
Alignment:
Q  144 tcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||| | |||| |||||| |||| ||||||||||||||||||| ||||||||||||||| |||||    
T  4452023 tcatacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatacttt 4451956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 42026767 - 42026875
Alignment:
Q  117 ggaaaatgttacatgaacaccc--tttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||  ||||||||||||    ||| |||| ||   | |||||||||||||||| || ||||||||||||| ||||||| |     
T  42026767 ggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaactacactttctt 42026866  T
Q  215 ttctatttg 223  Q
    |||||||||    
T  42026867 ttctatttg 42026875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 7070413 - 7070449
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttattcataca 150  Q
    |||| ||||||||||||||||||||||||||||||||    
T  7070413 tatgaaaaatgttacatgaacaccctttattcataca 7070449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 42849964 - 42849994
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttatt 144  Q
    |||||||||||||||||||||||||||||||    
T  42849964 tatggaaaatgttacatgaacaccctttatt 42849994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 145
Target Start/End: Complemental strand, 36169022 - 36168990
Alignment:
Q  113 ttatggaaaatgttacatgaacaccctttattc 145  Q
    |||||||||||||||||| ||||||||||||||    
T  36169022 ttatggaaaatgttacataaacaccctttattc 36168990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 43571187 - 43571080
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    |||||||||||||||||||||||||||||| ||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43571187 tggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 43571088  T
Q  216 tctatttg 223  Q
    ||||||||    
T  43571087 tctatttg 43571080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 5489776 - 5489882
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| |||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5489875  T
Q  217 ctatttg 223  Q
    |||||||    
T  5489876 ctatttg 5489882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 23989624 - 23989517
Alignment:
Q  117 ggaaaatgttacatgaacacccttt-attcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    ||||||||||||||||||||||||| ||||||||||   ||| || |||||||||||||||||||||||||||| || |||||||||||||||||||| |    
T  23989624 ggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatct 23989525  T
Q  216 tctatttg 223  Q
    ||||||||    
T  23989524 tctatttg 23989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 48499062 - 48498956
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||||||||| |||||||  |||||   ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  48499062 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 48498963  T
Q  217 ctatttg 223  Q
    |||||||    
T  48498962 ctatttg 48498956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 37814778 - 37814883
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| ||||||||||||||||||| |  ||| ||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||| ||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T
Q  217 ctattt 222  Q
    ||||||    
T  37814878 ctattt 37814883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 48119626 - 48119722
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  48119626 atggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatacttt 48119722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 44112677 - 44112771
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||||||| |||||||||| ||||||||||||||| |||||    
T  44112677 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatacttt 44112771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 38335916 - 38336012
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||| || ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  38335916 atggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatacttt 38336012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 35003293 - 35003388
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||  |||| |||||||||||||| ||||||||||||||| |||||    
T  35003293 tggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatacttt 35003388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 24769599 - 24769493
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||| |||||||||| ||||||  |||||   ||| ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| ||    
T  24769599 ggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttcttatcacaaccacactttatctt 24769500  T
Q  217 ctatttg 223  Q
    |||||||    
T  24769499 ctatttg 24769493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 222
Target Start/End: Complemental strand, 50448361 - 50448255
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    ||||||||||||||||||||| |||||||  |||||   ||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||| |    
T  50448361 tggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatcttacaaccacattttatct 50448262  T
Q  216 tctattt 222  Q
    |||||||    
T  50448261 tctattt 50448255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 4401329 - 4401434
Alignment:
Q  119 aaaatgttacatgaacacccttt-attcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    |||||| ||||||||||| |||| |||| |||||   ||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatcttc 4401428  T
Q  218 tatttg 223  Q
    ||||||    
T  4401429 tatttg 4401434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 7447828 - 7447931
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||| ||||||||| |||| |  ||| ||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||| ||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtacaccc-atgtattacagatattttgataagttcatctcacaaccacactttatcttct 7447926  T
Q  219 atttg 223  Q
    |||||    
T  7447927 atttg 7447931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 2497660 - 2497557
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| |||||| ||||||||||||    ||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||  |||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacactttatcatct 2497561  T
Q  219 attt 222  Q
    ||||    
T  2497560 attt 2497557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 750405 - 750299
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||| |||||||||||  ||| ||||||  ||| ||||||| |||||| |||||||||||| ||| ||||||||| ||||||||||||| ||    
T  750405 ggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatctt 750306  T
Q  217 ctatttg 223  Q
    |||||||    
T  750305 ctatttg 750299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 41065153 - 41065247
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||| | || ||||||| ||| |||||||  |||||||||| ||||||||||||||| |||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatacttt 41065247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 46168383 - 46168477
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||| | | |||| ||||||| ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatacttt 46168477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 45427845 - 45427751
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||| ||| |||| ||||||||| |||| ||||| | ||| |||||||| |||||||||| ||||||||||||||| |||||    
T  45427845 ggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatacttt 45427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 38113295 - 38113202
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactt 210  Q
    ||||||||||| |||||||||||||| ||||||||| |||| ||||||| ||| ||||  || |||||||||| ||||||||||||||| ||||    
T  38113295 ggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatactt 38113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 4888093 - 4888149
Alignment:
Q  167 atgtattagggatattttggtaagttcatctcacaaccacactttatattctatttg 223  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  4888093 atgtattagggatattttggtaagtttatctcacaaccacactttattttctatttg 4888149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 45639832 - 45639738
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||| ||||| ||||||| | |||| ||||||| ||  |||| |||||||||||||| |||||||||||| || |||||    
T  45639832 ggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatacttt 45639738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 35000218 - 35000119
Alignment:
Q  112 attatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| |||| ||||||||  |||| || ||   |||||||||||| |||||| ||| || |||||||||||| |||||    
T  35000218 attatggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatacttt 35000119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 26585462 - 26585556
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||| |||||||  ||||| |||||||| ||||| ||||||| ||| |||| ||||||||| |||| |||||||| ||| || |||||    
T  26585462 ggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatacttt 26585556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 45705825 - 45705919
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||| |||||||||||||| |||||||   |||| ||||| | ||| |||| ||| |||||| ||| ||||||||||||||| |||||    
T  45705825 ggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatacttt 45705919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 14427347 - 14427394
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacacc 164  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacc 14427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 685 - 791
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 784  T
Q  217 ctatttg 223  Q
    |||||||    
T  785 ctatttg 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 33703141 - 33703247
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  |||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33703141 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 33703240  T
Q  217 ctatttg 223  Q
    |||||||    
T  33703241 ctatttg 33703247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 48492539 - 48492639
Alignment:
Q  16 ttaattctaaaaattctgttttttgacaaaattgtataagttctatttttagaaagtaaaattgacacnnnnnnngttaaagttcatgttgtttagatta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||||||||    
T  48492539 ttaattctaaaaattctgttttttgacaaaattgtataagttctatttttagaaagtaaaattgacacaaaaaaagttaaagttgatgttgtttagatta 48492638  T
Q  116 t 116  Q
    |    
T  48492639 t 48492639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 23035980 - 23036085
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||  ||||||||| |||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||    
T  23035980 ggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatctt 23036079  T
Q  217 ctattt 222  Q
    ||||||    
T  23036080 ctattt 23036085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 25051693 - 25051798
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||| |||||||||| |||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatctt 25051792  T
Q  217 ctattt 222  Q
    ||||||    
T  25051793 ctattt 25051798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 27864564 - 27864669
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| |||||| |||||||||||| |  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  27864564 ggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatttt 27864663  T
Q  217 ctattt 222  Q
    ||||||    
T  27864664 ctattt 27864669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 27316816 - 27316708
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    |||||||||||||| | ||||||||||||||| ||||||  ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  27316816 tatggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttat 27316717  T
Q  214 attctattt 222  Q
     ||||||||    
T  27316716 cttctattt 27316708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 28982927 - 28982816
Alignment:
Q  112 attatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||| ||||||||||||||||||||||||||||  |||||| |||| |||| || || ||||||||||||||||||||||||||||||||||| ||||||    
T  28982927 attaaggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaaccgcacttt 28982828  T
Q  212 atattctatttg 223  Q
    || |||||||||    
T  28982827 atcttctatttg 28982816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 1771366 - 1771261
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||| ||||| ||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaaccacattttatctt 1771267  T
Q  217 ctattt 222  Q
    ||||||    
T  1771266 ctattt 1771261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 35017730 - 35017838
Alignment:
Q  114 tatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    |||||||||||||||||||||||||||||||| || | |  ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  35017730 tatggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgtat-agggatattttggtaagttcatctcacaaccacactttat 35017828  T
Q  214 attctatttg 223  Q
     |||||||||    
T  35017829 cttctatttg 35017838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 55966446 - 55966341
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| ||||||||||||||||||| |  ||| |||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  55966446 ggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacaatttatctt 55966347  T
Q  217 ctattt 222  Q
    ||||||    
T  55966346 ctattt 55966341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 27893940 - 27893837
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||||| |||||| |||||||||||| |  ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttct 27893841  T
Q  219 attt 222  Q
    ||||    
T  27893840 attt 27893837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 27550309 - 27550414
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  |||||   ||| ||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatctt 27550408  T
Q  217 ctattt 222  Q
    ||||||    
T  27550409 ctattt 27550414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 43949900 - 43949795
Alignment:
Q  119 aaaatgttacatgaacacccttt-attcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    |||||| |||||||||||||||| |||| | ||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 43949801  T
Q  218 tatttg 223  Q
    ||||||    
T  43949800 tatttg 43949795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 711960 - 712054
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||| |||||||||||| || |||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatacttt 712054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 17619256 - 17619158
Alignment:
Q  113 ttatggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||| ||||||| ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  17619256 ttatggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatacttt 17619158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 23204875 - 23204773
Alignment:
Q  120 aaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattcta 219  Q
    ||||||||||||||||| |||||||| |||| |  ||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatcttcta 23204776  T
Q  220 ttt 222  Q
    |||    
T  23204775 ttt 23204773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 39631102 - 39631207
Alignment:
Q  119 aaaatgttacatgaacacccttt-attcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    |||||| ||||||||| |||||| |||| ||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 39631201  T
Q  218 tatttg 223  Q
    ||||||    
T  39631202 tatttg 39631207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 41878407 - 41878512
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    ||||||||||||||||||| |||||||||||||||  ||| ||||||||||  ||||||||||||||| ||||||||||||||||||| || || | |||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctcttc 41878506  T
Q  218 tatttg 223  Q
    ||||||    
T  41878507 tatttg 41878512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 48463550 - 48463445
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    |||||||||||||| |||||| ||||||||||||    ||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  48463550 ggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatttt 48463451  T
Q  217 ctattt 222  Q
    ||||||    
T  48463450 ctattt 48463445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 43514784 - 43514680
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||||||||||||||||||||||||| |||||   ||| |||||   ||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaaccacaccttatcttct 43514685  T
Q  219 atttg 223  Q
    |||||    
T  43514684 atttg 43514680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 12496955 - 12497062
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    |||||||||||| ||||||||||||||||| |||||   ||| |||| || ||||||||| ||||||||||||||||||||| |||| |||||||||| |    
T  12496955 tggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatct 12497054  T
Q  216 tctatttg 223  Q
    ||||||||    
T  12497055 tctatttg 12497062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 28988473 - 28988579
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||||||||||  ||| ||||||| ||| | |||||| |||||| ||| ||||||||| ||||||||||| | ||    
T  28988473 ggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T
Q  217 ctatttg 223  Q
    |||||||    
T  28988573 ctatttg 28988579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 45490415 - 45490307
Alignment:
Q  115 atggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttata 214  Q
    ||||||||||||||||||||||  |||||| ||||| |  ||| ||||||  |||||||||||||| ||| |||| |||||||||||||||||||||||     
T  45490415 atggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatc 45490316  T
Q  215 ttctatttg 223  Q
    |||||||||    
T  45490315 ttctatttg 45490307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 31680904 - 31681007
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    |||||||||| | |||||| ||||||||||||    ||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatcttct 31681003  T
Q  219 attt 222  Q
    ||||    
T  31681004 attt 31681007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 55272477 - 55272382
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||| |||||| ||||||||  |||| ||||||| ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  55272477 tggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatacttt 55272382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 21687006 - 21687112
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||| ||||||||  ||||||  |||||||| | ||||||||||  ||||||| |||||||||||||| ||||| ||||||| ||    
T  21687006 ggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctcataaccatactttatctt 21687105  T
Q  217 ctatttg 223  Q
    |||||||    
T  21687106 ctatttg 21687112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 43735744 - 43735848
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattct 218  Q
    ||||| ||||||||||| ||||||||| |||| |  ||||||||  | ||||||||| ||||||||| |||||||||||||||| |||||||||| ||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcacaatcacactttatcttct 43735843  T
Q  219 atttg 223  Q
    |||||    
T  43735844 atttg 43735848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 960970 - 960890
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatct 197  Q
    |||||||||||||||||||||||||| ||||||||  |||| ||||||||||  |||||||| |||||||||| |||||||    
T  960970 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 3756344 - 3756252
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||| ||| |||| ||||||||| |||| || ||||||||| || |||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt 3756252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 32728357 - 32728451
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||||||| |||||| ||||||||| |||| ||||||| ||| |||| ||| ||||| |||| |||||||||||| || |||||    
T  32728357 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatacttt 32728451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 35037007 - 35037093
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaacca 205  Q
    |||||||||||||| |||||||||  |||||||  |||| ||||||| ||| |||| |||||||||||||| |||||||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaacca 35037093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 48435679 - 48435583
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 213  Q
    ||||| ||||||||||||||| |||| ||| ||||| |||| ||||||| ||| |||||||| || ||||||| |||||||||||| || |||||||    
T  48435679 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttat 48435583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 41847971 - 41848077
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||| ||||| ||||| |||| |||||  ||| ||||||| ||| ||||| || ||||||| || |||||| |||||||||||||| | ||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T
Q  217 ctatttg 223  Q
    |||||||    
T  41848071 ctatttg 41848077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 41327641 - 41327549
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||  |||||||||||||| |||||  ||| |||||| |||| | || ||| |||||||||| ||||||||||| |||||||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacacttt 41327549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 46412516 - 46412464
Alignment:
Q  170 tattagggatattttggtaagttcatctcacaaccacactttatattctattt 222  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  46412516 tattagagatattttggtaagttcttctcacaaccacactttatcttctattt 46412464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 51512323 - 51512259
Alignment:
Q  159 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattctatttg 223  Q
    ||||||| ||||||||| ||||||||||||||||||||| | ||||||||||||| || ||||||    
T  51512323 tacaccccatgtattagagatattttggtaagttcatcttataaccacactttatcttttatttg 51512259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 46827806 - 46827721
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaa 202  Q
    |||||||||||||||||||||||||| ||||||||  |||| ||||||| ||| |||| | |  ||||||||| || |||||||||    
T  46827806 ggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaa 46827721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 38851515 - 38851607
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||| | |||||| ||||||| |||| | ||||| | ||| |||| ||| |||||| ||| ||||||||||||||| |||||    
T  38851515 aaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatacttt 38851607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 36004209 - 36004169
Alignment:
Q  112 attatggaaaatgttacatgaacaccctttattcatacacc 152  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  36004209 attatggaaaatgttacatgaataccctttaatcatacacc 36004169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 49229764 - 49229684
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatct 197  Q
    ||||||||||| ||||||| |||||| ||||||||| |||| |||||   ||| |||| ||||||| |||||| |||||||    
T  49229764 ggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 56215956 - 56215903
Alignment:
Q  158 atacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||| |||||| ||||| |||||||||| || || ||||||||||||||||||    
T  56215956 atacatcctatgcattagcgatattttggaaaatttatctcacaaccacacttt 56215903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 112656 - 112761
Alignment:
Q  118 gaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatattc 217  Q
    |||||||||||||||||||||||||||| ||||    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 112755  T
Q  218 tatttg 223  Q
    ||||||    
T  112756 tatttg 112761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 14288 - 14182
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  ||||||  ||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 14189  T
Q  217 ctatttg 223  Q
    |||||||    
T  14188 ctatttg 14182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 24616 - 24510
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||||||||||||||||||||||  ||||||  ||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 24517  T
Q  217 ctatttg 223  Q
    |||||||    
T  24516 ctatttg 24510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 11251 - 11355
Alignment:
Q  117 ggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatatt 216  Q
    ||||||||| |||||||||| |||||||||||||||  ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||    
T  11251 ggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatctt 11350  T
Q  217 ctatt 221  Q
    |||||    
T  11351 ctatt 11355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 45817 - 45725
Alignment:
Q  119 aaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    |||||||||||||||||||||||| ||||||||| |||| |||| ||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatacttt 45725  T

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Target: scaffold0157 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 23522 - 23415
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatat 215  Q
    |||||||||||| ||||||||||||||||| |||||   ||| |||| || ||||||||| ||||||||||||||||||||| |||| |||||||||| |    
T  23522 tggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatct 23423  T
Q  216 tctatttg 223  Q
    ||||||||    
T  23422 tctatttg 23415  T

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Target: scaffold0100 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 35557 - 35462
Alignment:
Q  116 tggaaaatgttacatgaacaccctttattcatacaccatattatacaccctatgtattagggatattttggtaagttcatctcacaaccacacttt 211  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||||||| ||| |||||||| || ||||||| ||||||||||||||| |||||    
T  35557 tggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatacttt 35462  T

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