View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9826_high_39 (Length: 206)
Name: NF9826_high_39
Description: NF9826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9826_high_39 |
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Alignment Details
Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 21 - 192
Target Start/End: Complemental strand, 43469919 - 43469756
Alignment:
| Q |
21 |
ttaggtacacctgtctctctcccattccattggaagcctccttttaaagtgtgtattgtggtccccaccttctaatcttattgatttatccattaataca |
120 |
Q |
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| T |
43469919 |
ttaggtacacctgtctctctcccattccattggaagcctccttttaaagtgtgtattgtggtccccaccttctaatcttattgatttatccattaataca |
43469820 |
T |
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| Q |
121 |
tattactactataggt-acaccttaattatataaatgttctctcttggtctatcattttgcaatacccctttg |
192 |
Q |
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| T |
43469819 |
tattac-----taggtaacacc----ttatataaatgttctctcttggtctatcattttgcaatacccctttg |
43469756 |
T |
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