View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9826_low_15 (Length: 382)

Name: NF9826_low_15
Description: NF9826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9826_low_15
NF9826_low_15
[»] chr1 (18 HSPs)
chr1 (92-382)||(51453870-51454143)
chr1 (8-89)||(44112679-44112760)
chr1 (8-89)||(45427762-45427843)
chr1 (8-89)||(41065155-41065236)
chr1 (8-89)||(48119630-48119711)
chr1 (8-89)||(35000130-35000211)
chr1 (8-89)||(35003296-35003377)
chr1 (8-89)||(38113212-38113293)
chr1 (8-89)||(38335920-38336001)
chr1 (8-89)||(45705827-45705908)
chr1 (34-89)||(14427349-14427404)
chr1 (8-89)||(45639749-45639830)
chr1 (8-89)||(46168385-46168466)
chr1 (10-89)||(26585464-26585543)
chr1 (8-89)||(43571103-43571184)
chr1 (8-89)||(48498979-48499060)
chr1 (8-91)||(2497579-2497662)
chr1 (8-89)||(5489778-5489859)
[»] chr8 (18 HSPs)
chr8 (8-89)||(34304790-34304871)
chr8 (8-89)||(35181518-35181599)
chr8 (8-91)||(33630010-33630093)
chr8 (8-89)||(18066735-18066816)
chr8 (8-92)||(30912579-30912663)
chr8 (8-91)||(29800967-29801050)
chr8 (8-89)||(16603643-16603724)
chr8 (8-89)||(42197452-42197533)
chr8 (8-91)||(20148760-20148843)
chr8 (8-91)||(42295195-42295278)
chr8 (8-91)||(26125635-26125718)
chr8 (8-91)||(42699257-42699340)
chr8 (8-89)||(1375544-1375625)
chr8 (8-89)||(2546998-2547079)
chr8 (8-89)||(11582768-11582849)
chr8 (8-89)||(29705364-29705445)
chr8 (8-89)||(36743500-36743581)
chr8 (9-89)||(2165981-2166061)
[»] chr2 (19 HSPs)
chr2 (8-92)||(11825671-11825755)
chr2 (8-89)||(43114559-43114640)
chr2 (8-100)||(41281991-41282083)
chr2 (8-91)||(6518486-6518568)
chr2 (8-89)||(12415477-12415558)
chr2 (8-89)||(12427537-12427618)
chr2 (8-89)||(16803970-16804051)
chr2 (8-89)||(16843252-16843333)
chr2 (8-89)||(18491707-18491788)
chr2 (8-85)||(34895758-34895835)
chr2 (8-91)||(4299437-4299520)
chr2 (8-89)||(966851-966932)
chr2 (8-89)||(43335780-43335861)
chr2 (9-91)||(43490419-43490501)
chr2 (8-89)||(1750416-1750497)
chr2 (8-89)||(4764743-4764824)
chr2 (8-89)||(19047159-19047240)
chr2 (8-89)||(30838634-30838715)
chr2 (8-89)||(34817793-34817874)
[»] chr3 (17 HSPs)
chr3 (8-89)||(9434126-9434207)
chr3 (8-89)||(34791831-34791912)
chr3 (8-89)||(51757595-51757676)
chr3 (8-89)||(4190282-4190363)
chr3 (8-89)||(10457909-10457990)
chr3 (8-89)||(52627994-52628075)
chr3 (8-89)||(25996270-25996351)
chr3 (8-89)||(40808867-40808948)
chr3 (8-92)||(27748562-27748646)
chr3 (8-89)||(25413683-25413764)
chr3 (8-89)||(42100690-42100771)
chr3 (8-89)||(45126945-45127026)
chr3 (8-89)||(24688419-24688500)
chr3 (8-89)||(42394436-42394517)
chr3 (8-89)||(46941055-46941136)
chr3 (8-89)||(53273701-53273782)
chr3 (8-89)||(54237098-54237179)
[»] chr7 (18 HSPs)
chr7 (8-89)||(40236921-40237002)
chr7 (8-89)||(33384872-33384954)
chr7 (8-89)||(27535248-27535329)
chr7 (8-91)||(43343641-43343724)
chr7 (8-91)||(44416951-44417034)
chr7 (8-89)||(31408650-31408731)
chr7 (8-89)||(31513289-31513370)
chr7 (8-91)||(4638216-4638299)
chr7 (8-91)||(10573749-10573832)
chr7 (8-91)||(44326178-44326261)
chr7 (8-89)||(5015397-5015478)
chr7 (11-88)||(26898422-26898499)
chr7 (8-89)||(35069723-35069804)
chr7 (8-89)||(9216304-9216384)
chr7 (8-89)||(24001029-24001110)
chr7 (24-89)||(39998410-39998475)
chr7 (8-89)||(42538448-42538529)
chr7 (8-89)||(43317445-43317526)
[»] chr6 (13 HSPs)
chr6 (8-89)||(33253915-33253996)
chr6 (8-89)||(33242405-33242486)
chr6 (8-91)||(24204004-24204087)
chr6 (8-91)||(27441542-27441625)
chr6 (8-89)||(7367551-7367632)
chr6 (8-89)||(13743238-13743319)
chr6 (8-89)||(13748738-13748819)
chr6 (8-89)||(26670026-26670107)
chr6 (8-91)||(30735982-30736065)
chr6 (8-89)||(7273352-7273433)
chr6 (8-89)||(7292749-7292830)
chr6 (8-89)||(9698350-9698431)
chr6 (8-89)||(26466801-26466882)
[»] chr5 (11 HSPs)
chr5 (8-89)||(32473411-32473492)
chr5 (8-89)||(17208076-17208157)
chr5 (8-91)||(5256995-5257078)
chr5 (8-89)||(7617135-7617216)
chr5 (8-89)||(22512307-22512388)
chr5 (8-89)||(30622736-30622816)
chr5 (8-89)||(33801471-33801552)
chr5 (19-89)||(33855071-33855141)
chr5 (8-89)||(2614666-2614747)
chr5 (8-89)||(18033984-18034065)
chr5 (8-89)||(41334680-41334761)
[»] chr4 (23 HSPs)
chr4 (8-89)||(32728359-32728440)
chr4 (8-89)||(55272393-55272474)
chr4 (8-89)||(17619169-17619250)
chr4 (8-85)||(48435596-48435673)
chr4 (11-89)||(960890-960968)
chr4 (11-89)||(49229684-49229762)
chr4 (8-89)||(711962-712043)
chr4 (8-91)||(3756263-3756346)
chr4 (8-91)||(27893859-27893942)
chr4 (8-91)||(35037005-35037088)
chr4 (8-91)||(38851513-38851596)
chr4 (8-91)||(43514703-43514786)
chr4 (8-89)||(27864566-27864647)
chr4 (8-89)||(46827723-46827804)
chr4 (9-89)||(28988475-28988555)
chr4 (11-89)||(27550311-27550389)
chr4 (8-91)||(41327560-41327643)
chr4 (8-89)||(1771283-1771364)
chr4 (8-89)||(23035982-23036063)
chr4 (8-89)||(28982839-28982920)
chr4 (8-89)||(33703143-33703224)
chr4 (8-89)||(48463467-48463548)
chr4 (8-89)||(55966363-55966444)
[»] scaffold0100 (1 HSPs)
scaffold0100 (8-89)||(35473-35554)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-91)||(45736-45819)
[»] scaffold0119 (1 HSPs)
scaffold0119 (8-89)||(687-768)
[»] scaffold0038 (1 HSPs)
scaffold0038 (8-89)||(112657-112738)


Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 92 - 382
Target Start/End: Original strand, 51453870 - 51454143
Alignment:
Q  92 cggaaaaaaccttaatgagcaagttatgacttattgctattttagaatcggctttatggaccccactccttacactataccacgctgatgcgatgcctaa 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||                ||||||||||||||    
T  51453870 cggaaaaaaccttaatgagcaagttatgacttattgctattttagaatcggttttatggaccc-actcct----------------gatgcgatgcctaa 51453952  T
Q  192 tacaagtaacaaacattctcaacgttcaggtttctccacctcgccattttcagcagtagcagtagaagtaaacaaacccaaatgcaatgcatgctccata 291  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51453953 tacaagtaacaaacattctcaacgttcagttttctccacctcgccattttcagcagtagcagtagaagtaaacaaacccaaatgcaatgcatgctccata 51454052  T
Q  292 gctagggttccttcacctcgccattttcatcctctattctatgttaaactaattaatcaaatccctgaaaaacaaaaactccattctctgc 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51454053 gctagggttccttcacctcgccattttcatcctctattctatgttaaactaattaatcaaatccctgaaaaacaaaaactccattctctgc 51454143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 44112760 - 44112679
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  44112760 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 44112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 45427762 - 45427843
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| | | |||||||||||||||    
T  45427762 gtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacatttt 45427843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 41065236 - 41065155
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||||||||||| ||||||||||||  |||||||| || ||||||||||||| | |||||||||||||||||    
T  41065236 gtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacatttt 41065155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 48119711 - 48119630
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| |||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  48119711 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 48119630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 35000130 - 35000211
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| || ||| ||||||||||||||| ||||| || |||||||| ||||||||||||| | |||||||||||||||||    
T  35000130 gtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacatttt 35000211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 35003377 - 35003296
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| ||||| |||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  35003377 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 35003296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 38113212 - 38113293
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||||||  |||||||||  ||||||||||| ||||||||||||| | ||||||| |||||||||    
T  38113212 gtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacatttt 38113293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 38336001 - 38335920
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| |||||||||   |||||||||  ||||||||||||| | |||||||||||||||||    
T  38336001 gtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacatttt 38335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 45705908 - 45705827
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||| |||||||||| |||||||||  |||||||||||  |||||||||||| | ||||||| |||||||||    
T  45705908 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacatttt 45705827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 14427404 - 14427349
Alignment:
Q  34 taatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 14427349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 45639749 - 45639830
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| ||||| |||  |||||||||||  ||||||||||||   |||||||||||||||||    
T  45639749 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacatttt 45639830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 46168466 - 46168385
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| ||||||||   |||||||||||  | |||||||||| | |||||||||||||||||    
T  46168466 gtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacatttt 46168385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 26585543 - 26585464
Alignment:
Q  10 gagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||| |||| ||||| ||| |||||||||  ||||||||||  |||||||||||||  |||||||| |||||||||    
T  26585543 gagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacatttt 26585464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 43571103 - 43571184
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  |||||||||   ||||| || |||| | |||||||||||||||||    
T  43571103 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 43571184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 48498979 - 48499060
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||| ||||||||| | |||||  | ||||   |||||||||||||||||    
T  48498979 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacatttt 48499060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 2497579 - 2497662
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| ||| ||||  |||  ||||||||| |  ||||||| |||||| |||| ||||||||||||||    
T  2497579 gtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttttc 2497662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 5489859 - 5489778
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  5489859 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 5489778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 34304871 - 34304790
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||||||    
T  34304871 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacatttt 34304790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 35181599 - 35181518
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  35181599 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 35181518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 33630010 - 33630093
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    ||||||||||||||| ||||||||||||||||||   |||||||||   ||||||||||||| | ||||| |||||||||||||    
T  33630010 gtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttttc 33630093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 18066735 - 18066816
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||||||||||| ||||| |||||||| ||||   ||||||||||  |||||||||||| | |||||||||||||||||    
T  18066735 gtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacatttt 18066816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 30912579 - 30912663
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttcc 92  Q
    |||||||||| ||||||||||  ||||||| ||||| ||||||||| | ||||| || |||| | ||||||||||||||||||||    
T  30912579 gtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttttcc 30912663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 29800967 - 29801050
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||| |  ||||||| |||||| |||| ||||||||||||||    
T  29800967 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc 29801050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 16603643 - 16603724
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||||||  |||||||||  ||||| ||||  ||||||||||||| | ||| |||||||||||||    
T  16603643 gtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacatttt 16603724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 42197452 - 42197533
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||  ||||| |||| | ||||| || |||||| |||||||||||||||||    
T  42197452 gtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacatttt 42197533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20148843 - 20148760
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| ||||||||  |||| ||||||||| |  ||||||| |||| | |||| ||||||||||||||    
T  20148843 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttc 20148760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 42295278 - 42295195
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| |||||||| ||||  |||||||||   ||||| || |||| | |||||||||||||||||||    
T  42295278 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttttc 42295195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 26125718 - 26125635
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  ||||||| |||| | |||| ||||||||||||||    
T  26125718 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttttc 26125635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 42699340 - 42699257
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||| ||||| ||| |||| ||| | ||||||||| | ||||| || |||| | |||||||||||||||||||    
T  42699340 gtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttttc 42699257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 1375625 - 1375544
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| || |||||||||| ||||||||  |||  ||||||||| | |||||||| |||| | ||||||||||| |||||    
T  1375625 gtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaatttt 1375544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 2547079 - 2546998
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||| ||||| |||||||| ||||| ||||||||| | |||||  | ||||   |||||||||||||||||    
T  2547079 gtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacatttt 2546998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 11582849 - 11582768
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  11582849 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 11582768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 29705445 - 29705364
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||| |||||| |||||||| ||||  ||||||||| | |||||  | |||| | |||||||||||||||||    
T  29705445 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacatttt 29705364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 36743500 - 36743581
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  36743500 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 36743581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 2165981 - 2166061
Alignment:
Q  9 tgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||||| |||||||||| || ||||| ||||  || |||||| | ||||| || |||||| ||||||||||| |||||    
T  2165981 tgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatatttt 2166061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 11825671 - 11825755
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttcc 92  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  11825671 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttttcc 11825755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 43114640 - 43114559
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  43114640 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 43114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 41281991 - 41282083
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttccggaaaaaa 100  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||||  |||||||    
T  41281991 gtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttttcaagaaaaaa 41282083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 6518486 - 6518568
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||||    
T  6518486 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttttc 6518568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 12415477 - 12415558
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||  ||||||||||||| | |||||||||||||||||    
T  12415477 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacatttt 12415558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 12427537 - 12427618
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||  ||||||||||||| | |||||||||||||||||    
T  12427537 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacatttt 12427618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 16804051 - 16803970
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||||| | |||||||||||||||||    
T  16804051 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 16803970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 16843333 - 16843252
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||||| | |||||||||||||||||    
T  16843333 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 16843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 18491788 - 18491707
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||||| | |||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||    
T  18491788 gtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 18491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 34895758 - 34895835
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaaca 85  Q
    |||||||||| ||||||| ||||||||||||||||  ||||||||||| |||| |||||||||| |||||||||||||    
T  34895758 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaaca 34895835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 4299437 - 4299520
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||||||  |||||||||  ||||||||||| ||||||||||||| | ||||||| |||||||||||    
T  4299437 gtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttttc 4299520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 966851 - 966932
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||||||||| || | |||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  966851 gtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 966932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 43335780 - 43335861
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||   ||||||||   ||||| || |||||||||||||| |||||||||    
T  43335780 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacatttt 43335861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 43490419 - 43490501
Alignment:
Q  9 tgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    ||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||||    
T  43490419 tgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttttc 43490501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 1750497 - 1750416
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||| ||||| |||||||| |||   ||||||||| | ||||| || |||| | |||||||||||||||||    
T  1750497 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 1750416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 4764743 - 4764824
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |   |||| ||||  ||||||||||| ||||| || |||||| |||| ||||||||||||    
T  4764743 gtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacatttt 4764824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 19047240 - 19047159
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  19047240 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt 19047159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 30838715 - 30838634
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||||   ||||  | |||| | |||||||||||||||||    
T  30838715 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacatttt 30838634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 34817793 - 34817874
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||||| | || ||||||  |||||||||   |||| ||| |||| | |||||||||||||||||    
T  34817793 gtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacatttt 34817874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 9434207 - 9434126
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  9434207 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacatttt 9434126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 34791912 - 34791831
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||||||||||  |||||||||||||||||||| || |||||||  ||||||||||||| | |||||||||||||||||    
T  34791912 gtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacatttt 34791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 51757676 - 51757595
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||| | |||| |||||| |||||    
T  51757676 gtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatatttt 51757595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 4190282 - 4190363
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| || ||||| ||| | ||||||||||| ||||||||||||| | |||||||||||||||||    
T  4190282 gtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 4190363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 10457909 - 10457990
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| || |||||||||| ||| |||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  10457909 gtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacatttt 10457990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 52627994 - 52628075
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| | | |||||||||| |||||||||||  |||||||||||| | |||||| ||||||||||    
T  52627994 gtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacatttt 52628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 25996351 - 25996270
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||||||| ||||  |||  ||||||||||   |||||||||||| | |||||||||||||||||    
T  25996351 gtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacatttt 25996270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 40808948 - 40808867
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||| | ||||| || |||||| |||| ||||||||||||    
T  40808948 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacatttt 40808867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 27748646 - 27748562
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttcc 92  Q
    |||||||||| |||||||||| |||||||| ||| | ||||| |||   |||||||| |||| | ||||||||||||||||||||    
T  27748646 gtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttttcc 27748562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 25413764 - 25413683
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||| ||||| |||||||| ||| | ||||||||| | ||||| || |||| | |||||||||||||||||    
T  25413764 gtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 25413683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 42100771 - 42100690
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  |||||||||   ||||| || |||| | |||||||||||||||||    
T  42100771 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42100690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 45126945 - 45127026
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||| |  ||||||| |||| | |||| ||||||||||||    
T  45126945 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 45127026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 24688419 - 24688500
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| | |||||  | |||| | |||||||||||||||||    
T  24688419 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacatttt 24688500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 42394436 - 42394517
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  42394436 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt 42394517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 46941136 - 46941055
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  |||||||||    |||| || |||| | |||||||||||||||||    
T  46941136 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 46941055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 53273701 - 53273782
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||   ||||||||   || || || |||||||||||||| |||||||||    
T  53273701 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacatttt 53273782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 54237179 - 54237098
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  54237179 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 54237098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 40237002 - 40236921
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||||| | |||||||||||||||||    
T  40237002 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacatttt 40236921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 33384954 - 33384872
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtg-tgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||||||||||||||||||||||||  || |||||||| | ||||||||||||||||||||||||||||||||    
T  33384954 gtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacatttt 33384872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 27535248 - 27535329
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||||||||||||||||||||  |||  ||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  27535248 gtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacatttt 27535329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 43343641 - 43343724
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| ||| |||||| |||||||| ||||  ||||||||||| |||||  | ||||||||||||||||||||||||||    
T  43343641 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttttc 43343724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 44416951 - 44417034
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| ||| |||||| |||||||| ||||  ||||||||||| |||||  | ||||||||||||||||||||||||||    
T  44416951 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttttc 44417034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 31408650 - 31408731
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||| ||||| |||||||||| ||| |||||||||   |||||||||| ||||||||||||| | |||||||||||||||||    
T  31408650 gtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacatttt 31408731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 31513370 - 31513289
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| |||||||||  || |||||||| |||||||||||||   |||||||||||||||||    
T  31513370 gtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacatttt 31513289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 4638216 - 4638299
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| ||| ||||  |||  ||||||||| | |||||||| |||| | |||||||||||||||||||    
T  4638216 gtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttttc 4638299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 10573832 - 10573749
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| | |||||| ||||  |||||||||||  ||||||| |||| | |||| ||||||||||||||    
T  10573832 gtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttttc 10573749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 44326261 - 44326178
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| ||||||||  |||| ||||||||| |  ||||||| |||| | |||| ||||||||||||||    
T  44326261 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttc 44326178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 5015478 - 5015397
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||| ||||||||| | |||||  | ||||   |||||||||||||||||    
T  5015478 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacatttt 5015397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 26898422 - 26898499
Alignment:
Q  11 agatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacattt 88  Q
    ||||||| |||||||||| |||||||| ||||   |||||||| | |||||||| |||| | ||||||||||||||||    
T  26898422 agatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 35069804 - 35069723
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||| |||||||||   ||||| || ||||   |||||||||||||||||    
T  35069804 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacatttt 35069723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 9216384 - 9216304
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| || ||||||||||  |||||||||||  | || || |||| | |||||||||||||||||    
T  9216384 gtgagatgaacttaccaaaatatctctaatgcatgg-gtgtacaataggatataggaataaagggtgttcatgtaacatttt 9216304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 24001029 - 24001110
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  24001029 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 24001110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 39998475 - 39998410
Alignment:
Q  24 aaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||| |||||||| ||||  |||||||||||  ||||||||||||   |||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacatttt 39998410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 42538448 - 42538529
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  42538448 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 42538529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 43317526 - 43317445
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||| |||||| ||||||| ||||    ||||||||   |||||||| |||||| |||||||||||||||||    
T  43317526 gtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacatttt 43317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 33253996 - 33253915
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||||||| ||||||||||||||||  ||||||||||| |||| |||||||||| |||||||||||||||||    
T  33253996 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacatttt 33253915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 33242486 - 33242405
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||||||| |||| ||||  ||||||||||  ||||||||||||||| |||||||||||||||||    
T  33242486 gtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacatttt 33242405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 24204004 - 24204087
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||||| ||||| || |||||| |||||||||||||||||||    
T  24204004 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttttc 24204087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 27441625 - 27441542
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| ||| |||| |||    |||||||||| ||||||||||||| | |||||||||||||||||||    
T  27441625 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttttc 27441542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 7367632 - 7367551
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||   ||||||||   |||||||| |||||||||||||| |||||||||    
T  7367632 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacatttt 7367551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 13743238 - 13743319
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||| |  ||||||| |||| | |||||||||||||||||    
T  13743238 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacatttt 13743319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 13748738 - 13748819
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||| |  ||||||| |||| | |||||||||||||||||    
T  13748738 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacatttt 13748819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 26670026 - 26670107
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||| |||||||||   ||||| || |||| | |||||||||||||||||    
T  26670026 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 26670107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 30736065 - 30735982
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| || ||||| ||||| ||||||||| | ||||| || ||||   |||||||||||||||||||    
T  30736065 gtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttttc 30735982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 7273352 - 7273433
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| || ||||| ||||  ||||||||||  ||||| || |||| | |||||||||||||||||    
T  7273352 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacatttt 7273433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 7292830 - 7292749
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||| |||   |||||||| |||||| ||||| |||||||||||    
T  7292830 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacatttt 7292749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 9698350 - 9698431
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  9698350 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 9698431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 26466882 - 26466801
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||||||||||  ||||||| ||||  ||||||||| | ||||| || |||| | |||| ||||||||||||    
T  26466882 gtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacatttt 26466801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 32473411 - 32473492
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||  ||||||||||||| | |||||||||||||||||    
T  32473411 gtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacatttt 32473492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 17208157 - 17208076
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||||||| |||||||||  ||||||||||  ||||||||||||| | |||||| ||||||||||    
T  17208157 gtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacatttt 17208076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 5257078 - 5256995
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    ||||||||||||||||||||| |||||||| ||||  ||||||||| |  ||||||| |||||| |||| ||||||||||||||    
T  5257078 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc 5256995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 7617216 - 7617135
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||| ||| | |||||||| |||| | |||||||||||||||||    
T  7617216 gtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacatttt 7617135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 22512388 - 22512307
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||| | ||||| || |||| | |||||||||||||||||    
T  22512388 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 22512307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 30622736 - 30622816
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| || |||||||||| ||| |||||||||   | |||||||| ||||||||||||| |||||||||||||||||||    
T  30622736 gtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacatttt 30622816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 33801552 - 33801471
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||| ||||| |||||||| ||||  ||||||||| | |||||  | |||| |||||||||||||||||||    
T  33801552 gtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacatttt 33801471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 33855071 - 33855141
Alignment:
Q  19 ttaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||||| |||||| ||||  ||||||||| | ||||| || |||| | |||||||||||||||||    
T  33855071 ttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 33855141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 2614666 - 2614747
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  2614666 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 2614747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 18034065 - 18033984
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||| ||||| |||||||| |||   ||||||||| | ||||| || |||| | |||||||||||||||||    
T  18034065 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 18033984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 41334680 - 41334761
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||| |||   |||||||| |||| | |||||||||||||||||    
T  41334680 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacatttt 41334761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 32728440 - 32728359
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||| ||||||||| |||||||||  ||||||||||| ||||||||||||| |||||||||||||||||||    
T  32728440 gtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacatttt 32728359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 55272393 - 55272474
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| |||||||||  ||||||||||| ||||||||||||| |||||||||||||||||||    
T  55272393 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacatttt 55272474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 17619169 - 17619250
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| |||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||    
T  17619169 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacatttt 17619250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 48435596 - 48435673
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaaca 85  Q
    |||||||||| ||||||| ||||||||||||||||  ||||||||||| |||| |||||||||| |||||||||||||    
T  48435596 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaaca 48435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 960890 - 960968
Alignment:
Q  11 agatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| |||||||||||||||||||| ||   ||||||||||| ||||||||||||| | |||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacatttt 960968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 49229684 - 49229762
Alignment:
Q  11 agatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| |||||| ||| ||| |||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacatttt 49229762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 712043 - 711962
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||| ||||||||   ||||||||||| ||||||||||||| | |||||||||||||||||    
T  712043 gtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 711962  T

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Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 3756263 - 3756346
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    ||||||| || |||| ||||| ||| |||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||||    
T  3756263 gtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttttc 3756346  T

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Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 27893859 - 27893942
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    ||||||||||||||||||||| |||||||| ||||  ||||||||| |  ||||||| |||||| |||| ||||||||||||||    
T  27893859 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttc 27893942  T

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Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 35037088 - 35037005
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| ||| |||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||||    
T  35037088 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttttc 35037005  T

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Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 38851596 - 38851513
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| ||| |||||||||| |||||||||  ||||||| ||   |||||||||||| ||| |||||||||||||||||    
T  38851596 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaacatttttc 38851513  T

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Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 43514703 - 43514786
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| ||||||||||  ||||||| ||||| ||||||||| | ||||| || |||| | |||||||||||||||||||    
T  43514703 gtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttttc 43514786  T

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Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 27864647 - 27864566
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||| |  ||||||| |||||| |||| ||||||||||||    
T  27864647 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27864566  T

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Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 46827723 - 46827804
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| || ||||||||| || | ||||||||   ||||||||||| ||||||||||||| | |||||||||||||||||    
T  46827723 gtgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacatttt 46827804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 28988555 - 28988475
Alignment:
Q  9 tgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||||| ||| ||||||||||||| ||||||  |||||||||   |||||||| |||| | |||||||||||||||||    
T  28988555 tgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacatttt 28988475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 27550389 - 27550311
Alignment:
Q  11 agatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    ||||||| |||||||||| |||||||| ||||| ||||||||| | |||||  | |||| | |||||||||||||||||    
T  27550389 agatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacatttt 27550311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 41327560 - 41327643
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||||||| || ||||| | ||||||||| | |||| ||| |||| | |||  ||||||||||||||    
T  41327560 gtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttttc 41327643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 1771283 - 1771364
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||| |||||| || ||||| ||||  ||||||||| | ||||| || |||| | |||||||||||||||||    
T  1771283 gtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 1771364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 23036063 - 23035982
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||| ||||| ||||||||  ||   ||||||||||| ||||| || |||| || ||||||||||||||||    
T  23036063 gtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacatttt 23035982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 28982839 - 28982920
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| ||||||||  |||   |||||||||| |||||  | |||| | |||||||||||||||||    
T  28982839 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacatttt 28982920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 33703224 - 33703143
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||  ||||||||||   ||||  | |||| | |||||||||||||||||    
T  33703224 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacatttt 33703143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 48463467 - 48463548
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||   ||||||||    ||||||| |||||| |||| ||||||||||||    
T  48463467 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacatttt 48463548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 55966363 - 55966444
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||   |||||||| |  ||||||| |||| | |||| ||||||||||||    
T  55966363 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 55966444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 35473 - 35554
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| ||||||| ||||||||||||||||  ||||||||||  ||||||||||||||| |||| ||||||||||||    
T  35473 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacatttt 35554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 45736 - 45819
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttttc 91  Q
    |||||||||| |||||||||| ||| |||| |||    |||||||||| ||||||||||||| | |||||||||||||||||||    
T  45736 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttttc 45819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 768 - 687
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| ||||| |||||||||   ||||| || |||| | |||||||||||||||||    
T  768 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 112738 - 112657
Alignment:
Q  8 gtgagatgaaattaccaaaatgtccctaatgcatgatgtgtacaatagtgtgtatgattaaatgatgttcatgtaacatttt 89  Q
    |||||||||| |||||||||| |||||||| |||   ||||||||| |  |||| || |||| | |||||||||||||||||    
T  112738 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacatttt 112657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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