View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9826_low_34 (Length: 256)

Name: NF9826_low_34
Description: NF9826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9826_low_34
NF9826_low_34
[»] chr5 (47 HSPs)
chr5 (1-255)||(8762238-8762493)
chr5 (37-223)||(10085720-10085905)
chr5 (49-227)||(26404097-26404274)
chr5 (55-255)||(26403330-26403530)
chr5 (19-210)||(10084667-10084861)
chr5 (115-255)||(15613528-15613669)
chr5 (90-227)||(1663239-1663377)
chr5 (155-256)||(1273111-1273213)
chr5 (155-256)||(5384338-5384440)
chr5 (114-255)||(15614910-15615053)
chr5 (160-227)||(42510166-42510233)
chr5 (163-255)||(19525288-19525381)
chr5 (160-255)||(5382965-5383061)
chr5 (163-256)||(42979470-42979564)
chr5 (176-255)||(19827153-19827233)
chr5 (155-227)||(22812379-22812451)
chr5 (90-255)||(27893949-27894116)
chr5 (163-255)||(12936102-12936195)
chr5 (155-227)||(15857610-15857682)
chr5 (160-232)||(21387684-21387756)
chr5 (182-255)||(18677999-18678073)
chr5 (162-227)||(12830937-12831002)
chr5 (162-227)||(12862917-12862982)
chr5 (98-227)||(42980645-42980773)
chr5 (113-232)||(15510212-15510332)
chr5 (171-227)||(22819557-22819613)
chr5 (160-227)||(18693750-18693817)
chr5 (162-232)||(15509242-15509312)
chr5 (155-256)||(18695639-18695741)
chr5 (160-210)||(22819514-22819564)
chr5 (155-221)||(32735471-32735537)
chr5 (163-255)||(12933774-12933867)
chr5 (163-255)||(12950260-12950353)
chr5 (163-255)||(19524006-19524098)
chr5 (162-223)||(38473554-38473615)
chr5 (160-255)||(40058041-40058137)
chr5 (193-255)||(326367-326430)
chr5 (155-218)||(21389135-21389198)
chr5 (176-227)||(42511679-42511730)
chr5 (176-214)||(2167527-2167565)
chr5 (115-177)||(5062138-5062200)
chr5 (160-218)||(32734192-32734250)
chr5 (162-255)||(38471312-38471406)
chr5 (155-232)||(224582-224659)
chr5 (89-177)||(5061130-5061218)
chr5 (163-232)||(12947959-12948028)
chr5 (196-255)||(7345423-7345483)
[»] chr4 (56 HSPs)
chr4 (41-255)||(33377243-33377457)
chr4 (51-255)||(55953741-55953945)
chr4 (51-255)||(37559021-37559225)
chr4 (1-225)||(26788576-26788808)
chr4 (90-255)||(1273360-1273525)
chr4 (51-252)||(5688526-5688727)
chr4 (90-255)||(44128261-44128427)
chr4 (51-255)||(37560189-37560392)
chr4 (19-212)||(3217467-3217658)
chr4 (49-213)||(44126664-44126827)
chr4 (100-227)||(5687227-5687353)
chr4 (120-255)||(33376241-33376377)
chr4 (105-255)||(53400208-53400360)
chr4 (160-255)||(35787819-35787915)
chr4 (160-227)||(34439657-34439724)
chr4 (176-256)||(29663665-29663745)
chr4 (155-227)||(38417605-38417677)
chr4 (160-227)||(34438458-34438525)
chr4 (155-255)||(46796018-46796119)
chr4 (101-225)||(15446604-15446732)
chr4 (166-256)||(15787505-15787596)
chr4 (162-255)||(44304978-44305072)
chr4 (160-256)||(86825-86922)
chr4 (160-256)||(11094548-11094645)
chr4 (163-255)||(28103486-28103579)
chr4 (160-256)||(30683024-30683121)
chr4 (157-227)||(50531750-50531820)
chr4 (166-251)||(27410686-27410770)
chr4 (160-255)||(11113765-11113861)
chr4 (160-232)||(11114977-11115049)
chr4 (176-255)||(27408786-27408866)
chr4 (155-255)||(47667202-47667302)
chr4 (160-227)||(17319094-17319161)
chr4 (155-221)||(6139055-6139121)
chr4 (162-255)||(29686279-29686373)
chr4 (160-214)||(38419014-38419068)
chr4 (198-255)||(43894128-43894186)
chr4 (171-255)||(10403302-10403387)
chr4 (163-255)||(21104310-21104403)
chr4 (160-225)||(29833426-29833491)
chr4 (163-255)||(31711115-31711208)
chr4 (163-232)||(52658958-52659027)
chr4 (51-148)||(55952938-55953034)
chr4 (155-255)||(10403409-10403509)
chr4 (155-227)||(40146615-40146687)
chr4 (169-256)||(55952847-55952935)
chr4 (193-255)||(26376352-26376415)
chr4 (176-227)||(26393140-26393191)
chr4 (160-227)||(44302772-44302839)
chr4 (162-232)||(15786999-15787069)
chr4 (155-227)||(3528242-3528314)
chr4 (160-216)||(6140357-6140413)
chr4 (196-255)||(28370674-28370734)
chr4 (160-224)||(38370337-38370401)
chr4 (155-227)||(38553981-38554053)
chr4 (176-232)||(56000334-56000390)
[»] chr3 (50 HSPs)
chr3 (90-251)||(42632733-42632895)
chr3 (51-255)||(41387322-41387526)
chr3 (37-255)||(13077826-13078044)
chr3 (37-255)||(51825496-51825714)
chr3 (89-255)||(41386153-41386320)
chr3 (51-233)||(2124075-2124256)
chr3 (51-255)||(10987541-10987746)
chr3 (90-255)||(42633813-42633979)
chr3 (37-255)||(54653840-54654059)
chr3 (49-255)||(47807993-47808199)
chr3 (43-255)||(43101917-43102129)
chr3 (37-232)||(43103171-43103365)
chr3 (90-255)||(47806841-47807006)
chr3 (114-255)||(47855287-47855431)
chr3 (160-255)||(8371243-8371339)
chr3 (51-227)||(36626783-36626970)
chr3 (98-255)||(29536737-29536894)
chr3 (163-255)||(19253002-19253095)
chr3 (155-255)||(32980444-32980545)
chr3 (160-255)||(26798903-26798999)
chr3 (155-255)||(47766943-47767043)
chr3 (160-255)||(53808341-53808437)
chr3 (162-255)||(25583137-25583231)
chr3 (155-256)||(25585825-25585927)
chr3 (183-255)||(51401371-51401444)
chr3 (90-223)||(51824182-51824315)
chr3 (161-255)||(11219453-11219548)
chr3 (155-225)||(29537134-29537204)
chr3 (155-255)||(7820413-7820514)
chr3 (163-232)||(11220658-11220727)
chr3 (160-255)||(19622028-19622124)
chr3 (81-160)||(10986750-10986828)
chr3 (115-201)||(47854565-47854651)
chr3 (160-218)||(23559880-23559938)
chr3 (106-227)||(48866193-48866315)
chr3 (170-232)||(54752663-54752725)
chr3 (195-255)||(8372648-8372709)
chr3 (176-256)||(10986674-10986755)
chr3 (155-232)||(48252980-48253057)
chr3 (155-227)||(43345371-43345443)
chr3 (202-255)||(39133040-39133094)
chr3 (162-232)||(48035323-48035393)
chr3 (163-255)||(49122002-49122095)
chr3 (155-255)||(49334329-49334430)
chr3 (163-255)||(51400238-51400331)
chr3 (160-255)||(17350099-17350195)
chr3 (160-232)||(32973186-32973258)
chr3 (57-144)||(36627923-36628009)
chr3 (166-227)||(12060710-12060771)
chr3 (160-232)||(53049034-53049106)
[»] chr7 (56 HSPs)
chr7 (51-255)||(22061684-22061888)
chr7 (37-214)||(35128067-35128242)
chr7 (42-252)||(35127836-35128046)
chr7 (51-255)||(19279501-19279705)
chr7 (49-255)||(43007536-43007742)
chr7 (51-255)||(22746209-22746413)
chr7 (105-255)||(46673513-46673663)
chr7 (89-255)||(46674860-46675027)
chr7 (90-255)||(22060486-22060652)
chr7 (101-255)||(22744769-22744924)
chr7 (90-255)||(7146803-7146968)
chr7 (49-223)||(48672662-48672835)
chr7 (37-255)||(19278376-19278595)
chr7 (105-255)||(43006408-43006559)
chr7 (90-255)||(7147985-7148151)
chr7 (89-256)||(48671100-48671267)
chr7 (124-223)||(36702911-36703010)
chr7 (160-255)||(4857224-4857320)
chr7 (115-256)||(47163175-47163316)
chr7 (89-225)||(48754050-48754186)
chr7 (101-225)||(7347156-7347282)
chr7 (163-253)||(46458713-46458804)
chr7 (155-256)||(14206695-14206797)
chr7 (155-256)||(14215385-14215487)
chr7 (98-255)||(43936075-43936233)
chr7 (154-232)||(4858335-4858413)
chr7 (115-255)||(33458333-33458474)
chr7 (155-255)||(13446650-13446751)
chr7 (155-255)||(43935208-43935309)
chr7 (162-255)||(40926518-40926612)
chr7 (167-256)||(40930440-40930530)
chr7 (162-255)||(43930342-43930436)
chr7 (176-255)||(46457093-46457173)
chr7 (160-227)||(27899211-27899278)
chr7 (162-256)||(38406040-38406135)
chr7 (182-255)||(25153681-25153755)
chr7 (155-256)||(28326382-28326483)
chr7 (163-232)||(24873597-24873666)
chr7 (148-255)||(36702800-36702909)
chr7 (180-255)||(33459560-33459636)
chr7 (154-255)||(14107855-14107957)
chr7 (154-255)||(14417812-14417914)
chr7 (160-214)||(35315219-35315273)
chr7 (155-256)||(43931858-43931960)
chr7 (180-256)||(1970835-1970912)
chr7 (160-255)||(14109068-14109162)
chr7 (160-255)||(14419025-14419119)
chr7 (196-255)||(19848867-19848927)
chr7 (157-227)||(10257382-10257450)
chr7 (160-227)||(13286991-13287058)
chr7 (114-232)||(36673786-36673905)
chr7 (193-256)||(41515019-41515082)
chr7 (163-255)||(25154936-25155029)
chr7 (155-255)||(45721758-45721859)
chr7 (196-232)||(18801262-18801298)
chr7 (160-232)||(30223973-30224045)
[»] chr1 (42 HSPs)
chr1 (51-255)||(25785991-25786195)
chr1 (90-255)||(25787091-25787257)
chr1 (51-255)||(47411337-47411541)
chr1 (90-255)||(16217463-16217629)
chr1 (51-255)||(47136576-47136780)
chr1 (43-256)||(16218359-16218572)
chr1 (51-255)||(47411007-47411210)
chr1 (56-255)||(52181199-52181398)
chr1 (37-255)||(3979186-3979406)
chr1 (51-227)||(3978096-3978271)
chr1 (105-255)||(42248247-42248398)
chr1 (162-255)||(13641280-13641374)
chr1 (161-255)||(26056145-26056240)
chr1 (163-255)||(13930675-13930768)
chr1 (160-255)||(21277017-21277113)
chr1 (163-256)||(14071203-14071297)
chr1 (120-227)||(14390310-14390418)
chr1 (160-227)||(36511328-36511395)
chr1 (160-227)||(51726841-51726908)
chr1 (176-227)||(14169671-14169722)
chr1 (160-227)||(19466202-19466269)
chr1 (160-227)||(36509863-36509930)
chr1 (161-227)||(20953340-20953406)
chr1 (183-255)||(13929318-13929391)
chr1 (155-255)||(49139824-49139925)
chr1 (156-227)||(14765087-14765158)
chr1 (160-227)||(40811247-40811314)
chr1 (106-227)||(2971751-2971873)
chr1 (88-255)||(48467284-48467439)
chr1 (155-255)||(26054920-26055021)
chr1 (155-255)||(50679813-50679914)
chr1 (90-221)||(35684129-35684261)
chr1 (106-232)||(48935052-48935179)
chr1 (160-214)||(22167844-22167898)
chr1 (160-225)||(19464654-19464719)
chr1 (160-256)||(49141493-49141590)
chr1 (176-232)||(9592285-9592341)
chr1 (160-255)||(9633798-9633894)
chr1 (162-232)||(35683102-35683172)
chr1 (176-225)||(14171281-14171330)
chr1 (160-255)||(2237975-2238071)
chr1 (160-232)||(52742973-52743045)
[»] chr8 (52 HSPs)
chr8 (43-255)||(31623929-31624141)
chr8 (51-255)||(43275773-43275977)
chr8 (105-255)||(31625326-31625477)
chr8 (51-256)||(41867804-41868010)
chr8 (51-251)||(38589847-38590047)
chr8 (51-255)||(27750510-27750714)
chr8 (88-255)||(38590938-38591100)
chr8 (81-232)||(43277840-43277990)
chr8 (90-255)||(1570133-1570299)
chr8 (51-232)||(3237464-3237644)
chr8 (91-255)||(4807389-4807554)
chr8 (126-255)||(41866917-41867047)
chr8 (160-256)||(36070200-36070297)
chr8 (104-255)||(45385735-45385887)
chr8 (155-255)||(37274910-37275011)
chr8 (160-255)||(35943930-35944027)
chr8 (160-256)||(7486099-7486196)
chr8 (155-255)||(24068353-24068454)
chr8 (160-255)||(16363809-16363905)
chr8 (160-227)||(13367047-13367114)
chr8 (160-256)||(37276240-37276337)
chr8 (160-255)||(117071-117167)
chr8 (164-255)||(24069447-24069539)
chr8 (160-255)||(36756087-36756183)
chr8 (193-256)||(37323370-37323434)
chr8 (164-255)||(4810125-4810216)
chr8 (163-256)||(29739643-29739737)
chr8 (162-255)||(36940032-36940126)
chr8 (170-255)||(37472426-37472512)
chr8 (160-233)||(39546674-39546747)
chr8 (160-255)||(19913515-19913611)
chr8 (115-186)||(14820673-14820744)
chr8 (193-255)||(43386732-43386795)
chr8 (178-255)||(14820216-14820294)
chr8 (162-255)||(37324687-37324781)
chr8 (163-255)||(19914906-19914999)
chr8 (171-255)||(35945445-35945530)
chr8 (160-255)||(44606162-44606258)
chr8 (160-227)||(8095398-8095465)
chr8 (182-255)||(39515222-39515296)
chr8 (163-227)||(29738343-29738407)
chr8 (185-255)||(36734566-36734637)
chr8 (164-227)||(41522689-41522752)
chr8 (168-214)||(2421298-2421344)
chr8 (160-210)||(8395064-8395114)
chr8 (162-255)||(10053743-10053837)
chr8 (193-227)||(34616181-34616215)
chr8 (164-217)||(8096546-8096599)
chr8 (203-255)||(21267187-21267240)
chr8 (203-255)||(37474076-37474129)
chr8 (160-232)||(38032-38104)
chr8 (162-210)||(36938750-36938798)
[»] scaffold2127 (1 HSPs)
scaffold2127 (51-255)||(404-608)
[»] chr6 (15 HSPs)
chr6 (115-255)||(8412268-8412409)
chr6 (101-255)||(8411109-8411264)
chr6 (162-255)||(22299902-22299996)
chr6 (163-255)||(31740272-31740365)
chr6 (160-255)||(31738386-31738482)
chr6 (170-255)||(5311302-5311388)
chr6 (162-223)||(27440174-27440235)
chr6 (162-255)||(33807712-33807806)
chr6 (162-255)||(27438813-27438907)
chr6 (160-255)||(33802014-33802110)
chr6 (98-255)||(19368452-19368611)
chr6 (162-227)||(14328773-14328838)
chr6 (162-227)||(14421783-14421848)
chr6 (163-225)||(293640-293702)
chr6 (177-255)||(34084148-34084225)
[»] chr2 (39 HSPs)
chr2 (37-255)||(42027216-42027434)
chr2 (146-255)||(2581826-2581936)
chr2 (91-232)||(15650488-15650629)
chr2 (125-254)||(42028920-42029050)
chr2 (160-256)||(23177695-23177793)
chr2 (160-256)||(23588952-23589050)
chr2 (98-255)||(1624911-1625068)
chr2 (155-255)||(6706949-6707050)
chr2 (152-255)||(2583535-2583639)
chr2 (160-255)||(4829488-4829584)
chr2 (161-232)||(12852933-12853004)
chr2 (126-227)||(34039315-34039416)
chr2 (114-232)||(2305587-2305706)
chr2 (90-255)||(6208992-6209157)
chr2 (98-227)||(41312552-41312682)
chr2 (160-225)||(7490192-7490257)
chr2 (162-227)||(14509261-14509326)
chr2 (162-227)||(14510508-14510573)
chr2 (161-255)||(35799535-35799630)
chr2 (155-214)||(40174756-40174815)
chr2 (163-255)||(7036989-7037082)
chr2 (163-255)||(10367262-10367355)
chr2 (163-255)||(12959705-12959798)
chr2 (155-255)||(23178874-23178975)
chr2 (155-255)||(23590131-23590232)
chr2 (163-255)||(37869040-37869133)
chr2 (196-255)||(12958439-12958499)
chr2 (160-232)||(21012077-21012149)
chr2 (196-255)||(37867779-37867839)
chr2 (149-225)||(42246645-42246721)
chr2 (193-255)||(12854134-12854197)
chr2 (163-214)||(32614450-32614501)
chr2 (198-255)||(7038367-7038425)
chr2 (183-256)||(10368405-10368479)
chr2 (202-255)||(22653066-22653120)
chr2 (162-255)||(28109868-28109962)
chr2 (162-227)||(35801044-35801109)
chr2 (155-227)||(3533618-3533690)
chr2 (160-232)||(29424609-29424681)
[»] scaffold0007 (1 HSPs)
scaffold0007 (89-256)||(145797-145963)
[»] scaffold0178 (1 HSPs)
scaffold0178 (101-255)||(2202-2358)
[»] scaffold0051 (2 HSPs)
scaffold0051 (162-255)||(22151-22244)
scaffold0051 (193-255)||(39931-39994)
[»] scaffold0003 (2 HSPs)
scaffold0003 (162-223)||(47126-47187)
scaffold0003 (162-255)||(48455-48549)
[»] scaffold1974 (1 HSPs)
scaffold1974 (160-232)||(625-697)
[»] scaffold1878 (1 HSPs)
scaffold1878 (160-232)||(577-649)
[»] scaffold0290 (2 HSPs)
scaffold0290 (160-232)||(9475-9547)
scaffold0290 (155-255)||(8402-8503)
[»] scaffold0122 (1 HSPs)
scaffold0122 (160-205)||(16019-16064)
[»] scaffold0098 (1 HSPs)
scaffold0098 (155-214)||(42338-42397)
[»] scaffold0046 (1 HSPs)
scaffold0046 (193-255)||(23429-23492)
[»] scaffold0177 (1 HSPs)
scaffold0177 (106-225)||(1809-1928)
[»] scaffold0084 (1 HSPs)
scaffold0084 (193-255)||(13234-13297)
[»] scaffold0045 (1 HSPs)
scaffold0045 (162-255)||(77180-77274)
[»] scaffold0025 (2 HSPs)
scaffold0025 (181-225)||(56718-56762)
scaffold0025 (154-225)||(54645-54716)
[»] scaffold0013 (1 HSPs)
scaffold0013 (176-255)||(96183-96263)


Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 8762238 - 8762493
Alignment:
Q  1 agaggagatagttgtggattttatttttggtagtgaaataataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattct 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||     
T  8762238 agaggagatagttgtggattttttttttggtagtgaaataataataataattattatatgttgtgcgtccagggtttgtaatgtgtgcttttttaaatcc 8762337  T
Q  101 aaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagattta 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  8762338 aactgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatattaacggagaggactaaaatagtaaacgacataaaattta 8762437  T
Q  201 tgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    || |||||||||||||||||||||||||| ||||||| ||||||||  ||||||||    
T  8762438 tgtgaccaaattgagacattttatagtcatgggaccaaattgaaaattaaaaataa 8762493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 223
Target Start/End: Original strand, 10085720 - 10085905
Alignment:
Q  37 aataataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaa 136  Q
    |||||||||||||||||||||||||||||  | || ||| |||   |||| |||||| ||| | ||  ||||||| |||||||||| |||||||||||||    
T  10085720 aataataataataattatcatatgttgtgaattcacggtatgtcgcgtgtgctttttaaatcc-aattgttgatcatcaatcttaactgacacgtggaaa 10085818  T
Q  137 agagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacatttta 223  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||||| ||| ||||    
T  10085819 agagttaacagattttgcaaaatactaacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacacttta 10085905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 49 - 227
Target Start/End: Original strand, 26404097 - 26404274
Alignment:
Q  49 aattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacaga 148  Q
    ||||||||| |||| || ||||| ||| ||  ||||||| |||||||| || || |||||||| |||||||||||||||||||||||| ||||||| |||    
T  26404097 aattatcatgtgttatgagtccacggtatgccatgtgta-ttttttaaatccaaacgttgatcatcaatcttaaatgacacgtggaaatgagttaataga 26404195  T
Q  149 ttttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||| |||||| |||||| |||||| ||||||||||| | |||||||||||||||| |||||||||||| ||||||||    
T  26404196 ttttgtaaaataataacggtgaggaccaaaatagtaaatgacataagatttatgggatcaaattgagacactttatagt 26404274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 255
Target Start/End: Complemental strand, 26403530 - 26403330
Alignment:
Q  55 catatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgc 154  Q
    ||||||||||  ||||| ||| ||| ||||||  ||||| ||||| |||| |||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  26403530 catatgttgtaagtccacggtatgtcatgtgtgttttttaaattc-aaccattgatcatcaattttaaatgacatgtggaaaagagttaacagattttgc 26403432  T
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaat 253  Q
    || ||| |||| |||| ||| ||||||||||||| ||||| ||||||| || |||||||||||| ||||||| | |||||||| |||||||| |||||||    
T  26403431 aatatattaacagagaagaccaaaatagtaaacgacataaaatttatgagatcaaattgagacactttatagttaagggaccaaattgaaaatcaaaaat 26403332  T
Q  254 aa 255  Q
    ||    
T  26403331 aa 26403330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 10084861 - 10084667
Alignment:
Q  19 ttttatttttggtagtgaaataataataataattatcata---tgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtca 115  Q
    |||| |||| ||||||||||||||||||||||| || |||   || | || ||||| ||| ||  ||| || ||||||||| ||||||||||||||  ||    
T  10084861 tttttttttgggtagtgaaataataataataataataataatgtgctctgagtccacggtatgctatgcgtgcttttttaagtctaaccgttgatcacca 10084762  T
Q  116 atcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaa 210  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||| |||||||    
T  10084761 atcttaactgacacgtgaaaaggagttaacagattttgcaaaatattaacggagaggaccaaaatagtaaacgacaaaagatttatgagaccaaa 10084667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 15613669 - 15613528
Alignment:
Q  115 aatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    |||||||||||||| ||||| ||| | |||||||||||| |||| | ||||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  15613669 aatcttaaatgacatgtggacaagggctaacagattttgaaaaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattga 15613570  T
Q  215 gacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||| ||  ||||| | ||||| ||||||||||    
T  15613569 gacactttatagttagaagaccaaaatgaaatccaaaaataa 15613528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 227
Target Start/End: Complemental strand, 1663377 - 1663239
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatttt-gcaaaatactaacggagaggactaaaatagtaaacg 188  Q
    ||||||| || |||||||||||  | ||||||| | ||||||||||| ||||||||| ||||| |||| ||| ||||||||| ||| |||||||||||||    
T  1663377 tttttaaatccaaccgttgatcaccgatcttaactaacacgtggaaaggagttaacatatttttgcaatatattaacggagaagaccaaaatagtaaacg 1663278  T
Q  189 gcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||| ||||||||| |||||||||| ||||| ||||||||    
T  1663277 gcagaagatttataggaccaaattaagacactttatagt 1663239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 1273213 - 1273111
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaat 253  Q
    |||| |||||||||| |||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||| | | |||||| | ||||||||||||||    
T  1273213 aaaaaactaacggaggggaccaaaattgtaaactgcagaagatttatgggaccaaattgagacattttatagttaaaggaccaaaatgaaaaccaaaaat 1273114  T
Q  254 aaa 256  Q
    |||    
T  1273113 aaa 1273111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 5384338 - 5384440
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||| |||||||| | |||| || |||||||| |||||||    
T  5384338 aaaaaactaacggagaggaccaaaatagtaaacggacgaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaat 5384437  T
Q  254 aaa 256  Q
    |||    
T  5384438 aaa 5384440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 255
Target Start/End: Original strand, 15614910 - 15615053
Alignment:
Q  114 caatcttaaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaatt 212  Q
    ||||||||||||||  ||||| ||| ||||||   ||||| ||| | |||||| |||||||| |||||||||||||||| || |||||||| ||||||||    
T  15614910 caatcttaaatgacttgtggacaagggttaactatttttgaaaataaactaacagagaggaccaaaatagtaaacggcagaaaatttatggaaccaaatt 15615009  T
Q  213 gagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    |||||| |||||||| || |||||| | ||||| ||||||||||    
T  15615010 gagacactttatagttagcggaccaaaatgaaatccaaaaataa 15615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 42510233 - 42510166
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  42510233 actaacggagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagt 42510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 19525288 - 19525381
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||| ||||| |||||||||| |||| ||||| |||||||| |||||| |||||||| | ||||||| ||||||||||||||||||    
T  19525288 aacggagaggaccaaaatggtaaacggcagaagacttatgtgaccaaatggagacactttatagttaggggaccaaattgaaaaccaaaaataa 19525381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 5383061 - 5382965
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||  ||||||||||||| |  |||||||||||||||||||||||||| |||||| | ||| ||||| || |||||||||||||||    
T  5383061 actaacggagaggatcaaaatagtaaacgaccaaagatttatgggaccaaattgagacactttataattaggagaccaaatagaaaaccaaaaataa 5382965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 42979564 - 42979470
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataaa 256  Q
    |||||||||||| |||||||||||||||| |||| |||| |||||||||||| ||| |||||||| || |||||| | ||||| |||||||||||    
T  42979564 aacggagaggaccaaaatagtaaacggcagaagaattattggaccaaattgaaacactttatagttagaggaccaaaatgaaatccaaaaataaa 42979470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 19827153 - 19827233
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||| |||||||| | |||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||||||||||    
T  19827153 aaaatggtaaacggaagaagatttatgggaccaaattgagacactttataattatgggaccaaattgaaaaccaaaaataa 19827233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 22812379 - 22812451
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||| |||||||||| |||| |||||||||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  22812379 aaaaaactaacggaggggaccaaaatagtaaactgcagaagatttatgggatcaaagtgagacattttatagt 22812451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 255
Target Start/End: Original strand, 27893949 - 27894116
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaac-ggagaggactaaaatagtaaacg 188  Q
    ||||||| || || ||||||||   |||||||| ||| ||||||||  ||||||||| |||||||||||||||||| | | |  || |||||||||||||    
T  27893949 tttttaaatccaatcgttgatcaagaatcttaactgatacgtggaattgagttaacaaattttgcaaaatactaacagaaaaaaaccaaaatagtaaacg 27894048  T
Q  189 gcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
     |  || ||||||| ||||||||||| ||| |||||||| | ||||||| | ||||||| ||||||||    
T  27894049 acggaaaatttatgagaccaaattgaaacactttatagttaggggaccaaagtgaaaacaaaaaataa 27894116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 12936102 - 12936195
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||| | ||| ||||| |||||| |||||||| |||| |||||||||||||||| |||||||| | ||||||| | ||||||||||||||||    
T  12936102 aacggaaatgaccaaaatggtaaacagcataagacttattggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataa 12936195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 15857610 - 15857682
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||| ||||||||||| ||| ||||| ||||||| |||||||||||||||| |||||||| ||| ||||||||    
T  15857610 aaaaaactaacggagatgaccaaaatggtaaacgacataagatttatgggaacaaattgaaacactttatagt 15857682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 21387756 - 21387684
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||| || ||||| |||| ||  ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  21387756 actaacagacaggaccaaaagaggtaacggcagaagatttatgggaccaaattgagacattttatagttaggg 21387684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 18678073 - 18677999
Alignment:
Q  182 gtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||| || |||||||||||||||||||||||||| |||||||| | |||| || | ||||||||||||||||    
T  18678073 gtaaacgacagaagatttatgggaccaaattgagacactttatagttaggggatcaaagtgaaaaccaaaaataa 18677999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 12830937 - 12831002
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||| |||||||||||| ||| |||| |||| |||||||||||||||| || |||||    
T  12830937 taacggagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacacttaatagt 12831002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 12862917 - 12862982
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||| |||||||||||| ||| |||| |||| |||||||||||||||| || |||||    
T  12862917 taacggagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacacttaatagt 12862982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 42980645 - 42980773
Alignment:
Q  98 tctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagat 197  Q
    ||||||| ||||||   ||||| |||||||| ||||| |||  ||||| | ||||| |||| | ||||||| ||||| ||||| ||||| |||| |||||    
T  42980645 tctaacccttgatcacaaatctgaaatgacatgtggataaggattaactgtttttgaaaaa-attaacggaaaggaccaaaatggtaaatggcagaagat 42980743  T
Q  198 ttatgggaccaaattgagacattttatagt 227  Q
     |||| ||||||||||||||| ||||||||    
T  42980744 atatgagaccaaattgagacactttatagt 42980773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 15510212 - 15510332
Alignment:
Q  113 tcaatcttaaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaat 211  Q
    |||||||||||||||| ||||| || |||||||   ||||| ||| | |||||| |||||||| |||| ||  ||||||| ||||  || ||||||||||    
T  15510212 tcaatcttaaatgacatgtggacaaaagttaactatttttgaaaacaaactaacagagaggaccaaaagaggtaacggcagaagacataagggaccaaat 15510311  T
Q  212 tgagacattttatagtcaggg 232  Q
    ||||||| |||||||| ||||    
T  15510312 tgagacactttatagttaggg 15510332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 22819557 - 22819613
Alignment:
Q  171 ggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||| || |||||    
T  22819557 ggaccaaaatagtaaacggcagaagagttatgggaccaaattgagacacttaatagt 22819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 18693817 - 18693750
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||| |||||||| |||| ||  |||| || |||||||||||||||| ||||||||||||||||||    
T  18693817 actaacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagt 18693750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 15509312 - 15509242
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||| |||||||  ||||||| ||||  || ||||||||||||||||| |||||||| ||||    
T  15509312 taacggagaggaccaaaataggtaacggcagaagacataagggaccaaattgagacactttatagttaggg 15509242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 18695639 - 18695741
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||| ||| | | ||||||||||   |||| ||||||||||||||||||||| ||||||| | |||||  | | ||||||||||||||    
T  18695639 aaaaaactaacggagatgaccatattagtaaacggatgaagacttatgggaccaaattgagacactttatagttaagggaataaaatgaaaaccaaaaat 18695738  T
Q  254 aaa 256  Q
    |||    
T  18695739 aaa 18695741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 22819514 - 22819564
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaa 210  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||||||    
T  22819514 actaacggagatgaccaaaatagtaaacggcagaagagttatgggaccaaa 22819564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 32735471 - 32735537
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattt 221  Q
    ||||||||||| |||| ||| |||||| ||||||||| |||| ||||||||||||||| | ||||||    
T  32735471 aaaatactaacagagatgaccaaaataataaacggcagaagagttatgggaccaaattaaaacattt 32735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 12933867 - 12933774
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||| |||||  |||| |||||||||| |||| ||||| || |||||||||||| |||||||| | |||| || | ||||||||||||||||    
T  12933867 aacggaaaggaccgaaatggtaaacggcagaagacttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaaccaaaaataa 12933774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 12950260 - 12950353
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||| | ||| ||||| ||||||  ||||||| |||| |||||||||||||||| |||||||| | ||||||| | ||||||||| ||||||    
T  12950260 aacggaaatgaccaaaatggtaaacatcataagacttattggaccaaattgagacactttatagttaggggaccaaaatgaaaaccataaataa 12950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 19524098 - 19524006
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||| | ||| ||||| ||||||| || || |||||| | |||||||||||||| |||||||| | ||||||| ||||||||||||||||||    
T  19524098 aacggacatgaccaaaatggtaaacgacagaaaatttatag-accaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataa 19524006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 38473554 - 38473615
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacatttta 223  Q
    ||||||| | ||| ||||||||||||| || |||||||||||||||||||| ||||| ||||    
T  38473554 taacggaaatgaccaaaatagtaaacgacagaagatttatgggaccaaattaagacacttta 38473615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 40058137 - 40058041
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||| ||| ||||| |||||||||| |||| ||||| |||||| |||| ||| || |||| | ||||| || | ||||||||||||||||    
T  40058137 actaacggagatgaccaaaatggtaaacggcagaagagttatgagaccaatttgaaacacttaatagttaagggatcaaaatgaaaaccaaaaataa 40058041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 326430 - 326367
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||  |||||||||||||| ||||||| | ||||| || ||||||||||||||||||    
T  326430 aagatttatgcaaccaaattgagacactttatagttgagggatcaaattgaaaaccaaaaataa 326367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 21389135 - 21389198
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagaca 218  Q
    |||| ||||||||||||||| | | ||||||||||   |||| |||||||||||||||||||||    
T  21389135 aaaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaaattgagaca 21389198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 42511679 - 42511730
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||| |||||||| ||||||||||| | |||||||||||| ||||||||    
T  42511679 aaaataggaaacggcagaagatttatggaagcaaattgagacactttatagt 42511730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 2167527 - 2167565
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  2167527 aaaataataaacggcagaagatttatgggaccaaattga 2167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 5062138 - 5062200
Alignment:
Q  115 aatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaa 177  Q
    |||| ||||||||| |||||||    |||||||||||||||||| | ||||||||||||||||    
T  5062138 aatcctaaatgacatgtggaaagtgtttaacagattttgcaaaaaattaacggagaggactaa 5062200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 32734250 - 32734192
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagaca 218  Q
    ||||||||| | ||| ||||||||||||| || |||| ||||||||||||||| |||||    
T  32734250 actaacggaaatgaccaaaatagtaaacgacagaagagttatgggaccaaattaagaca 32734192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 38471406 - 38471312
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||| ||||| || |||||||||||||| | ||||||||||| |||||||||| ||| |||| || | |||||||| | |||||  |||||||||    
T  38471406 taacagagagaaccaaaatagtaaacggaagaagatttatggaaccaaattgaaacaatttaaagttaagggaccaaaatgaaattcaaaaataa 38471312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 224582 - 224659
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||| ||||||||||| ||||| | |||||| |||   |||| ||||| ||||||||||||||| |||||||| ||||    
T  224582 aaaaaactaacggagatgactacattagtaatcggaggaagacttatgagaccaaattgagacactttatagttaggg 224659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 5061218 - 5061130
Alignment:
Q  89 ttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagtt-aacagattttgcaaaatactaacggagaggactaa 177  Q
    |||||||| || | || |||||| | |||| ||||||||| ||| ||||| ||| |||||||||||||||| | ||||||||||||||||    
T  5061218 ttttttaaatccagccattgatcataaatcctaaatgacatgtg-aaaagtgtttaacagattttgcaaaaaattaacggagaggactaa 5061130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 12948028 - 12947959
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||| |||||  |||| ||||||| ||||||| ||||| || |||||||||||| |||||||| ||||    
T  12948028 aacggaaaggaccgaaatggtaaacgacataagacttatgagatcaaattgagacactttatagttaggg 12947959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 7345423 - 7345483
Alignment:
Q  196 atttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||||| |||||||| || |||||| | |||||  |||||||||    
T  7345423 atttatgggaccaaattgagacactttatagttagaggaccaaaatgaaattcaaaaataa 7345483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 41 - 255
Target Start/End: Original strand, 33377243 - 33377457
Alignment:
Q  41 ataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagag 140  Q
    ||||||| ||||||||||||||||| ||||| ||| ||  |||||| |||||| ||| | |||||||||||  |||||||||| |||||||||||| |||    
T  33377243 ataataagaattatcatatgttgtgagtccacggtatgccatgtgtgctttttaaatcc-aaccgttgatcaccaatcttaaacgacacgtggaaaggag 33377341  T
Q  141 ttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatat 239  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||||| ||    
T  33377342 ttaacagattttgtaaaatactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaat 33377441  T
Q  240 tgaaaaccaaaaataa 255  Q
    |||||| |||||||||    
T  33377442 tgaaaatcaaaaataa 33377457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 55953741 - 55953945
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| | ||| ||| ||  |||||| |||||| ||||| |||||||||||  ||||||||||||||||||||||| || ||||||||||    
T  55953741 ttatcatatgttgtgagcccacggtatgccatgtgtgctttttaaattc-aaccgttgatcaccaatcttaaatgacacgtggaaatgaattaacagatt 55953839  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    || |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| |||||||| |||    
T  55953840 ttacaaaatactaacggggaggaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttatgggaccaaattgaaaatcaa 55953939  T
Q  250 aaataa 255  Q
    ||||||    
T  55953940 aaataa 55953945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 51 - 255
Target Start/End: Complemental strand, 37559225 - 37559021
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||| ||| ||  |||||| |||||| ||| | |||||||||||  |||| |||| ||||| |||| ||| ||||||||||||    
T  37559225 ttatcatatgttgtgagtccacggtatgccatgtgtgctttttaaatcc-aaccgttgatcaccaattttaagtgacatgtggcaaaaagttaacagatt 37559127  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||||||||||||| ||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  37559126 ttgcaaaatactaacggagatgaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaa 37559027  T
Q  250 aaataa 255  Q
    ||||||    
T  37559026 aaataa 37559021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 26788808 - 26788576
Alignment:
Q  1 agaggagatagttgtggattttatttttggtagtgaaataataataata------------attatcatatgttgtgcgtccagggtttgtaatgtgtac 88  Q
    |||||| |||||||||  |||| ||||||||||||||||||||||||||            |||||||||| ||||| ||||| ||| ||| |||||| |    
T  26788808 agaggaaatagttgtg--ttttttttttggtagtgaaataataataataataattattattattatcatat-ttgtgagtccacggtatgtcatgtgtgc 26788712  T
Q  89 ttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacg 188  Q
    ||||| ||||| |||||||||||  ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  26788711 tttttaaattc-aaccgttgatcaccaatcttaactgacacgtggaaatgagttgacagattttgcaaaatactaacggagaggaccaaaatagtaaacg 26788613  T
Q  189 gcataagatttatgggaccaaattgagacattttata 225  Q
    ||| |||||||||||||| ||||||||| ||||||||    
T  26788612 gcagaagatttatgggacgaaattgagatattttata 26788576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 90 - 255
Target Start/End: Original strand, 1273360 - 1273525
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || |||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||     
T  1273360 tttttaaatccaaccgttgatcaccaatcttaaatgacacgtggaaatgaggtaacagattttgcaaaatactaacggagaggaccaaaatagcaaacga 1273459  T
Q  190 cataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||| ||||||||||||||||||||| |||||||| | ||||||| ||| ||||||||||||||    
T  1273460 cataagacttatgggaccaaattgagacactttatagttaggggaccaaatt-aaaaccaaaaataa 1273525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 51 - 252
Target Start/End: Original strand, 5688526 - 5688727
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| |||||  || ||  |||||| |||| | ||| | ||||||||||| |||||||||| ||||||||||||| ||||||||| |||    
T  5688526 ttatcatatgttgtgagtccacagtatgccatgtgtgctttataaatcc-aaccgttgatcatcaatcttaagtgacacgtggaaatgagttaacaaatt 5688624  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||||||||| |||||||| | ||||||| ||||||||| ||    
T  5688625 ttgcaaaatactaacggagatgaccaaaatagtaaacgacataagatttatggaaccaaattgagacactttatagttaggggaccaaattgaaaactaa 5688724  T
Q  250 aaa 252  Q
    |||    
T  5688725 aaa 5688727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 90 - 255
Target Start/End: Original strand, 44128261 - 44128427
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || |||||||||||  ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44128261 tttttaaatccaaccgttgatcaccaatcttgaatgacatgtggaaatgagttaacagattttgcaaaatactaacggagaggaccaaaatagtaaacgg 44128360  T
Q  190 cataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||  |||| ||||||||||| |||||||| | ||||||| ||||||||  ||||||||    
T  44128361 cataagatttaaaggactaaattgagacactttatagttaggggaccaaattgaaaatgaaaaataa 44128427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 37560189 - 37560392
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    |||||||| |||||| ||||| ||| ||  ||||||  |||||||| || |||| ||||||  |||| |||| ||||| |||| |||||||||||||||     
T  37560189 ttatcatacgttgtgagtccacggtatgccatgtgtg-ttttttaaatccaaccattgatcaccaatattaa-tgacatgtggcaaagagttaacagata 37560286  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||| ||||||||||||| || |||||||||| | ||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  37560287 ttgcaaaatagtaacggagaggaccaagatagtaaacgtcgtaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaa 37560386  T
Q  250 aaataa 255  Q
    ||||||    
T  37560387 aaataa 37560392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 3217467 - 3217658
Alignment:
Q  19 ttttatttttggtagtgaaataataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatc 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || || ||| ||| |  ||| | ||||||| || ||||||||||| |||||     
T  3217467 ttttttttttggtagtgaaataataataataattatcatatgttgtgagttcacggtatgtcacatgtgc-tttttaaatccaaccgttgatcatcaatt 3217565  T
Q  119 ttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaatt 212  Q
    |||| |||||||||| || |||||| ||||||| |||||||||||||||| ||||| ||||||||||||  || |||||||||| || ||||||    
T  3217566 ttaactgacacgtgg-aaggagttaccagatttggcaaaatactaacggataggaccaaaatagtaaacaacagaagatttatgagatcaaatt 3217658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 44126827 - 44126664
Alignment:
Q  49 aattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacaga 148  Q
    ||||||||||||||||| |||||  || |   |||| | |||||| |||| |||| ||||||| |||||||| || |||| ||||||| |||||||||||    
T  44126827 aattatcatatgttgtgagtccacagtatccgatgtatgctttttaaatt-taactgttgatcatcaatcttgaaggacatgtggaaaggagttaacaga 44126729  T
Q  149 ttttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattg 213  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  44126728 ttttgcaaaatactaacagagaagaccaaaatagtaaacggcataagatttaagggaccaaattg 44126664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 5687353 - 5687227
Alignment:
Q  100 taaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagattt 199  Q
    |||| |||||||  |||||||||||||||  || |||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||||| |||||||    
T  5687353 taactgttgatcaccaatcttaaatgacatatg-aaaatagttaacagattttgcaaaataataacggagatgaccaaaatagtaaacggcaaaagattt 5687255  T
Q  200 atgggaccaaattgagacattttatagt 227  Q
    ||||||||||||||||||| ||||||||    
T  5687254 atgggaccaaattgagacactttatagt 5687227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 33376377 - 33376241
Alignment:
Q  120 taaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacat 219  Q
    ||||||||||  ||||| ||| |||| |||||| ||||| | ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||     
T  33376377 taaatgacactaggaaatgagctaacggatttttcaaaaaattaacggagaggactaaaatagtaaacgacagaagatttatgggaccaaattgagacac 33376278  T
Q  220 tttatagtcaggg-accatattgaaaaccaaaaataa 255  Q
    |||||| | |||| || | ||||||||||||||||||    
T  33376277 tttataattagggcactaaattgaaaaccaaaaataa 33376241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 255
Target Start/End: Complemental strand, 53400360 - 53400208
Alignment:
Q  105 gttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaata-ctaacggagaggactaaaatagtaaacggcataagatttatgg 203  Q
    |||||||  ||||| |||| |||| |||| || ||| |||| |||||||||||| | |||||||||||||||||||| ||||||| |||||||||||| |    
T  53400360 gttgatcaccaatcctaaaagacatgtggcaaggagctaacggattttgcaaaaaatctaacggagaggactaaaatggtaaacgacataagatttatag 53400261  T
Q  204 gaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||||||| | ||||||| | ||||| | ||||||||    
T  53400260 gaccaaattgagacactttatagttatgggaccaaaatgaaatctaaaaataa 53400208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 35787915 - 35787819
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| ||||  ||||||| || |||||||||||||||||||||| |||||||||||| || |||||| | ||||||||||||||||    
T  35787915 actaacggagaggaccaaaacggtaaacgacagaagatttatgggaccaaattgaaacattttatagttagaggaccaaagtgaaaaccaaaaataa 35787819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 34439657 - 34439724
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  34439657 actaacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgaaacattttatagt 34439724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 29663745 - 29663665
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaataaa 256  Q
    ||||| |||||||||| |||| ||||||||||||||||||||| |||||||| ||||| || | |||||||||||||||||    
T  29663745 aaaatggtaaacggcagaagagttatgggaccaaattgagacaatttatagttagggatcaaaatgaaaaccaaaaataaa 29663665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 38417677 - 38417605
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||| ||| || |||||    
T  38417677 aaaatactaacggagaggaccgaaatagtaaacgacataagatttatgggaccaaattgacacacttaatagt 38417605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 34438525 - 34438458
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  34438525 actaacagagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagt 34438458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 46796018 - 46796119
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||| | ||||||||||||   |||| ||||||||||||||||||||| |||||||| | ||||||| | | ||||||||||||    
T  46796018 aaaaaactaacggagaggaccacaatagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaat 46796117  T
Q  254 aa 255  Q
    ||    
T  46796118 aa 46796119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 15446604 - 15446732
Alignment:
Q  101 aaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaata----ctaacggagaggactaaaatagtaaacggcataaga 196  Q
    |||| ||||||  ||||||||||||||| ||||| ||| |||| | | ||||| |||| |    |||||||||||||| |||||||||||||| | || |    
T  15446604 aacccttgatcaccaatcttaaatgacatgtggacaagggttagctgtttttgaaaaagaaaaactaacggagaggaccaaaatagtaaacggtagaaaa 15446703  T
Q  197 tttatgggaccaaattgagacattttata 225  Q
    |||||||||||||||||| ||| ||||||    
T  15446704 tttatgggaccaaattgaaacactttata 15446732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 256
Target Start/End: Original strand, 15787505 - 15787596
Alignment:
Q  166 ggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||| ||||| |||||||||| || | ||||||||||||||||||||| |||||||| | ||||||| | ||||||| |||||||||    
T  15787505 ggagaggaccaaaatggtaaacggcaaaaaagttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataaa 15787596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 44304978 - 44305072
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| ||| |||||||||||| ||  ||||||||| |||||||||||||||| ||| |||| | ||||||| ||||||||| ||||||||    
T  44304978 taacggagatgaccaaaatagtaaacagcggaagatttataggaccaaattgagacactttgtagttaggggaccaaattgaaaacaaaaaataa 44305072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 86922 - 86825
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg-accatattgaaaaccaaaaataaa 256  Q
    ||||||||||| ||| |||| ||||||||||| || |||||||||||||||||||||   |||||||| |||| |||| | ||||||| |||||||||    
T  86922 actaacggagaagaccaaaacagtaaacggcagaatatttatgggaccaaattgagatgctttatagttagggaaccaaagtgaaaactaaaaataaa 86825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 11094645 - 11094548
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaataaa 256  Q
    ||||||| ||||||| |||| ||||||||||| || |||||| |||||||||| ||||| |||||||| ||| ||||| | | |||||||||||||||    
T  11094645 actaacgaagaggaccaaaacagtaaacggcagaaaatttataggaccaaattaagacactttatagttaggagaccaaagtaaaaaccaaaaataaa 11094548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 28103486 - 28103579
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||| ||||| ||||| |||||||||| |||  ||||||||||||||||||||| ||||||| | |||||||| | ||||| ||||||||||    
T  28103486 aacggaaaggaccaaaatggtaaacggcagaagtcttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataa 28103579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 30683024 - 30683121
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||| ||| |||| | | ||||||  |||||||||||||||||||||||||| ||||||| | |||||||| | |||||| ||||||||||    
T  30683024 actaacggagaagaccaaaagaattaacggccgaagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaaatcaaaaataaa 30683121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 50531750 - 50531820
Alignment:
Q  157 aatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||| || | ||||||||||||||||| || |||| ||||||||||||||||||||| || |||||    
T  50531750 aatactaacagaaatgactaaaatagtaaacgacaaaagagttatgggaccaaattgagacacttaatagt 50531820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 27410686 - 27410770
Alignment:
Q  166 ggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaa 251  Q
    ||||||||| ||||| |||||||| | ||||||||||| |||||||||||||| |||||||| |||||  | ||||||||| ||||    
T  27410686 ggagaggaccaaaatggtaaacggaagaagatttatgg-accaaattgagacactttatagttagggattaaattgaaaactaaaa 27410770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 11113861 - 11113765
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| | ||| ||||| |||||||||| |||| ||||| ||||||||||||||| ||||||| | |||||| | | |||||||| |||||||    
T  11113861 actaacggaaatgaccaaaatggtaaacggcagaagagttatgagaccaaattgagacactttatagttaagggactaaaatgaaaaccgaaaataa 11113765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 11114977 - 11115049
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||| | ||||| ||||||| || |||| ||||||||||||||||||| | |||||||| ||||    
T  11114977 actaacggagaggtccaaaatggtaaacgacagaagagttatgggaccaaattgagatactttatagttaggg 11115049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 27408866 - 27408786
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||| |||||||| | |||||||||||||||||||||||||| |||||||| ||  ||||| |||||||||  |||||||    
T  27408866 aaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttagatgaccaaattgaaaactgaaaataa 27408786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 47667302 - 47667202
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaata 254  Q
    |||| ||||||| ||||||| | | ||||||||||   |||| ||||| ||||||||||||||| |||||||| || ||||| | | |||||||||||||    
T  47667302 aaaaaactaacgcagaggaccatattagtaaacggaggaagacttatgagaccaaattgagacactttatagttagagaccaaaataaaaaccaaaaata 47667203  T
Q  255 a 255  Q
    |    
T  47667202 a 47667202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 17319161 - 17319094
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||| || ||| ||||||||||||| || ||||||||||| |||||||||| ||| ||||||||    
T  17319161 actaacggtgaagaccaaaatagtaaacgccagaagatttatggaaccaaattgaaacactttatagt 17319094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 6139121 - 6139055
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattt 221  Q
    ||||||||||| |||| ||| |||||| |||||  ||||||| ||||| ||||||||||||||||||    
T  6139121 aaaatactaacagagatgaccaaaataataaacaacataagagttatgagaccaaattgagacattt 6139055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 29686373 - 29686279
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||| |||| ||  |||| |||||||  || |||||||| |||||||| ||||||| | |||||||| | ||||||||||||||||    
T  29686373 taacggagaggaccaaaagaggtaacgacataagacataagggaccaatttgagacaatttatagttaagggaccaaagtgaaaaccaaaaataa 29686279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 38419014 - 38419068
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    ||||||||||| |||||||| ||||||||||| |||| ||||| |||||||||||    
T  38419014 actaacggagatgactaaaacagtaaacggcagaagacttatgagaccaaattga 38419068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 43894186 - 43894128
Alignment:
Q  198 ttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||| |||||||||||||||||||||||| | ||||||| | ||||||||||||||||    
T  43894186 ttatgtgaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataa 43894128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 10403387 - 10403302
Alignment:
Q  171 ggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| ||||||||||||| | ||||||||| | ||||||||| ||||| |||||||| | ||||||| | | ||||||||||||||    
T  10403387 ggaccaaaatagtaaacgacgtaagatttacgagaccaaattaagacactttatagttaggggaccaaagtaaaaaccaaaaataa 10403302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 21104310 - 21104403
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||| ||||| ||||| ||||||| || ||||  |||| ||||||||||||||| |||||||| | ||||||| | ||||||| ||||||||    
T  21104310 aacggaaaggaccaaaatggtaaacgacagaagacatatgagaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataa 21104403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 29833491 - 29833426
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||||||||||||| |||| ||  |||| || ||||| || ||||||||||||||||||||||||    
T  29833491 actaacggagaggaccaaaagaggtaacgacaaaagatataagggaccaaattgagacattttata 29833426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 31711208 - 31711115
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||| ||||  ||||| ||||||| ||||||| ||||| ||||||||||||||| ||||||| | | |||||| | ||||| ||||||||||    
T  31711208 aacggaaaggatcaaaatggtaaacgacataagacttatgagaccaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataa 31711115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 52659027 - 52658958
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||| | ||||||| | |||||||||| ||||||||| | |||||||||| |||||||||||| ||||    
T  52659027 aacggaaatgactaaactggtaaacggcagaagatttatagaaccaaattgaaacattttatagttaggg 52658958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 55953034 - 55952938
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacaga 148  Q
    |||| |||||||||| || || ||| ||| |||||| ||| || ||| |||| |||| |||  ||||||||||||||||||||||| |||||||||||    
T  55953034 ttataatatgttgtgagttcacggtatgtcatgtgtgcttattaaat-ctaatcgtttatcaccaatcttaaatgacacgtggaaatgagttaacaga 55952938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 10403409 - 10403509
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaata 254  Q
    |||||| |||| ||||||||  ||||| |||||| |  |||||||||| ||||||||||| ||| |||||||| ||  | || | |||||||||||||||    
T  10403409 aaaatattaaccgagaggaccgaaataataaacgactgaagatttatgagaccaaattgatacactttatagttagaaatcaaagtgaaaaccaaaaata 10403508  T
Q  255 a 255  Q
    |    
T  10403509 a 10403509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 40146615 - 40146687
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||| ||||||||||| ||| | | |||||| ||| | |||| ||||||||||||||||||||| ||||||||    
T  40146615 aaaaaactaacggagatgaccacattagtaatcggaagaagacttatgggaccaaattgagacactttatagt 40146687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 55952935 - 55952847
Alignment:
Q  169 gaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataaa 256  Q
    |||||| |||||| |||||| ||||||| ||||| ||||||||||| ||| |||||||| | ||||| | ||| |||| ||||||||||    
T  55952935 gaggaccaaaataataaacgacataagagttatgagaccaaattgaaacactttatagttaggggactaaattaaaaatcaaaaataaa 55952847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 26376415 - 26376352
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||||||||||||||| ||||||||| | |||| || | ||||||||||||||||    
T  26376415 aagacttatgggaccaaattgagacgttttatagttaggggatcaaaatgaaaaccaaaaataa 26376352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 26393140 - 26393191
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||| ||||||| || |||| ||||||||||||||||||||| ||||||||    
T  26393140 aaaatggtaaacgacagaagagttatgggaccaaattgagacactttatagt 26393191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 44302839 - 44302772
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||||| |||| ||  || |||| || |||||||||| |||||||||||| ||||||||    
T  44302839 actaacggagaggaccaaaagaggtaatggcagaaaatttatgggatcaaattgagacactttatagt 44302772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 15787069 - 15786999
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||  | |||  ||||||||| || | ||||||||||||||||||||| |||||||| ||||    
T  15787069 taacggagaggatcataatgataaacggcagaaaagttatgggaccaaattgagacagtttatagttaggg 15786999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 3528314 - 3528242
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||| ||||| ||||||||||| | |||||||| |   || | ||||||||||||||||||||| ||||||||    
T  3528314 aaaaaactaatggagaggactacattagtaaacagaggaaaacttatgggaccaaattgagacactttatagt 3528242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 6140357 - 6140413
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgaga 216  Q
    ||||||||| | ||| ||||||||||||| || |||| |||||| ||||||||||||    
T  6140357 actaacggaaatgaccaaaatagtaaacgacagaagagttatggaaccaaattgaga 6140413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 28370674 - 28370734
Alignment:
Q  196 atttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||||||||||||||| |||| ||| || |||||| ||||||| ||||||||||    
T  28370674 atttaggggaccaaattgagacagtttaaagttagaggaccaaattgaaatccaaaaataa 28370734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 38370401 - 38370337
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttat 224  Q
    ||||||||||| ||| ||||| ||||||| || |||| ||||| ||||||||||| ||| |||||    
T  38370401 actaacggagatgaccaaaatggtaaacgacagaagagttatgagaccaaattgatacactttat 38370337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 38554053 - 38553981
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||| ||||| ||||| ||||| | ||||||||||   |||| ||||| ||||||||||||||| ||||||||    
T  38554053 aaaaaactaatggagatgactacattagtaaacggaggaagacttatgagaccaaattgagacactttatagt 38553981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 56000390 - 56000334
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||| |||||||||| |||| |||| |||| ||||||||||| |||||||| ||||    
T  56000390 aaaatggtaaacggcagaagagttataggactaaattgagacactttatagttaggg 56000334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 90 - 251
Target Start/End: Complemental strand, 42632895 - 42632733
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || |||||||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  42632895 tttttaaatccaaccgttgatcaccaatcttaaatgacacgtggcaaagagttaacaaattttgcaaaatactaacggagaggactaaaatagtaaacga 42632796  T
Q  190 cataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaa 251  Q
    |||||||||||||||| |||||||||||| |||||||| | ||||||| ||||||||||||||    
T  42632795 cataagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaa 42632733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 41387322 - 41387526
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||| ||| ||  | |||| |||||| ||| | |||||||||||  |||| |||||||||| |||| ||| ||||||||||||    
T  41387322 ttatcatatgttgtgagtccacggtatgccaagtgtgctttttaaatcc-aaccgttgatcaccaattttaaatgacatgtggcaaaaagttaacagatt 41387420  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  41387421 ttgcaaaatactaacggagaggaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaa 41387520  T
Q  250 aaataa 255  Q
    ||||||    
T  41387521 aaataa 41387526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 37 - 255
Target Start/End: Original strand, 13077826 - 13078044
Alignment:
Q  37 aataataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaa 136  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||||| ||| | |  ||||||||    || |||| |||||||||||||    
T  13077826 aataataatgataattatcatatgttgtgagtccagggtatgtaatgtgtgctttttaaatcc-agtcgttgatcacatatattaactgacacgtggaaa 13077924  T
Q  137 agagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggacc 235  Q
    |||||||| ||||||||||||||| ||||| ||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||| | || |||||    
T  13077925 agagttaatagattttgcaaaatattaacgaagaggtccaaaatagtaaacgacataagatttatgggaccaaattaagacattttatacttagaggacc 13078024  T
Q  236 atattgaaaaccaaaaataa 255  Q
    | |||||||| |||||||||    
T  13078025 aaattgaaaatcaaaaataa 13078044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 37 - 255
Target Start/End: Original strand, 51825496 - 51825714
Alignment:
Q  37 aataataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaa 136  Q
    ||||||||||||||| ||| |||| |||| || ||  || ||| |||||| |||||| ||||| |||| ||||||  ||||||||| |||||||||||||    
T  51825496 aataataataataataatcctatgctgtgagttcacagtatgtcatgtgtgctttttaaattc-aaccattgatcaccaatcttaactgacacgtggaaa 51825594  T
Q  137 agagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggacc 235  Q
    |||||||||||||||||||||||||||||||| | ||| ||||||||||||| || |||||||||||||||||||||| ||| ||||||| | |||||||    
T  51825595 agagttaacagattttgcaaaatactaacggatatgaccaaaatagtaaacgacagaagatttatgggaccaaattgaaacactttatagttaagggacc 51825694  T
Q  236 atattgaaaaccaaaaataa 255  Q
    | | ||||| ||||||||||    
T  51825695 aaagtgaaatccaaaaataa 51825714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 89 - 255
Target Start/End: Complemental strand, 41386320 - 41386153
Alignment:
Q  89 ttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacg 188  Q
    |||||||| || ||||||||||   |||| |||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  41386320 ttttttaaatccaaccgttgattaccaatattaaatgacatgtggcaaagagttaacagatattgcaaaatagtaacggagaggaccaaaatagtaaacg 41386221  T
Q  189 gcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
     | |||||||||||| |||||||||||||| |||||||| | ||||||| ||||||||||||||||||    
T  41386220 tcgtaagatttatggaaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataa 41386153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 233
Target Start/End: Complemental strand, 2124256 - 2124075
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    |||||||||||||||  |||| | | ||| |||||| |||||| ||| | |||||||||||   |||||||||||||| |||  || |||||||||||||    
T  2124256 ttatcatatgttgtgaatccacgatatgtcatgtgtgctttttaaatcc-aaccgttgatcactaatcttaaatgacatgtgacaaggagttaacagatt 2124158  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggga 233  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  2124157 ttgcaaaatactaacggagatgaccaaaatagtaaacggcataagatttatgggaccaaattaagatattttatagttaggga 2124075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 10987541 - 10987746
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||| ||||||||| |||||  || ||  |||||| ||||||||| || |||||||||||   |||||||| ||||| |||||||  ||||||||||||    
T  10987541 ttatcctatgttgtgagtccactgtatgccatgtgtgcttttttaaatccaaccgttgatcactaatcttaactgacatgtggaaagaagttaacagatt 10987640  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||| |||| |||||||| ||||||  ||||||||||| ||||||||||||||||||||||| |||||||| | ||||||| | ||||||||||    
T  10987641 ttgcaaaatattaacagagaggaccaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaa 10987740  T
Q  250 aaataa 255  Q
    ||||||    
T  10987741 aaataa 10987746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 90 - 255
Target Start/End: Original strand, 42633813 - 42633979
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || ||||||||||   ||||||||||||||| |||| |||||||||||| ||||||| |||||||||| |||||||| |||||| ||||||     
T  42633813 tttttaaatccaaccgttgattaccaatcttaaatgacatgtggcaaagagttaacaaattttgccaaatactaacagagaggaccaaaataataaacga 42633912  T
Q  190 cataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||||||||||| | |||||| | ||||||| |||||||| |||||||||    
T  42633913 cataagatttatgggaccaaattgagacactctatagttaggggaccaaattgaaaatcaaaaataa 42633979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 255
Target Start/End: Original strand, 54653840 - 54654059
Alignment:
Q  37 aataataataataattatcatatgtt-gtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaa 135  Q
    ||||||||||||||| || ||||||| ||| |||||  || ||  |||||| |||||| ||| | |||||||||||   |||||||| ||||| ||||||    
T  54653840 aataataataataataataatatgtttgtgagtccacagtatggcatgtgttctttttaaatcc-aaccgttgatcaagaatcttaactgacatgtggaa 54653938  T
Q  136 aagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggac 234  Q
    | || ||||||||||||||||||| |||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||| ||||||| | ||||||    
T  54653939 atgaattaacagattttgcaaaatcctaacggagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagttaagggac 54654038  T
Q  235 catattgaaaaccaaaaataa 255  Q
    || | ||||| ||||||||||    
T  54654039 caaaatgaaatccaaaaataa 54654059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 47807993 - 47808199
Alignment:
Q  49 aattatcatatgttgtgcgtccagggtttgtaa-tgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacag 147  Q
    ||||||||||||||||| ||||| ||| ||| | ||||| |||||| ||| | |||||||||||  | ||||||| ||||||||||||||||||||||||    
T  47807993 aattatcatatgttgtgagtccacggtatgtcagtgtgtgctttttaaatcc-aaccgttgatcaccgatcttaactgacacgtggaaaagagttaacag 47808091  T
Q  148 attttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaac 246  Q
     |||||||| ||| ||||||||||||| ||||||| ||||| || |||||||||| ||||||||||||||| ||||||| | ||| |||| | ||||| |    
T  47808092 -ttttgcaatatattaacggagaggaccaaaatagcaaacgacagaagatttatgagaccaaattgagacactttatagttaaggaaccaaagtgaaatc 47808190  T
Q  247 caaaaataa 255  Q
    |||||||||    
T  47808191 caaaaataa 47808199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 43 - 255
Target Start/End: Complemental strand, 43102129 - 43101917
Alignment:
Q  43 aataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagtt 142  Q
    ||||| ||||||| ||||||||| ||||| ||| ||  |||||| |||||| |||| || |||||||||   || ||||| || |||||||||| |||||    
T  43102129 aataaaaattatcgtatgttgtgagtccacggtatgctatgtgtgctttttaaatt-tatccgttgatcaagaaccttaactggcacgtggaaaggagtt 43102031  T
Q  143 aacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattg 241  Q
    |||| |||||||||||||| |||||||| ||  |||||||||| || || |||| ||||||||||||||||||||| |||||| | || |||||| | ||    
T  43102030 aacatattttgcaaaatacaaacggagatgatcaaaatagtaagcgacagaagaattatgggaccaaattgagacactttataattagaggaccaaaatg 43101931  T
Q  242 aaaaccaaaaataa 255  Q
    ||||||||||||||    
T  43101930 aaaaccaaaaataa 43101917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 232
Target Start/End: Original strand, 43103171 - 43103365
Alignment:
Q  37 aataataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaa 136  Q
    ||||| ||||| ||| ||||||||||| | |||||   | ||| |||||| |||||| ||| | |||||| ||||   |||||||| ||||| |||||||    
T  43103171 aataagaataagaatgatcatatgttgggagtccacaatatgttatgtgtgctttttaaatcc-aaccgtcgatcaagaatcttaactgacatgtggaaa 43103269  T
Q  137 agagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
     ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| || |||||||  |||||||||||| ||||| |||| ||||    
T  43103270 ggagttaacaaattttgcaaaatactaacggaaaggaccaaaatagtaaacggcagaaaatttatgaaaccaaattgagatattttgtagttaggg 43103365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 255
Target Start/End: Complemental strand, 47807006 - 47806841
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || |||| ||||||  | ||||||| ||||||||| ||| ||||||| ||||||||||| ||||||||||||||||| ||||| |||||| |    
T  47807006 tttttaaatccaaccattgatcaccgatcttaactgacacgtgaaaaggagttaatagattttgcaagatactaacggagaggaccaaaat-gtaaacag 47806908  T
Q  190 cataagatttatgggaccaaattgagacattttat-agtcagggaccatattgaaaaccaaaaataa 255  Q
    || ||||||||| ||| |||||||||||| ||||| | | |||||||| | ||||| ||||||||||    
T  47806907 cagaagatttataggatcaaattgagacactttataattaagggaccaaaatgaaatccaaaaataa 47806841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 255
Target Start/End: Original strand, 47855287 - 47855431
Alignment:
Q  114 caatcttaaatgacacgtggaaaagagttaacagattttgcaaaatac--taacggagaggactaaaatagtaaacggcataagatttatgggaccaaat 211  Q
    ||||||||||||||| ||||| ||| |||||| | ||||| |||| |   ||||||||||||| |||||||||||||||| ||||||||| |||||||||    
T  47855287 caatcttaaatgacatgtggacaagggttaactgtttttgaaaaaaaaaataacggagaggaccaaaatagtaaacggcagaagatttataggaccaaat 47855386  T
Q  212 tgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||| ||||||| | | |||||| | ||||| ||||||||||    
T  47855387 tgagacactttatagttaacggaccaaaatgaaatccaaaaataa 47855431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 8371339 - 8371243
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| | ||||||| | ||||||| ||||||||    
T  8371339 actaacggagaggaccaaaatagtaaactgcagaagatttatggaaccaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaataa 8371243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 227
Target Start/End: Complemental strand, 36626970 - 36626783
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||| ||| ||  || ||| |||||| ||||| ||||||| |||   |||||||||||||| ||||||||||| ||||| |||    
T  36626970 ttatcatatgttgtgagtccacggtatgctatctgtgctttttaaattc-aaccgttcatcaataatcttaaatgacatgtggaaaagaggtaacaaatt 36626872  T
Q  151 ttgcaaaatactaacgg------------agaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||||||||            ||||||| |||| |||||||| ||||||||||| ||||||||||||| ||| || |||||    
T  36626871 ttgcaaaatactaacggaaatactaacgaagaggaccaaaacagtaaacgacataagatttaagggaccaaattgaaacacttcatagt 36626783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 255
Target Start/End: Complemental strand, 29536894 - 29536737
Alignment:
Q  98 tctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagat 197  Q
    ||||||| ||||||   |||||||||||||| |||||  |  || ||||| ||||| ||||  |||||||||||||| |||||||||||||  | |||||    
T  29536894 tctaacccttgatcacaaatcttaaatgacatgtggaccatggtaaacagtttttgaaaaag-ctaacggagaggaccaaaatagtaaacgaaagaagat 29536796  T
Q  198 ttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||| |||||||| || ||| || | ||||| ||||||||||    
T  29536795 ttatgggaccaaattgagacactttatagttagaggatcaaaatgaaatccaaaaataa 29536737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 19253002 - 19253095
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||| ||||| ||||| |||||||||| || |||||||||| ||||||||||||||||||| | | ||||||| ||||||||||||||||||    
T  19253002 aacggacaggaccaaaatggtaaacggcagaatatttatgggatcaaattgagacattttataattaggggaccaaattgaaaaccaaaaataa 19253095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 32980444 - 32980545
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| ||| |||| | ||||||| |||||||||  |||||    
T  32980444 aaaaaactaacggagatgaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttgtagttaggggaccaaattgaaaacagaaaat 32980543  T
Q  254 aa 255  Q
    ||    
T  32980544 aa 32980545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 26798903 - 26798999
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| ||||| ||||||||   |||| |||||||||||||||||||||||||||||| | ||||||| | | ||||||||||||||    
T  26798903 actaacggagaggaccaaaatggtaaacggaggaagaattatgggaccaaattgagacattttatagttaggggaccaaaataaaaaccaaaaataa 26798999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 47766943 - 47767043
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaata 254  Q
    |||| ||||||| ||||||| | | ||||||||||   |||| ||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||    
T  47766943 aaaaaactaacgcagaggacgacattagtaaacggaggaagacttatgggaccaaattgagacactttatagttagggaccaaaatgaaaaccaaaaata 47767042  T
Q  255 a 255  Q
    |    
T  47767043 a 47767043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 53808437 - 53808341
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||| ||| ||||| ||| |||||| |||||||    
T  53808437 actaatggagatgaccaaaatagtaaacgacataagatttatgggaccagattgagacactttatagttaggagaccaaattcaaaaccgaaaataa 53808341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 25583231 - 25583137
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||| |||||||||||||||| |||| |||||||||||||||||||| ||| ||||| | ||||||| | |||||| |||||||||    
T  25583231 taacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataa 25583137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 25585825 - 25585927
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||| ||||| || |||||| | ||||||  ||||||    
T  25585825 aaaaaactaacggagatgactaaaatagtaaacgacagaagatttatgagaccaaattgagacgtttaatagttagaggaccagagtgaaaataaaaaat 25585924  T
Q  254 aaa 256  Q
    |||    
T  25585925 aaa 25585927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 51401371 - 51401444
Alignment:
Q  183 taaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| | ||||||| | ||||||||||||||||    
T  51401371 taaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataa 51401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 51824315 - 51824182
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| ||||||||||||||   ||| ||||  |||||||| ||| ||||||||| |||||| |||||||||||| ||| ||| ||||| ||||| ||    
T  51824315 tttttaaatctaaccgttgatcactaattttaaccgacacgtgaaaaggagttaacaaattttgtaaaatactaacgcagatgacaaaaatggtaaatgg 51824216  T
Q  190 cataagatttatgggaccaaattgagacatttta 223  Q
     | ||||||||||  | |||||||||||| ||||    
T  51824215 tagaagatttatgaaatcaaattgagacacttta 51824182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 255
Target Start/End: Complemental strand, 11219548 - 11219453
Alignment:
Q  161 ctaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||||| |||||||| | ||||||| | ||||| ||||||||||    
T  11219548 ctaacggagatgaccaaaatagtaaacggcagaagactcatgagaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataa 11219453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 29537134 - 29537204
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    |||| ||||||||||||||| ||||| |||||||||| |||||||||||||| ||||| | ||||||||||    
T  29537134 aaaaaactaacggagaggaccaaaattgtaaacggcagaagatttatgggacgaaattaaaacattttata 29537204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 7820514 - 7820413
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||| |||| |||||||| ||||| ||||||||| ||||||||| ||| |||||||| || |||||| | |||||  |||||||    
T  7820514 aaaaaactaacggagaggaccaaaacagtaaacgacataaaatttatgggtccaaattgaaacactttatagttagaggaccaaaatgaaattcaaaaat 7820415  T
Q  254 aa 255  Q
    ||    
T  7820414 aa 7820413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 11220658 - 11220727
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||| |||| ||||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||    
T  11220658 aacggaggggaccaaaatagtaaacgacagaagatttataggaccaaattgagacactttatagttaggg 11220727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 19622124 - 19622028
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||  ||||||  ||| |||||||||| ||| ||||||||||| |||||||| | ||||||| | ||||||||||||||||    
T  19622124 actaacggagaggaccaaaccagtaaatagcagaagatttatgagactaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataa 19622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 10986828 - 10986750
Alignment:
Q  81 atgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaata 160  Q
    |||||| |||||| ||||| ||||||||||| | |||||||| ||||| ||||||| ||||||||| |||||||||||||    
T  10986828 atgtgtgctttttaaattc-aaccgttgatcattaatcttaactgacatgtggaaatgagttaacaaattttgcaaaata 10986750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 47854651 - 47854565
Alignment:
Q  115 aatcttaaatgacacgtggaaaagagtt-aacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttat 201  Q
    |||||||||||||| ||||| ||| ||| ||||| ||||| |||| ||||||||||||||| |||||||||||||| | |||||||||    
T  47854651 aatcttaaatgacatgtggacaagggtttaacagtttttgaaaaa-actaacggagaggaccaaaatagtaaacggaagaagatttat 47854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 23559938 - 23559880
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagaca 218  Q
    ||||||||||||||| ||||||||||||| || |||| |||||||| ||||||||||||    
T  23559938 actaacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagaca 23559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 48866315 - 48866193
Alignment:
Q  106 ttgatcgtcaatcttaaatgacacgtggaaaagag-ttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatggg 204  Q
    |||||| ||||||| |||||||||||| | ||| | ||||||  ||||| |||| ||||||||||||||| | | |||||||||| | |||| |||| ||    
T  48866315 ttgatcatcaatctaaaatgacacgtgaacaaggggttaacaatttttgaaaaaaactaacggagaggaccatattagtaaacggaagaagacttatagg 48866216  T
Q  205 accaaattgagacattttatagt 227  Q
    |||||||||| ||| || |||||    
T  48866215 accaaattgacacacttaatagt 48866193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 54752725 - 54752663
Alignment:
Q  170 aggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||| |||||||||||||||||||||| ||  |||||||||||||||| |||||||| ||||    
T  54752725 aggaccaaaatagtaaacggcataagatatacaggaccaaattgagacactttatagttaggg 54752663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 8372648 - 8372709
Alignment:
Q  195 gatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||||||||||||| |||||||| | ||||||| | ||||||||||||||||    
T  8372648 gatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataa 8372709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 10986755 - 10986674
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||||||| ||| |||||| |||||||||||| ||| ||||||| | | |||||| | |||||||||||||||||    
T  10986755 aaaatagtaaacggcgtaaaatttataggaccaaattgaaacactttatagttaatggaccaaagtgaaaaccaaaaataaa 10986674  T

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Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 48253057 - 48252980
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||| ||||||||||| ||||| | ||||||||||   |||| ||||||||||||||||||||| |||||||| ||||    
T  48253057 aaaaaactaacggagatgactacattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggg 48252980  T

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Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 43345443 - 43345371
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||| |||||||||||  || ||||| |||||||  | |||||||||||||||||||||| ||||||||||||    
T  43345443 aaaaaactaacggagaaaaccaaaatggtaaacgagagaagatttatgggaccaaattgaaacattttatagt 43345371  T

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Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 39133094 - 39133040
Alignment:
Q  202 gggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||    
T  39133094 gggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataa 39133040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 48035323 - 48035393
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||| |||| ||  ||||||||||||  || ||||||||||||||||| |||||||| ||||    
T  48035323 taacggagaggaccaaaagaggtaacggcataagacataagggaccaaattgagacactttatagttaggg 48035393  T

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Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 49122002 - 49122095
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||| | ||| ||||| |||||||||| || | ||||| ||||||||||||||| ||||||| | || ||||| | ||||||||||||||||    
T  49122002 aacggaaaagaccaaaatggtaaacggcagaaaacttatgagaccaaattgagacactttatagttaagagaccaaaatgaaaaccaaaaataa 49122095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 49334329 - 49334430
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaat 253  Q
    |||| |||||| |||| ||  |||||||||||||| | ||||||||| |||||| ||||||||| ||||||| | | |||||| | ||||||| ||||||    
T  49334329 aaaaaactaacagagatgatcaaaatagtaaacggtagaagatttatcggaccatattgagacaatttatagttaaaggaccaaaatgaaaacaaaaaat 49334428  T
Q  254 aa 255  Q
    ||    
T  49334429 aa 49334430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 51400331 - 51400238
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg-accatattgaaaaccaaaaataa 255  Q
    |||||| ||||| ||||| ||| |||||  || ||||||||||| ||||||||||| |||||||| |||| | || | ||||||||||||||||    
T  51400331 aacggaaaggaccaaaatggtatacggctgaaaatttatgggactaaattgagacactttatagttagggaatcaaagtgaaaaccaaaaataa 51400238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 17350099 - 17350195
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||| ||  ||| | | ||||  || ||||||||||||||||| |||||||| | |||| || ||||||||||||||||||    
T  17350099 actaacggagaggaccaaaagaggtaacaggagaagacataagggaccaaattgagacactttatagttaggggaacaaattgaaaaccaaaaataa 17350195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 32973258 - 32973186
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||||| |||| ||  ||||||| ||||  || ||||||||||||||||| |||||||| ||||    
T  32973258 actaacggagaggacaaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggg 32973186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 36627923 - 36628009
Alignment:
Q  57 tatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaa 144  Q
    ||||||||| ||||| ||| ||  |||||| |||||| ||| | ||||||| ||| |||||||||||||||| || ||||||||||||    
T  36627923 tatgttgtgagtccacggtatgctatgtgtgctttttaaatcc-aaccgttcatcatcaatcttaaatgacatgtagaaaagagttaa 36628009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 12060771 - 12060710
Alignment:
Q  166 ggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||| |||||||||||||||| || | ||||| | ||||||||||||| || |||||    
T  12060771 ggagaggaccaaaatagtaaacggcaaaatagttatgaggccaaattgagacacttaatagt 12060710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 53049034 - 53049106
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||||| |||| ||  |||| || ||||  || ||||||||||||||||| |||||||| ||||    
T  53049034 actaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggg 53049106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 22061684 - 22061888
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||| | ||||| | | ||| |||||| |||||| ||| | |||||||||||  |||||||||||||||||||| || |||||||||| ||    
T  22061684 ttatcatatgttgcgagtccacgatatgtcatgtgtgctttttaaatcc-aaccgttgatccccaatcttaaatgacacgtggcaaggagttaacaggtt 22061782  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| |||||||||  |    
T  22061783 ttgcaaaatactaacggagaagactaaaatagtaaacggcataagatttatgggaccaaattgagacgttttatagttaggggaccaaattgaaaacaca 22061882  T
Q  250 aaataa 255  Q
    ||||||    
T  22061883 aaataa 22061888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 37 - 214
Target Start/End: Original strand, 35128067 - 35128242
Alignment:
Q  37 aataataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaa 136  Q
    |||| |||||||||| ||||||||||| ||||||||||| |||||||||| |||||| ||| | |||||||||||  |||||||||||||||||||||||    
T  35128067 aatattaataataatgatcatatgttgcgcgtccagggtatgtaatgtgtgctttttaaatcc-aaccgttgatcaccaatcttaaatgacacgtggaaa 35128165  T
Q  137 agagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
     |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  35128166 ggagttaacagattttgcaaaatactaac-gagaggaccaaaatagtaaacgacataagatttataggaccaaattga 35128242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 42 - 252
Target Start/End: Complemental strand, 35128046 - 35127836
Alignment:
Q  42 taataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagt 141  Q
    |||||||||||||||||||||||| || |||| | ||||| |||| |||||| ||||| |||||||||||    ||||||| ||||||||||||| ||||    
T  35128046 taataataattatcatatgttgtgtgttcaggatatgtaacgtgtgctttttaaattc-aaccgttgatcactgatcttaactgacacgtggaaaggagt 35127948  T
Q  142 taacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatatt 240  Q
    ||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| || | |||| |||    
T  35127947 taacagattttgcaaaatattaacgaagatgaccaaaatagtaaacggcataagatttatgggacaaaattgagacattttatagttagagaaccaaatt 35127848  T
Q  241 gaaaaccaaaaa 252  Q
     |||||||||||    
T  35127847 taaaaccaaaaa 35127836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 19279501 - 19279705
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||| ||| ||| | | | ||| |||||| |||||||||||| |||||||||||   |||||||| ||||||||||||| |||||||||||||    
T  19279501 ttatcatatgtagtgagtctatgatatgtcatgtgtgcttttttaattc-aaccgttgatcaagaatcttaactgacacgtggaaatgagttaacagatt 19279599  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||||||||||| ||||| ||||||||||||| || || ||||||||||||||||||||||| |||||||| | ||||||| | ||||||||||    
T  19279600 ttgcaaaatactaacggaaaggaccaaaatagtaaacgacaaaaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaa 19279699  T
Q  250 aaataa 255  Q
    ||||||    
T  19279700 aaataa 19279705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 43007536 - 43007742
Alignment:
Q  49 aattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacaga 148  Q
    |||||||| |||||||  ||||| ||| ||| ||||||  |||| ||| || | |||||||||  |||| |||||||||||| ||||| |||||||||||    
T  43007536 aattatcacatgttgtaagtccatggtatgtcatgtgtg-ttttgtaaatccagccgttgatcaacaattttaaatgacacgcggaaatgagttaacaga 43007634  T
Q  149 ttttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaacc 247  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| || |||||| |||||||| |    
T  43007635 ttttgcaaaatactaacggagagaactaaaatagtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaatc 43007734  T
Q  248 aaaaataa 255  Q
    ||||||||    
T  43007735 aaaaataa 43007742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 22746209 - 22746413
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||| ||||||||| ||||| ||| ||  |||||| ||| || ||||| |||| ||||||   |||||||||||| | ||||||| ||||||||| |||    
T  22746209 ttatcgtatgttgtgagtccacggtatgctatgtgtgcttcttaaattc-aaccattgatcacgaatcttaaatgatatgtggaaaggagttaacaaatt 22746307  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||| | ||||||||| ||    
T  22746308 ttgcaaaatactaacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaa 22746407  T
Q  250 aaataa 255  Q
    ||||||    
T  22746408 aaataa 22746413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 255
Target Start/End: Complemental strand, 46673663 - 46673513
Alignment:
Q  105 gttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatggg 204  Q
    ||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||    
T  46673663 gttgatcatcaatcttaagtgacatgtggaaaaaagttaacagattttgcaaaatactaatggagaggaccaacatagtaaac-gcataagatttatggg 46673565  T
Q  205 accaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||| ||| ||||| || | ||||||| ||||||||||||||||||    
T  46673564 accaaattgaaacactttattgttaggggaccaaattgaaaaccaaaaataa 46673513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 255
Target Start/End: Original strand, 46674860 - 46675027
Alignment:
Q  89 ttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacg 188  Q
    |||||||| || ||||  |||||  ||||||||||||| || || |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  46674860 ttttttaaatccaaccaatgatcaccaatcttaaatgagacatgaaaaatagttaacagattttgcaaaataataacggagaggaccaaaatagtaaacg 46674959  T
Q  189 gcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||| ||||||||||||||||||| |||||| ||||||| | ||||| || ||||||||||||||||||    
T  46674960 gcaaaagatttatgggaccaaatcgagacactttatagttaagggatcaaattgaaaaccaaaaataa 46675027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 90 - 255
Target Start/End: Complemental strand, 22060652 - 22060486
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || |||||||||||  |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||| ||||||||||||||    
T  22060652 tttttaaatccaaccgttgatcaccaatcttaaatgactcgtggaaatgagttaacagattttgtaaaatactaacggagatgaccaaaatagtaaacgg 22060553  T
Q  190 cataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||||| || ||| |||||||||||||| |||||||| || |||||| ||| |||||  |||||||    
T  22060552 cataagacttgtggaaccaaattgagacactttatagttagaggaccaaattaaaaacacaaaataa 22060486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 255
Target Start/End: Complemental strand, 22744924 - 22744769
Alignment:
Q  101 aaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagattta 200  Q
    |||||||||||   |||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  22744924 aaccgttgatcacaaatcttaaatgacatgtggaaaggagttaacaaattttgcaaaatattaacggagaagaccaaaatagtaaacggcataagattta 22744825  T
Q  201 tgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    | |||||||||||| ||| |||||||| | ||||| | |||||||| |||||||||    
T  22744824 taggaccaaattgaaacactttatagttaggggactaaattgaaaatcaaaaataa 22744769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 255
Target Start/End: Complemental strand, 7146968 - 7146803
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |     
T  7146968 tttttaaatccaaccgttcatcatcaatcttaaatgacatgtggaaaagagttaacagattttgcaaaatactaatggagaggaccaaaacagtaaatga 7146869  T
Q  190 cataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||  |||||||||||| ||| |||||||| | ||||||| |||||||||  |||||||    
T  7146868 cataagattta-aggaccaaattgaaacactttatagttaggggaccaaattgaaaacagaaaataa 7146803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 223
Target Start/End: Original strand, 48672662 - 48672835
Alignment:
Q  49 aattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacaga 148  Q
    ||||||||||| ||||| ||||| | | | | |||| | |||||| ||||| |||| |||| || |||||||||||||||  |||||| |||||||||||    
T  48672662 aattatcatatcttgtgagtccacgatatttcatgtctgctttttaaattc-aacctttgaacgccaatcttaaatgacaattggaaaggagttaacaga 48672760  T
Q  149 ttttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacatttta 223  Q
    |||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||| ||||    
T  48672761 ttttgcaaaatactaacggagaggactaaaatagtaaacgacacgcgatttatgggaccaaattgagacacttta 48672835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 255
Target Start/End: Complemental strand, 19278595 - 19278376
Alignment:
Q  37 aataataataataattatcatatgtt-gtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaa 135  Q
    |||||||||||| ||||||||||||| ||| ||||| ||| ||  |||||| |||||| ||| | |||||||||||   ||| |||| ||||| ||||||    
T  19278595 aataataataattattatcatatgtttgtgagtccacggtatggtatgtgttctttttaaatcc-aaccgttgatcaagaattttaactgacatgtggaa 19278497  T
Q  136 aagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttat-agtcagggac 234  Q
    | || ||||||||||||||||| | |||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||| ||||| | | ||||||    
T  19278496 atgaattaacagattttgcaaattcctaacgaagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttataattaagggac 19278397  T
Q  235 catattgaaaaccaaaaataa 255  Q
    || | ||||| ||||||||||    
T  19278396 caaaatgaaatccaaaaataa 19278376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 105 - 255
Target Start/End: Complemental strand, 43006559 - 43006408
Alignment:
Q  105 gttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatggg 204  Q
    |||||||  ||||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||||| ||| ||||||| ||||||||||||| ||| |||    
T  43006559 gttgatcaccaatcttaaatgacatgtgaaaatgagttaacaaattttgtaaaatactaacggagatgaccaaaatagcaaacggcataagacttagggg 43006460  T
Q  205 accaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||| || ||||| | ||||||| ||||||||||||||||||    
T  43006459 accaaattgagacacttaatagttaggggaccaaattgaaaaccaaaaataa 43006408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 255
Target Start/End: Original strand, 7147985 - 7148151
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || ||||||| |||   |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| || |||| ||||||||     
T  7147985 tttttaaatccaaccgttcatcaataatcttaaatgacatgtggaaaagaggtaacaaattttgcaaaatactaacggagagaaccaaaacagtaaacga 7148084  T
Q  190 cataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||| ||||||||||||| ||| |||||||| ||  ||||| |||||||||  |||||||    
T  7148085 cataagatttaagggaccaaattgaaacactttatagttagatgaccaaattgaaaacagaaaataa 7148151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 89 - 256
Target Start/End: Complemental strand, 48671267 - 48671100
Alignment:
Q  89 ttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacg 188  Q
    |||||||| |||||| |||||||  ||||||||||||||| ||||||| |||| |||| ||||| ||||||||| |||||||| ||  ||||||||||||    
T  48671267 ttttttaaatctaactgttgatcaccaatcttaaatgacaagtggaaaggagtaaacaaatttttcaaaatactgacggagagaaccgaaatagtaaacg 48671168  T
Q  189 gcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||||| ||| |||||||||| | ||||||| | || || || ||| |||||||||||||||    
T  48671167 gcataagatttat-ggatcaaattgagatactttatagttaagagatcaaattaaaaaccaaaaataaa 48671100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 36702911 - 36703010
Alignment:
Q  124 tgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacatttta 223  Q
    ||||| |||||||  |||||||||||||||||||||| ||||||| ||||| |||||||||||||||| || ||||||||||||||||||||||| ||||    
T  36702911 tgacatgtggaaagaagttaacagattttgcaaaataataacggaaaggaccaaaatagtaaacggcagaatatttatgggaccaaattgagacagttta 36703010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 4857320 - 4857224
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||| | ||||||| | ||||||||||||||||    
T  4857320 actaacggagaggactaaaacagtaaacggcagaagatttgtgggaccaaatcgagacattttatagttaggggaccaaagtgaaaaccaaaaataa 4857224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 47163316 - 47163175
Alignment:
Q  115 aatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    |||||||||||||| ||||| ||| |||||||  ||||| |||| ||||||||||||||| |||||||||||||| | |||||||||||||||||||| |    
T  47163316 aatcttaaatgacatgtggacaagggttaacaatttttgaaaaa-actaacggagaggaccaaaatagtaaacggaaaaagatttatgggaccaaattaa 47163218  T
Q  215 gacattttatagtcag-ggaccatattgaaaaccaaaaataaa 256  Q
    | || |||||||| || |||||| | | ||| |||||||||||    
T  47163217 ggcactttatagttagaggaccaaaataaaatccaaaaataaa 47163175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 48754186 - 48754050
Alignment:
Q  89 ttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaata-ctaacggagaggactaaaatagtaaac 187  Q
    |||||||| || | |||||||||  |||||||||  |||||||||||  |||||||| |||||||||||| | |||||||||||||||||||| ||||||    
T  48754186 ttttttaaatccagccgttgatcaccaatcttaagggacacgtggaag-gagttaacggattttgcaaaaaatctaacggagaggactaaaatggtaaac 48754088  T
Q  188 ggcataagatttatgggaccaaattgagacattttata 225  Q
    | |||||||||||| |||| ||||||| ||| ||||||    
T  48754087 gacataagatttataggactaaattgaaacactttata 48754050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 7347156 - 7347282
Alignment:
Q  101 aaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaata--ctaacggagaggactaaaatagtaaacggcataagatt 198  Q
    |||||||||||  ||||||||||  |||||||| || ||| |||  |||||||||||| |  ||||||||||||| |||||| ||||||| |||||||||    
T  7347156 aaccgttgatcaccaatcttaaaaaacacgtggcaaggagctaatggattttgcaaaaaaatctaacggagaggattaaaatggtaaacgacataagatt 7347255  T
Q  199 tatgggaccaaattgagacattttata 225  Q
    ||| |||||||||||||||| ||||||    
T  7347256 tataggaccaaattgagacactttata 7347282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 46458713 - 46458804
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaat 253  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||||||||||||| ||||||| | |||||||| |||||||| |||||||    
T  46458713 aacggagaggaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttaagggaccaaattgaaaatcaaaaat 46458804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 14206797 - 14206695
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||| ||  ||||||||||||| || ||||||||| |||||||||||| |||||||||||| ||| ||||| | ||||||||||||||    
T  14206797 aaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttaggcgaccaaagtgaaaaccaaaaat 14206698  T
Q  254 aaa 256  Q
    |||    
T  14206697 aaa 14206695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 14215487 - 14215385
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||| ||  ||||||||||||| || ||||||||| |||||||||||| |||||||||||| ||| ||||| | ||||||||||||||    
T  14215487 aaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttaggcgaccaaagtgaaaaccaaaaat 14215388  T
Q  254 aaa 256  Q
    |||    
T  14215387 aaa 14215385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 43936075 - 43936233
Alignment:
Q  98 tctaaccgttgatcgtcaatcttaaatgacacgtggaaaagag-ttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataaga 196  Q
    ||||||| |||||| ||||| |||||||||| ||||| ||  | ||||| | ||||| |||| ||||||||||||||| ||||||||||||| || ||||    
T  43936075 tctaaccattgatcatcaattttaaatgacatgtggacaattggttaactgtttttgaaaaa-actaacggagaggaccaaaatagtaaacgacagaaga 43936173  T
Q  197 tttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
     ||||| ||||||||| ||| | |||||||| || |||||| | ||||| ||||||||||    
T  43936174 attatgagaccaaattaagaaactttatagttagaggaccaaaatgaaatccaaaaataa 43936233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 4858335 - 4858413
Alignment:
Q  154 caaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||| |||||  ||||||| |||||||||||||  || ||||||||||||||||||||||||||||||||||| ||||    
T  4858335 caaaaaactaatagagaggattaaaatagtaaacaacagaagatttatgggaccaaattgagacattttatagttaggg 4858413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 33458474 - 33458333
Alignment:
Q  115 aatcttaaatgacacgtggaaaagag-ttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattg 213  Q
    |||||||||||||||||||| ||| | ||||||| ||||| || | ||||||||||||||| | | |||||||||| | |||| |||||||| | |||||    
T  33458474 aatcttaaatgacacgtggacaaggggttaacagtttttgaaacaaactaacggagaggaccacattagtaaacggaagaagacttatggga-ctaattg 33458376  T
Q  214 agacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||||| | | |||||| | ||||||||||||||||    
T  33458375 agacactttatagttaaaggaccaaaatgaaaaccaaaaataa 33458333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 13446650 - 13446751
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||| || ||| ||||||||| |||||||||||||||||||||||||| | ||||| | | | |||| | ||||||||||||||    
T  13446650 aaaaaactaacggagaggaccaatataataaacggcagaagatttatgggaccaaattgagacactatatagttgaagaaccaaagtgaaaaccaaaaat 13446749  T
Q  254 aa 255  Q
    ||    
T  13446750 aa 13446751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 43935309 - 43935208
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaat 253  Q
    |||| ||||| || |||||  |||||||||||||||| |||||||||| ||||||||||||||| |||||||| || |||||| | ||||| ||||||||    
T  43935309 aaaaaactaatggggaggatgaaaatagtaaacggcagaagatttatgagaccaaattgagacactttatagttagaggaccaaaatgaaatccaaaaat 43935210  T
Q  254 aa 255  Q
    ||    
T  43935209 aa 43935208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 40926518 - 40926612
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||| ||||  |||||||| | || |||||| |||||||||||||||| |||||||| | ||||||| | ||||||||||||||||    
T  40926518 taacggagaggaccaaaacggtaaacggtagaaaatttataggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataa 40926612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 40930530 - 40930440
Alignment:
Q  167 gagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataaa 256  Q
    |||||||||||||  ||||||  || |||||||||||||||||||||| ||| |||||||| | ||||||| | |||||||||||||||||    
T  40930530 gagaggactaaaacggtaaacatcaaaagatttatgggaccaaattgaaacactttatagttaggggaccaaagtgaaaaccaaaaataaa 40930440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 43930436 - 43930342
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||| ||||||||||||| || ||||||||| ||||||||||||||| ||| ||||| | ||||||| | |||||| |||||||||    
T  43930436 taacagagaggaccaaaatagtaaacgacagaagatttataggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataa 43930342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 46457173 - 46457093
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||| || | |||||||||||||||||||||||||| ||||||| | ||||| || ||||||||||||||||||    
T  46457173 aaaatggtaaatggaagaagatttatgggaccaaattgagacactttatagttaagggatcaaattgaaaaccaaaaataa 46457093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 27899211 - 27899278
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||| | ||| ||||||||||||| || ||||||||||||| |||||||||| ||||||||||    
T  27899211 actaacggataagaccaaaatagtaaacgacaaaagatttatgggatcaaattgagatattttatagt 27899278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 38406135 - 38406040
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataaa 256  Q
    ||||||| ||||| |||| |||||||| || ||||||||||| ||||  |||||||| |||||||| | ||||||| | |||||||||||||||||    
T  38406135 taacggaaaggaccaaaacagtaaacgtcagaagatttatggaaccagtttgagacactttatagttaggggaccaaaatgaaaaccaaaaataaa 38406040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 25153755 - 25153681
Alignment:
Q  182 gtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||| | |||||||||||||||||||||||||| |||||||| | ||||||| |||||||| | |||||||    
T  25153755 gtaaacggaagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcgaaaataa 25153681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 28326382 - 28326483
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||| | ||||||||||||   |||| |||| | |||||||||||||| |||||||||||| ||||| | | ||||||||||||    
T  28326382 aaaaaactaacggagaggaccacaatagtaaacggaggaagacttatagaaccaaattgagacactttatagtcaggagaccaaaat-aaaaccaaaaat 28326480  T
Q  254 aaa 256  Q
    |||    
T  28326481 aaa 28326483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 24873597 - 24873666
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||| | ||| ||||| |||||||||| |||| ||||||||||||||||||||| |||||||| ||||    
T  24873597 aacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgagacactttatagttaggg 24873666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 255
Target Start/End: Complemental strand, 36702909 - 36702800
Alignment:
Q  148 attttgcaaaatactaac-ggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaa 245  Q
    |||||||||| ||||||| ||| | ||  |||||||||||||||| || ||||||||||||||||||||||| |||| || | |||||||| | |||||     
T  36702909 attttgcaaattactaaccggaaatgatcaaaatagtaaacggcagaatatttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaat 36702810  T
Q  246 ccaaaaataa 255  Q
    | ||||||||    
T  36702809 ctaaaaataa 36702800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 33459560 - 33459636
Alignment:
Q  180 tagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||   |||| ||||||||||||||||||||| |||||||| || |||||| | ||||||||||||||||    
T  33459560 tagtaaacggaggaagacttatgggaccaaattgagacactttatagttagaggaccaaaatgaaaaccaaaaataa 33459636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 14107957 - 14107855
Alignment:
Q  154 caaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaa 252  Q
    ||||| ||||||||||||||| ||||  || |||| || ||||| || |||||||  |||||||| ||||||| | |||||||| | |||||||||||||    
T  14107957 caaaaaactaacggagaggaccaaaacggtgaacgacagaagatataagggaccactttgagacactttatagttaagggaccaaaatgaaaaccaaaaa 14107858  T
Q  253 taa 255  Q
    |||    
T  14107857 taa 14107855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 14417914 - 14417812
Alignment:
Q  154 caaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaa 252  Q
    ||||| ||||||||||||||| ||||  || |||| || ||||| || |||||||  |||||||| ||||||| | |||||||| | |||||||||||||    
T  14417914 caaaaaactaacggagaggaccaaaacggtgaacgacagaagatataagggaccactttgagacactttatagttaagggaccaaaatgaaaaccaaaaa 14417815  T
Q  253 taa 255  Q
    |||    
T  14417814 taa 14417812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 35315219 - 35315273
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    |||||| ||||||||||||| |||||||| || |||| |||||||||||||||||    
T  35315219 actaacagagaggactaaaacagtaaacgacagaagacttatgggaccaaattga 35315273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 43931858 - 43931960
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaat 253  Q
    |||| |||||||||| |||| ||||||||||| | || ||| |||||||||||||||||| || ||| ||||| || |||||| | ||||||  ||||||    
T  43931858 aaaaaactaacggaggggaccaaaatagtaaatgacagaaggtttatgggaccaaattgatacgtttaatagttagaggaccagagtgaaaataaaaaat 43931957  T
Q  254 aaa 256  Q
    |||    
T  43931958 aaa 43931960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 1970912 - 1970835
Alignment:
Q  180 tagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||| ||| ||||||||||||||||||| ||| ||||||| | ||| |||| | | |||||||||||||||    
T  1970912 tagtaaacggcgtaatatttatgggaccaaattgaaacactttatagttaaggaaccaaagtaaaaaccaaaaataaa 1970835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 14109068 - 14109162
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||  |||||||||| ||||   |||||||||  |||||||||||||||| | |||||||| | ||||||  ||||||||    
T  14109068 actaacggagaggactaaaacggtaaacggcaaaaga--catgggaccagtttgagacattttatagttaagggaccaaagtgaaaattaaaaataa 14109162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 14419025 - 14419119
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||  |||||||||| ||||   |||||||||  |||||||||||||||| | |||||||| | ||||||  ||||||||    
T  14419025 actaacggagaggactaaaacggtaaacggcaaaaga--catgggaccagtttgagacattttatagttaagggaccaaagtgaaaattaaaaataa 14419119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 19848867 - 19848927
Alignment:
Q  196 atttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||||| ||||||| | |||||||| | ||||| ||||||||||    
T  19848867 atttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataa 19848927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 10257382 - 10257450
Alignment:
Q  157 aatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||| || | ||||||||||||||||| ||  ||| ||||||||||||||||||||| || |||||    
T  10257382 aatactaacagaaatgactaaaatagtaaacgaca--agagttatgggaccaaattgagacacttaatagt 10257450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 13286991 - 13287058
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||| ||||||| |||||||||||| ||||||||  || ||||||||||||| ||| || |||||    
T  13286991 actaacgaagaggaccaaaatagtaaacagcataagacataagggaccaaattgaaacacttaatagt 13287058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 36673786 - 36673905
Alignment:
Q  114 caatcttaaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaatt 212  Q
    ||||||||||||||| ||||| |||  |||||   ||||| ||| | |||||| |||||||| |||| ||  |||| || ||||  || |||||||||||    
T  36673786 caatcttaaatgacatgtggacaaggattaactatttttgaaaacaaactaactgagaggaccaaaagaggtaacgacagaagacataagggaccaaatt 36673885  T
Q  213 gagacattttatagtcaggg 232  Q
    ||||||||||||||| ||||    
T  36673886 gagacattttatagttaggg 36673905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 41515082 - 41515019
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaataaa 256  Q
    |||| ||||||||||||||||| ||| |||||||| ||| |||| | | |||||||||||||||    
T  41515082 aagacttatgggaccaaattgaaacactttatagttaggaaccaaaattaaaaccaaaaataaa 41515019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 25154936 - 25155029
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||||| ||| |||||  ||||| | | |||||||||| ||  ||||||||||| ||||||| | ||||| || ||||||||||||||||||    
T  25154936 aacggagatgaccaaaatgataaacagaagaagatttatgagattaaattgagacactttatagttaagggatcaaattgaaaaccaaaaataa 25155029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 45721758 - 45721859
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||  | | ||||||||||   || | |||||| |||||||||||||| |||||||| | ||||||| | ||||||| ||||||    
T  45721758 aaaaaactaacggagaggatcacattagtaaacggaggaaaacttatggaaccaaattgagacactttatagttaggggaccaaaatgaaaactaaaaat 45721857  T
Q  254 aa 255  Q
    ||    
T  45721858 aa 45721859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 18801298 - 18801262
Alignment:
Q  196 atttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  18801298 atttatgggaccaaattgagacactttatagttaggg 18801262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 30223973 - 30224045
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||||| |||| |   ||||||| ||||  || ||||||||||||||||| |||||||| ||||    
T  30223973 actaacggagaggaccaaaagatgtaacggcagaagacataagggaccaaattgagacaatttatagttaggg 30224045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 51 - 255
Target Start/End: Complemental strand, 25786195 - 25785991
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    |||| |||||||||| ||||| ||| ||| |||||| |||||| ||| | |||||||||||  |||||||||||||||||||  |||||||||||| |||    
T  25786195 ttattatatgttgtgagtccatggtatgtcatgtgtgctttttaaatcc-aaccgttgatcaccaatcttaaatgacacgtgacaaagagttaacaaatt 25786097  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    ||||||||||||||| |||||||| |||||| |||||| ||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  25786096 ttgcaaaatactaacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaa 25785997  T
Q  250 aaataa 255  Q
    ||||||    
T  25785996 aaataa 25785991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 90 - 255
Target Start/End: Original strand, 25787091 - 25787257
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| || |||||||||||  |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||    
T  25787091 tttttaaatccaaccgttgatcaccaatcttaaatgacacgtgacaaagagttaacaaattttgcaaaatactaacggagaggaccaaaatagtaaatgg 25787190  T
Q  190 cataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||| ||||||||||||||| |||||||| | ||||||| ||||||||||||||||||    
T  25787191 cataagatttatgagaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataa 25787257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 47411337 - 47411541
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||| ||| ||||| ||||| | | ||| |||||| |||||| ||||| |||||||||||  ||||||||||||||| |||| ||||||||||||||||    
T  47411337 ttatcgtatcttgtgagtccacgatatgtcatgtgtgctttttaaattc-aaccgttgatcaccaatcttaaatgacatgtggcaaagagttaacagatt 47411435  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg-accatattgaaaaccaa 249  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||| || ||||||| |    
T  47411436 ttgcaaaatactaacggagagaatcaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttagggaaccaaatggaaaaccga 47411535  T
Q  250 aaataa 255  Q
    ||||||    
T  47411536 aaataa 47411541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 90 - 255
Target Start/End: Complemental strand, 16217629 - 16217463
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| |     
T  16217629 tttttaaatctaaccgttgatcgccaatcttaaatgacacgtggaaatgagttaacagattttgcaaaatactaacggagatgaccaaaatagtaaatga 16217530  T
Q  190 cataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||| |||||||||||||||| |||||||| ||  || || ||| ||||||||||||||    
T  16217529 cataagatttataggaccaaattgagacactttatagttagatgatcaaattaaaaaccaaaaataa 16217463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 47136576 - 47136780
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||| ||| ||  |||||| |||| | ||| | ||||||| ||| |||||||||| |||||| ||||||  ||||||||||||    
T  47136576 ttatcatatgttgtgagtccacggtatgccatgtgtgctttataaatcc-aaccgttcatcatcaatcttaagtgacacatggaaagaagttaacagatt 47136674  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||||| | ||||||  ||||||||||||    
T  47136675 tttcaaaatactaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttaggggacctaattgaaaaccaa 47136774  T
Q  250 aaataa 255  Q
    ||||||    
T  47136775 aaataa 47136780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 43 - 256
Target Start/End: Original strand, 16218359 - 16218572
Alignment:
Q  43 aataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagtt 142  Q
    ||||| ||||||||||||||||| ||| | ||| ||| | |||| |||||| ||||| |||||||||||  |||| ||||||||||  |||||| |||||    
T  16218359 aataagaattatcatatgttgtgagtctacggtatgtcacgtgtgctttttaaattc-aaccgttgatcaccaattttaaatgacatatggaaatgagtt 16218457  T
Q  143 aacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattg 241  Q
    || ||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||||| | |||||||| | |||| || || |    
T  16218458 aatagattttgcaaaatactaacggagatgaccaaaatattaaacgacataagatttatgggaccaaattgagatactttatagttaggggatcagatag 16218557  T
Q  242 aaaaccaaaaataaa 256  Q
    ||||| |||||||||    
T  16218558 aaaactaaaaataaa 16218572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 51 - 255
Target Start/End: Complemental strand, 47411210 - 47411007
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    |||||||||||| || ||||| | | ||| |||||| |||||  || || ||| |||||||  ||||||||||||||| |||  |||||||||||| |||    
T  47411210 ttatcatatgttatgagtccacgatatgtcatgtgtgctttt--aaatccaactgttgatcaccaatcttaaatgacatgtgacaaagagttaacaaatt 47411113  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||| | |||| || |||||||| |||    
T  47411112 ttgcaaaatactaacggagatgaccaaaatagtaaacgacataagatttatgagaccaaattgagacactttatagttaggggatcaaattgaaaatcaa 47411013  T
Q  250 aaataa 255  Q
    ||||||    
T  47411012 aaataa 47411007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 255
Target Start/End: Original strand, 52181199 - 52181398
Alignment:
Q  56 atatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgca 155  Q
    |||||||||| || || ||| ||| |||||| |||||| ||| | |||||||||||  ||||||||||||||| |||  |||||||||||||||||||||    
T  52181199 atatgttgtgagttcacggtatgtcatgtgtgctttttaaatcc-aaccgttgatcaccaatcttaaatgacatgtgacaaagagttaacagattttgca 52181297  T
Q  156 aaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaata 254  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||||| ||| ||||||||||| |||||||| || |||||| ||||||||  |||||||    
T  52181298 aaatattaacggagatgaccaaaatagtaaacaacataagatttatgagactaaattgagacactttatagttagaggaccaaattgaaaataaaaaata 52181397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 37 - 255
Target Start/End: Original strand, 3979186 - 3979406
Alignment:
Q  37 aataataataataattatcatatgtt-gtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtc-aatcttaaatgacacgtgga 134  Q
    ||||||||||| |||||||||||||| ||| ||||| ||| ||  |||||| |||||| ||| | |||||||||||    |||||||| ||||| |||||    
T  3979186 aataataataagaattatcatatgtttgtgagtccacggtatggcatgtgttctttttaaatcc-aaccgttgatcaaagaatcttaagtgacatgtgga 3979284  T
Q  135 aaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcaggga 233  Q
    || || |||| |||||||||||| | |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||| ||||||| | |||||    
T  3979285 aatgaattaatagattttgcaaattcctaacggagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttatagttaaggga 3979384  T
Q  234 ccatattgaaaaccaaaaataa 255  Q
    ||| | ||||| ||||||||||    
T  3979385 ccaaaatgaaatccaaaaataa 3979406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 227
Target Start/End: Complemental strand, 3978271 - 3978096
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||| ||| ||  |||||| |||||| ||| | |||| ||||||   |||||||| ||||| || |||| |||||||||||||    
T  3978271 ttatcatatgttgtgagtccacggtatggcatgtgttctttttaaatcc-aaccattgatcaagaatcttaactgacatgtagaaatgagttaacagatt 3978173  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||| |  ||||||||||||| ||||||||||||| || |||| |||||||| |||||||||||| ||||||||    
T  3978172 ttgcaaatttttaacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactttatagt 3978096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 42248247 - 42248398
Alignment:
Q  105 gttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaata-ctaacggagaggactaaaatagtaaacggcataagatttatgg 203  Q
    |||||||  |||||||||| |||||||||||  |||||||| |||||||||||| | |||||| ||||||||||||| ||||||| |||||||||||| |    
T  42248247 gttgatcaccaatcttaaaggacacgtggaag-gagttaacggattttgcaaaaaatctaacgaagaggactaaaatggtaaacgacataagatttatag 42248345  T
Q  204 gaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||||||| | ||||||| | ||||| ||||||||||    
T  42248346 gaccaaattgagacactttatagttatgggaccaaaatgaaatccaaaaataa 42248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 13641374 - 13641280
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||||| | ||||||||||||||||    
T  13641374 taacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataa 13641280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 26056145 - 26056240
Alignment:
Q  161 ctaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||||| | ||||||| | ||||| ||||||||||    
T  26056145 ctaacggagaggaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataa 26056240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 13930675 - 13930768
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    |||||| ||||| ||||| ||||||| ||||||| ||||||||||||||||||||| |||||||| || |||||| ||||||||||||||||||    
T  13930675 aacggaaaggaccaaaatggtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataa 13930768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 21277113 - 21277017
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||| | |||||||| |||  |||| ||||||||||||||||||    
T  21277113 actaatggagaggatcaaaatagtaaacggcagaagatttatgggaccaaattgagatactttatagttaggcaaccaaattgaaaaccaaaaataa 21277017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 14071203 - 14071297
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataaa 256  Q
    |||||| ||||| ||||| ||||||| || |||| ||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  14071203 aacggaaaggaccaaaatggtaaacgacagaagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataaa 14071297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 14390418 - 14390310
Alignment:
Q  120 taaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagaca 218  Q
    ||||||||| ||||| |||||||| | | ||||| ||| | ||||||||||||||| ||||| |||||||  | ||||||||||| ||||||||||||||    
T  14390418 taaatgacatgtggacaagagttagctgtttttgaaaataaactaacggagaggaccaaaatggtaaacgaaagaagatttatggaaccaaattgagaca 14390319  T
Q  219 ttttatagt 227  Q
    |||||||||    
T  14390318 ttttatagt 14390310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 36511328 - 36511395
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||| ||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  36511328 actaacggagatgaccaaaatagtaaacgacagaagatttatgggaccaaattgagacactttatagt 36511395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 51726841 - 51726908
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||    
T  51726841 actaacggtgaggactaaaatagtaaacgacagaagatttatggaaccaaattgagacactttatagt 51726908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 14169722 - 14169671
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  14169722 aaaatagtaaacgacaaaagatttatgggaccaaattgagacattttatagt 14169671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 19466202 - 19466269
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||| || | ||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  19466202 actaacggagagaaccacaatagtaaacgacagaagatttatgggaccaaattgagacactttatagt 19466269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 36509930 - 36509863
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||| || |||||||||||||||| ||||||||||| |||||||||| ||| ||||||||    
T  36509930 actaacggagagaaccaaaatagtaaacggcagaagatttatggaaccaaattgaaacactttatagt 36509863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 20953406 - 20953340
Alignment:
Q  161 ctaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||||||||||| ||||| | | |||||||||| |||||||||||||||| ||||||||    
T  20953406 ctaacggagaggactaaaatggtaaatgacttaagatttataggaccaaattgagacactttatagt 20953340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 13929391 - 13929318
Alignment:
Q  183 taaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||| | |||||||| ||||||||||||||||| ||||||| | |||||||| ||||||||||||||||||    
T  13929391 taaacggaagaagatttacgggaccaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataa 13929318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 49139925 - 49139824
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| |||||||||||  || |||||||||||| ||  |||||||||| ||||||||||||||| |||||||| | ||||||| |  |||||||||||||    
T  49139925 aaaaaactaacggagattaccaaaatagtaaactgcggaagatttatgagaccaaattgagacactttatagttatgggaccaaaacgaaaaccaaaaat 49139826  T
Q  254 aa 255  Q
    ||    
T  49139825 aa 49139824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 14765087 - 14765158
Alignment:
Q  156 aaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||||||||||  ||||||||||| ||| || ||||||||||||||||||| ||| || |||||    
T  14765087 aaatactaacggagaggaccgaaatagtaaactgcaaaaaatttatgggaccaaattgacacacttaatagt 14765158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 40811314 - 40811247
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||| ||| |||||| ||||||||| |||| |||||||| ||||||||||||||| |||||    
T  40811314 actaacggagatgaccaaaataataaacggcaaaagagttatgggatcaaattgagacatttaatagt 40811247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 2971873 - 2971751
Alignment:
Q  106 ttgatcgtcaatcttaaatgacacgtggaaaagag-ttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatggg 204  Q
    ||||||| ||||||||||||||||||||| ||| | ||||||  ||||| |||| | ||||  ||||||||| | |||||||| |   || | |||||||    
T  2971873 ttgatcgccaatcttaaatgacacgtggacaaggggttaacaatttttgaaaaaaattaacaaagaggactacattagtaaacagaggaaaaattatggg 2971774  T
Q  205 accaaattgagacattttatagt 227  Q
    |||||||||||||| ||||||||    
T  2971773 accaaattgagacactttatagt 2971751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 255
Target Start/End: Complemental strand, 48467439 - 48467284
Alignment:
Q  88 cttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaac 187  Q
    |||||| ||||| ||||| | ||| |||||||||||||||| |||||||||||||||||||||           ||||||||| ||| |||| ||| ||     
T  48467439 ctttttaaattc-aaccgctcatcatcaatcttaaatgacatgtggaaaagagttaacagatt-----------taacggagatgaccaaaacagt-aat 48467353  T
Q  188 ggcataagatttatgggaccaaattgagacattttatagtcaggg-accatattgaaaaccaaaaataa 255  Q
    | ||||||||||| | ||||||||||| ||| |||||||| |||| |||| ||||||||| ||||||||    
T  48467352 gacataagatttaagagaccaaattgaaacactttatagttagggaaccaaattgaaaacaaaaaataa 48467284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 26055021 - 26054920
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||| ||  ||| ||||||||||||| || ||||||||||| |||||||||| ||| |||||||| | ||||||| | ||||| ||||||||    
T  26055021 aaaaaactaacgaaggagaccaaaatagtaaacgacagaagatttatggaaccaaattgaaacactttatagttaggggaccaaaatgaaatccaaaaat 26054922  T
Q  254 aa 255  Q
    ||    
T  26054921 aa 26054920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 50679813 - 50679914
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||| | | ||||||||||   |||| ||||||||||||||||||||| ||||||| | |||||||| | | ||||| ||||||    
T  50679813 aaaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaagggaccaaaataaaaactaaaaat 50679912  T
Q  254 aa 255  Q
    ||    
T  50679913 aa 50679914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 35684129 - 35684261
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacg 188  Q
    ||||||| |||| || ||||||  ||||||||||||||| ||||| ||| ||||||   ||||| ||| | ||||||||||||||| |||| ||  ||||    
T  35684129 tttttaaatctagcccttgatctccaatcttaaatgacatgtggacaagggttaactatttttgaaaacaaactaacggagaggaccaaaagaggtaacg 35684228  T
Q  189 gcataagatttatgggaccaaattgagacattt 221  Q
     || ||||  || ||||||||||||||||||||    
T  35684229 acagaagacataagggaccaaattgagacattt 35684261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 48935052 - 48935179
Alignment:
Q  106 ttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacggcataagatttatggg 204  Q
    |||||| |||||||||||||| | ||||| ||| ||||||   ||||| ||| | ||||||||||| ||| |||| ||  ||||||| ||||  || |||    
T  48935052 ttgatcatcaatcttaaatgatatgtggacaagggttaactatttttgaaaacaaactaacggagatgaccaaaagaggtaacggcagaagacataaggg 48935151  T
Q  205 accaaattgagacattttatagtcaggg 232  Q
    |||||||||||||| |||||||| ||||    
T  48935152 accaaattgagacactttatagttaggg 48935179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 22167898 - 22167844
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    |||||| ||||| || |||||| ||||||||| ||||||||||||||||||||||    
T  22167898 actaacagagagaaccaaaataataaacggcagaagatttatgggaccaaattga 22167844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 19464719 - 19464654
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||| ||||| ||| |||||||||||||||| ||||||| ||| |||||||||| ||| ||||||    
T  19464719 actaatggagatgaccaaaatagtaaacggcagaagatttgtggaaccaaattgaaacactttata 19464654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 49141493 - 49141590
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||| ||||||||| |||||||||| || | |||||||||||| |||| ||| || |||| | ||||| |  | |||||||||||||||||    
T  49141493 actaacggagatgactaaaatggtaaacggcagaaaaattatgggaccaatttgaaacacttaatagttaagggatcgaagtgaaaaccaaaaataaa 49141590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 9592341 - 9592285
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||| || ||||||||||||| |||||||| ||| |||||||| ||||    
T  9592341 aaaatagtaaacgacaaaagatttatgggatcaaattgaaacactttatagttaggg 9592285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 9633894 - 9633798
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||  ||||  ||||||||   |||||||||   |||||||||||||| ||||||| | |||||||| | ||||||||||||||||    
T  9633894 actaacggagaggatcaaaactgtaaacggttgaagatttatataaccaaattgagacactttatagttaagggaccaaaatgaaaaccaaaaataa 9633798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 35683172 - 35683102
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||| |||| ||  ||||||| ||||  || ||||||||||||||||| |||||||| ||||    
T  35683172 taacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggg 35683102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 14171281 - 14171330
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||||||||| | || | |||||||||||||||||||| ||||||||||    
T  14171281 aaaatagtaaatgacagatgatttatgggaccaaattgaaacattttata 14171330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 2237975 - 2238071
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||| ||  |||| || ||||  || ||||||||||||||||| |||||||| | ||||||| | ||||| || |||||||    
T  2237975 actaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttatgggaccaaaatgaaatccgaaaataa 2238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 52742973 - 52743045
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||||| | || |||||||| ||||| |  || |||||||| |||||||| |||||||| ||||    
T  52742973 actaacggagaggaccataacagtaaacgacataaaacctaagggaccaatttgagacactttatagttaggg 52743045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 43 - 255
Target Start/End: Complemental strand, 31624141 - 31623929
Alignment:
Q  43 aataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagtt 142  Q
    ||||| ||||||||||||||||  ||| |  || ||  |||||| |||| ||||| | ||||||||||| |||||||||| ||||||||||||| |||||    
T  31624141 aataaaaattatcatatgttgtaagtctacagtatgccatgtgtgctttattaatcc-aaccgttgatcatcaatcttaagtgacacgtggaaaggagtt 31624043  T
Q  143 aacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattg 241  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||| | ||||||| ||||    
T  31624042 aacagattttgcaacatagtaacggagaggactaaaataataaacgacataagatttatgggaccaaattgaaacactttatagttaggggaccaaattg 31623943  T
Q  242 aaaaccaaaaataa 255  Q
    ||||||||||||||    
T  31623942 aaaaccaaaaataa 31623929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 51 - 255
Target Start/End: Complemental strand, 43275977 - 43275773
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    |||| |||||||||| ||||| ||| ||| |||||| ||| || ||| |||||||||||||  |||| |||||||||||||||||| |||||||||||||    
T  43275977 ttataatatgttgtgagtccatggtatgtcatgtgtgcttcttaaat-ctaaccgttgatcaccaattttaaatgacacgtggaaatgagttaacagatt 43275879  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg-accatattgaaaaccaa 249  Q
    || |||||||||||||| |||||| |||||| |||||||||||||| ||||||||| ||||||||||| |||||||| |||| |||| ||||||||| ||    
T  43275878 tttcaaaatactaacggtgaggaccaaaataataaacggcataagagttatgggactaaattgagacactttatagttagggaaccaaattgaaaacaaa 43275779  T
Q  250 aaataa 255  Q
    ||||||    
T  43275778 aaataa 43275773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 31625326 - 31625477
Alignment:
Q  105 gttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatggg 204  Q
    ||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  31625326 gttgatcatcaattttaaatgacacatggaaaatagttaacagattttgcaaaataataacggagaggaccaaaatagtaaacggcaaaagatttatggg 31625425  T
Q  205 accaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||| |||||| | | ||||||| ||||||||||||||||||    
T  31625426 accaaattgagacactttataattaggggaccaaattgaaaaccaaaaataa 31625477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 51 - 256
Target Start/End: Original strand, 41867804 - 41868010
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||| |||||||||  ||||  || || |||||||  |||||||| || |||||||||||   |||||||| ||||| ||||||||||||||||| |||    
T  41867804 ttatcctatgttgtgaatccactgtatgcaatgtgtgtttttttaaatccaaccgttgatcactaatcttaactgacatgtggaaaagagttaacaaatt 41867903  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||| | ||||||| | ||||||| ||    
T  41867904 ttgcaaaatactaacggagaggactaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaactaa 41868003  T
Q  250 aaataaa 256  Q
    |||||||    
T  41868004 aaataaa 41868010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 251
Target Start/End: Complemental strand, 38590047 - 38589847
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||| ||| ||  |||||| |||||| ||||| |||||||||||  |||||||||||||||||||  ||||||||||||||||    
T  38590047 ttatcatatgttgtgagtccacggtatgccatgtgtgctttttaaattc-aaccgttgatcaccaatcttaaatgacacgtgacaaagagttaacagatt 38589949  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaa 249  Q
    ||||||||||| |||| ||| ||  ||||||||||||| |||||||||||||||||||||||||| || |||||||| || |||||| ||||||||| ||    
T  38589948 ttgcaaaatacaaacgaagatgatcaaaatagtaaacgacataagatttatgggaccaaattgagccactttatagttagaggaccaaattgaaaacaaa 38589849  T
Q  250 aa 251  Q
    ||    
T  38589848 aa 38589847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 27750510 - 27750714
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||| ||| ||| |||||| |||||| ||| | |||||||||||  ||||||||| ||||||||| ||| || ||||||||||    
T  27750510 ttatcatatgttgtgagtccacggtatgtcatgtgtgctttttaaatcc-aaccgttgatcaccaatcttaactgacacgtgaaaatgaattaacagatt 27750608  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttat-agtcagggaccatattgaaaaccaa 249  Q
    |||||||||||||||||||| ||| ||||||||||||   |||||||||||||||||||||||||| | ||||| | | | ||| || ||||||||||||    
T  27750609 ttgcaaaatactaacggagaagaccaaaatagtaaacaatataagatttatgggaccaaattgagatactttataattaacggatcaaattgaaaaccaa 27750708  T
Q  250 aaataa 255  Q
    ||||||    
T  27750709 aaataa 27750714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 88 - 255
Target Start/End: Original strand, 38590938 - 38591100
Alignment:
Q  88 cttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaac 187  Q
    |||||| ||||| ||| |||||||  |||||||||||||||||||  ||||||||||||||||||||||||||     ||||||||| ||||||||||||    
T  38590938 ctttttaaattc-aactgttgatcaccaatcttaaatgacacgtgacaaagagttaacagattttgcaaaata-----ggagaggaccaaaatagtaaac 38591031  T
Q  188 ggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||| |||||||| |||||||||    
T  38591032 ggcataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataa 38591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 43277840 - 43277990
Alignment:
Q  81 atgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaat 180  Q
    |||||| |||||| ||||| ||||||||||| |||||||||||||| || |||||| ||||||||||||| | ||||||||| ||||| | ||| |||||    
T  43277840 atgtgtgctttttaaattc-aaccgttgatcatcaatcttaaatgaaacatggaaatgagttaacagattctacaaaatactgacggacatgaccaaaat 43277938  T
Q  181 agtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  43277939 agtaaacggcataagatttacgggaccaaattgagacattttatagttaggg 43277990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 255
Target Start/End: Original strand, 1570133 - 1570299
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| | |||||||||||| |||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  1570133 tttttaaatttaaccgttgatcatcaatcttgaaggacatgtggaaaggagttaacagattttgcaaaatactaacggagatgaccaaaatagtaaacgg 1570232  T
Q  190 cataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||| |||||   ||||||||||||||| |||||||| | | ||||| ||||||||  ||||||||    
T  1570233 cataaaatttaatagaccaaattgagacactttatagttatgagaccaaattgaaaatgaaaaataa 1570299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 3237644 - 3237464
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||   |||||| |||||| |||||| ||| | ||| |||||||  ||||||||| ||||||||||||| |||||||||||||    
T  3237644 ttatcatatgttgtgagtcccctgtttgtcatgtgtgctttttaaatcc-aactgttgatcaccaatcttaactgacacgtggaaatgagttaacagatt 3237546  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||||||||||||||| | ||  ||||| |||||||||| || ||||||||||||||||||||||| |||| ||| ||||    
T  3237545 ttgcaaaatactaacggaaatgatcaaaattgtaaacggcagaatatttatgggaccaaattgagacagtttaaagttaggg 3237464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 91 - 255
Target Start/End: Complemental strand, 4807554 - 4807389
Alignment:
Q  91 ttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggc 190  Q
    |||||| || |||||||||||  |||||| |||||||| ||||||| ||||||| ||||||||||||||| |||||||||| || |||||| ||||||||    
T  4807554 ttttaaatccaaccgttgatcaccaatctcaaatgacatgtggaaatgagttaatagattttgcaaaatagtaacggagagaaccaaaataataaacggc 4807455  T
Q  191 ataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
     ||||||||||||||||||||||| | |  ||||||| | ||||||| ||| |||| |||||||||    
T  4807454 gtaagatttatgggaccaaattgaaaaacgttatagttaggggaccaaattaaaaatcaaaaataa 4807389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 255
Target Start/End: Complemental strand, 41867047 - 41866917
Alignment:
Q  126 acacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||| ||| ||| ||||||||||||||||||| ||| ||||||    
T  41867047 acacgtggaaaggagttaacagattttgcaaaatactaacagagatgaccaaaatagtaaatggcgtaaaatttatgggaccaaattgaaacactttata 41866948  T
Q  226 g-tcagggaccatattgaaaaccaaaaataa 255  Q
    | | ||||| || | |||||| |||||||||    
T  41866947 gttaagggatcaaagtgaaaatcaaaaataa 41866917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 36070297 - 36070200
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataaa 256  Q
    |||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||| | ||||||| |||||||||||||||||||    
T  36070297 actaacggggaggaccaaaatagtaaacggcagaagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataaa 36070200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 104 - 255
Target Start/End: Original strand, 45385735 - 45385887
Alignment:
Q  104 cgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaata-ctaacggagaggactaaaatagtaaacggcataagatttatg 202  Q
    |||||||| ||||||||||  |||||||||||  |||||||| |||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||     
T  45385735 cgttgatcatcaatcttaagggacacgtggaag-gagttaacggattttgcaaaaaatctaacggagaggactaaaatggtaaacgacataagatttata 45385833  T
Q  203 ggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||| |||||||| ||| |||||| | | ||||||| | ||||| ||||||||||    
T  45385834 ggatcaaattgaaacactttataattatgggaccaaaatgaaatccaaaaataa 45385887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 37275011 - 37274910
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||| || |||||| | ||||| ||||||||    
T  37275011 aaaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaacaaattgagacactttatagttagaggaccaaaatgaaatccaaaaat 37274912  T
Q  254 aa 255  Q
    ||    
T  37274911 aa 37274910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 35944027 - 35943930
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagaca-ttttat-agtcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| |||||| | | |||||||| | ||||||||||||||||    
T  35944027 actaacggagatgaccaaaatagtaaactgcataagatttatgggaccaaattgagacatttttataattaagggaccaaaatgaaaaccaaaaataa 35943930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 7486196 - 7486099
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||  || ||||||| | ||||| || | |||||||||||||||||    
T  7486196 actaacggagaggaccaaaatagtaaacagcaaaagatttatgggaccaaattgaagcactttatagttaagggatcaaaatgaaaaccaaaaataaa 7486099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 24068454 - 24068353
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||||||| ||| ||||||||||   |||| ||||||||||||||||||||| |||||||| | ||||||| | ||||||||||||||    
T  24068454 aaaaaactaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaat 24068355  T
Q  254 aa 255  Q
    ||    
T  24068354 aa 24068353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 16363809 - 16363905
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||||||||||| ||| | ||||||||||| |||||||||| | |||||||| || |||||| | ||||||||||||||||    
T  16363809 actaacggagaggaccaaaatagtaaacagcagacgatttatgggatcaaattgagatactttatagttagaggaccaaagtgaaaaccaaaaataa 16363905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 13367047 - 13367114
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||||    
T  13367047 actaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagt 13367114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 37276240 - 37276337
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataaa 256  Q
    |||||| |||||||| || ||| ||||||||| |||||||||||||||||||||||||| ||||||| | ||||| || | |||||| ||||||||||    
T  37276240 actaacagagaggaccaatataataaacggcaaaagatttatgggaccaaattgagacactttatagttaagggatcaaagtgaaaatcaaaaataaa 37276337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 117167 - 117071
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||| | |||||| || ||||||||||||| |||||||| |||||||||| | | ||||||| | ||||||||||||||||    
T  117167 actaacggagaggaccaaaacaataaacgacagaagatttatgggatcaaattgaaacattttataattaggggaccaaaatgaaaaccaaaaataa 117071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 24069447 - 24069539
Alignment:
Q  164 acggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||| ||||| |||||||||| |||| ||||||||||||||||||||| ||||||| | ||||| || | ||||||||||||||||    
T  24069447 acggaaaggaccaaaatggtaaacggcagaagagttatgggaccaaattgagacactttatagttaagggatcaaaatgaaaaccaaaaataa 24069539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 36756183 - 36756087
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||| ||||| ||||| ||| |||||||| | ||||||| ||| ||||| ||||||||    
T  36756183 actaacggagatgaccaaaatagtaaacgacataagatttatgtgaccagattgaaacactttatagttatgggaccaaattaaaaactaaaaataa 36756087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 37323434 - 37323370
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatagtcaggg-accatattgaaaaccaaaaataaa 256  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||||||    
T  37323434 aagatttatgggatcaaattgagacattttatagttagggaaccaaattgaaaaccaaaaataaa 37323370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 4810125 - 4810216
Alignment:
Q  164 acggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||| ||| ||||||||||| | |||||||||||||| |  |||||||||||||||||| | | |||||| ||| ||||||||||||||    
T  4810125 acggagatgaccaaaatagtaaatgacataagatttatggaattaaattgagacattttataattaaggaccaaattaaaaaccaaaaataa 4810216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 29739643 - 29739737
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataaa 256  Q
    |||||| | ||| ||||| |||||||| | || ||||||||||||||||||||||| |||||||| | |||| || |||||||||||||||||||    
T  29739643 aacggacatgaccaaaatggtaaacggaagaaaatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataaa 29739737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 36940032 - 36940126
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| ||| |||||||||||||||| ||||||||||  |||||||||| ||| |||||||| | |||| || | ||||||||||||||||    
T  36940032 taacggagatgaccaaaatagtaaacggcagaagatttatgataccaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataa 36940126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 37472512 - 37472426
Alignment:
Q  170 aggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||| ||||||| || |||| ||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||||||    
T  37472512 aggaccaaaatggtaaacgacaaaagacttatgggaccaaattgagacactttatagttagaggaccaaattaaaaaccaaaaataa 37472426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 39546674 - 39546747
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggga 233  Q
    ||||||||||| ||| ||||  ||||||||||||| ||||||||||||||||||||||| |||| ||| |||||    
T  39546674 actaacggagatgaccaaaacggtaaacggcataatatttatgggaccaaattgagacactttaaagttaggga 39546747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 19913611 - 19913515
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| |||||  ||||| ||| |||| ||||||||||||||||| ||| |||||||| || |||||| |||||||  |||||||||    
T  19913611 actaacggagaggaccaaaatgataaaccgcagaagacttatgggaccaaattgaaacactttatagttagaggaccaaattgaaattcaaaaataa 19913515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 14820744 - 14820673
Alignment:
Q  115 aatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaa 186  Q
    |||||||||||||||||||||| ||||||||| ||| || ||||||||||  |||||||| |||||| ||||    
T  14820744 aatcttaaatgacacgtggaaatgagttaacaaattatgtaaaatactaagagagaggaccaaaataataaa 14820673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 43386732 - 43386795
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||||||||||||||||||||||||| | ||||||| | ||||||||||||||||    
T  43386732 aagagttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataa 43386795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 14820294 - 14820216
Alignment:
Q  178 aatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||| ||||||||||||||||| ||||||||||| |||||||| | ||||||| ||| ||| ||||||||||    
T  14820294 aataataaacgacataagatttatgggactaaattgagacactttatagttaggggaccaaattaaaatccaaaaataa 14820216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 37324687 - 37324781
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||| |  ||||||||||| ||   ||||||| || |||||||||||||||||||||||| | ||||||| ||| ||||||||||||||    
T  37324687 taacggagagaaacaaaatagtaaatggtcgaagatttttgagaccaaattgagacattttatagttaggggaccaaattaaaaaccaaaaataa 37324781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 19914906 - 19914999
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||| | ||| ||||| |||||||| | ||||||||||||  |||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  19914906 aacggatatgaccaaaatggtaaacggtagaagatttatgggtacaaattgagacactttatagttaagggaccaaattgaaaacccaaaataa 19914999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 35945445 - 35945530
Alignment:
Q  171 ggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||||||| ||| ||||| |||||||||||| ||||||||||||||| | |||||| | | ||||||| ||||||||    
T  35945445 ggaccaaaatagtaaactgcagaagatatatgggaccaaagtgagacattttatagttaagggactaaaatgaaaacaaaaaataa 35945530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 44606258 - 44606162
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||||||  |||||| ||||| | | |||||||||||||||||||||| ||| | |||||| | ||||||| | ||||||||||||||||    
T  44606258 actaatggagaggatcaaaataataaacagaagaagatttatgggaccaaattgaaacactatatagttaggggaccaaagtgaaaaccaaaaataa 44606162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 8095465 - 8095398
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||| ||||| ||||||||||||| || |||| | ||||||||||||||||||| || |||||    
T  8095465 actaacggaaaggaccaaaatagtaaacgacaaaagagtaatgggaccaaattgagacacttaatagt 8095398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 39515296 - 39515222
Alignment:
Q  182 gtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||| |||| |||| ||||| ||||||||||||||| |||||||||| |||| || | ||||||||||||||||    
T  39515296 gtaaatggcaaaagagttatgagaccaaattgagacactttatagtcaggggatcaaaatgaaaaccaaaaataa 39515222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 29738407 - 29738343
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||| ||||  |||||||||| |||| ||||| ||| ||||||||||| ||||||||    
T  29738407 aacggagaggaccaaaaaggtaaacggcagaagacttatgagactaaattgagacactttatagt 29738343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 36734566 - 36734637
Alignment:
Q  185 aacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaataa 255  Q
    ||||||| || |||||||||||||||||||||||  ||||||||||| ||||| | ||||||  ||||||||    
T  36734566 aacggcagaaaatttatgggaccaaattgagacacattatagtcaggcgaccaaagtgaaaatgaaaaataa 36734637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 41522689 - 41522752
Alignment:
Q  164 acggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||| |||||||||| ||||||||||| |||| |||| |||||||||||| ||| || |||||    
T  41522689 acggaaaggactaaaacagtaaacggcagaagacttataggaccaaattgacacacttaatagt 41522752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 2421298 - 2421344
Alignment:
Q  168 agaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    ||||||| |||||| ||||||||| ||||||| ||||||||||||||    
T  2421298 agaggaccaaaataataaacggcagaagatttctgggaccaaattga 2421344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 8395114 - 8395064
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaa 210  Q
    ||||||||||||||| ||||| |||||||| | |||| |||||||||||||    
T  8395114 actaacggagaggaccaaaatggtaaacggaagaagaattatgggaccaaa 8395064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 10053743 - 10053837
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||| || |||| ||  |||| |||||||  || |||||||| |||||||| |||||||| | ||||||| | ||||||||||||||||    
T  10053743 taacggagagaaccaaaagaggtaacgacataagacataagggaccaacttgagacactttatagttaagggaccaaagtgaaaaccaaaaataa 10053837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 34616215 - 34616181
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||||||||||||||||| ||||||||    
T  34616215 aagatttatgggaccaaattgagacactttatagt 34616181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 8096546 - 8096599
Alignment:
Q  164 acggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagac 217  Q
    ||||||||||| |||||||||||||| | |||| ||||| ||||||||| ||||    
T  8096546 acggagaggaccaaaatagtaaacggtaaaagagttatgagaccaaattaagac 8096599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 21267240 - 21267187
Alignment:
Q  203 ggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||||| |||||||| || |||||| | ||||||||||||||||    
T  21267240 ggaccaaattgagacactttatagttagaggaccaaagtgaaaaccaaaaataa 21267187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 37474076 - 37474129
Alignment:
Q  203 ggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||||| ||||||| | |||||||| ||||||||||| ||||||    
T  37474076 ggaccaaattgagacactttatagttaagggaccaaattgaaaaccataaataa 37474129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 38104 - 38032
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||||||| | ||||||||||||   |||| ||||| ||||||||| | ||| |||||||| ||||    
T  38104 actaacggagaggaccacaatagtaaacggaggaagacttatgagaccaaattcaaacactttatagttaggg 38032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 36938798 - 36938750
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaa 210  Q
    |||| |||| ||| |||||||||||||||| |||||||||| |||||||    
T  36938798 taacagagaagaccaaaatagtaaacggcagaagatttatgagaccaaa 36938750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 404 - 608
Alignment:
Q  51 ttatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagatt 150  Q
    ||||||||||||||| ||||| ||| ||  |||||| |||| | ||| | ||||||| ||| |||||||||| |||||| ||||||  ||||||||||||    
T  404 ttatcatatgttgtgagtccacggtatgccatgtgtgctttataaatcc-aaccgttcatcatcaatcttaagtgacacatggaaagaagttaacagatt 502  T
Q  151 ttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaa 249  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||||| | ||||||  ||||||||||||    
T  503 tttcaaaatactaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttaggggacctaattgaaaaccaa 602  T
Q  250 aaataa 255  Q
    ||||||    
T  603 aaataa 608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 115 - 255
Target Start/End: Original strand, 8412268 - 8412409
Alignment:
Q  115 aatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  8412268 aatcttaaatgacatgtggaaaggagttaacagattttgcaaaatactaacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattga 8412367  T
Q  215 gacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||| | ||||| | ||||||||| ||||||||    
T  8412368 gacactttatagttaggggactaaattgaaaacaaaaaataa 8412409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 101 - 255
Target Start/End: Complemental strand, 8411264 - 8411109
Alignment:
Q  101 aaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagattta 200  Q
    |||||||||||   |||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  8411264 aaccgttgatcacaaatcttaaatgacatgtggaaaggagttaacaaattttgcaaaatattaacggagaggaccaaaatagtaaacggcataagattta 8411165  T
Q  201 tgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |  ||||||||||||||| |||||||| | ||||| | ||||||||||||||||||    
T  8411164 taagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataa 8411109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 22299902 - 22299996
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||||||| | ||||||||||||||||    
T  22299902 taacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataa 22299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 31740272 - 31740365
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||| ||||||||    
T  31740272 aacggataggaccaaaatggtaaacggcataagatttatgggaccaaattgagacactttatagttaagggaccaaattgaaaacaaaaaataa 31740365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 31738482 - 31738386
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| ||||| |||||| ||| |||| ||||||||||||||||| ||| |||||||| | ||||||| ||||||||||||||||||    
T  31738482 actaacggagaggaccaaaatggtaaaccgcagaagacttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataa 31738386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 5311388 - 5311302
Alignment:
Q  170 aggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||| | ||||| | ||||||||||||||||||    
T  5311388 aggaccaaaatagtaaacgacataagatttataggaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataa 5311302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 27440174 - 27440235
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacatttta 223  Q
    ||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||||    
T  27440174 taacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaattta 27440235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 33807806 - 33807712
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||| ||||  |||||||||| || |||||||| | |||||||||||| ||||||| | |||||||| | ||||||||||||||||    
T  33807806 taacggagaggaccaaaacggtaaacggcagaaaatttatggcatcaaattgagacactttatagttaagggaccaaagtgaaaaccaaaaataa 33807712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 27438907 - 27438813
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| ||| |||| ||||||||||| || |||||||||| |||||||||||| ||||||| | | |||||| | ||||| ||||||||||    
T  27438907 taacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataa 27438813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 33802014 - 33802110
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| || |  ||||||  || ||||||||||||| |||||| ||||| |||||||| | ||||||| | ||||||||||||||||    
T  33802014 actaacggagaggaccaatacggtaaactacagaagatttatgggatcaaattaagacactttatagttaggggaccaaagtgaaaaccaaaaataa 33802110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 19368452 - 19368611
Alignment:
Q  98 tctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacggcataaga 196  Q
    ||||||| ||||||  |||||||||||| |||||| | ||| ||||||   ||||| ||| | |||||||||||||||||||| ||  |||| || ||||    
T  19368452 tctaacccttgatcaccaatcttaaatggcacgtgaacaagggttaactatttttgaaaacaaactaacggagaggactaaaagaggtaacgacagaaga 19368551  T
Q  197 tttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
      || | ||||||||||||||| |||||||| || |||||| | ||||| || |||||||    
T  19368552 cataagagaccaaattgagacactttatagttagaggaccaaaatgaaatccgaaaataa 19368611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 14328773 - 14328838
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||| ||||||||||||| || |||| ||||| ||||||||| ||||| || |||||    
T  14328773 taacggagaggaccaaaatagtaaacgacaaaagaattatgagaccaaattaagacacttaatagt 14328838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 14421783 - 14421848
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||| ||||||||||||| || |||| ||||| ||||||||| ||||| || |||||    
T  14421783 taacggagaggaccaaaatagtaaacgacaaaagaattatgagaccaaattaagacacttaatagt 14421848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 293640 - 293702
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    |||||||||||| ||||| ||||||| || |||| ||||| ||||||||||| ||| ||||||    
T  293640 aacggagaggaccaaaatggtaaacgacagaagacttatgagaccaaattgaaacactttata 293702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 34084148 - 34084225
Alignment:
Q  177 aaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaataa 255  Q
    |||| ||||||| || |||||||||| ||||||||||||||| |||||| | | |||||| | ||||||||| ||||||    
T  34084148 aaatggtaaacgacagaagatttatgagaccaaattgagacactttatattta-ggaccaaagtgaaaaccagaaataa 34084225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 37 - 255
Target Start/End: Complemental strand, 42027434 - 42027216
Alignment:
Q  37 aataataataataattatcatatgttgtgcgtccagggtttgtaatgtgtacttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaa 136  Q
    ||||||||||| ||| ||||||||||| | |||||   | ||| |||||| |||||| ||| | |||||||||||   |||||||| ||||| |||||||    
T  42027434 aataataataagaatgatcatatgttgggagtccacattatgtcatgtgtgctttttaaatcc-aaccgttgatcaagaatcttaactgacatgtggaaa 42027336  T
Q  137 agagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcag-ggacc 235  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||| || ||||||||||||||||||||||||||| |||| || |||||    
T  42027335 agagttaacagattttgcaaaatactaacggaaaggaccaaagtagtaaacagcagaaaatttatgggaccaaattgagacattttgtagttagaggacc 42027236  T
Q  236 atattgaaaaccaaaaataa 255  Q
    | | |||||| |||||||||    
T  42027235 aaaatgaaaatcaaaaataa 42027216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 146 - 255
Target Start/End: Complemental strand, 2581936 - 2581826
Alignment:
Q  146 agattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaa 244  Q
    ||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||||| | |||| || |||||||    
T  2581936 agattttgcaaaatactaacggagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaa 2581837  T
Q  245 accaaaaataa 255  Q
    |||||||||||    
T  2581836 accaaaaataa 2581826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 232
Target Start/End: Complemental strand, 15650629 - 15650488
Alignment:
Q  91 ttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggc 190  Q
    |||||| ||||||  ||||||  ||||||| || |||| ||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||||||||| |    
T  15650629 ttttaaatctaactattgatcaccaatcttgaaggacatgtggaaaggagttaacaaattttgcaaaatactaacggagatgaccaaaatagtaaacgac 15650530  T
Q  191 ataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||||||| |  |||||||||||||| |||||||| ||||    
T  15650529 ataagatttaagataccaaattgagacactttatagttaggg 15650488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 42028920 - 42029050
Alignment:
Q  125 gacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttat 224  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| || || |||| |||||||||||||| |||||| |||||    
T  42028920 gacatgtggaaaggagttaacagattttgcaaaatactaacggagaagaccaaaatagtaagcgacagaagaattatgggaccaaatcgagacactttat 42029019  T
Q  225 agtcag-ggaccatattgaaaaccaaaaata 254  Q
    ||| ||  ||||| | |||||||||||||||    
T  42029020 agttagatgaccaaaatgaaaaccaaaaata 42029050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 23177793 - 23177695
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca--gggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| |||||||| |  ||||||| | |||||||||||||||||    
T  23177793 actaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaataaa 23177695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 23589050 - 23588952
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca--gggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| |||||||| |  ||||||| | |||||||||||||||||    
T  23589050 actaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaataaa 23588952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 1624911 - 1625068
Alignment:
Q  98 tctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagat 197  Q
    ||||||| ||||||   |||||||||||||| ||||| ||  ||||| |  ||||| |||| | ||||||||| ||| ||||||||||| ||||||||||    
T  1624911 tctaaccattgatcacaaatcttaaatgacatgtggacaaaggttaataatttttgaaaaaaattaacggagaagaccaaaatagtaaatggcataagat 1625010  T
Q  198 ttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||||||||||| |||||||| || || || | ||||| ||||||||||    
T  1625011 ttataggaccaaattgagacactttatagttagagatcaaaatgaaatccaaaaataa 1625068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 6707050 - 6706949
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| |||||||||| |||| |||||||||||||| | ||||||||||| |||||||||||||| |||||||| | ||||||| | ||||| ||||||||    
T  6707050 aaaaaactaacggaggggaccaaaatagtaaacggaagaagatttatggaaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaat 6706951  T
Q  254 aa 255  Q
    ||    
T  6706950 aa 6706949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 255
Target Start/End: Original strand, 2583535 - 2583639
Alignment:
Q  152 tgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaa 250  Q
    |||||||||||||| |||||||| || ||||||||| |  ||||||||||| ||||||||||||||| |||||||| | ||||| | ||| |||||||||    
T  2583535 tgcaaaatactaacagagaggaccaagatagtaaacagtgtaagatttatgagaccaaattgagacactttatagttaggggacaaaattaaaaaccaaa 2583634  T
Q  251 aataa 255  Q
    |||||    
T  2583635 aataa 2583639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 4829584 - 4829488
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||| |||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||| | |||||| | | ||||||| ||||||||    
T  4829584 actaacagagaggaccaaaatagtaaacgacataagatttatgagatcaaattgagacattttatagttaagggactaaagtgaaaacgaaaaataa 4829488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 12853004 - 12852933
Alignment:
Q  161 ctaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||||||| ||| |||||||||||||  | |||||||||||||||||||||||||| |||||||| ||||    
T  12853004 ctaacggagatgaccaaaatagtaaacgatagaagatttatgggaccaaattgagacactttatagttaggg 12852933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 34039416 - 34039315
Alignment:
Q  126 acacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||| ||| ||||||| || || |  |||| ||||| ||||||||| ||| | ||||||    
T  34039416 acacgtggaaaggagttaatagattttgcaaaatactaatggagaagaccaaaatagcaagcgaccgaagaattatgagaccaaattaagatactttata 34039317  T
Q  226 gt 227  Q
    ||    
T  34039316 gt 34039315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 2305706 - 2305587
Alignment:
Q  114 caatcttaaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaatt 212  Q
    ||||||||||||||| ||||| ||| ||||||   ||||| ||| | ||||||||||||||| |||| ||  ||||||| ||||  || |||||||||||    
T  2305706 caatcttaaatgacatgtggacaagggttaactatttttgaaaacaaactaacggagaggaccaaaagaggtaacggcagaagacataagggaccaaatt 2305607  T
Q  213 gagacattttatagtcaggg 232  Q
    |||||| |||||||| ||||    
T  2305606 gagacactttatagttaggg 2305587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 255
Target Start/End: Original strand, 6208992 - 6209157
Alignment:
Q  90 tttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacgg 189  Q
    ||||||| ||||||| ||||||  ||||||||||||||| ||||| ||  | | |   |||||  |||| ||||||| ||| ||| |||||||||||||     
T  6208992 tttttaaatctaacccttgatcaccaatcttaaatgacatgtggacaattggttaattatttttgaaaaaactaacgaagaagaccaaaatagtaaacga 6209091  T
Q  190 cataagatttatgggaccaaattgagacattttatagtcag-ggaccatattgaaaaccaaaaataa 255  Q
    || |||| ||||||||||||||| ||||| |||||||| ||  ||||| | ||||| ||||||||||    
T  6209092 ca-aagaattatgggaccaaattaagacactttatagttagatgaccaaaatgaaatccaaaaataa 6209157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 227
Target Start/End: Complemental strand, 41312682 - 41312552
Alignment:
Q  98 tctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaa-atactaacggagaggactaaaatagtaaacggcataaga 196  Q
    ||||||| ||||||  ||||||||||||||| ||||| ||| ||||||   ||||| ||| | ||||||||||||||| |||| ||  ||||||||||||    
T  41312682 tctaacccttgatcaccaatcttaaatgacatgtggacaagggttaactatttttgaaaacaaactaacggagaggaccaaaagaggtaacggcataaga 41312583  T
Q  197 tttatgggaccaaattgagacattttatagt 227  Q
      || | ||||||||||||| | ||||||||    
T  41312582 cataagagaccaaattgagatactttatagt 41312552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 7490192 - 7490257
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||||||| | ||| ||||||||||||   | |||||||||||||||||||||||||||||||||    
T  7490192 actaacggataagaccaaaatagtaaacaataaaagatttatgggaccaaattgagacattttata 7490257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 14509326 - 14509261
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||| |||| | ||| ||||||||    
T  14509326 taacggagaggaccaaaatagtaaacgacagaagatttatgggaccgaattaaaacactttatagt 14509261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 14510508 - 14510573
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||| ||| |||||||||||||||||||| |||| |||| |||||||||||||||| || |||||    
T  14510508 taacgaagatgactaaaatagtaaacggcagaagagttataggaccaaattgagacacttaatagt 14510573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 255
Target Start/End: Complemental strand, 35799630 - 35799535
Alignment:
Q  161 ctaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||| |||   |||||||| | || | ||||| ||||||||||||||| |||||||| | ||||| | ||||||||||||||||||    
T  35799630 ctaacggagaggaccaaagaggtaaacggaagaaaagttatgagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataa 35799535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 40174756 - 40174815
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    |||| ||||||||||| ||| ||||||||||||  || ||||||||||||||||||||||    
T  40174756 aaaaaactaacggagatgaccaaaatagtaaacaacagaagatttatgggaccaaattga 40174815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 7037082 - 7036989
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||| | ||| ||||| |||||||||| |||| ||||||||||||||||| ||| ||||||| | |||||| | | ||||| ||||||||||    
T  7037082 aacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgaaacactttatagttaagggactaaagtgaaatccaaaaataa 7036989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 10367355 - 10367262
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||||| ||||||||  |||||||||| |||| ||||| ||| ||||||||||| ||||||| | ||  |||| |||||||| |||||||||    
T  10367355 aacggagacgactaaaaaggtaaacggcagaagacttatgagactaaattgagacactttatagttaagaaaccaaattgaaaatcaaaaataa 10367262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 12959705 - 12959798
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||  ||||  |||||||||| ||||||||| |||| ||||||||||| ||||| | | |||||||| ||| |||| |||||||||    
T  12959705 aacggagaggatcaaaaaggtaaacggcagaagatttatcggactaaattgagacactttattgttaagggaccaaattaaaaatcaaaaataa 12959798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 23178874 - 23178975
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||| ||| |||||| |||||| |  ||||||||||||||||| || | ||| |||||||| | ||||||| | ||||||| ||||||    
T  23178874 aaaaaactaacggagatgaccaaaataataaacgactgaagatttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaat 23178973  T
Q  254 aa 255  Q
    ||    
T  23178974 aa 23178975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 23590131 - 23590232
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||| ||| |||||| |||||| |  ||||||||||||||||| || | ||| |||||||| | ||||||| | ||||||| ||||||    
T  23590131 aaaaaactaacggagatgaccaaaataataaacgactgaagatttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaat 23590230  T
Q  254 aa 255  Q
    ||    
T  23590231 aa 23590232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 37869040 - 37869133
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||||| ||| ||||  ||||||| || |||| ||||| ||| ||||||||||| ||||||| | |||||||| |||||||| |||||||||    
T  37869040 aacggagaagaccaaaaaggtaaacgacagaagacttatgagactaaattgagacactttatagttaagggaccaaattgaaaatcaaaaataa 37869133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 12958499 - 12958439
Alignment:
Q  196 atttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||||| |||||||| | |||| || ||| ||||||||||||||    
T  12958499 atttatgggaccaaattgagacactttatagttaggggatcaaattaaaaaccaaaaataa 12958439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 21012077 - 21012149
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||| ||| ||||||||||||| |  |||||||  ||||||||||||| ||| |||||||| ||||    
T  21012077 actaacggagatgaccaaaatagtaaacgacggaagatttgagggaccaaattgaaacactttatagttaggg 21012149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 37867839 - 37867779
Alignment:
Q  196 atttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||||||||||||| |||||||| | |||| || ||||||||||||||||||    
T  37867839 atttgtgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataa 37867779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 42246721 - 42246645
Alignment:
Q  149 ttttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||| |||| ||||||| | ||||| |||||||||||||| | |||| |||||||| |||||||| ||| ||||||    
T  42246721 ttttgaaaaaaactaacgaaaaggaccaaaatagtaaacggtaaaagagttatgggatcaaattgaaacactttata 42246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 12854134 - 12854197
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||||||||||||||| ||||||| | |||||||| | ||||| | ||||||||    
T  12854134 aagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatctaaaaataa 12854197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 32614501 - 32614450
Alignment:
Q  163 aacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    |||||||||||||||||| ||||||| ||||||| |||||| || |||||||    
T  32614501 aacggagaggactaaaatggtaaacgacataagagttatggaactaaattga 32614450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 7038367 - 7038425
Alignment:
Q  198 ttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||||||| ||||||| | |||||||| | ||||| ||||||||||    
T  7038367 ttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataa 7038425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 10368405 - 10368479
Alignment:
Q  183 taaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataaa 256  Q
    ||||||| | || |||||||||| |||||||||||| |||||||| | |||| || |||||||| ||||||||||    
T  10368405 taaacggaagaaaatttatgggatcaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaa 10368479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 22653066 - 22653120
Alignment:
Q  202 gggaccaaattgagacattttatagtcaggg-accatattgaaaaccaaaaataa 255  Q
    ||||||||||||||||| |||| ||| |||| |||||||||||| ||||||||||    
T  22653066 gggaccaaattgagacagtttaaagttaggggaccatattgaaatccaaaaataa 22653120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 28109868 - 28109962
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||| ||||| ||||||  || || | ||||||||||||||||||| | ||||| || | | ||||| ||||||||| ||||||||    
T  28109868 taacggagaggaccaaaatggtaaactacagaaaagttatgggaccaaattgagatactttatcgttatgagaccaaattgaaaacgaaaaataa 28109962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 35801044 - 35801109
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    ||||||||||||| ||| | ||||| |||| |||| ||| ||||||||||||| ||| ||||||||    
T  35801044 taacggagaggaccaaagtggtaaatggcagaagagttaggggaccaaattgaaacactttatagt 35801109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 3533618 - 3533690
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagt 227  Q
    |||||||||||||| | ||   |||||||||||| || |||||||||| ||||||||||| ||| || |||||    
T  3533618 aaaatactaacggaaatgatcgaaatagtaaacgacaaaagatttatgagaccaaattgacacacttaatagt 3533690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 29424609 - 29424681
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    |||||| |||||||| |||| | ||||||||| || ||| | ||||||||||||| ||| |||||||| ||||    
T  29424609 actaacagagaggaccaaaacaataaacggcagaatattcaagggaccaaattgaaacactttatagttaggg 29424681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 256
Target Start/End: Original strand, 145797 - 145963
Alignment:
Q  89 ttttttaattctaaccgttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacg 188  Q
    |||||||| || ||| |||||||  |||| ||||| |||| |||| ||||  |||||| ||||| ||||||| ||||||||| ||| |||||||||||||    
T  145797 ttttttaaatccaactgttgatcaccaatattaaaagacatgtggcaaag--ttaacaaattttacaaaatattaacggagatgaccaaaatagtaaacg 145894  T
Q  189 gcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataaa 256  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||  | |||||||||||||||||||    
T  145895 gcataagatttattggaccaaattaagacattttatagttaggggattaaattgaaaaccaaaaataaa 145963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 255
Target Start/End: Original strand, 2202 - 2358
Alignment:
Q  101 aaccgttgatcgtcaatcttaaatgacacgtggaaaa-gagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagattt 199  Q
    |||| |||||| || ||||||| ||||||||||| || | ||||| || ||||| |||| ||||||||| ||||| |||||||||||| | | |||| ||    
T  2202 aacccttgatcatccatcttaagtgacacgtggataatgggttaatagtttttgaaaaaaactaacggaaaggaccaaaatagtaaacagtagaagagtt 2301  T
Q  200 atgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||||||||||||| ||| |||||| | | ||||||| | ||||||||||||||||    
T  2302 atgggaccaaattgaaacactttataattaggggaccaaaatgaaaaccaaaaataa 2358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 22244 - 22151
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| ||| ||||||||||||| || |||||||||| || ||||||||||||||||||||| || || || | |||||| |||||||||    
T  22244 taacggagatgaccaaaatagtaaacgacagaagatttatgtgaacaaattgagacattttatagttagagatcaaagtgaaaatcaaaaataa 22151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 39931 - 39994
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||||||||||||||||||||||||| |||||| | | ||||||| | ||||| ||||||||||    
T  39931 aagatttatgggaccaaattgagacactttatacttaggggaccaaagtgaaatccaaaaataa 39994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 47187 - 47126
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacatttta 223  Q
    ||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||||    
T  47187 taacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaattta 47126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 48455 - 48549
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatag-tcagggaccatattgaaaaccaaaaataa 255  Q
    ||||||||| ||| |||| ||||||||||| || |||||||||| |||||||||||| ||||||| | | |||||| | ||||| ||||||||||    
T  48455 taacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataa 48549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 625 - 697
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||| ||| ||||| |||||||||| |||||||||||||| ||||||||||| |||||||| ||||    
T  625 actaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggg 697  T

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Target: scaffold1878 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 649 - 577
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||| ||| ||||| |||||||||| |||||||||||||| ||||||||||| |||||||| ||||    
T  649 actaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggg 577  T

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Target: scaffold0290 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 9475 - 9547
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcaggg 232  Q
    ||||||||||| ||| ||||| |||||||||| |||||||||||||| ||||||||||| |||||||| ||||    
T  9475 actaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggg 9547  T

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Target: scaffold0290; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 8503 - 8402
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaat 253  Q
    |||| ||||||||||| |||  |||||||||| | |  ||||||||||||||||| |||||||| |||||||| | |||| || | ||||||||||||||    
T  8503 aaaaaactaacggagatgaccgaaatagtaaatgactgaagatttatgggaccaatttgagacagtttatagttaggggagcaaagtgaaaaccaaaaat 8404  T
Q  254 aa 255  Q
    ||    
T  8403 aa 8402  T

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Target: scaffold0122 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 16064 - 16019
Alignment:
Q  160 actaacggagaggactaaaatagtaaacggcataagatttatggga 205  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  16064 actaacggagaggactaaaatagtaaacggcataaggtttatggga 16019  T

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Target: scaffold0098 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 42338 - 42397
Alignment:
Q  155 aaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattga 214  Q
    ||||||||||| |||||||| ||||||||||||| || ||||||||||||| ||||||||    
T  42338 aaaatactaacagagaggaccaaaatagtaaacgacagaagatttatgggatcaaattga 42397  T

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Target: scaffold0046 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 23492 - 23429
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| |||||||||||||||||||||||||||||| | ||||||| | ||||||||||||||||    
T  23492 aagagttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataa 23429  T

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Target: scaffold0177 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 1928 - 1809
Alignment:
Q  106 ttgatcgtcaatcttaaatgacacgtggaaaagagttaacagattttgcaaaatactaacggagaggactaaaatagtaaacggcataagatttatggga 205  Q
    |||||| |||||||||||||||| ||||  ||| ||||||   ||||| || | ||||||||||||||| |||| ||  |||| || ||||  || ||||    
T  1928 ttgatcttcaatcttaaatgacatgtgggcaagggttaactatttttgaaacaaactaacggagaggaccaaaagaggtaacgacagaagacataaggga 1829  T
Q  206 ccaaattgagacattttata 225  Q
    ||||||||||||| ||||||    
T  1828 ccaaattgagacactttata 1809  T

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Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 13234 - 13297
Alignment:
Q  193 aagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    |||| ||||||||| |||||||||||||||||||| | ||||||| | ||||||||||||||||    
T  13234 aagagttatgggacgaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataa 13297  T

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Target: scaffold0045 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 77180 - 77274
Alignment:
Q  162 taacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtcagg-gaccatattgaaaaccaaaaataa 255  Q
    ||||||||| ||| |||| ||||||||| | || ||||||||||||||||||| ||  |||||||| ||| ||||| | ||||||| ||||||||    
T  77180 taacggagaagaccaaaacagtaaacggtagaatatttatgggaccaaattgaaacgctttatagttaggagaccaaagtgaaaacaaaaaataa 77274  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 56718 - 56762
Alignment:
Q  181 agtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  56718 agtaaacggcagaagatttataggaccaaattgagacactttata 56762  T

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Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 54716 - 54645
Alignment:
Q  154 caaaatactaacggagaggactaaaatagtaaacggcataagatttatgggaccaaattgagacattttata 225  Q
    ||||| ||||||||||||||| | | | |||||| |   |||||||||||||||||||||||||| ||||||    
T  54716 caaaaaactaacggagaggaccacattggtaaacagaggaagatttatgggaccaaattgagacactttata 54645  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 96263 - 96183
Alignment:
Q  176 aaaatagtaaacggcataagatttatgggaccaaattgagacattttatagtca-gggaccatattgaaaaccaaaaataa 255  Q
    ||||| |||||||| | ||||||||| ||| |||||||||||| |||||||| | ||||||| |||||||| | |||||||    
T  96263 aaaatggtaaacggaagaagatttatcggatcaaattgagacactttatagttaggggaccaaattgaaaatcgaaaataa 96183  T

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