View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9828_low_6 (Length: 497)
Name: NF9828_low_6
Description: NF9828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9828_low_6 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 291
Target Start/End: Complemental strand, 8697424 - 8697152
Alignment:
| Q |
19 |
aaaagctccattatgtacctttattccaactacataatcatcaataatcccattctttcaaggtacatatattctctttataaagcaacatagtaccttg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8697424 |
aaaagctccattatgtacctttattccaactacataatcatcaataatcccattctttcaaggtacatatattctctttataaagcaacatagtaccttg |
8697325 |
T |
 |
| Q |
119 |
tttttctattattttctaaacacaaatattttgtaacaaacatactcgataagaaattctttgtgtgagactttggtatagaagagaggcacaagcttct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| |||||||||| |
|
|
| T |
8697324 |
tttttctattattttctaaacacaaatattttgtaacaaacatactcgataagacattctttgtttgagactttggtagagaagagaggaacaagcttct |
8697225 |
T |
 |
| Q |
219 |
tatatttgggattttacttcaagttggtataattaataggaaatgttaaagagtgtctttaggacattggtta |
291 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| ||||| ||||||||| |
|
|
| T |
8697224 |
tatatttgggattttactccaagttggtataattaatgggaaacgttaaagagtgctcttagggcattggtta |
8697152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 259 - 406
Target Start/End: Original strand, 39418098 - 39418245
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||| |||||||||| ||||| |
|
|
| T |
39418098 |
aaatgttaaagagtgtccttaggacattggttaagagtacaaatttagaaatgttgtattggataatggtaaaaagtgatatgtttgactttttaaaagt |
39418197 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaaacttgtcattttttatttcctta |
406 |
Q |
| |
|
||||||||| | |||| ||| ||||||| |||||||| |||||||| |
|
|
| T |
39418198 |
taaaaaattgttgaatttaatacaaacttaccattttttgtttcctta |
39418245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 417
Target Start/End: Original strand, 10567284 - 10567417
Alignment:
| Q |
284 |
attggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaa |
383 |
Q |
| |
|
||||||||||||||| || ||| |||||||||||| |||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||| ||| |
|
|
| T |
10567284 |
attggttaagaagactaatttaaaaatgttgtattaggaaatggtggaaagtgatggatttgactttttaaaaattaaaaaattgttaaattcaatacaa |
10567383 |
T |
 |
| Q |
384 |
acttgtcattttttatttccttaactaatgccct |
417 |
Q |
| |
|
|||| | ||||||| | |||| | |||||||||| |
|
|
| T |
10567384 |
acttattattttttgtctcctcagctaatgccct |
10567417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 385
Target Start/End: Complemental strand, 3769951 - 3769816
Alignment:
| Q |
250 |
attaataggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgactt |
349 |
Q |
| |
|
|||||| ||||||||||||||||||| || | || |||||||| | || ||| |||||||| ||| ||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
3769951 |
attaatgggaaatgttaaagagtgtccttcgaactttggttaataggataaatttagaaatattgcattgaaaaatggtgaaaagtgataaatttgactt |
3769852 |
T |
 |
| Q |
350 |
ttaaaaagataaaaaattcctaaattcaatgcaaac |
385 |
Q |
| |
|
|| ||||| ||||| ||| |||||||||||||||| |
|
|
| T |
3769851 |
tttaaaagttaaaatattgttaaattcaatgcaaac |
3769816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 387
Target Start/End: Complemental strand, 49483226 - 49483098
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||||| ||| ||| ||| || ||||| |||||||| ||||||||||||||||||||| |||| |
|
|
| T |
49483226 |
aaatgttaaagagtgcctttaggatattggttaagaagataaatttataaaaattttattggaaaatggtgaaaagtgatagatttgactttttcaaagt |
49483127 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaaactt |
387 |
Q |
| |
|
||||||||| | |||||||| ||||||| |
|
|
| T |
49483126 |
taaaaaattattgaattcaattcaaactt |
49483098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 410
Target Start/End: Complemental strand, 21760699 - 21760548
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
|||||||||||| |||| ||| ||||||| ||||||||||||| ||| |||| ||||||| | |||| || ||| |||||||||| |||||| |||| |
|
|
| T |
21760699 |
aaatgttaaagaatgtccttaagacattgattaagaagacaaatttaaaaatattgtattaaaaaatagtaaaaaatgatagatttaacttttgaaaaat |
21760600 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaacta |
410 |
Q |
| |
|
||||||||| ||||||||||| ||| || || |||| ||||| ||||||| |
|
|
| T |
21760599 |
taaaaaattattaaattcaatgtaaatttaccacttttaatttctttaacta |
21760548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 2940217 - 2940327
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||| |||| |||| | ||||| |||| ||||||| |||||| |||||||||||| |||| ||||||||| ||| || | |||||||||||| |||| |
|
|
| T |
2940217 |
ggaaatgctaaatagtgcccttagggcattagttaagaggacaaatttagaaatgttgcattgggaaatggtgaaaaatggttgatttgactttttaaaa |
2940316 |
T |
 |
| Q |
357 |
gataaaaaatt |
367 |
Q |
| |
|
| ||||||||| |
|
|
| T |
2940317 |
gttaaaaaatt |
2940327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 326
Target Start/End: Original strand, 32884967 - 32885035
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatg |
326 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
32884967 |
gaaatgttaaagagtgtccttaggacattgattaagaagacaaaaaatgaaatattgtattgagaaatg |
32885035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 383
Target Start/End: Complemental strand, 48513748 - 48513624
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||| || |||| || ||| ||||||||| ||||| || ||||||| |||||| |||||| ||||| |
|
|
| T |
48513748 |
aaatgctaaatagtgtctttaggacattggttaagacgataaaaataaaaacattgtattgaaaaatgatgaaaagtgaaagatttaactttttaaaagt |
48513649 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaa |
383 |
Q |
| |
|
|||| ||| | |||||||||||| |
|
|
| T |
48513648 |
caaaacattgttgaattcaatgcaa |
48513624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 259 - 350
Target Start/End: Original strand, 11996084 - 11996174
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttt |
350 |
Q |
| |
|
||||| ||||||||| | ||||| ||| |||||||| |||||| ||||||||||||||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
11996084 |
aaatgctaaagagtgcccttagggcat-ggttaagaggacaaacttagaaatgttgtattggaaaatggtgaaaagtgatagatttaacttt |
11996174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 385
Target Start/End: Original strand, 35675159 - 35675296
Alignment:
| Q |
248 |
taattaataggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgac |
347 |
Q |
| |
|
|||||| |||||||| |||||| || | || || |||||||||||| || |||| ||||||| |||||||| ||||| ||| |||||||| |||| || |
|
|
| T |
35675159 |
taattattaggaaattctaaagactgcccttggggcattggttaagacgataaaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaac |
35675258 |
T |
 |
| Q |
348 |
ttttaaaaagataaaaaattcctaaattcaatgcaaac |
385 |
Q |
| |
|
|||| ||||| ||||| ||| | |||||||||||||| |
|
|
| T |
35675259 |
tttttaaaagttaaaatattgttgaattcaatgcaaac |
35675296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 363
Target Start/End: Original strand, 35511160 - 35511264
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||||||| |||||| |||| |||||||||||| ||| ||| ||||||| |||||||| |||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
35511160 |
aaatgttaaggagtgtttttaaaacattggttaagtagatgaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttgactttttaaaagt |
35511259 |
T |
 |
| Q |
359 |
taaaa |
363 |
Q |
| |
|
||||| |
|
|
| T |
35511260 |
taaaa |
35511264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 8688878 - 8688800
Alignment:
| Q |
19 |
aaaagctccattatgtacctttattccaactacataatcatcaat----aatccc--attctttcaaggtacatatatt |
91 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
8688878 |
aaaaactccattatgtaccttctttccaactacaaaatcatcaatcaataatccctaattctttcaaggtacatatatt |
8688800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 44478830 - 44478722
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||| |||||| ||| ||||||||||||| |||| ||| ||| | || ||||| |||||| ||||| |
|
|
| T |
44478830 |
aaatgttaaagagtgtcctttcaacatttgttaagaggacaaacttaaaaatgttgtattggaaaattgtgaaaaataatggatttaactttttaaaagt |
44478731 |
T |
 |
| Q |
359 |
taaaaaatt |
367 |
Q |
| |
|
|||||||| |
|
|
| T |
44478730 |
aaaaaaatt |
44478722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 52895854 - 52895775
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtga |
337 |
Q |
| |
|
||||||| |||||||||||||| || |||| ||||||| || |||| |||||| |||||||||||||| ||| ||||||| |
|
|
| T |
52895854 |
ggaaatgctaaagagtgtctttggg-catttgttaagatgataaaaatagaaacattgtattgagaaattgtgaaaagtga |
52895775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 25723182 - 25723261
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgat |
338 |
Q |
| |
|
||||| |||| |||||| ||||| |||| |||||||||| ||| ||| |||||||||||||| |||| || |||||||| |
|
|
| T |
25723182 |
aaatgctaaaaagtgtccttaggtcatttgttaagaagaaaaacttaaaaatgttgtattgaaaaattgttaaaagtgat |
25723261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 33803501 - 33803404
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaa |
355 |
Q |
| |
|
||||||||||||| |||| ||| | ||||||||||| ||||||| || |||| ||||||||| |||| || ||| | ||| |||| |||||||||| |
|
|
| T |
33803501 |
gaaatgttaaagaatgtccttaaggtattggttaagaggacaaaaatataaatattgtattgaaaaattatgaaaaataataaatttaacttttaaaa |
33803404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 257 - 439
Target Start/End: Complemental strand, 5671660 - 5671478
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5671660 |
ggaaatattaaagagtgttcttagggcattgattaagaagataaaattagaaatgttttattgagaaatggtgaaaagtgatagatttgacttttaaaaa |
5671561 |
T |
 |
| Q |
357 |
gataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgcccttagggtacttgttagcataacc |
439 |
Q |
| |
|
| |||||||||| | |||| ||||||||||| ||||||||||||||||||||| |||| |||||| | | |||||||||||| |
|
|
| T |
5671560 |
gttaaaaaattcttgaattgaatgcaaacttaccattttttatttccttaactagtgccattagggcattggttagcataacc |
5671478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 258 - 409
Target Start/End: Original strand, 29260107 - 29260258
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaag |
357 |
Q |
| |
|
|||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
29260107 |
gaaatgctaaagagtgtccttaagacatttgttaagaagacaaaattagaaatgttgtactggaaaatggtgaaaagtgatagatttgacttttaaaaag |
29260206 |
T |
 |
| Q |
358 |
ataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaact |
409 |
Q |
| |
|
||||||||| | |||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
29260207 |
ttaaaaaattgttgaattcaatgcgaacttatcatttttggtttccttaact |
29260258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 258 - 387
Target Start/End: Complemental strand, 34512776 - 34512647
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaag |
357 |
Q |
| |
|
|||||||||||||||| | ||| |||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
34512776 |
gaaatgttaaagagtgcccttatgacattggttaagaggacaaatttagaaatgttgtattagaaaatggtgaaaagtgatagatttgactttttaaaag |
34512677 |
T |
 |
| Q |
358 |
ataaaaaattcctaaattcaatgcaaactt |
387 |
Q |
| |
|
||||||||| |||||||||| ||||||| |
|
|
| T |
34512676 |
ttaaaaaattgttaaattcaatacaaactt |
34512647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 14120803 - 14120962
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||||||||||||| | ||| |||||||||||| |||||| ||| |||||||||||||| |||||||| |||||||||||||| ||||| || || |
|
|
| T |
14120803 |
aaatgttaaagagtgcccttaaagcattggttaagaggacaaatttaaaaatgttgtattga-aaatggtgaaaagtgatagatttagctttttaatagt |
14120901 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgccctta |
419 |
Q |
| |
|
||||||||| |||||||||| ||| || ||||||| ||||||||||||||| ||||| |
|
|
| T |
14120902 |
taaaaaattgttaaattcaatataaatttaccatttttagtttccttaactaatgtcctta |
14120962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 408
Target Start/End: Complemental strand, 1729595 - 1729465
Alignment:
| Q |
277 |
ttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattc |
376 |
Q |
| |
|
||||| |||||||||||| |||||| |||||||||||||||||| |||||||| ||| ||||||||||||| ||| ||||| ||||||||| | ||||| |
|
|
| T |
1729595 |
ttagggcattggttaagaggacaaacttagaaatgttgtattgaaaaatggtgaaaaatgatagatttgac-tttgaaaagttaaaaaattgttgaattc |
1729497 |
T |
 |
| Q |
377 |
aatgcaaacttgtcattttttatttccttaac |
408 |
Q |
| |
|
||| ||| ||| |||||| |||||||||| |
|
|
| T |
1729496 |
aatacaagcttaatatttttagtttccttaac |
1729465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 387
Target Start/End: Original strand, 747498 - 747599
Alignment:
| Q |
286 |
tggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaaac |
385 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||| |||| ||| |||||||||||||| |||||| ||||| ||||||||| | |||||||||| ||| |
|
|
| T |
747498 |
tggttaagaggacaaacttagaaatgttgtattggaaaatagtgaaaagtgatagatttaactttttaaaagttaaaaaattgttgaattcaatgccaac |
747597 |
T |
 |
| Q |
386 |
tt |
387 |
Q |
| |
|
|| |
|
|
| T |
747598 |
tt |
747599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 31911143 - 31911235
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgactt |
349 |
Q |
| |
|
||||||||||||||| | | ||| | ||||||| |||| |||||| ||| |||| |||||||| |||||||| |||||||||||||| |||| |
|
|
| T |
31911143 |
ggaaatgttaaagagagaccttatggcattggtcaagaggacaaacttaaaaatattgtattggaaaatggtgaaaagtgatagatttaactt |
31911235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 34220624 - 34220730
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||||||||| ||| | ||| |||||||||||||| || |||| ||||||| ||| |||| ||| ||||| |||||||| |||| | |||| |||| |
|
|
| T |
34220624 |
ggaaatgttaaagtgtgcccttaagacattggttaagaggataaaaatagaaatcttgcattgggaagtggtgaaaagtgatgaatttaagtttttaaaa |
34220723 |
T |
 |
| Q |
357 |
gataaaa |
363 |
Q |
| |
|
| ||||| |
|
|
| T |
34220724 |
gttaaaa |
34220730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 41890231 - 41890272
Alignment:
| Q |
399 |
tttccttaactaatgcccttagggtacttgttagcataaccc |
440 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
41890231 |
tttccttaacaaatgcccttagggcacttgttagcataaccc |
41890272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 363
Target Start/End: Complemental strand, 8327109 - 8327005
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||| || |||| || |||| ||| ||||||||| || ||||||| | |||| |||||| ||||| |
|
|
| T |
8327109 |
aaatattaaagagtgtctttagatcattggttaagaggataaaaataaaaatattgctttgagaaataatgaaaagtgaaaaatttaactttttaaaagt |
8327010 |
T |
 |
| Q |
359 |
taaaa |
363 |
Q |
| |
|
||||| |
|
|
| T |
8327009 |
taaaa |
8327005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 22444079 - 22444019
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattg |
319 |
Q |
| |
|
|||||||||||||||| ||| |||| |||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
22444079 |
aaatgttaaagagtgttcttaagacagtggttaagaaaacaaacttagaaaagttgtattg |
22444019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 37230349 - 37230269
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgata |
339 |
Q |
| |
|
||||||||||||||||| ||| | |||||||||| | | || | ||||||| ||||||||| |||||||| ||||||||| |
|
|
| T |
37230349 |
aaatgttaaagagtgtcattaaggcattggttaatagcataagaatagaaatattgtattgaaaaatggtgaaaagtgata |
37230269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 19851726 - 19851673
Alignment:
| Q |
334 |
gtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaaactt |
387 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| | |||||||| ||||||| |
|
|
| T |
19851726 |
gtgatagatttgactttttaaaagttaaaaaattgttgaattcaatacaaactt |
19851673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 2805514 - 2805446
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaat |
325 |
Q |
| |
|
||||||||||||||||||| | | |||||||||||||| || |||| || || | ||||||||| |||| |
|
|
| T |
2805514 |
ggaaatgttaaagagtgtcctgaagacattggttaagaggataaaaatataagtattgtattgaaaaat |
2805446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 3636411 - 3636371
Alignment:
| Q |
400 |
ttccttaactaatgcccttagggtacttgttagcataaccc |
440 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
3636411 |
ttccttaaacaatgcccttagggcacttgttagcataaccc |
3636371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 409
Target Start/End: Original strand, 29213340 - 29213490
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| | |||||| ||||||| ||| |||||| |||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
29213340 |
aaatgttaaagagtgtccttagggcattggttaataggacaaatttagaaacgttatattgaaaaatggtgaaaaatgatagatttgactttttaaaagt |
29213439 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaact |
409 |
Q |
| |
|
||||||||| || |||||||||||||||| ||||||| |||| ||||||| |
|
|
| T |
29213440 |
taaaaaattgctgaattcaatgcaaacttaccatttttaattttcttaact |
29213490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 257 - 440
Target Start/End: Complemental strand, 4298469 - 4298285
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattg-agaaatggtggaaagtgatagatttgacttttaaaa |
355 |
Q |
| |
|
|||||||||||| |||| | |||| |||||||||| | |||||| ||| ||||||||||||| | |||||||| ||||||||||||||||||||| ||| |
|
|
| T |
4298469 |
ggaaatgttaaatagtgcccttagagcattggttaaaatgacaaatttaaaaatgttgtattggaaaaatggtgaaaagtgatagatttgactttttaaa |
4298370 |
T |
 |
| Q |
356 |
agataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgcccttagggtacttgttagcataaccc |
440 |
Q |
| |
|
| ||||||||| |||||||||| |||| ||| | |||||| || |||||||| |||| ||||| ||| ||||||||||||| |
|
|
| T |
4298369 |
aattaaaaaattactaaattcaacgcaatcttattatttttagatttcttaactagtgcctttaggataccggttagcataaccc |
4298285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 415
Target Start/End: Complemental strand, 50673211 - 50673054
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||| ||||||||| | ||||| |||||||||||||| ||| ||| ||||||||||||| ||||| ||| ||||||||||||||||||||| |||| |
|
|
| T |
50673211 |
ggaaatgctaaagagtgcccttagggcattggttaagaaggtaaatttaaaaatgttgtattgggaaatagtgaaaagtgatagatttgactttttaaaa |
50673112 |
T |
 |
| Q |
357 |
gataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgcc |
415 |
Q |
| |
|
| | ||||||| | |||||||||||| ||| ||||||||| ||| ||||||| |||| |
|
|
| T |
50673111 |
g-ttaaaaattgcagaattcaatgcaatcttatcattttttgttttgttaactagtgcc |
50673054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 257 - 387
Target Start/End: Original strand, 12060037 - 12060167
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||||||||||||| |||| || ||||||||||| |||||| |||||||| |||||||| ||||| || |||||||||||||||| |||| |||| |
|
|
| T |
12060037 |
ggaaatgttaaagagtgcctttggggtattggttaagaggacaaatttagaaatattgtattggaaaatgatgaaaagtgatagatttgagtttttaaaa |
12060136 |
T |
 |
| Q |
357 |
gataaaaaattcctaaattcaatgcaaactt |
387 |
Q |
| |
|
| ||||||||| | |||||||||| ||||| |
|
|
| T |
12060137 |
gttaaaaaattgttgaattcaatgccaactt |
12060167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 43451626 - 43451517
Alignment:
| Q |
284 |
attggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaa |
383 |
Q |
| |
|
|||| |||||| |||||| |||||||||||||| |||||||| ||| |||||||||||||||| |||| ||||| ||||||||| | |||||||||||| |
|
|
| T |
43451626 |
attgtttaagaggacaaatttagaaatgttgtaatgagaaattgtgaaaagtgatagatttgatttttgaaaagttaaaaaattattgaattcaatgcaa |
43451527 |
T |
 |
| Q |
384 |
acttgtcatt |
393 |
Q |
| |
|
|||| ||||| |
|
|
| T |
43451526 |
acttatcatt |
43451517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 424
Target Start/End: Original strand, 20256068 - 20256231
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
|||||||||||||| || ||| ||||||| ||||||||| ||| | |||||||||||||| | ||||||| |||||||||||||||| ||| ||||| |
|
|
| T |
20256068 |
aaatgttaaagagtatccttatgacattgattaagaagataaattcagaaatgttgtattaggtaatggtgaaaagtgatagatttgatcttttaaaagt |
20256167 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgcccttagggta |
424 |
Q |
| |
|
||||||||| | ||||| || ||| || ||||||| |||||||||||| |||||| |||||| |
|
|
| T |
20256168 |
taaaaaattgatgaattcgatccaagct--ccatttttggtttccttaactagtgccctaagggta |
20256231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 417
Target Start/End: Complemental strand, 50420741 - 50420655
Alignment:
| Q |
331 |
aaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgccct |
417 |
Q |
| |
|
|||||||||||||| |||||| ||||| ||||||||| | ||||||||||||| || |||||||| ||||| ||||||| |||||| |
|
|
| T |
50420741 |
aaagtgatagatttaactttttaaaagttaaaaaattgttgaattcaatgcaaaattttcatttttaatttctttaactagtgccct |
50420655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 385
Target Start/End: Original strand, 34060745 - 34060872
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaat-tagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaag |
357 |
Q |
| |
|
||||| ||||||||||| || | ||||||||||||||| |||| || |||| ||||||||| |||||||| |||||||| |||| |||||| ||||| |
|
|
| T |
34060745 |
aaatgctaaagagtgtccttggtgcattggttaagaagataaaaaataaaaatattgtattgaaaaatggtgaaaagtgatgaatttaactttttaaaag |
34060844 |
T |
 |
| Q |
358 |
ataaaaaattcctaaattcaatgcaaac |
385 |
Q |
| |
|
||||| ||| | |||||||||||||| |
|
|
| T |
34060845 |
ttaaaatattgttgaattcaatgcaaac |
34060872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 18765 - 18864
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||| ||||||||| | ||||| |||||||||||| || |||| ||||||| ||| |||| |||| |||| |||||||| |||| |||||| |||| |
|
|
| T |
18765 |
ggaaatgctaaagagtgcccttagggcattggttaagaggataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaa |
18864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 46365367 - 46365296
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggt |
328 |
Q |
| |
|
||||||| ||||||||| |||||| ||||| |||||| |||||| ||||||| ||||||||||||||||| |
|
|
| T |
46365367 |
ggaaatgctaaagagtgcctttagagcattgtttaagagaacaaaaatagaaatattgtattgagaaatggt |
46365296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 17073064 - 17073173
Alignment:
| Q |
283 |
cattggttaagaagacaaaattagaaatgttgtattga-----gaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattca |
377 |
Q |
| |
|
||||| ||||||||| ||| |||||||||||| ||||| ||||||||| |||| ||||||||||||||| |||| ||||||| | | |||||| |
|
|
| T |
17073064 |
cattgattaagaagataaatttagaaatgttgcattgaaaagggaaatggtgacaagtaatagatttgacttttgaaaaattaaaaaaatgttgaattca |
17073163 |
T |
 |
| Q |
378 |
atgcaaactt |
387 |
Q |
| |
|
|||||||||| |
|
|
| T |
17073164 |
atgcaaactt |
17073173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 356
Target Start/End: Original strand, 48313818 - 48313915
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
|||||||||||| ||||||| || ||||| |||||| | |||| |||||| |||||||| ||||||||| |||| || | ||||||||||| |||| |
|
|
| T |
48313818 |
aaatgttaaagattgtctttggggcattgattaagatcataaaaatagaaacattgtattgggaaatggtgaaaagcgaaaaatttgactttttaaaa |
48313915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 46298873 - 46298809
Alignment:
| Q |
265 |
taaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtg |
329 |
Q |
| |
|
||||||||| ||||| | |||||||||||| |||||| ||||||| | |||||||| |||||||| |
|
|
| T |
46298873 |
taaagagtgcctttaaggcattggttaagaggacaaatttagaaacgatgtattgaaaaatggtg |
46298809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 15005937 - 15005900
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaaga |
294 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
15005937 |
ggaaatgttaaatagtgtctttgggacattggttaaga |
15005900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 29577285 - 29577237
Alignment:
| Q |
392 |
ttttttatttccttaactaatgcccttagggtacttgttagcataaccc |
440 |
Q |
| |
|
||||||| ||||||||||||||||| |||| || |||||||||||||| |
|
|
| T |
29577285 |
ttttttaaatccttaactaatgccctaagggcacctgttagcataaccc |
29577237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 259 - 418
Target Start/End: Original strand, 39972132 - 39972291
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||| ||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
39972132 |
aaatgctaaagagtgcccttagggcattggttaagaagacaaatttagaaatgttgtattgggaaatggtgaaaagtgatgaatttgactttttaaaagt |
39972231 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgccctt |
418 |
Q |
| |
|
||||||||| | |||||||||||||| | |||||| |||||||||||| ||||||| |
|
|
| T |
39972232 |
taaaaaattgttcaattcaatgcaaacatactatttttggtttccttaactagtgccctt |
39972291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 411
Target Start/End: Complemental strand, 13520749 - 13520594
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||| |||| |||||| ||| |||||||||||| | || ||| |||||||||||||| | || |||||| ||||| ||||||||| ||||| |||| |
|
|
| T |
13520749 |
ggaaatgctaaaaagtgtccttaagacattggttaaaaggataaatttagaaatgttgtagtaggatatggtgaaaagtaatagatttggcttttgaaaa |
13520650 |
T |
 |
| Q |
357 |
gataaaaaattcctaaattcaatgcaaacttgtca-ttttttatttccttaactaa |
411 |
Q |
| |
|
| ||||||||| ||||||||||| ||||||| || |||||| ||||||||||||| |
|
|
| T |
13520649 |
gttaaaaaattgctaaattcaatacaaacttaccatttttttgtttccttaactaa |
13520594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 411
Target Start/End: Complemental strand, 13610284 - 13610129
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||| |||| |||||| ||| |||||||||||| | || ||| |||||||||||||| | || |||||| ||||| ||||||||| ||||| |||| |
|
|
| T |
13610284 |
ggaaatgctaaaaagtgtccttaagacattggttaaaaggataaatttagaaatgttgtagtaggatatggtgaaaagtaatagatttggcttttgaaaa |
13610185 |
T |
 |
| Q |
357 |
gataaaaaattcctaaattcaatgcaaacttgtca-ttttttatttccttaactaa |
411 |
Q |
| |
|
| ||||||||| ||||||||||| ||||||| || |||||| ||||||||||||| |
|
|
| T |
13610184 |
gttaaaaaattgctaaattcaatacaaacttaccatttttttgtttccttaactaa |
13610129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 387
Target Start/End: Complemental strand, 5074962 - 5074832
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||| ||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||| ||||| || ||| | ||||| ||||||||| ||| |
|
|
| T |
5074962 |
ggaaatgctaaagagtgcctttagggcattggttaagatgacaaacttagaaatgttgtattggaaaatgttgaaaaattatagaattgacttttttaaa |
5074863 |
T |
 |
| Q |
357 |
gataaaaaattcctaaattcaatgcaaactt |
387 |
Q |
| |
|
| ||||||||| | |||||| ||||||||| |
|
|
| T |
5074862 |
gttaaaaaattgttgaattcagtgcaaactt |
5074832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 410
Target Start/End: Original strand, 35236975 - 35237101
Alignment:
| Q |
284 |
attggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaa |
383 |
Q |
| |
|
|||||| |||| || ||| |||||||||||||||||| || ||||| ||||||||| |||| |||||||||| || ||||| ||||||||||||||| |
|
|
| T |
35236975 |
attggtcaagatgataaatttagaaatgttgtattgaaaagtggtgaaaagtgataaatttactttttaaaaagttataaaatcgctaaattcaatgcaa |
35237074 |
T |
 |
| Q |
384 |
acttgtcattttttatttccttaacta |
410 |
Q |
| |
|
|||| ||||||||| ||| |||||||| |
|
|
| T |
35237075 |
acttatcattttttgttttcttaacta |
35237101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 282 - 412
Target Start/End: Complemental strand, 8810604 - 8810475
Alignment:
| Q |
282 |
acattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgc |
381 |
Q |
| |
|
||||| ||||||| |||||| ||| ||||||||||||| ||||||||| ||||| |||||||| |||||| |||| ||||||||| | ||| ||||| |
|
|
| T |
8810604 |
acattagttaagatgacaaattta-aaatgttgtattgggaaatggtgaaaagtaatagatttaactttttaaaaattaaaaaattattgtatttaatgc |
8810506 |
T |
 |
| Q |
382 |
aaacttgtcattttttatttccttaactaat |
412 |
Q |
| |
|
|||||| ||| ||||||||| |||||||||| |
|
|
| T |
8810505 |
aaacttatcaatttttattttcttaactaat |
8810475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 397
Target Start/End: Original strand, 5216979 - 5217099
Alignment:
| Q |
277 |
ttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattc |
376 |
Q |
| |
|
||||| |||| ||||| | || ||| |||||||||||||||||| ||| ||| |||| ||||||| |||||||| ||||| ||||||||| ||||||| |
|
|
| T |
5216979 |
ttagggcattagttaaaaggataaatttagaaatgttgtattgaaaaactgtgaaaagcgatagatctgactttttaaaagttaaaaaattgttaaattc |
5217078 |
T |
 |
| Q |
377 |
aatgcaaacttgtcatttttt |
397 |
Q |
| |
|
|| |||||||| |||||||| |
|
|
| T |
5217079 |
aacgcaaacttaccatttttt |
5217099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 7475933 - 7475838
Alignment:
| Q |
272 |
tgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaatt |
367 |
Q |
| |
|
|||| |||| |||||| |||| | || ||| ||||||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||| |
|
|
| T |
7475933 |
tgtccttagaacattgattaaaaggataaatttagaaatgttgtattgagaaatggtgaaaaacgatagatttgacttttgaaaacttaaaaaatt |
7475838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 387
Target Start/End: Original strand, 36766624 - 36766755
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgac-ttttaaaa |
355 |
Q |
| |
|
||||||| ||||||||| ||||| |||| |||||| || ||| |||||||||||||||||| ||||| | ||| ||||||||||||| ||| |||| |
|
|
| T |
36766624 |
ggaaatgctaaagagtgctcttagggtattgattaagaggataaatttagaaatgttgtattgaaaaatgataaaaaatgatagatttgacgtttgaaaa |
36766723 |
T |
 |
| Q |
356 |
agataaaaaattcctaaattcaatgcaaactt |
387 |
Q |
| |
|
|| ||||||||| |||||| ||||||||||| |
|
|
| T |
36766724 |
agttaaaaaattattaaatttaatgcaaactt |
36766755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 283 - 337
Target Start/End: Original strand, 11332798 - 11332852
Alignment:
| Q |
283 |
cattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtga |
337 |
Q |
| |
|
||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
11332798 |
cattggttaagaagataaaaatagaaatattgtattgagaaatggtgtaaagtga |
11332852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 7532916 - 7532835
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgat |
338 |
Q |
| |
|
||||||| |||||||||| ||||| ||||||||||| || |||| ||||||| |||||||| |||||||| |||||||| |
|
|
| T |
7532916 |
ggaaatgctaaagagtgttcttagggcattggttaaggggataaaaatagaaatattgtattggaaaatggtgaaaagtgat |
7532835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 413
Target Start/End: Complemental strand, 43285271 - 43285177
Alignment:
| Q |
322 |
aaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaat---tcaatgcaaacttgtcattttttatttccttaactaatg |
413 |
Q |
| |
|
|||||||| |||||||||||||||| |||| ||||| ||||||||| | ||| |||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
43285271 |
aaatggtgaaaagtgatagatttgatttttgaaaagttaaaaaattgttgaattcatcaatgttaacttaccattttttgtttccttaactaatg |
43285177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 39491792 - 39491851
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtatt |
318 |
Q |
| |
|
|||||||||||||| | |||| |||||||||||||| ||||| ||| |||||||||||| |
|
|
| T |
39491792 |
aaatgttaaagagtacccttagaacattggttaagaaaacaaatttaaaaatgttgtatt |
39491851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 11295444 - 11295542
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaag |
357 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| || || ||| || ||| ||||||||||||||| || ||| |||| |||| |||||| ||||| |
|
|
| T |
11295444 |
aaatgttaaagagtgtccttaagacattggttacgatgatgaaaatataaacattgtattgagaaatgatgaaaaatgatgaatttaactttttaaaag |
11295542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 31596401 - 31596499
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaag |
357 |
Q |
| |
|
||||| ||||||||||| || |||||||| |||||| || |||| ||||||| |||| || | |||||||| ||| |||| |||| |||||| ||||| |
|
|
| T |
31596401 |
aaatgctaaagagtgtcattgggacattgattaagatgataaaaatagaaatattgtgttaaaaaatggtgaaaaatgatgaattttactttttaaaag |
31596499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 66; Significance: 6e-29; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 265 - 410
Target Start/End: Complemental strand, 36596703 - 36596558
Alignment:
| Q |
265 |
taaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaa |
364 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||| ||||| |||||| |||| ||||| |||||| |
|
|
| T |
36596703 |
taaagagtgcctttaggacattgattaagaagacaaacttagaaatgttgtattgagaaacaatgaaaattgatatatttgaatttttaaaagttaaaaa |
36596604 |
T |
 |
| Q |
365 |
attcctaaattcaatgcaaacttgtcattttttatttccttaacta |
410 |
Q |
| |
|
||| | |||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
36596603 |
attgttgaattcaatgcaaacttactatttttaatttctttaacta |
36596558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 415
Target Start/End: Complemental strand, 40289199 - 40289067
Alignment:
| Q |
283 |
cattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgca |
382 |
Q |
| |
|
|||||||||||| || ||| ||| ||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| |||| |||| | ||||||||||| |
|
|
| T |
40289199 |
cattggttaagaggataaatttaaaaatgttgtattgggaaatagtgaaaagtgatagatttgacttttgaaaagttaaataattattgaattcaatgca |
40289100 |
T |
 |
| Q |
383 |
aacttgtcattttttatttccttaactaatgcc |
415 |
Q |
| |
|
||||| |||||||||||| |||||||| |||| |
|
|
| T |
40289099 |
aacttaccattttttattttcttaactagtgcc |
40289067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 384
Target Start/End: Original strand, 21268278 - 21268396
Alignment:
| Q |
265 |
taaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaa |
364 |
Q |
| |
|
||||||||| | ||||| |||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||||||| |||||| ||||| |||||| |
|
|
| T |
21268278 |
taaagagtgcccttagggcattggttaagaggacaaacttagaaatgttgtattgagaaatggtgaaaaatgatagatttaactttt-aaaagttaaaaa |
21268376 |
T |
 |
| Q |
365 |
attcctaaattcaatgcaaa |
384 |
Q |
| |
|
||| | |||||||| |||| |
|
|
| T |
21268377 |
attgttgaattcaatacaaa |
21268396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 438
Target Start/End: Complemental strand, 12381302 - 12381150
Alignment:
| Q |
284 |
attggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaa |
383 |
Q |
| |
|
||||||||||| || | | ||| ||||||| ||||||||||| ||| || |||||||||||||||||| ||||| ||||||||| | |||||||| || |
|
|
| T |
12381302 |
attggttaagaggagatatttaaaaatgttctattgagaaatagtgaaatgtgatagatttgacttttgaaaagttaaaaaattgttgaattcaat--aa |
12381205 |
T |
 |
| Q |
384 |
acttgtcattttttatttccttaactaatgcccttagggtacttgttagcataac |
438 |
Q |
| |
|
|||| |||||||| ||| |||||||| || ||| |||| || ||||||||||| |
|
|
| T |
12381204 |
acttaccattttttgtttacttaactagtgtcctaagggcaccggttagcataac |
12381150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 438
Target Start/End: Complemental strand, 12385369 - 12385217
Alignment:
| Q |
284 |
attggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaa |
383 |
Q |
| |
|
||||||||||| || | | ||| ||||||| ||||||||||| ||| || |||||||||||||||||| ||||| ||||||||| | |||||||| || |
|
|
| T |
12385369 |
attggttaagaggagatatttaaaaatgttctattgagaaatagtgaaatgtgatagatttgacttttgaaaagttaaaaaattgttgaattcaat--aa |
12385272 |
T |
 |
| Q |
384 |
acttgtcattttttatttccttaactaatgcccttagggtacttgttagcataac |
438 |
Q |
| |
|
|||| |||||||| ||| |||||||| || ||| |||| || ||||||||||| |
|
|
| T |
12385271 |
acttaccattttttgtttacttaactagtgtcctaagggcaccggttagcataac |
12385217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 387
Target Start/End: Original strand, 15444906 - 15445036
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaa-aattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaa |
355 |
Q |
| |
|
|||||||||||||||||| ||||||||| | |||||| |||| ||||| |||| |||||||||||||||||| ||||| ||| | |||| |||| ||| |
|
|
| T |
15444906 |
ggaaatgttaaagagtgttcttaggacatcgattaagagcacaagaatta-aaatattgtattgagaaatggtgaaaagtaataaagttgattttttaaa |
15445004 |
T |
 |
| Q |
356 |
agataaaaaattcctaaattcaatgcaaactt |
387 |
Q |
| |
|
|| ||||||||| | |||||||||||||||| |
|
|
| T |
15445005 |
agttaaaaaattattgaattcaatgcaaactt |
15445036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 41898835 - 41898940
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||| | | || ||||||| ||||||||| ||||||| |||||||| |||| |||||| |||| |
|
|
| T |
41898835 |
ggaaatgttaaagagtgttcttaggacgttggttaagaa-atacaaatagaaatattgtattgaaaaatggtaaaaagtgatgaatttaactttttaaaa |
41898933 |
T |
 |
| Q |
357 |
gataaaa |
363 |
Q |
| |
|
| ||||| |
|
|
| T |
41898934 |
gttaaaa |
41898940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 34644293 - 34644233
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtatt |
318 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||||| |||| || |||| ||||||| |
|
|
| T |
34644293 |
gaaatgttaaagagtgtccttaggacattgattaagaagataaaaataaaaattttgtatt |
34644233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 43168272 - 43168192
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtga |
337 |
Q |
| |
|
||||||| ||||||||| | ||||| |||||||||||| || |||| |||||| |||||||| ||||||||| ||||||| |
|
|
| T |
43168272 |
ggaaatgctaaagagtgcccttagggcattggttaagatgataaaaatagaaacattgtattgggaaatggtgaaaagtga |
43168192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 23328566 - 23328495
Alignment:
| Q |
296 |
gacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaatt |
367 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||||| ||| | ||||||||||||||| ||||| ||||||||| |
|
|
| T |
23328566 |
gacaaacttaaaaattttgtattgagaaatggtaaaaaattatagatttgactttttaaaagttaaaaaatt |
23328495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 21631209 - 21631267
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgta |
316 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||| || |||| ||||||| ||||| |
|
|
| T |
21631209 |
gaaatgctaaagagtgtctttgggacattggttaagatgataaaaatagaaatattgta |
21631267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 27210854 - 27210748
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
|||| |||||||||||| ||||||||||| |||||| || |||| || || | ||||| ||| |||||||| ||| |||| |||| |||||| ||||| |
|
|
| T |
27210854 |
aaatattaaagagtgtcgttaggacattgattaagaggataaaaataaaactattgtaatgaaaaatggtgaaaaatgatcaatttaactttttaaaagt |
27210755 |
T |
 |
| Q |
359 |
taaaaaa |
365 |
Q |
| |
|
||||||| |
|
|
| T |
27210754 |
taaaaaa |
27210748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 444
Target Start/End: Original strand, 44359647 - 44359834
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||| ||||||||| | || || |||||||||||| || |||| |||||| |||||| | ||||||||| ||||||| |||| |||||| |||| |
|
|
| T |
44359647 |
ggaaatgctaaagagtgcccttgggccattggttaagatgataaaaatagaaacattgtatcgggaaatggtgaaaagtgaagaatttaactttttaaaa |
44359746 |
T |
 |
| Q |
357 |
gataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgcccttagggtacttgttagcataacccataa |
444 |
Q |
| |
|
| |||| ||| | ||||||||| ||| | |||||| |||||||||| | |||||| |||| ||| ||||||| |||||||| |
|
|
| T |
44359747 |
gtcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgccctgagggcactagttagcaagacccataa |
44359834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 27160077 - 27160147
Alignment:
| Q |
256 |
aggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatg |
326 |
Q |
| |
|
||||||||||||||||||| |||||| ||| |||||||||| | || || |||| ||||||||| ||||| |
|
|
| T |
27160077 |
aggaaatgttaaagagtgtttttagggtattcgttaagaagatagaaataaaaattttgtattgaaaaatg |
27160147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 40920297 - 40920239
Alignment:
| Q |
278 |
taggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtg |
336 |
Q |
| |
|
||||||||||||||||| || |||| ||||||| ||| |||||||| ||||| |||||| |
|
|
| T |
40920297 |
taggacattggttaagaggataaaaatagaaatattgcattgagaagtggtgaaaagtg |
40920239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 267 - 440
Target Start/End: Complemental strand, 26539234 - 26539060
Alignment:
| Q |
267 |
aagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgac-ttttaaaaagataaaaaa |
365 |
Q |
| |
|
||||||| ||||||| |||| ||||||| ||||| |||||||| ||||||||| ||||| || ||| ||||||||||||| ||||||||| |||||| |
|
|
| T |
26539234 |
aagagtgcctttagggcattagttaagagaacaaacttagaaatattgtattgaaaaatgatgaaaattgatagatttgactttttaaaaattaaaaaaa |
26539135 |
T |
 |
| Q |
366 |
ttcctaaattcaatgcaaacttgtcattttttatttccttaactaatgcccttagggtacttgttagcataaccc |
440 |
Q |
| |
|
|| | |||||||||||||||| |||||| |||||||||||| |||||||||| ||| |||| |||||||| |
|
|
| T |
26539134 |
ttgttgaattcaatgcaaacttactatttttagtttccttaactagtgcccttaggacactagttaacataaccc |
26539060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 259 - 409
Target Start/End: Complemental strand, 32251481 - 32251332
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||||||||||||| | ||| | ||||||||||||||||||| |||||| |||||||||| |||||||| |||||||| ||| |||||||| ||||| |
|
|
| T |
32251481 |
aaatgttaaagagtgcccttatggcattggttaagaagacaaacttagaagtgttgtattggtaaatggtgaaaagtgatggatctgactttt-aaaagt |
32251383 |
T |
 |
| Q |
359 |
taaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaact |
409 |
Q |
| |
|
||||||||| | |||||||| ||||| | ||||||| ||||||||||| |
|
|
| T |
32251382 |
taaaaaattgttgaattcaatacaaacctactattttttgtttccttaact |
32251332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 410
Target Start/End: Original strand, 31490664 - 31490821
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatgg-----tggaaagtgatagatttgactttta |
352 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||| |||||| ||| ||||| ||||||| ||||||| || |||||||||||||| | ||||| |
|
|
| T |
31490664 |
gaaatgttaaagagtgcccttaggacattggttaagaggacaaacttaaaaatgatgtattgggaaatggtgaaatgaaaagtgatagatttaattttta |
31490763 |
T |
 |
| Q |
353 |
aaaagataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaacta |
410 |
Q |
| |
|
||||| ||||||||| | |||||||| ||||||| |||||| |||||||||||| |
|
|
| T |
31490764 |
aaaagttaaaaaattgttgaattcaatacaaacttactatttttagtttccttaacta |
31490821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 28014758 - 28014636
Alignment:
| Q |
265 |
taaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaa |
364 |
Q |
| |
|
||||||||| ||||||| |||||||||||| | |||||||||||| |||||||| ||||||||| ||| |||| |||||||||| ||||| ||||| |
|
|
| T |
28014758 |
taaagagtgcctttagggcattggttaagagggtaaaattagaaatattgtattgggaaatggtgaaaaatgatgagtttgactttttaaaagttaaaat |
28014659 |
T |
 |
| Q |
365 |
attcctaaattcaatgcaaactt |
387 |
Q |
| |
|
||| | ||| |||||||||||| |
|
|
| T |
28014658 |
attgttgaatccaatgcaaactt |
28014636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 412
Target Start/End: Original strand, 19647339 - 19647495
Alignment:
| Q |
256 |
aggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaa |
355 |
Q |
| |
|
|||||||| |||| |||| | ||||||||| | |||||| || ||| | |||||| ||||||||| |||| | ||| ||||| |||||| ||| ||| |
|
|
| T |
19647339 |
aggaaatgctaaaaagtgcccttaggacatcgattaagaggataaattgagaaatattgtattgaaaaatattaaaaattgatatatttgattttcgaaa |
19647438 |
T |
 |
| Q |
356 |
agataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaat |
412 |
Q |
| |
|
|| |||||||| ||||||||||||||| || ||| |||| |||||||||||||| |
|
|
| T |
19647439 |
agttaaaaaatggttaaattcaatgcaaatttttcaattttggtttccttaactaat |
19647495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 27127511 - 27127585
Alignment:
| Q |
283 |
cattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaag |
357 |
Q |
| |
|
||||| |||||| || |||| ||||||| |||||||||||||||||| ||| |||| |||| |||||| ||||| |
|
|
| T |
27127511 |
cattgtttaagatgataaaaatagaaatattgtattgagaaatggtgaaaaatgatgaatttaactttttaaaag |
27127585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 21427391 - 21427315
Alignment:
| Q |
281 |
gacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaag |
357 |
Q |
| |
|
|||||||||||||| ||||| ||| ||||| ||||||| ||||| ||| |||||||| ||||| || ||| ||||| |
|
|
| T |
21427391 |
gacattggttaagagaacaaatttataaatgatgtattgggaaatagtgaaaagtgattgatttaacattttaaaag |
21427315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 24288594 - 24288508
Alignment:
| Q |
281 |
gacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaatt |
367 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| || |||||| |
|
|
| T |
24288594 |
gacattggttaagaggacaaacttagaaatgttgtattgagaaatggtgaaaagtgatagatttaactttttaaaagttacaaaatt |
24288508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 281 - 367
Target Start/End: Original strand, 24373627 - 24373713
Alignment:
| Q |
281 |
gacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaatt |
367 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| || |||||| |
|
|
| T |
24373627 |
gacattggttaagaggacaaacttagaaatgttgtattgagaaatggtgaaaagtgatagatttaactttttaaaagttacaaaatt |
24373713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 6061594 - 6061499
Alignment:
| Q |
256 |
aggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgactttt |
351 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||| | ||| ||||||||||||||||| |||| |||| ||||||||| ||||||||||| |
|
|
| T |
6061594 |
aggaaatgctaaagaatgtctttaggacattggttaagatggaaaatttagaaatgttgtattgggaaaaggtgaaaagtgatacatttgactttt |
6061499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 367
Target Start/End: Original strand, 12349542 - 12349632
Alignment:
| Q |
277 |
ttaggacattggttaagaagacaaaattagaaatgttgtat-tgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaatt |
367 |
Q |
| |
|
||||| |||||||||||| |||||| ||| ||||||||||| ||| |||||||| ||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
12349542 |
ttagggcattggttaagaggacaaatttaaaaatgttgtatatga-aaatggtgaaaagtgatagatttgactttttaaaagttaaaaaatt |
12349632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 39076712 - 39076630
Alignment:
| Q |
285 |
ttggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaatt |
367 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||| ||| |||||| ||| | |||| ||||| ||||||||| |
|
|
| T |
39076712 |
ttggttaagagaacaaatttagaaatgttgtattgagaaatggtaaaaaatgataggtttaattttttaaaagttaaaaaatt |
39076630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 365
Target Start/End: Original strand, 41871851 - 41871964
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtg-----gaaagtgatagatttgactttt |
351 |
Q |
| |
|
|||| |||||||||||||| | ||||||||||||||| ||||| ||| |||||||||||| | |||||||| ||||||||| ||||||||||| |
|
|
| T |
41871851 |
ggaagtgttaaagagtgtccattggacattggttaagagcacaaatttaaaaatgttgtattaaaaaatggtgaaaattaaagtgatacatttgactttt |
41871950 |
T |
 |
| Q |
352 |
aaaaagataaaaaa |
365 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
41871951 |
gaaaagttaaaaaa |
41871964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 678555 - 678471
Alignment:
| Q |
283 |
cattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaatt |
367 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||||||||| |||||||| ||||| || |||| || ||| ||||| ||||||||| |
|
|
| T |
678555 |
cattggttaagaggacaaaaatagaattgttgtattggaaaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaatt |
678471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 4293811 - 4293878
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatg |
326 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||| | || |||| ||| ||| ||||||||||||||| |
|
|
| T |
4293811 |
aaatgttaaagagtgttcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaatg |
4293878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 422
Target Start/End: Original strand, 12349662 - 12349725
Alignment:
| Q |
359 |
taaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgcccttaggg |
422 |
Q |
| |
|
||||||||| | |||||| ||||||||| ||||||||||||||||||||| |||||| |||| |
|
|
| T |
12349662 |
taaaaaattgttgaattcattgcaaacttaccattttttatttccttaactagtgccctgaggg |
12349725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 436
Target Start/End: Complemental strand, 17168807 - 17168628
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||| ||||||||| ||| | ||||||||||||||| | || ||||||| ||| ||||| ||| |||| ||| |||| ||||||||||| |||| |
|
|
| T |
17168807 |
ggaaatgctaaagagtgcacttaaggcattggttaagaagatacaaatagaaatattgcattgaaaaacggtgaaaaatgatgaatttgactttttaaaa |
17168708 |
T |
 |
| Q |
357 |
gataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaatgcccttagggtacttgttagcata |
436 |
Q |
| |
|
||||| ||| || ||||| ||||||| | | |||| || ||||||| | ||| ||||||| ||||||||||||| |
|
|
| T |
17168707 |
tttaaaatattgctgaattccttgcaaacctactacttttggttcccttaacaagtgcgcttagggcacttgttagcata |
17168628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 384
Target Start/End: Original strand, 28599633 - 28599759
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaag |
357 |
Q |
| |
|
|||||||||| ||||| |||||| |||||||||||| ||| | || |||| || ||||| |||| ||| ||| ||||| ||||||||||| ||||| |
|
|
| T |
28599633 |
gaaatgttaacaagtgtttttagggcattggttaagagcacatgaataaaaatattatattggaaaatagtgaaaaatgataaatttgactttttaaaag |
28599732 |
T |
 |
| Q |
358 |
ataaaaaattcctaaattcaatgcaaa |
384 |
Q |
| |
|
|||||| || | ||||||||||||| |
|
|
| T |
28599733 |
ttaaaaatttattgaattcaatgcaaa |
28599759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 412
Target Start/End: Complemental strand, 41084930 - 41084774
Alignment:
| Q |
256 |
aggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaa |
355 |
Q |
| |
|
||||||||| |||||||| |||||| ||||| |||| | |||||| ||| ||| |||||||||||||| || ||| |||||||||| |||||| ||| |
|
|
| T |
41084930 |
aggaaatgtcaaagagtgcttttagggcattgattaaaaggacaaatttaaaaaaattgtattgagaaataatgaaaattgatagatttaactttttaaa |
41084831 |
T |
 |
| Q |
356 |
agataaaaaattcctaaattcaatgcaaacttgtcattttttatttccttaactaat |
412 |
Q |
| |
|
|| ||||||||| | || ||||| ||||||| |||||||||||||||| ||||||| |
|
|
| T |
41084830 |
agttaaaaaattattgaactcaatacaaacttatcattttttatttcctcaactaat |
41084774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 307 - 440
Target Start/End: Complemental strand, 5543127 - 5542994
Alignment:
| Q |
307 |
aaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaaacttgtcattttttatttcctta |
406 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||| | ||||||| ||||||||| |||||| ||| |||| |
|
|
| T |
5543127 |
aaatattgtattgagaaatggtgaaaagtgatatatttgactttttaaaagttaaaaaattgttgaattcaacgcaaacttgctatttttagttttctta |
5543028 |
T |
 |
| Q |
407 |
actaatgcccttagggtacttgttagcataaccc |
440 |
Q |
| |
|
|||||| ||| | || ||| ||||||||||||| |
|
|
| T |
5543027 |
actaatatcctaacggcactggttagcataaccc |
5542994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 49069685 - 49069587
Alignment:
| Q |
258 |
gaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaa |
356 |
Q |
| |
|
||||||||||||||||||||| || |||||| |||||||| |||| ||||||| | ||||||| |||||||| ||||||||| || | |||||| |||| |
|
|
| T |
49069685 |
gaaatgttaaagagtgtctttggggcattggataagaagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatctaactttttaaaa |
49069587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 410
Target Start/End: Complemental strand, 49045366 - 49045263
Alignment:
| Q |
307 |
aaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgcaaacttgtcattttttatttcctta |
406 |
Q |
| |
|
|||||||||||| ||||||||| ||||| ||| |||||||||| ||||| ||||||||| | |||||||||||||||| |||||||| ||| ||| |
|
|
| T |
49045366 |
aaatgttgtattaggaaatggtgaaaagtattagttttgacttttgaaaagttaaaaaattatttaattcaatgcaaacttaccattttttgttttcttc |
49045267 |
T |
 |
| Q |
407 |
acta |
410 |
Q |
| |
|
|||| |
|
|
| T |
49045266 |
acta |
49045263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 367
Target Start/End: Original strand, 1566930 - 1567020
Alignment:
| Q |
277 |
ttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaatt |
367 |
Q |
| |
|
|||||||||||||||||| || ||| ||| ||| ||||||||||||| |||| ||||||||| |||||| |||| |||| ||||||||| |
|
|
| T |
1566930 |
ttaggacattggttaagatgataaatttataaaaattgtattgagaaacggtgaaaagtgataaatttgatttttgaaaaactaaaaaatt |
1567020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 37848303 - 37848375
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtg |
329 |
Q |
| |
|
||||||||||||||||| | ||||| |||||||||||| |||||| ||| |||| |||||||| |||||||| |
|
|
| T |
37848303 |
ggaaatgttaaagagtgcccttagggcattggttaagaggacaaacttaaaaatattgtattggaaaatggtg |
37848375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 363
Target Start/End: Original strand, 40774222 - 40774326
Alignment:
| Q |
259 |
aaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaaga |
358 |
Q |
| |
|
||||||||||||||||| || |||||||| ||||||||| | || ||||||| ||| ||||| ||||| || ||| |||| |||| |||||| ||||| |
|
|
| T |
40774222 |
aaatgttaaagagtgtcattgggacattgattaagaagatacaaatagaaatattgcattgaaaaatgatgaaaattgatgaatttaactttttaaaagt |
40774321 |
T |
 |
| Q |
359 |
taaaa |
363 |
Q |
| |
|
||||| |
|
|
| T |
40774322 |
taaaa |
40774326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 27236813 - 27236914
Alignment:
| Q |
283 |
cattggttaagaagacaaaattagaaatgttgtattgagaaatggtggaaagtgatagatttgacttttaaaaagataaaaaattcctaaattcaatgca |
382 |
Q |
| |
|
|||||||||||| |||||| ||| |||| ||||| || ||||| || ||| ||||||||||||||| | ||||| ||||||||| | |||||||| || |
|
|
| T |
27236813 |
cattggttaagaggacaaacttataaatattgtaatggaaaatgatgaaaaatgatagatttgacttcttaaaagttaaaaaattgttgaattcaataca |
27236912 |
T |
 |
| Q |
383 |
aa |
384 |
Q |
| |
|
|| |
|
|
| T |
27236913 |
aa |
27236914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 33901388 - 33901345
Alignment:
| Q |
250 |
attaataggaaa-tgttaaagagtgtctttaggacattggttaa |
292 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
33901388 |
attaataggaaaatgctaaagagtgtctttaggacattggttaa |
33901345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 9887278 - 9887216
Alignment:
| Q |
257 |
ggaaatgttaaagagtgtctttaggacattggttaagaagacaaaattagaaatgttgtattg |
319 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||| || |||| ||||||| ||| |||| |
|
|
| T |
9887278 |
ggaaatgttaaagagtacccttaggacattggttaagaggataaaaatagaaatattgcattg |
9887216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 46204202 - 46204158
Alignment:
| Q |
284 |
attggttaagaagacaaaattagaaatgttgtattgagaaatggt |
328 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||| ||||||| |
|
|
| T |
46204202 |
attggttaagaagacaaatttagaaatgccgtattgaaaaatggt |
46204158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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