View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9829_low_14 (Length: 323)
Name: NF9829_low_14
Description: NF9829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9829_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 37 - 313
Target Start/End: Original strand, 9255398 - 9255677
Alignment:
| Q |
37 |
ggaagaagataaaatgaga--gtgattgaaagaagagtaattggagggtgaaggagggaatgatatgaaatgagacatagacaaacttttatggtgtcgc |
134 |
Q |
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| T |
9255398 |
ggaagaagataaaatgagagagtgattgaaagaatagtaattggagggtgaaggagggagtgatatgaaatgaaacatagacacgtttttatggtatcgc |
9255497 |
T |
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| Q |
135 |
ttgatctatgtagtcgaacttacttagcggcgggataaaacttggttgttgttgtacgatgataaatatg-aaaaacaattataaaatttatgagttagt |
233 |
Q |
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||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
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| T |
9255498 |
ttgatctatgtagtcaaacttacttagcggcgggataaaatttggttgttgttgtacgatgataaatgtgaaaaaacaattataaaatttatgagttagt |
9255597 |
T |
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| Q |
234 |
atctataaataacttttaaaataacaaataaaatgaaacataagggtgcatacaaatacaatcttcattattttcctttg |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9255598 |
atctataaataacttttaaaataacaaataaaatgaaacataagggtgcatacaaatacaatcttcattattttcctttg |
9255677 |
T |
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