View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9829_low_20 (Length: 261)
Name: NF9829_low_20
Description: NF9829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9829_low_20 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 22645073 - 22644851
Alignment:
| Q |
18 |
aaatcgaatgccaagacagaaatacaacaaggagtttcaccaatccacacacaatcagaattgaaaatgccaaatcttcctggataacgtggagcataat |
117 |
Q |
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| T |
22645073 |
aaatcgaatgccaagacagaaatacaactaggagtttcaccaatccacacacaatcagaattgaaaatgccaaatcttcctggataacgtggagcataat |
22644974 |
T |
|
| Q |
118 |
acaagaagtctaacatgtataaactatagactataaaagctagaaaataaaagattgcagtaatccaatatagagaatcagattcggcaaataaatttaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22644973 |
acaagaagtctaacatgtataaactatagactataaaagctagaaaataaaagattgcagtaatccaatatagagaatcagattcggcaaataaatttaa |
22644874 |
T |
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| Q |
218 |
aaagagtatctcccttacaaatt |
240 |
Q |
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||||||||||||||||||||||| |
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| T |
22644873 |
aaagagtatctcccttacaaatt |
22644851 |
T |
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