View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9829_low_26 (Length: 242)
Name: NF9829_low_26
Description: NF9829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9829_low_26 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 41854457 - 41854216
Alignment:
| Q |
1 |
ttcacagatgcagatgatattatcttcctatgaaaaggctttacaaattttaagatgtaatgaatcaacttctaagtcacagccagtgactccagtaata |
100 |
Q |
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| T |
41854457 |
ttcacagatgcagatgatattatcttcctatgaaaaggctttacaaattttaagatgtaatgaatcaacttctaagtcacagccagtgactccagtaata |
41854358 |
T |
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| Q |
101 |
acttcgttaccggaatccccagtgtctaccaatgggagtcctctgagcgaggactttgatgggaccttccaagatcaccaagaagttaaaaataaatcaa |
200 |
Q |
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| T |
41854357 |
acttcgttaccggaatccccagtgtctaccaatgggagtcctctgagcgaggactttgatgggaccttccaagatcaccaagaagttaaaaataaatcaa |
41854258 |
T |
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| Q |
201 |
agaaaaggtaaatttattagacacacttggtaacagttttat |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
41854257 |
agaaaaggtaaatttattagacacacttggtaacagttttat |
41854216 |
T |
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