View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9831_low_6 (Length: 375)

Name: NF9831_low_6
Description: NF9831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9831_low_6
NF9831_low_6
[»] chr2 (30 HSPs)
chr2 (1-358)||(20005904-20006269)
chr2 (1-315)||(45535724-45536044)
chr2 (1-355)||(45528299-45528650)
chr2 (1-280)||(19647074-19647352)
chr2 (64-218)||(28652548-28652702)
chr2 (72-172)||(25584267-25584367)
chr2 (149-221)||(18388317-18388391)
chr2 (62-129)||(12626421-12626488)
chr2 (160-280)||(22501700-22501821)
chr2 (160-280)||(22509634-22509755)
chr2 (160-218)||(24884262-24884322)
chr2 (64-172)||(21335262-21335371)
chr2 (160-283)||(1383743-1383867)
chr2 (68-128)||(14179728-14179788)
chr2 (64-163)||(21315472-21315572)
chr2 (68-105)||(14183466-14183503)
chr2 (171-215)||(28345140-28345184)
chr2 (236-309)||(36734620-36734693)
chr2 (64-218)||(149497-149657)
chr2 (69-129)||(23968624-23968684)
chr2 (64-120)||(24918930-24918986)
chr2 (67-98)||(25046140-25046171)
chr2 (66-120)||(22106255-22106309)
chr2 (67-172)||(23610573-23610679)
chr2 (72-129)||(24718010-24718067)
chr2 (64-129)||(36734447-36734511)
chr2 (64-120)||(18388186-18388242)
chr2 (68-120)||(23706346-23706398)
chr2 (68-120)||(23932250-23932302)
chr2 (68-120)||(32214250-32214302)
[»] chr7 (44 HSPs)
chr7 (1-344)||(33060208-33060557)
chr7 (8-278)||(42565772-42566042)
chr7 (1-276)||(21661099-21661377)
chr7 (1-86)||(33556038-33556123)
chr7 (160-280)||(14274063-14274184)
chr7 (64-215)||(37539352-37539504)
chr7 (67-172)||(15119306-15119411)
chr7 (67-168)||(43745607-43745709)
chr7 (64-129)||(14318063-14318128)
chr7 (64-172)||(15575645-15575754)
chr7 (139-191)||(13744744-13744796)
chr7 (67-172)||(4690662-4690768)
chr7 (64-161)||(19195570-19195667)
chr7 (64-169)||(20252178-20252284)
chr7 (64-177)||(47095394-47095508)
chr7 (68-172)||(14160856-14160960)
chr7 (82-172)||(9743093-9743183)
chr7 (64-161)||(708425-708523)
chr7 (237-299)||(708690-708752)
chr7 (64-98)||(36704567-36704601)
chr7 (65-129)||(16250219-16250284)
chr7 (67-142)||(8513752-8513828)
chr7 (171-280)||(12754769-12754877)
chr7 (148-219)||(25943167-25943238)
chr7 (161-218)||(47974983-47975042)
chr7 (67-129)||(8488093-8488156)
chr7 (148-218)||(8930847-8930918)
chr7 (67-98)||(10658850-10658881)
chr7 (236-299)||(25942293-25942356)
chr7 (64-130)||(38299737-38299804)
chr7 (66-120)||(5294430-5294484)
chr7 (66-120)||(5295603-5295657)
chr7 (66-120)||(5296776-5296830)
chr7 (236-280)||(4325937-4325981)
chr7 (68-120)||(8941264-8941316)
chr7 (64-120)||(10500731-10500787)
chr7 (68-120)||(11392516-11392568)
chr7 (236-280)||(14105594-14105638)
chr7 (64-120)||(14156388-14156444)
chr7 (68-120)||(14269084-14269136)
chr7 (236-280)||(14415611-14415655)
chr7 (64-92)||(15095633-15095661)
chr7 (171-215)||(19195096-19195140)
chr7 (236-327)||(29052350-29052442)
[»] chr1 (37 HSPs)
chr1 (26-357)||(21187992-21188329)
chr1 (1-276)||(20707990-20708268)
chr1 (65-276)||(39061163-39061375)
chr1 (160-280)||(44822221-44822342)
chr1 (149-221)||(22350567-22350641)
chr1 (64-172)||(28476730-28476839)
chr1 (67-142)||(14792562-14792637)
chr1 (67-172)||(38887086-38887191)
chr1 (68-129)||(41225454-41225515)
chr1 (68-129)||(41226707-41226768)
chr1 (55-218)||(34392667-34392833)
chr1 (67-217)||(18121505-18121656)
chr1 (67-172)||(24007224-24007330)
chr1 (107-172)||(12710814-12710879)
chr1 (67-157)||(8275988-8276079)
chr1 (64-218)||(8306505-8306662)
chr1 (64-157)||(38056668-38056762)
chr1 (41-113)||(7703129-7703201)
chr1 (64-120)||(22050346-22050402)
chr1 (171-218)||(7052117-7052164)
chr1 (71-142)||(21243761-21243832)
chr1 (171-276)||(22823315-22823419)
chr1 (67-98)||(24727389-24727420)
chr1 (67-142)||(44892427-44892502)
chr1 (236-283)||(45574186-45574233)
chr1 (107-177)||(24719550-24719620)
chr1 (293-359)||(34392519-34392585)
chr1 (64-101)||(11808187-11808224)
chr1 (68-129)||(16401903-16401963)
chr1 (180-212)||(7703020-7703052)
chr1 (68-143)||(22145666-22145742)
chr1 (64-92)||(22350744-22350772)
chr1 (236-280)||(24723628-24723672)
chr1 (64-120)||(29299031-29299087)
chr1 (68-120)||(43543493-43543545)
chr1 (68-120)||(46560078-46560130)
chr1 (64-143)||(50544848-50544928)
[»] scaffold1800 (1 HSPs)
scaffold1800 (1-280)||(446-726)
[»] chr4 (33 HSPs)
chr4 (1-328)||(14477416-14477750)
chr4 (27-280)||(18462863-18463116)
chr4 (38-264)||(13164989-13165213)
chr4 (1-219)||(14353729-14353951)
chr4 (67-216)||(26921508-26921653)
chr4 (64-172)||(25513798-25513907)
chr4 (64-157)||(9638972-9639066)
chr4 (64-172)||(12623264-12623372)
chr4 (64-172)||(14631082-14631191)
chr4 (64-172)||(19565914-19566022)
chr4 (64-160)||(16296897-16296994)
chr4 (64-172)||(40230254-40230362)
chr4 (148-218)||(9622388-9622459)
chr4 (82-172)||(45314097-45314188)
chr4 (67-172)||(2424386-2424492)
chr4 (67-172)||(26446154-26446260)
chr4 (64-172)||(33243290-33243398)
chr4 (64-129)||(44023599-44023664)
chr4 (67-142)||(46741177-46741252)
chr4 (236-280)||(13043936-13043980)
chr4 (171-280)||(19434763-19434871)
chr4 (67-98)||(15613112-15613143)
chr4 (148-218)||(16296772-16296843)
chr4 (67-98)||(51993583-51993614)
chr4 (66-120)||(363163-363217)
chr4 (68-121)||(19858402-19858455)
chr4 (64-105)||(26014299-26014340)
chr4 (68-120)||(1836734-1836786)
chr4 (64-120)||(3515797-3515853)
chr4 (68-120)||(15489469-15489521)
chr4 (68-120)||(19617395-19617447)
chr4 (236-280)||(28386085-28386129)
chr4 (171-219)||(45314241-45314289)
[»] chr3 (37 HSPs)
chr3 (26-358)||(3160585-3160916)
chr3 (8-280)||(48631172-48631443)
chr3 (1-218)||(12150881-12151098)
chr3 (1-279)||(6003025-6003306)
chr3 (10-280)||(12154972-12155239)
chr3 (64-213)||(50350812-50350963)
chr3 (64-217)||(21845648-21845801)
chr3 (121-191)||(50755355-50755422)
chr3 (64-172)||(17208471-17208580)
chr3 (64-177)||(14520388-14520502)
chr3 (160-280)||(13522440-13522560)
chr3 (64-172)||(53646055-53646163)
chr3 (139-188)||(13520318-13520367)
chr3 (64-206)||(29907549-29907695)
chr3 (64-206)||(29948715-29948861)
chr3 (64-206)||(29997869-29998015)
chr3 (75-172)||(54330314-54330411)
chr3 (160-218)||(6805018-6805078)
chr3 (148-218)||(3527236-3527306)
chr3 (64-98)||(11563747-11563781)
chr3 (64-157)||(14641544-14641638)
chr3 (67-120)||(12119184-12119237)
chr3 (160-218)||(24177860-24177920)
chr3 (236-280)||(42369-42413)
chr3 (68-120)||(10379929-10379981)
chr3 (54-129)||(12917292-12917368)
chr3 (288-352)||(12917540-12917604)
chr3 (67-142)||(14152398-14152474)
chr3 (68-120)||(20629512-20629564)
chr3 (54-129)||(22841265-22841341)
chr3 (68-120)||(24514273-24514325)
chr3 (294-358)||(25201891-25201954)
chr3 (236-280)||(43549822-43549866)
chr3 (236-280)||(46722753-46722797)
chr3 (68-120)||(46823051-46823103)
chr3 (236-280)||(55291768-55291812)
chr3 (68-120)||(55318624-55318676)
[»] scaffold0092 (1 HSPs)
scaffold0092 (26-357)||(38400-38738)
[»] scaffold0337 (1 HSPs)
scaffold0337 (26-358)||(2961-3298)
[»] scaffold0021 (2 HSPs)
scaffold0021 (26-344)||(16876-17199)
scaffold0021 (26-344)||(26407-26730)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-328)||(28499-28832)
[»] scaffold0394 (1 HSPs)
scaffold0394 (1-264)||(7447-7709)
[»] scaffold1102 (1 HSPs)
scaffold1102 (1-219)||(1884-2104)
[»] scaffold0017 (3 HSPs)
scaffold0017 (25-275)||(23458-23708)
scaffold0017 (107-196)||(26651-26739)
scaffold0017 (160-219)||(26591-26652)
[»] scaffold0058 (1 HSPs)
scaffold0058 (26-358)||(59614-59952)
[»] chr6 (37 HSPs)
chr6 (1-218)||(18459207-18459425)
chr6 (107-355)||(24506155-24506409)
chr6 (54-218)||(1818853-1819018)
chr6 (1-173)||(31166187-31166361)
chr6 (1-276)||(3006804-3007082)
chr6 (95-277)||(18982255-18982439)
chr6 (64-211)||(13285656-13285804)
chr6 (64-218)||(25601326-25601477)
chr6 (64-215)||(35057448-35057600)
chr6 (171-280)||(18585519-18585627)
chr6 (67-129)||(31734698-31734760)
chr6 (67-172)||(7217243-7217347)
chr6 (64-163)||(25921957-25922057)
chr6 (64-129)||(23431443-23431508)
chr6 (244-357)||(14993563-14993683)
chr6 (67-172)||(15998836-15998942)
chr6 (64-172)||(32259793-32259901)
chr6 (67-142)||(18455072-18455147)
chr6 (67-163)||(21683074-21683170)
chr6 (67-163)||(22557204-22557300)
chr6 (64-161)||(34140452-34140548)
chr6 (68-120)||(23993019-23993071)
chr6 (67-98)||(12041619-12041650)
chr6 (64-161)||(34153068-34153164)
chr6 (236-280)||(13765188-13765232)
chr6 (67-115)||(16246223-16246271)
chr6 (68-120)||(17027864-17027916)
chr6 (68-120)||(22783124-22783176)
chr6 (236-280)||(23956704-23956748)
chr6 (68-120)||(25536005-25536057)
chr6 (68-120)||(25689423-25689475)
chr6 (68-120)||(25721095-25721147)
chr6 (68-120)||(25753438-25753490)
chr6 (68-120)||(25755608-25755660)
chr6 (236-280)||(31021888-31021932)
chr6 (64-120)||(31629857-31629913)
chr6 (68-120)||(34963970-34964022)
[»] chr8 (46 HSPs)
chr8 (8-280)||(20516976-20517268)
chr8 (54-280)||(20879313-20879538)
chr8 (1-221)||(21678779-21678998)
chr8 (65-358)||(21676590-21676888)
chr8 (1-219)||(22708255-22708477)
chr8 (1-154)||(21676433-21676585)
chr8 (171-277)||(22344966-22345071)
chr8 (171-277)||(22356626-22356731)
chr8 (149-221)||(42265636-42265710)
chr8 (68-172)||(21514638-21514743)
chr8 (64-172)||(22474704-22474812)
chr8 (67-172)||(4380616-4380722)
chr8 (68-172)||(18816295-18816400)
chr8 (68-172)||(21579206-21579310)
chr8 (68-163)||(12037164-12037260)
chr8 (68-163)||(29762868-29762964)
chr8 (54-218)||(22610253-22610417)
chr8 (67-172)||(41680132-41680237)
chr8 (67-173)||(12577825-12577932)
chr8 (67-172)||(17978415-17978520)
chr8 (64-172)||(22208216-22208325)
chr8 (160-219)||(36305742-36305803)
chr8 (64-142)||(36405128-36405206)
chr8 (274-359)||(22610479-22610564)
chr8 (236-327)||(19880615-19880707)
chr8 (54-129)||(22483928-22484003)
chr8 (64-120)||(24049400-24049456)
chr8 (67-98)||(19700183-19700214)
chr8 (67-98)||(23419463-23419494)
chr8 (62-109)||(27471731-27471778)
chr8 (67-161)||(36732411-36732506)
chr8 (66-120)||(32810484-32810538)
chr8 (64-109)||(20457479-20457524)
chr8 (68-120)||(1326445-1326497)
chr8 (68-120)||(5852507-5852559)
chr8 (236-280)||(8413915-8413959)
chr8 (68-120)||(11361307-11361359)
chr8 (64-120)||(15202302-15202358)
chr8 (68-120)||(16412635-16412687)
chr8 (236-280)||(19882789-19882833)
chr8 (68-120)||(19897304-19897356)
chr8 (115-218)||(21697507-21697610)
chr8 (64-92)||(22317907-22317935)
chr8 (236-327)||(26454498-26454590)
chr8 (64-120)||(32122518-32122574)
chr8 (64-120)||(37609718-37609774)
[»] scaffold0165 (2 HSPs)
scaffold0165 (26-218)||(31831-32023)
scaffold0165 (68-130)||(32038-32100)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-172)||(40094-40268)
[»] chr5 (23 HSPs)
chr5 (1-125)||(21404080-21404204)
chr5 (54-218)||(21504040-21504205)
chr5 (160-280)||(17875897-17876018)
chr5 (64-157)||(14025803-14025897)
chr5 (64-172)||(18744821-18744930)
chr5 (67-218)||(1626917-1627069)
chr5 (72-217)||(21398800-21398948)
chr5 (64-161)||(16063709-16063807)
chr5 (67-172)||(26749979-26750084)
chr5 (67-172)||(26762350-26762455)
chr5 (160-218)||(30138174-30138234)
chr5 (171-218)||(31456752-31456799)
chr5 (68-172)||(23199207-23199312)
chr5 (64-161)||(6551286-6551384)
chr5 (71-129)||(8833209-8833267)
chr5 (68-172)||(8503888-8503992)
chr5 (274-358)||(20313029-20313114)
chr5 (171-218)||(36508847-36508894)
chr5 (68-120)||(2153952-2154004)
chr5 (68-120)||(17516290-17516342)
chr5 (236-280)||(27868741-27868785)
chr5 (68-120)||(29330763-29330815)
chr5 (236-280)||(33472730-33472774)
[»] scaffold0059 (1 HSPs)
scaffold0059 (64-191)||(49658-49785)
[»] scaffold0007 (6 HSPs)
scaffold0007 (112-280)||(18902-19072)
scaffold0007 (95-209)||(16602-16718)
scaffold0007 (140-273)||(158941-159074)
scaffold0007 (236-280)||(17422-17466)
scaffold0007 (64-128)||(18697-18762)
scaffold0007 (64-92)||(158818-158846)
[»] scaffold1939 (1 HSPs)
scaffold1939 (66-218)||(28-181)
[»] scaffold0125 (3 HSPs)
scaffold0125 (64-217)||(28454-28607)
scaffold0125 (1-219)||(18041-18264)
scaffold0125 (1-188)||(7157-7346)
[»] scaffold1434 (1 HSPs)
scaffold1434 (1-276)||(1290-1568)
[»] scaffold0180 (1 HSPs)
scaffold0180 (149-221)||(28456-28530)
[»] scaffold0630 (1 HSPs)
scaffold0630 (64-172)||(9011-9119)
[»] scaffold0116 (1 HSPs)
scaffold0116 (149-221)||(35591-35665)
[»] scaffold0261 (1 HSPs)
scaffold0261 (67-162)||(6419-6514)
[»] scaffold0230 (2 HSPs)
scaffold0230 (171-280)||(6898-7006)
scaffold0230 (68-120)||(22700-22752)
[»] scaffold0371 (1 HSPs)
scaffold0371 (67-172)||(10445-10550)
[»] scaffold1186 (1 HSPs)
scaffold1186 (64-172)||(1967-2076)
[»] scaffold0878 (1 HSPs)
scaffold0878 (64-172)||(3418-3527)
[»] scaffold0203 (1 HSPs)
scaffold0203 (64-172)||(17936-18045)
[»] scaffold0039 (1 HSPs)
scaffold0039 (67-128)||(9927-9988)
[»] scaffold0011 (1 HSPs)
scaffold0011 (64-129)||(33445-33510)
[»] scaffold0005 (1 HSPs)
scaffold0005 (64-172)||(186192-186301)
[»] scaffold0462 (2 HSPs)
scaffold0462 (120-215)||(1174-1270)
scaffold0462 (120-215)||(6680-6776)
[»] scaffold0401 (1 HSPs)
scaffold0401 (67-142)||(8799-8874)
[»] scaffold0308 (1 HSPs)
scaffold0308 (149-221)||(13291-13365)
[»] scaffold0516 (1 HSPs)
scaffold0516 (67-172)||(5304-5410)
[»] scaffold0439 (2 HSPs)
scaffold0439 (67-172)||(4369-4474)
scaffold0439 (171-280)||(12081-12188)
[»] scaffold0020 (1 HSPs)
scaffold0020 (67-172)||(174169-174274)
[»] scaffold0369 (1 HSPs)
scaffold0369 (64-172)||(15612-15720)
[»] scaffold0247 (1 HSPs)
scaffold0247 (68-205)||(990-1128)
[»] scaffold0205 (2 HSPs)
scaffold0205 (26-129)||(5574-5676)
scaffold0205 (294-358)||(5849-5913)
[»] scaffold0676 (1 HSPs)
scaffold0676 (64-161)||(2839-2937)
[»] scaffold0231 (1 HSPs)
scaffold0231 (64-172)||(17517-17626)
[»] scaffold0213 (2 HSPs)
scaffold0213 (64-172)||(19154-19263)
scaffold0213 (124-215)||(19019-19110)
[»] scaffold0063 (1 HSPs)
scaffold0063 (64-129)||(62709-62774)
[»] scaffold0061 (2 HSPs)
scaffold0061 (64-155)||(14582-14674)
scaffold0061 (64-155)||(23640-23732)
[»] scaffold0048 (1 HSPs)
scaffold0048 (67-123)||(56970-57026)
[»] scaffold0505 (1 HSPs)
scaffold0505 (68-161)||(4894-4988)
[»] scaffold0385 (1 HSPs)
scaffold0385 (67-172)||(293-398)
[»] scaffold0056 (1 HSPs)
scaffold0056 (67-172)||(18222-18328)
[»] scaffold0174 (1 HSPs)
scaffold0174 (64-128)||(5445-5510)
[»] scaffold0104 (2 HSPs)
scaffold0104 (148-189)||(14885-14926)
scaffold0104 (148-189)||(16905-16946)
[»] scaffold0026 (3 HSPs)
scaffold0026 (160-218)||(9926-9986)
scaffold0026 (161-218)||(22023-22082)
scaffold0026 (236-280)||(21962-22006)
[»] scaffold0574 (1 HSPs)
scaffold0574 (64-120)||(7241-7297)
[»] scaffold0023 (1 HSPs)
scaffold0023 (236-280)||(163175-163219)
[»] scaffold0671 (1 HSPs)
scaffold0671 (67-98)||(4962-4993)
[»] scaffold0364 (1 HSPs)
scaffold0364 (236-283)||(8002-8049)
[»] scaffold0077 (1 HSPs)
scaffold0077 (67-98)||(5972-6003)
[»] scaffold0035 (3 HSPs)
scaffold0035 (54-129)||(43773-43847)
scaffold0035 (68-120)||(107265-107317)
scaffold0035 (68-120)||(115766-115818)
[»] scaffold0002 (1 HSPs)
scaffold0002 (67-98)||(398584-398615)
[»] scaffold0594 (1 HSPs)
scaffold0594 (64-129)||(2237-2303)
[»] scaffold0359 (1 HSPs)
scaffold0359 (66-120)||(16333-16387)
[»] scaffold0220 (1 HSPs)
scaffold0220 (64-157)||(13911-14005)
[»] scaffold0149 (2 HSPs)
scaffold0149 (152-218)||(21441-21509)
scaffold0149 (68-120)||(34286-34338)
[»] scaffold1792 (1 HSPs)
scaffold1792 (68-120)||(1148-1200)
[»] scaffold0711 (1 HSPs)
scaffold0711 (68-120)||(6897-6949)
[»] scaffold0411 (1 HSPs)
scaffold0411 (64-92)||(13413-13441)
[»] scaffold0328 (1 HSPs)
scaffold0328 (64-157)||(18636-18731)
[»] scaffold0322 (1 HSPs)
scaffold0322 (68-120)||(18727-18779)
[»] scaffold0297 (1 HSPs)
scaffold0297 (68-120)||(2918-2970)
[»] scaffold0191 (1 HSPs)
scaffold0191 (68-120)||(3610-3662)
[»] scaffold0175 (1 HSPs)
scaffold0175 (64-92)||(8670-8698)
[»] scaffold0040 (1 HSPs)
scaffold0040 (68-120)||(20634-20686)
[»] scaffold0031 (1 HSPs)
scaffold0031 (293-357)||(127577-127641)
[»] scaffold0004 (1 HSPs)
scaffold0004 (66-129)||(66070-66134)
[»] scaffold0001 (2 HSPs)
scaffold0001 (236-280)||(169281-169325)
scaffold0001 (236-280)||(176634-176678)


Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 20005904 - 20006269
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  20005904 aagtcagagaagagaagagctttgtgagaagaagggaaaacttgtagaattcaaaatttaaccaatctaaggtaagggtgggactagccttctttaatca 20006003  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    ||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  20006004 tgagtctataattctgaaaaagggtttaattttgttgttgttaataattttgatgttatagaagttaggtttgaattgcaatttgattgttgaaagtgta 20006103  T
Q  201 ggtaatccaatgaattaatat-nnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattg 292  Q
    ||||||| |||||||||||||        |||| | || |||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  20006104 ggtaatcgaatgaattaatataaaaaaaatgatgttcatgttgtagaataacaataggtaatgtttcctatcaaatttgggatttgggtagttgtaattg 20006203  T
Q  293 gggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgagtga 358  Q
    ||||||| | ||||||| |||||| ||||||||||||||||| |||| |||| ||||| |||||||    
T  20006204 gggtttttgagtgaaaattggtttctgcccgtagagctatctatcatcgctcgccacgacgagtga 20006269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 45536044 - 45535724
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45536044 aagtcagagaagagaagagctttgtgagaagaagggaaagcttgtagaattcagaatttaaccaatctaaggtaagggtgggactaaccttctttaatca 45535945  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
     |||||||||||||| |||||||||||||| |||| | ||||||||||| || |||||||||||||||| || |||||||||||||||||| ||||||||    
T  45535944 cgagtctataattctgaaaaagggtttaatcttgttgttgttgataattctgttgttatagaagttaggtttaaattgcaatttgattgttgaaagtgta 45535845  T
Q  201 ggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattgg 293  Q
    |||||||||||||||||| ||       |||| | ||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||    
T  45535844 ggtaatccaatgaattaacat-aaaaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatttgggtagttgtaattgg 45535746  T
Q  294 ggttttggggtgaaaactggtt 315  Q
    || ||| ||||| |||||||||    
T  45535745 ggattttgggtggaaactggtt 45535724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 355
Target Start/End: Complemental strand, 45528650 - 45528299
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||         |    
T  45528650 aagtcagagaagagaagagctttgtgagaagaagggaaagcttgtagaattcagaatttaaccaatctaaggtaagggtgggactaacct---------a 45528560  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    ||||||||||||||| |||||  ||||||| |||| | ||||||||||| || |||||||||||||||| || |||||||||||||||||| ||||||||    
T  45528559 tgagtctataattctgaaaaaatgtttaatcttgttgttgttgataattctgttgttatagaagttaggtttaaattgcaatttgattgttgaaagtgta 45528460  T
Q  201 ggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatc-------aaatttgggtagttgtaattgg 293  Q
     |||||| |||||||||| ||       |||| | |||||| |||||||||||||||||||||||||| ||       ||||||||||||||||||||||    
T  45528459 tgtaatcaaatgaattaacat-taaaattgatgttcaggttatagaataacaataggtaatgtttcctgtcaaatttgaaatttgggtagttgtaattgg 45528361  T
Q  294 ggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgag 355  Q
    |||||| ||||| ||| |||||| ||||||||||||||||||||||  ||| ||||||||||    
T  45528360 ggtttttgggtggaaattggtttctgcccgtagagctatctgtcatcactcgccacggcgag 45528299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 19647352 - 19647074
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||| ||||| |||||||||||||||||||    
T  19647352 aagtcagagaagagaagagctttatgagaagaagggaaagcttgtagaattcagagtttaaccaatctaaggtatgggtgagactaaccttctttaatca 19647253  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    | ||| ||||||||| |||||||||||||| |||||| |||| ||| |||||||  |||||||||||||||| |||||||| ||||||||| ||| ||||    
T  19647252 taagtatataattctgaaaaagggtttaatcttgtagttgttaatagttttgattgtatagaagttagggttaaattgcaaattgattgttgaaaatgta 19647153  T
Q  201 ggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||||| ||       |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  19647152 ggtaatccaatgaattaacat-aagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 19647074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 28652548 - 28652702
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggttta-attttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||||||||| |||||||| ||| | ||||||| ||||||||||||   ||||||| ||||| || |||||||||||||||    
T  28652548 aatctaaggtaagggtgggactaaccttcattaatcataagtatgtaattctgaaaaagggtttagcctttgtagttgttgttagttttgatgttataga 28652647  T
Q  163 agttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    | ||||||||  |||| ||||| ||||||||||| |||||||||||||||||||||    
T  28652648 aattagggttagattg-aatttaattgttaaaagagtaggtaatccaatgaattaa 28652702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 25584267 - 25584367
Alignment:
Q  72 gtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggt 171  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||  |||| | || ||||| ||||||||||||||||||||||||    
T  25584267 gtaagggtgggaataaccttctttaatcatgagtatataattctgaaaaagggtttaaccttgtcgttgatgatagttttgatgttatagaagttagggt 25584366  T
Q  172 t 172  Q
    |    
T  25584367 t 25584367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 18388317 - 18388391
Alignment:
Q  149 tttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatat 221  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||||    
T  18388317 tttgatgttatagaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaatccaatgaattaatat 18388391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 12626421 - 12626488
Alignment:
Q  62 caaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||| |||||||||||||    
T  12626421 caaatgtaaggtaagggtgggactaaccttcattaatcataagtgtataattctgaaaaagggtttaa 12626488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 280
Target Start/End: Complemental strand, 22501821 - 22501700
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaatagg 257  Q
    |||||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||| ||       |||| | || ||||| ||||||||||| |    
T  22501821 agaagttagggttttgaattgcaatttgtttgttgaaagtgtaggtaatccaatgaattaacat-atgaattgatgttcaagttgtggaataacaatatg 22501723  T
Q  258 taatgtttcctatcaaatttggg 280  Q
    | ||||||| |||||||||||||    
T  22501722 tgatgtttcttatcaaatttggg 22501700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 280
Target Start/End: Complemental strand, 22509755 - 22509634
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaatagg 257  Q
    |||||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||| ||       |||| | || ||||| ||||||||||| |    
T  22509755 agaagttagggttttgaattgcaatttgtttgttgaaagtgtaggtaatccaatgaattaacat-atgaattgatgttcaagttgtggaataacaatatg 22509657  T
Q  258 taatgtttcctatcaaatttggg 280  Q
    | ||||||| |||||||||||||    
T  22509656 tgatgtttcttatcaaatttggg 22509634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 24884322 - 24884262
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  24884322 agaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 24884262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 21335262 - 21335371
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||  || |||||||||||||||    
T  21335262 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttataga 21335361  T
Q  163 agttagggtt 172  Q
    | ||| ||||    
T  21335362 aattatggtt 21335371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 1383743 - 1383867
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaatagg 257  Q
    |||||||||||||  ||||||||||||||||||| |||| ||||||||||| |||||||||  |       || | | |||||||||||||||  |||||    
T  1383743 agaagttagggttttgaattgcaatttgattgttgaaagagtaggtaatccgatgaattaacgt-aataattggtcttcaggttgtagaataatcatagg 1383841  T
Q  258 taatgtttcctatcaaatttgggtag 283  Q
    | | ||||||||||||||||||||||    
T  1383842 ttaagtttcctatcaaatttgggtag 1383867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 14179728 - 14179788
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggttta 128  Q
    |||||||||||||||||||||||||||||||||||||| | |||| || ||||| ||||||    
T  14179728 taaggtaagggtgggactaaccttctttaatcatgagtatgtaatcctgaaaaaaggttta 14179788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 21315472 - 21315572
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||  || |||||||||||||||    
T  21315472 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttataga 21315571  T
Q  163 a 163  Q
    |    
T  21315572 a 21315572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 14183466 - 14183503
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagt 105  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14183466 taaggtaagggtgggactaaccttctttaatcatgagt 14183503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 28345140 - 28345184
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaat 215  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||    
T  28345140 ttgaatttcaatttgatttttaaaagtgtaggtaatccaatgaat 28345184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 36734620 - 36734693
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttgggtagttgtaattggggttttggggtgaaaa 309  Q
    |||||||||||||||   ||||| | |||||||||||||||||||||| || |||| |||||||  ||||||||    
T  36734620 caggttgtagaataatcttaggttaagtttcctatcaaatttgggtagatgaaatttgggtttttaggtgaaaa 36734693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 149497 - 149657
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaa---gggtttaa--ttttgtagctgttgataattttgatgtt 157  Q
    |||||||||||||||||| |||| | |||| |||| ||||||  ||||||||| |||||   ||||||||  | |||| | | ||| || ||||||||||    
T  149497 aatctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatgtt 149595  T
Q  158 atagaagttagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||| |||||||| ||| |  || ||||||||| |||| ||||||||||| |||||||||    
T  149596 atagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaa 149657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 23968624 - 23968684
Alignment:
Q  69 aaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    |||||||||||| |||||||||||||||||||| ||| | |||| || ||||| |||||||    
T  23968624 aaggtaagggtgagactaaccttctttaatcataagtatgtaatcctgaaaaaaggtttaa 23968684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 24918986 - 24918930
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  24918986 aatctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 24918930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 25046171 - 25046140
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  25046171 ctaaggtaagggtgggactaaccttctttaat 25046140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 22106309 - 22106255
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  22106309 tctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 22106255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 23610679 - 23610573
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||||||||| | |||| |||| ||| ||  ||||||| | ||||| |||||||  || ||| ||||| |  |||||||||||||||| |    
T  23610679 ctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttctagttgttgtttgttttgatgttatagaaat 23610580  T
Q  166 tagggtt 172  Q
    |||||||    
T  23610579 tagggtt 23610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 24718067 - 24718010
Alignment:
Q  72 gtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    ||||||||||||||||| |||||||||||| ||| | |||| || |||| ||||||||    
T  24718067 gtaagggtgggactaacattctttaatcataagtatgtaatcctgaaaaggggtttaa 24718010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 36734447 - 36734511
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    |||||||||||||||||||| ||| ||||| |||| ||| || ||||||||| ||| |||||||||    
T  36734447 aatctaaggtaagggtgggattaa-cttctctaataatgggtttataattctaaaatagggtttaa 36734511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 18388186 - 18388242
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||| |||||||||||  ||||| ||||| ||| ||||| ||||    
T  18388186 aatctaaggtaagggtgagactaaccttcaataatcctgagtatatgattctgaaaa 18388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 23706346 - 23706398
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  23706346 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 23706398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 23932302 - 23932250
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  23932302 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 23932250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 32214250 - 32214302
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  32214250 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 32214302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 33060557 - 33060208
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33060557 aagtcagagaagagaagagctttgtgagaagaaaggaaagcttgtagaattcagaattgaacaaatctaaggtaagggtgggactaaccttctttaatca 33060458  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    |||||||||||||||  |||||||||||||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  33060457 tgagtctataattctggaaaagggtttaattttgttgttgtttataattttgatgtaatagaagttaggtttgaattgcaatttgattgttgaaagtgta 33060358  T
Q  201 ggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattgg 293  Q
    || ||||||| ||||||||||       |||| | ||||| ||||||||||||||||||||||||| |||| |       ||||||||||||||||||||    
T  33060357 ggcaatccaaagaattaatat-aaaaattgatgttcaggtcgtagaataacaataggtaatgtttcatatcgaatttgggatttgggtagttgtaattgg 33060259  T
Q  294 ggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctc 344  Q
    |||||| || |||||| || ||| ||||| ||||||||| |||||| ||||    
T  33060258 ggtttttggatgaaaattgatttctgcccttagagctatttgtcatcgctc 33060208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 8 - 278
Target Start/End: Original strand, 42565772 - 42566042
Alignment:
Q  8 agaagagaagagctttgtgagaagaag-ggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtc 106  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| | |     
T  42565772 agaagagaagagttttgtgagaagaagtggaaagcttgtagaattcagaatttaaccaatctaaggtaagggtgagactaatcttctttaatcataaata 42565871  T
Q  107 tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaat 206  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||| || ||||| |||||||||||| |||||||| |||||    
T  42565872 tataattctgaaaaagggtttaatcttgtagttgttgataattttgttgttatagaagttaggtttaaattgaaatttgattgttgaaagtgtacgtaat 42565971  T
Q  207 ccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttg 278  Q
    |||||||||||| ||       |||| | |||||||||||||||||||||||||||||||||||||||||||    
T  42565972 ccaatgaattaacat-agaaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttg 42566042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 21661377 - 21661099
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||| ||||||||||||| |||||||| |  |||||||| |||  |||||||| | || | | | |||||||||||||||||||||||||||||||||    
T  21661377 aagtcagagaagagaagagcattgtgagagggcaagggaaagcttaaagaattcaaagttcatctagtctaaggtaagggtgggactaaccttctttaat 21661278  T
Q  99 catgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaa 195  Q
     ||||||  ||||||||| ||||||||  ||| ||||  | ||||||||||| |||||||  |||||||||||||  |||||||||||||||| || |||    
T  21661277 -atgagttatataattctgaaaaaggggctaactttgatgttgttgataattgtgatgtttaagaagttagggttttgaattgcaatttgattcttgaaa 21661179  T
Q  196 gtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatt 276  Q
    ||||| |||||||||||||||||| |       |||| |  |||||||||| ||||  |||||||||||||||||||||||    
T  21661178 gtgtaagtaatccaatgaattaatgt-gaaagttgatgtttaggttgtagagtaaccctaggtaatgtttcctatcaaatt 21661099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33556038 - 33556123
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggacta 86  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||||||| |||||| |||||||| ||||||||||||||    
T  33556038 aagtcaaagaagagaagagctttgtgagaagaagggaaagtttgtcgaattcagagtttaaccaatctaagataagggtgggacta 33556123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 280
Target Start/End: Complemental strand, 14274184 - 14274063
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaatagg 257  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||       |||| | |||||||||||||||  |||||    
T  14274184 agaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacat-atgaattgatgttcaggttgtagaataatcatagg 14274086  T
Q  258 taatgtttcctatcaaatttggg 280  Q
    | | |||||||| ||||||||||    
T  14274085 ttaagtttcctaacaaatttggg 14274063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 215
Target Start/End: Complemental strand, 37539504 - 37539352
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtct-ataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||| ||||||||||||||||| |||| ||||||||||| | |||||| | |||| | |||||   |||| | |||||| |||| ||||||||  ||    
T  37539504 aatctaaagtaagggtgggactaacattctataatcatgagtttcataattatgaaaaggagtttaccattgttgttgttga-aattatgatgttaatga 37539406  T
Q  163 agttagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaat 215  Q
    | ||||| || ||||| ||||||||||||| |||||||||||||||||||||||    
T  37539405 aattaggtttagaatttcaatttgattgttgaaagtgtaggtaatccaatgaat 37539352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 15119306 - 15119411
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    ||||||||||||| ||||||||||||||||||||| ||| | ||||  | |||||||||||||  |||||| |||| ||| ||||||||||| ||||| |    
T  15119306 ctaaggtaagggtaggactaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtagaa-t 15119404  T
Q  166 tagggtt 172  Q
    |||||||    
T  15119405 tagggtt 15119411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 43745709 - 43745607
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||||||||| | |||| |||| ||||||  ||||||| | |||||||||||||  |||||| ||||| || |||||||||||||||| |    
T  43745709 ctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 43745610  T
Q  166 tag 168  Q
    |||    
T  43745609 tag 43745607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 14318128 - 14318063
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    ||||||||||||||||||||| |||||||||||||||| ||| | |||| || |||||||||||||    
T  14318128 aatctaaggtaagggtgggacaaaccttctttaatcataagtatgtaatcctgaaaaagggtttaa 14318063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 15575645 - 15575754
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||| ||||||||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||  ||||| || |||||||||||||||    
T  15575645 aatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtacttgttgttagttttgatgttataga 15575744  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  15575745 aattagggtt 15575754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 13744744 - 13744796
Alignment:
Q  139 tgttgataattttgatgttatagaagttagggttgaattgcaatttgattgtt 191  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  13744744 tgttgataatttggatgttatagaagttaggtttgaactgcaatttgattgtt 13744796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 4690662 - 4690768
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    ||||||||| |||||||||||| |||| ||||  | |||  ||||||||| |||||||||||||  |||||| ||||  || |||||||||||||||| |    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattacttttgatgttatagaaat 4690761  T
Q  166 tagggtt 172  Q
    |||||||    
T  4690762 tagggtt 4690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 19195667 - 19195570
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatag 161  Q
    ||||||||||||||||||||||| | |||| |||| ||||| | |||||||| | ||||||||||||  |||||| ||||| || ||||||||||||||    
T  19195667 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattc-tgaaaagggtttaaccttgtagttgttgttagttttgatgttatag 19195570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 20252178 - 20252284
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    |||||||||||||||| |||||| | |||| |||| ||||||  ||||||||| |||||||||||||  |||||| ||||  || |||| ||||||||||    
T  20252178 aatctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttattagttttaatgttataga 20252277  T
Q  163 agttagg 169  Q
    | |||||    
T  20252278 aattagg 20252284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 47095508 - 47095394
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtcta-taattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||| | |||| |||| ||| ||  | ||||||| ||||| |||||||  |||||| ||||| ||  ||||||||||||||    
T  47095508 aatctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttgttaggtttgatgttataga 47095409  T
Q  163 agttagggttgaatt 177  Q
    | |||||||| ||||    
T  47095408 aattagggttaaatt 47095394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 14160856 - 14160960
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagtt 166  Q
    |||| ||||||||||||||||||||||||||||| ||| | |||| || |||| ||||||||  |||||| |||| |||  |||||||||| ||||| ||    
T  14160856 taagataagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtagttgttaataggttttgatgttgtagaa-tt 14160954  T
Q  167 agggtt 172  Q
    ||||||    
T  14160955 agggtt 14160960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 9743093 - 9743183
Alignment:
Q  82 gactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataa-ttttgatgttatagaagttagggtt 172  Q
    |||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||| |||||||||| ||||| ||||||||    
T  9743093 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaa-ttagggtt 9743183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 708425 - 708523
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatag 161  Q
    ||||||||||| ||||||||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| || || || ||||||||||||||    
T  708425 aatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgctgttagttttgatgttatag 708523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 708690 - 708752
Alignment:
Q  237 aggttgtagaataacaataggtaatgtttcctatcaaatttgggtagttgtaattggggtttt 299  Q
    ||||||||||||||  |||||| | |||||||||||||||||||||| || |||| |||||||    
T  708690 aggttgtagaataatcataggttaagtttcctatcaaatttgggtagatgaaatttgggtttt 708752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 36704567 - 36704601
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||||||||||||||||||||||||||||||||    
T  36704567 aatctaaggtaagggtgggactaaccttctttaat 36704601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 16250219 - 16250284
Alignment:
Q  65 atctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaa 129  Q
    |||||||||||||||||||||||| |||| |||| ||||| | ||||||| | |||||||||||||    
T  16250219 atctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaa 16250284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 8513752 - 8513828
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    |||||||||||||||||||||| |||| |||| ||| | | ||||||||| |||||||||||||  |||||| ||||    
T  8513752 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgtt 8513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 12754769 - 12754877
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctat 270  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||||||| |        || | | |||||||||||||||  |||||| | |||||||||    
T  12754769 ttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaa-agtaataattggtgttcaggttgtagaataatcataggttaagtttcctat 12754867  T
Q  271 caaatttggg 280  Q
    ||||||||||    
T  12754868 caaatttggg 12754877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 25943238 - 25943167
Alignment:
Q  148 ttttgatgttatagaagttagggttgaattgc-aatttgattgttaaaagtgtaggtaatccaatgaattaat 219  Q
    |||||||||||||||| |||||||| |||||| || ||||||||| |||| |||||||| ||| |||||||||    
T  25943238 ttttgatgttatagaaattagggtt-aattgcaaaattgattgttgaaagagtaggtaaaccattgaattaat 25943167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 47974983 - 47975042
Alignment:
Q  161 gaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    ||||||||||||  ||||||||||||||||||| ||||  |||||||||| |||||||||    
T  47974983 gaagttagggttttgaattgcaatttgattgttgaaagattaggtaatccgatgaattaa 47975042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 8488093 - 8488156
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaa 129  Q
    |||||||||||||||||||||| |||| |||| ||| | | ||||||||| |||||||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaa 8488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 8930847 - 8930918
Alignment:
Q  148 ttttgatgttatagaagttagggttgaattgc-aatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||||| |||||||| | |||| || ||||||||| |||| |||||||| ||| ||||||||    
T  8930847 ttttgatgttatagaaattagggttaatttgcaaaattgattgttgaaagagtaggtaaaccattgaattaa 8930918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Original strand, 10658850 - 10658881
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  10658850 ctaaggtaagggtgggactaaccttctttaat 10658881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 25942356 - 25942293
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttgggtagttgtaattggggtttt 299  Q
    |||||||||||||||   ||||| | |||||||||||||||||||||| || |||| |||||||    
T  25942356 caggttgtagaataatcttaggttaagtttcctatcaaatttgggtagatgaaatttgggtttt 25942293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 38299804 - 38299737
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaat 130  Q
    ||||||||||||||||||||||| | |||| |||| ||| | | ||||||||| ||||||||||||||    
T  38299804 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaat 38299737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 5294430 - 5294484
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  5294430 tctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 5294484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 5295603 - 5295657
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  5295603 tctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 5295657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 5296776 - 5296830
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  5296776 tctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 5296830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 4325981 - 4325937
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  4325981 caggttgtagaataatcataggttaagtttcctatcaaatttggg 4325937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 8941316 - 8941264
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  8941316 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 8941264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 10500731 - 10500787
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| | |||  ||||| ||||||||| ||||| ||||    
T  10500731 aatctaaggtaagggtgggactatcattcaataatcttgagtctatgattctgaaaa 10500787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 11392516 - 11392568
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  11392516 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 11392568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 14105594 - 14105638
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  14105594 caggttgtagaataatcataggttaagtttcctatcaaatttggg 14105638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 14156388 - 14156444
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| | |||  ||||| ||||||||| ||||| ||||    
T  14156388 aatctaaggtaagggtgggactatcattcaataatcttgagtctatgattctgaaaa 14156444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 14269084 - 14269136
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  14269084 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 14269136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 14415611 - 14415655
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  14415611 caggttgtagaataatcataggttaagtttcctatcaaatttggg 14415655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 92
Target Start/End: Original strand, 15095633 - 15095661
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttc 92  Q
    |||||||||||||||||||||||||||||    
T  15095633 aatctaaggtaagggtgggactaaccttc 15095661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 19195140 - 19195096
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaat 215  Q
    ||||||| |||||||||| || |||||||| ||||||||||||||    
T  19195140 ttgaatttcaatttgatttttgaaagtgtatgtaatccaatgaat 19195096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 29052350 - 29052442
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttgggtagttgtaattggg-gttttggggtgaaaactggtttatgcccgtaga 327  Q
    |||| ||||||||||  ||||||   |||||||||||||||||||| | || |||||||  |||||| |||||||||||| | | ||||||||    
T  29052350 caggctgtagaataaacataggttgagtttcctatcaaatttgggttgatgaaattgggacttttggagtgaaaactggtctgttcccgtaga 29052442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 191; Significance: 1e-103; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 26 - 357
Target Start/End: Original strand, 21187992 - 21188329
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    ||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| | | ||||| |    
T  21187992 gagaagaagagaaagtttgtagaattcagaatttaaccaatctaaggtaagggtgggactaaccttttttaatcatgagtatataattttgagaaaggat 21188091  T
Q  126 ttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnn 225  Q
    |||||||||||| |||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||        
T  21188092 ttaattttgtagttgttgatagttttgatgttatagaagttaggtttaaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaatat-aaa 21188190  T
Q  226 nnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattggggttttggggtgaaaactggtttat 318  Q
       |||| | ||||||||||||||| |||| |||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||||||    
T  21188191 aattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatttgggtagttgtaattggggtttttgggtgaaaactggtttat 21188290  T
Q  319 gcccgtagagctatctgtcattgctcaccacggcgagtg 357  Q
    ||||||| ||||||||||||| |||  ||||||||||||    
T  21188291 gcccgtaaagctatctgtcatcgcttgccacggcgagtg 21188329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 20707990 - 20708268
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||| ||||||||||||  |||||||| |  |||||||| |||  |||||||| | || | | ||||||||||||||||||||||||||||||||||     
T  20707990 aagtcagagaagagaagagtattgtgagagggcaagggaaagcttaaagaattcaaagttcatccaatctaaggtaagggtgggactaaccttctttaa- 20708088  T
Q  99 catgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg--ttgaattgcaatttgattgttaaaa 195  Q
    |||||| ||||||||||| |||||||| |||| ||||  | ||||||||||| |||||||| |||| ||||||  |||||||||||||||||| || |||    
T  20708089 catgagttctataattctgaaaaaggggttaactttgatgttgttgataattgtgatgttaaagaaattagggttttgaattgcaatttgattcttgaaa 20708188  T
Q  196 gtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatt 276  Q
    ||||| |||||||||| ||||||| |       |||| |  |||||||||| ||||  |||||||||||||||||||||||    
T  20708189 gtgtaagtaatccaataaattaatgt-gaaagttgatgtttaggttgtagagtaaccctaggtaatgtttcctatcaaatt 20708268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 65 - 276
Target Start/End: Complemental strand, 39061375 - 39061163
Alignment:
Q  65 atctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaag 164  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||| ||||| |||||||  |||||| |||||||| ||||||||||||||||     
T  39061375 atctaaggtaagagtgggactaaccttctgtaatcatgagtatataattctgaaaaaaggtttaaccttgtagttgttgatagttttgatgttatagaat 39061276  T
Q  165 ttaggg--ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatg 262  Q
    ||||||  |||||||| ||||||||| || |||||||| ||||||| |||||||||| |       |||| |  |||||||||| ||||  |||||||||    
T  39061275 ttagggttttgaattgtaatttgattcttgaaagtgtaagtaatccgatgaattaatgt-gaaagttgatgtttaggttgtagagtaaccctaggtaatg 39061177  T
Q  263 tttcctatcaaatt 276  Q
    ||||||||||||||    
T  39061176 tttcctatcaaatt 39061163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 44822221 - 44822342
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaatagg 257  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||       |||| | ||||||||||||||||||||||    
T  44822221 agaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacat-atgaattgatgttcaggttgtagaataacaatagg 44822319  T
Q  258 taatgtttcctatcaaatttggg 280  Q
    | || |||| |||||||||||||    
T  44822320 tgatatttcttatcaaatttggg 44822342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 22350641 - 22350567
Alignment:
Q  149 tttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatat 221  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  22350641 tttgatgttatagaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaattcaatgaattaatat 22350567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 28476730 - 28476839
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    |||||||||||||||||||||||   |||| |||| ||||||  ||||||||| |||||||||||||  |||||| ||||| || |||||||||||||||    
T  28476730 aatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 28476829  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  28476830 aattagggtt 28476839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 14792562 - 14792637
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| ||||    
T  14792562 ctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgtt 14792637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 38887086 - 38887191
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    ||||||||||||||  ||||||||||||||||||| ||| | |||| || |||||||||||||| |||||| |||| |||  |||||||||| ||||| |    
T  38887086 ctaaggtaagggtgaaactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtagaa-t 38887184  T
Q  166 tagggtt 172  Q
    |||||||    
T  38887185 tagggtt 38887191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 41225454 - 41225515
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    |||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||    
T  41225454 taaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaa 41225515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 41226707 - 41226768
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    |||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||    
T  41226707 taaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaa 41226768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 218
Target Start/End: Complemental strand, 34392833 - 34392667
Alignment:
Q  55 aatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaa--ttttgtagctgttgataatttt 151  Q
    |||| ||| ||||||||||||||||| ||||| | |||| |||| ||| ||  ||| ||||| |||| ||||||||  | |||| | | ||| || ||||    
T  34392833 aattcaaccaatctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttt 34392735  T
Q  152 gatgttatagaagttagggttgaattgc-aatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||| |||||||| |||||| || ||||||||| |||| |||||||||||| ||||||||    
T  34392734 gatgttatagaaattagggttaaattgcaaaattgattgttgaaagagtaggtaatccattgaattaa 34392667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 217
Target Start/End: Complemental strand, 18121656 - 18121505
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    ||||||||||||||||| ||||||||||||||||| ||| | |||| || ||||||| |||||  |||||| |||| |||  |||||||||| ||||| |    
T  18121656 ctaaggtaagggtgggattaaccttctttaatcataagtatgtaatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgttgtagaatt 18121557  T
Q  166 tagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaatta 217  Q
     ||| |||||    || ||||| || ||||| |||| |||||| ||||||||    
T  18121556 aaggtttgaaactaaaattgatcgtaaaaagagtagataatccgatgaatta 18121505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 24007224 - 24007330
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa-ttttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||||||||| | |||| | || |||| | ||||||||| ||||| |||||||  ||||||| ||||| || |||||||||||||||  |    
T  24007224 ctaaggtaagggtgggactagctttctctgataatgattgtataattctgaaaaaaggtttaacctttgtagttgttgttagttttgatgttatagagat 24007323  T
Q  166 tagggtt 172  Q
    |||||||    
T  24007324 tagggtt 24007330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 12710879 - 12710814
Alignment:
Q  107 tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggtt 172  Q
    ||||||||| |||||||||||||| |||||| ||||| || |||||||||||||||| ||| ||||    
T  12710879 tataattctgaaaaagggtttaatcttgtagttgttgttagttttgatgttatagaaattaaggtt 12710814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 8275988 - 8276079
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgtt 157  Q
    |||||||||||||| ||||| | || | |||| ||||||  ||||||||| |||||||||||||  |||||| |||||||| ||||||||||    
T  8275988 ctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaaccttgtagttgttgatatttttgatgtt 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 8306662 - 8306505
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaa--ttttgtagctgttgataattttgatgttata 160  Q
    ||||||||||||| ||||||||| | |||| |||| ||| ||  ||||||||| |||| ||||||||  | |||| | | ||| || |||||||||||||    
T  8306662 aatctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatgttata 8306564  T
Q  161 gaagttagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    ||| |||||||| ||| |  || ||||||||| |||| ||||||||||| |||||||||    
T  8306563 gaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaa 8306505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 38056668 - 38056762
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgtt 157  Q
    ||||||||||||||||||||||| | |||| || | ||| ||  ||||||||| |||||||||||||  |||||| ||||| || ||||||||||    
T  38056668 aatctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtt 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 7703201 - 7703129
Alignment:
Q  41 cttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataatt 113  Q
    |||||||||||||  | | ||| ||||||||||||||||||||||| | |||| |||| |||||| |||||||    
T  7703201 cttgtagaattcaccaatcaaccaatctaaggtaagggtgggactagctttctctaataatgagtttataatt 7703129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 22050346 - 22050402
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  22050346 aatctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 22050402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 7052117 - 7052164
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    ||||||||||||||||||||| |||| ||||||||||  |||||||||    
T  7052117 ttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaa 7052164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 21243761 - 21243832
Alignment:
Q  71 ggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    |||||||||| |||||||||||||||||||| | | | |||| || |||||||||||||  |||||| ||||    
T  21243761 ggtaagggtgagactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgtt 21243832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 22823315 - 22823419
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctat 270  Q
    |||||||||||||||||| || |||||||| ||||| | |||||||||| |       |||| |  |||||||||| ||||  |||||||||||||||||    
T  22823315 ttgaattgcaatttgattcttgaaagtgtaagtaattcgatgaattaatgt-gaaagttgatgtttaggttgtagagtaaccctaggtaatgtttcctat 22823413  T
Q  271 caaatt 276  Q
    ||||||    
T  22823414 caaatt 22823419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 24727420 - 24727389
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  24727420 ctaaggtaagggtgggactaaccttctttaat 24727389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 44892502 - 44892427
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    ||||| ||||||||||||||||||||||||||||| ||| | ||||  | ||||||| |||||  |||||| ||||    
T  44892502 ctaagttaagggtgggactaaccttctttaatcataagtatgtaatcttgaaaaaggatttaaccttgtagttgtt 44892427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 45574186 - 45574233
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttgggtag 283  Q
    |||||||||||||||  |||||| | ||||||||||||||||||||||    
T  45574186 caggttgtagaataatcataggttaagtttcctatcaaatttgggtag 45574233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 24719550 - 24719620
Alignment:
Q  107 tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaatt 177  Q
    ||||||||| |||||||||||||  |||||| ||||  || |||||||||||||||| ||| |||| ||||    
T  24719550 tataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattaaggttaaatt 24719620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 34392585 - 34392519
Alignment:
Q  293 gggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgagtgat 359  Q
    ||||||| || ||||||| ||||| | |||||||| || |||||||| |||| ||||||||||||||    
T  34392585 gggtttttggctgaaaacaggtttcttcccgtagaactgtctgtcatcgctcgccacggcgagtgat 34392519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 11808187 - 11808224
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcat 101  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  11808187 aatccaaggtaagggtgagactaaccttctttaatcat 11808224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 16401963 - 16401903
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    |||||||||||||||||||| ||||| |||| ||| || ||||||||| ||| |||||||||    
T  16401963 taaggtaagggtgggactaa-cttctctaataatgggtttataattctgaaatagggtttaa 16401903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 7703052 - 7703020
Alignment:
Q  180 aatttgattgttaaaagtgtaggtaatccaatg 212  Q
    |||||||||||| ||||||||||||||||||||    
T  7703052 aatttgattgttgaaagtgtaggtaatccaatg 7703020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 22145666 - 22145742
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttg 143  Q
    ||||||||||||||||||||| |||| |||| ||| | | | ||||||| |||||||||||||  |||||| |||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaaccttgtagttgttg 22145742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 92
Target Start/End: Complemental strand, 22350772 - 22350744
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttc 92  Q
    |||||||||||||||||||||||||||||    
T  22350772 aatctaaggtaagggtgggactaaccttc 22350744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 24723628 - 24723672
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  24723628 caggttgtagaataatcataggttaagtttcctatcaaatttggg 24723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 29299087 - 29299031
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||||| |||  ||||| ||| ||||| ||||| ||||    
T  29299087 aatctaaggtaagggtgggactaacattcaataatcttgaatctatgattctgaaaa 29299031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 43543545 - 43543493
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  43543545 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 43543493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 46560130 - 46560078
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  46560130 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 46560078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 50544928 - 50544848
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttg 143  Q
    ||||||||||||||||| ||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| |||||    
T  50544928 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 50544848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 726 - 446
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||| || |||||||  |||||||||||||||||||||||||||||||||||||    
T  726 aagtcagagaagagaagagctttgtgagaagaagggaaagcttgtagaatacataatttaatcaatctaaggtaagggtgggactaaccttctttaatca 627  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  626 tgagtctataattcttaaaaatggtttaattttgttgttgttgataattttgatgttatagaagttaggtttgaattgcaatttgattgttgaaagtgta 527  T
Q  201 ggtaatccaatgaattaatat-nnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||| ||||||||||||||        |||| | | |||||||||||||||||||||||||||| ||||||||||||||    
T  526 ggtaattcaatgaattaatataatacaattgatgttcgggttgtagaataacaataggtaatgttttctatcaaatttggg 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 14477750 - 14477416
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  14477750 aagtcagagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaaccaatctaaggtaagggtggcactaaccttctttaatca 14477651  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    ||||| ||||||||| ||||||||||| || ||||||  ||||||| ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  14477650 tgagtatataattctgaaaaagggtttgatcttgtagtcgttgatagttttgatgttatagaagttagggttaaattgaaatttgattgttgaaagtgta 14477551  T
Q  201 ggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatca-------aatttgggtagttgtaattgg 293  Q
    |||||||||||||||||| ||       |||| | ||| |||||||||||||||| |||||||||||| |||       |||||||||||||| ||||||    
T  14477550 ggtaatccaatgaattaacat-agaaattgatgttcagattgtagaataacaataagtaatgtttcctgtcaaatttggaatttgggtagttgaaattgg 14477452  T
Q  294 ggttttggggtg-aaaactggtttatgcccgtagag 328  Q
    |||||  ||||| ||||||||||| |||||||||||    
T  14477451 ggtttctgggtgaaaaactggtttctgcccgtagag 14477416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 18463116 - 18462863
Alignment:
Q  27 agaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtt 126  Q
    ||||||||||||| |||||||| || |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  18463116 agaagaagggaaagcttgtagagttgagaatttaaccaatctaaggtaaaggtgggactaaccttctttaatcatgagtatataattctgaaaaagggtt 18463017  T
Q  127 taattttgtagctgttgataattttgatgttatagaagttagg-gttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnn 225  Q
    ||||||||||| |||| ||| ||||||||||||| ||||||||  || |||| ||||||||||||| |||||||||||||||||||||||||| ||        
T  18463016 taattttgtagttgttaatagttttgatgttataaaagttaggttttaaattacaatttgattgttgaaagtgtaggtaatccaatgaattaacat-gaa 18462918  T
Q  226 nnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
       |||| | ||| |||||||| |||||||||||||||||||| |||||||||||    
T  18462917 aattgatgttcagattgtagaacaacaataggtaatgtttcctgtcaaatttggg 18462863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 264
Target Start/End: Complemental strand, 13165213 - 13164989
Alignment:
Q  38 aaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtag 137  Q
    ||||||||||| | || |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||  ||| | |||||||| |||||||| |||    
T  13165213 aaacttgtagagtcca-aattcaaccaatctaaggtaagggtgggactaaccttctttaatcatgagtataggattgtgaaaaaggggttaattttatag 13165115  T
Q  138 ctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatcca 237  Q
     |||| ||| |||||||||||||||||||||  || ||||| |||||||||||| |||||||||| ||||||||||||||| ||       |||| ||||    
T  13165114 ttgttaatagttttgatgttatagaagttagattttaattgaaatttgattgttgaaagtgtaggaaatccaatgaattaacat-gaaaattgatgtcca 13165016  T
Q  238 ggttgtagaataacaataggtaatgtt 264  Q
    |||||||||||||||||||||||||||    
T  13165015 ggttgtagaataacaataggtaatgtt 13164989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 14353729 - 14353951
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatct-aaggtaagggtgggactaaccttctttaa 97  Q
    |||||| ||||||||||||| |||||||| |  ||| |||| |||  |||||||| | || | | ||||| |||||||||||||||| ||||||||||||    
T  14353729 aagtcagagaagagaagagcattgtgagagggcaagagaaagcttaaagaattcaaagttcatccaatcttaaggtaagggtgggaccaaccttctttaa 14353828  T
Q  98 tcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggtt--gaattgcaatttgattgttaaa 194  Q
    | ||||||  ||||||||| ||||||||  ||| ||||    ||||||||||| |||||||| |||||||||||||  |||||||||||||||| || ||    
T  14353829 t-atgagttatataattct-aaaaaggggctaactttgatattgttgataattgtgatgttaaagaagttagggttttgaattgcaatttgattcttgaa 14353926  T
Q  195 agtgtaggtaatccaatgaattaat 219  Q
    |||||| ||||||| ||||||||||    
T  14353927 agtgtaagtaatccgatgaattaat 14353951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 26921508 - 26921653
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa-ttttgtagctgttgataattttgatgttatagaagt 165  Q
    ||||||||||||| |||||||||||| |||||||| ||| | ||||||| |||||||||||||  ||||||| ||||| || ||||||||| |||||  |    
T  26921508 ctaaggtaagggtaggactaaccttcattaatcataagtatgtaattctgaaaaagggtttaacatttgtagttgttgttagttttgatgtcatagagat 26921607  T
Q  166 tagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaatt 216  Q
    |||||||  |||| ||||| ||||||||    |||||||||||||||||||    
T  26921608 tagggttagattg-aatttaattgttaa----gtaggtaatccaatgaatt 26921653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 25513907 - 25513798
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    |||||||||||| |||||||||| | |||| |||| ||||||  ||||||||| |||||||||||||  |||||| ||||| || |||||||||||||||    
T  25513907 aatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttgttagttttgatgttataga 25513808  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  25513807 aattagggtt 25513798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 9639066 - 9638972
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgtt 157  Q
    ||||||||||||||||||||||| | |||| |||| ||||||  | ||||||| |||||||||||||  |||||| |||||||||||||||||||    
T  9639066 aatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgttgataattttgatgtt 9638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 12623372 - 12623264
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttataga 162  Q
    ||||||||||||||||||||||||||||||||||||||  || | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||    
T  12623372 aatctaaggtaagggtgggactaaccttctttaatcataggtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaga 12623273  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  12623272 a-ttagggtt 12623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 14631191 - 14631082
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||| ||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||| || |||||||||||||||    
T  14631191 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 14631092  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  14631091 aattagggtt 14631082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 19565914 - 19566022
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttataga 162  Q
    |||||||||||||||||| ||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||    
T  19565914 aatctaaggtaagggtggtactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaga 19566013  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  19566014 a-ttagggtt 19566022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 16296994 - 16296897
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttata 160  Q
    ||||||||||||||||||||||| | |||| |||| ||||||  ||||||||| |||||||||||||  | |||| ||||| || |||||||||||||    
T  16296994 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttgttagttttgatgttata 16296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 40230362 - 40230254
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttataga 162  Q
    ||||||||||||||||||||||||| |||||||||||| ||| | ||||  | |||||||||||||  |||||| |||| |||  |||||||||| ||||    
T  40230362 aatctaaggtaagggtgggactaactttctttaatcataagtatgtaatcttgaaaaagggtttaacattgtagttgttaataggttttgatgttgtaga 40230263  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  40230262 a-ttagggtt 40230254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 9622459 - 9622388
Alignment:
Q  148 ttttgatgttatagaagttagggttgaattgc-aatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||||| |||||||| |||||| || ||||||||| |||| |||||||||||| ||||||||    
T  9622459 ttttgatgttatagaaattagggttaaattgcaaaattgattgttgaaagagtaggtaatccattgaattaa 9622388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 45314097 - 45314188
Alignment:
Q  82 gactaaccttctttaatcatgagtctataattcttaaaaagggtttaa-ttttgtagctgttgataattttgatgttatagaagttagggtt 172  Q
    ||||||||||| |||||||| ||| | ||||||| |||||||||||||  ||||||| ||||| || |||||||||||||||  ||||||||    
T  45314097 gactaaccttcattaatcataagtatgtaattctgaaaaagggtttaacatttgtagttgttgttagttttgatgttatagagattagggtt 45314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 2424386 - 2424492
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||| ||||||| |||| ||||  | |||  ||||||| | |||||||||||||| |||||| ||||  || |||||||||||||||| |    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaatcttgtagttgttattagttttgatgttatagaaat 2424485  T
Q  166 tagggtt 172  Q
    |||||||    
T  2424486 tagggtt 2424492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 26446260 - 26446154
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||| |||||||| |||||| | |||| |||| ||| ||  ||||||||| ||||| |||||||| |||||| ||||| || |||||||||||||||| |    
T  26446260 ctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaatcttgtagttgttgttagttttgatgttatagaaat 26446161  T
Q  166 tagggtt 172  Q
    |||||||    
T  26446160 tagggtt 26446154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 33243290 - 33243398
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttataga 162  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| | ||||  | ||| |||||||||| |||||| |||| |||  |||||||||| ||||    
T  33243290 aatctaaggtaagggtgagactaacattctttaatcataagtatgtaatcttgaaatagggtttaatcttgtagttgttaataggttttgatgttgtaga 33243389  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  33243390 a-ttagggtt 33243398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 44023599 - 44023664
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    ||||||||||||||||| |||||||||||||||||||| ||| | ||||  | |||||||||||||    
T  44023599 aatctaaggtaagggtgcgactaaccttctttaatcataagtatgtaatcttgaaaaagggtttaa 44023664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 46741252 - 46741177
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    |||||||||| |||||||||||||||||||||||| | | | |||| || |||||||||||||  |||||| ||||    
T  46741252 ctaaggtaagtgtgggactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgtt 46741177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 13043936 - 13043980
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  13043936 caggttgtagaataacaataggtgatgttccttatcaaatttggg 13043980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 19434763 - 19434871
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctat 270  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||||||| |        || | | |||||||||||||||  |||||| | |||||||||    
T  19434763 ttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaa-agaaataattggtgttcaggttgtagaataatcataggttaagtttcctat 19434861  T
Q  271 caaatttggg 280  Q
    ||||||||||    
T  19434862 caaatttggg 19434871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 15613143 - 15613112
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  15613143 ctaaggtaagggtgggactaaccttctttaat 15613112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 16296843 - 16296772
Alignment:
Q  148 ttttgatgttatagaagttagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||||| |||||||| ||| |  || ||||||||| |||| ||||||||||| |||||||||    
T  16296843 ttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaa 16296772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 51993614 - 51993583
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  51993614 ctaaggtaagggtgggactaaccttctttaat 51993583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 363217 - 363163
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  363217 tctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 363163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 19858455 - 19858402
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaa 121  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| |||||    
T  19858455 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaaa 19858402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 26014340 - 26014299
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagt 105  Q
    |||||||||||||||||||||||||||||  ||||| |||||    
T  26014340 aatctaaggtaagggtgggactaaccttcaataatcttgagt 26014299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 1836734 - 1836786
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  1836734 taaggtaagggtgggactaacattcaataatcttgagtctatcattctgaaaa 1836786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 3515853 - 3515797
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||| ||||||| |||  ||||| ||||||||| ||||| ||||    
T  3515853 aatctaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaa 3515797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 15489469 - 15489521
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    |||||||||||||||| |||| |||  ||||| ||||||||||||||| ||||    
T  15489469 taaggtaagggtgggaataacattcaataatcttgagtctataattctgaaaa 15489521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 19617395 - 19617447
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  19617395 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 19617447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 28386129 - 28386085
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  28386129 caggttgtagaataatcataggttaagtttcctatcaaatttggg 28386085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 45314241 - 45314289
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaat 219  Q
    |||||||||||||||||| || |||||||| ||||| | ||||||||||    
T  45314241 ttgaattgcaatttgattcttgaaagtgtaagtaattcgatgaattaat 45314289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 175; Significance: 4e-94; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 26 - 358
Target Start/End: Original strand, 3160585 - 3160916
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||| ||||    
T  3160585 gagaagaagggaaagcttgtagaattctgaatttaaccaatctaaggtaagggtgagactaaccttctttaatcatgagtatataattctaaaaatgggt 3160684  T
Q  126 ttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnn 225  Q
    |||| ||||||| |||||||| ||||||| |||||||| ||||| || |||||||||||||||||| |||| ||||||||| ||||||||||||||        
T  3160685 ttaactttgtagttgttgatagttttgatattatagaaattaggtttaaattgcaatttgattgttgaaagagtaggtaattcaatgaattaatat-aaa 3160783  T
Q  226 nnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttgggtagttgtaattggggttttggggtgaaaactggtttatgcccgta 325  Q
       |||| |  ||||||||||||||||||||  ||||||||||| |||||||||| ||||  ||||| | |||| ||||||||||||||||  |||||||    
T  3160784 aattgatgtttaggttgtagaataacaatagacaatgtttcctaccaaatttgggaagttaaaattgagatttttgggtgaaaactggtttcggcccgta 3160883  T
Q  326 gagctatctgtcattgctcaccacggcgagtga 358  Q
    ||||||| |||||| ||||||||||||||||||    
T  3160884 gagctatttgtcatcgctcaccacggcgagtga 3160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 8 - 280
Target Start/End: Complemental strand, 48631443 - 48631172
Alignment:
Q  8 agaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtct 107  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | | |    
T  48631443 agaagagaatagctttgtgagaagaaggaaaaacttgtagaattcagagtttaaccaatctaaggtaagggtgggactaaccttctttaatcataaatat 48631344  T
Q  108 ataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatc 207  Q
    ||| |||| |||||||||||||  |||||| |||| ||| |||||||||||||||||| |||||| |||||| | ||||||||| ||||||||||||||     
T  48631343 atagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaagtcagggttaaattgctaattgattgttgaaagtgtaggtaatt 48631244  T
Q  208 caatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    ||||||||||| ||       |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  48631243 caatgaattaacat-aagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 48631172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12150881 - 12151098
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||||||||| |||||||||||||||||||||||    
T  12150881 aagtcagagaagagaagagctttgtaagaagaagggaaagcttgtagaattcagagtgtaaccaatctaaggtaagagtgggactaaccttctttaatca 12150980  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    | ||| |||   ||| |||| || ||||   |||||  |||| ||| ||||||||||||||||||||||||| | || ||| ||||||||| ||||||||    
T  12150981 ttagtatatgtatctgaaaagggatttaggcttgtatttgttaatagttttgatgttatagaagttagggttaattttcaaattgattgttgaaagtgta 12151080  T
Q  201 ggtaatccaatgaattaa 218  Q
    ||||| ||||||||||||    
T  12151081 ggtaacccaatgaattaa 12151098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 6003306 - 6003025
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||| ||||||||||||| |||||||| |  |||||||| |||  |||||||| | || | | |||||||||||||||||||||||||||||||||||    
T  6003306 aagtcagagaagagaagagcattgtgagagggcaagggaaagcttaaagaattcaaagttcatccaatctaaggtaagggtgggactaaccttctttaat 6003207  T
Q  99 catgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg--ttgaattgcaatttgattgttaaaa 195  Q
     ||||| ||||||||||| ||||||||  ||| ||||  | ||||||||||| |||||||| |||| ||||||  ||||||| |||||||||| || |||    
T  6003206 -atgagttctataattctgaaaaaggggctaactttgatgttgttgataattgtgatgttaaagaaattagggttttgaattacaatttgattcttgaaa 6003108  T
Q  196 gtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttgg 279  Q
    ||||| |||||||||||||||||| |       || | |  |||||||||| ||||  ||||||||||||||||||||||||||    
T  6003107 gtgtaagtaatccaatgaattaat-ttgaaagttgttgtttaggttgtagagtaaccctaggtaatgtttcctatcaaatttgg 6003025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 280
Target Start/End: Original strand, 12154972 - 12155239
Alignment:
Q  10 aagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctat 109  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||  |||||| || |||| |     |||||||||||||||||||||||| ||| |||    
T  12154972 aagagaagagctttgtgaaaagaagggaaatcttgtagaattcagggtttaaccaagctaatg-----gtgggactaaccttctttaatcataagtatat 12155066  T
Q  110 aattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaat---ttgattgttaaaagtgtaggtaat 206  Q
      |||| |||| || ||||   |||||| |||| ||| ||||||||||||||||||||||||| | |||||||   ||||||||| |||||||||||||     
T  12155067 ggttctgaaaagggatttaggattgtagttgttaatagttttgatgttatagaagttagggttaatttgcaattaattgattgttgaaagtgtaggtaac 12155166  T
Q  207 ccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||| ||       |||| |  ||||||||||||||| ||||||||||||  || |||||||||||    
T  12155167 ccaatgaattaacat-gaaaattgatgttgaggttgtagaataactataggtaatgttctctgtcaaatttggg 12155239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 50350812 - 50350963
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaa--gggtttaa-ttttgtagctgttgataattttgatgttata 160  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||  ||||||| | ||| || |||||||||||||    
T  50350812 aatctaaggtaagggtgggactaaccttctttaatcatgagtatataattctgaaaaaaggggtttaacctttgtagtttttgttagttttgatgttata 50350911  T
Q  161 gaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatga 213  Q
    ||  ||||||||  |||| ||||| ||||||||||| ||||||||||||||||    
T  50350912 gagattagggttagattg-aatttaattgttaaaagcgtaggtaatccaatga 50350963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 64 - 217
Target Start/End: Original strand, 21845648 - 21845801
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaa 163  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  21845648 aatctaaggtaagggtgggactaaccttctttaatcataagtatatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaa 21845747  T
Q  164 gttagg-gttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaatta 217  Q
     |||||  |||| ||| || |||||||||||||  |||| |||| |||| |||||    
T  21845748 attaggttttgatttggaa-ttgattgttaaaaaagtagataattcaataaatta 21845801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 50755355 - 50755422
Alignment:
Q  121 agggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgtt 191  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50755355 agggtttaattttgt---tgttgataattttgatgttatagaagttaggtttgaattgcaatttgattgtt 50755422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 17208580 - 17208471
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||| | |||| |||| ||||||  ||||||||| ||||||| |||||  |||||| ||||| || |||||||||||||||    
T  17208580 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttataga 17208481  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  17208480 aattagggtt 17208471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 14520502 - 14520388
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||| | ||||||||| ||| ||  ||||||||| ||||| |||||||  |||||| ||||| || ||||||||||||| |    
T  14520502 aatctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttgttagttttgatgttataaa 14520403  T
Q  163 agttagggttgaatt 177  Q
    | |||||||| ||||    
T  14520402 aattagggttaaatt 14520388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 13522440 - 13522560
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaatagg 257  Q
    |||||||||||||  ||||| ||| ||||| |||||| | ||||||||||||||||||||| ||       |||| | ||||||||||||||||||||||    
T  13522440 agaagttagggttttgaatttcaaattgatcgttaaa-gagtaggtaatccaatgaattaacataagaat-tgatgttcaggttgtagaataacaatagg 13522537  T
Q  258 taatgtttcctatcaaatttggg 280  Q
    | |||||||||||||||||||||    
T  13522538 tgatgtttcctatcaaatttggg 13522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 53646055 - 53646163
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttataga 162  Q
    |||||||||||||||||||||||||||||||||||||| | | | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||    
T  53646055 aatctaaggtaagggtgggactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaga 53646154  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  53646155 a-ttagggtt 53646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 13520367 - 13520318
Alignment:
Q  139 tgttgataattttgatgttatagaagttagggttgaattgcaatttgatt 188  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13520367 tgttgataattttgatgttatagaagtttggtttgaattgcaatttgatt 13520318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 29907695 - 29907549
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatg-ttatag 161  Q
    ||||||||||||||||||||||| | |||||||||  || | | ||||||||| |||||||||||||  |||||| ||||| ||  ||||||| ||| ||    
T  29907695 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagag 29907596  T
Q  162 aagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaat 206  Q
    || ||||||||   ||||  ||||  |||||| ||||||||||||||    
T  29907595 aaattagggttagaaattaaaattgaattgttgaaagtgtaggtaat 29907549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 29948861 - 29948715
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatg-ttatag 161  Q
    ||||||||||||||||||||||| | |||||||||  || | | ||||||||| |||||||||||||  |||||| ||||| ||  ||||||| ||| ||    
T  29948861 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagag 29948762  T
Q  162 aagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaat 206  Q
    || ||||||||   ||||  ||||  |||||| ||||||||||||||    
T  29948761 aaattagggttagaaattaaaattgaattgttgaaagtgtaggtaat 29948715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 29998015 - 29997869
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatg-ttatag 161  Q
    ||||||||||||||||||||||| | |||||||||  || | | ||||||||| |||||||||||||  |||||| ||||| ||  ||||||| ||| ||    
T  29998015 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagag 29997916  T
Q  162 aagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaat 206  Q
    || ||||||||   ||||  ||||  |||||| ||||||||||||||    
T  29997915 aaattagggttagaaattaaaattgaattgttgaaagtgtaggtaat 29997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 54330314 - 54330411
Alignment:
Q  75 agggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagttagggtt 172  Q
    |||||||||||||| |||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||| ||||||||    
T  54330314 agggtgggactaactttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa-ttagggtt 54330411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 6805018 - 6805078
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||  ||||||||||||||||||| |||| ||||||||||  |||||||||    
T  6805018 agaagttagggttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaa 6805078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 3527236 - 3527306
Alignment:
Q  148 ttttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||||| |||||||| | ||| |  ||||||||| |||| |||||||| ||| ||||||||    
T  3527236 ttttgatgttatagaaattagggttaatttgtagattgattgttgaaagagtaggtaagccattgaattaa 3527306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 11563781 - 11563747
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||||||||||||||||||||||||||| ||||    
T  11563781 aatctaaggtaagggtgggactaaccttctctaat 11563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 14641544 - 14641638
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgtt 157  Q
    |||||||||||||||||||| || | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||| || | ||||||||    
T  14641544 aatctaaggtaagggtgggattagctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagtattgatgtt 14641638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 12119184 - 12119237
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    |||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  12119184 ctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 12119237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 24177860 - 24177920
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||  ||||||||||||||||||| |||| ||||| || ||| ||||||||    
T  24177860 agaagttagggttttgaattgcaatttgattgttgaaagagtaggcaaaccattgaattaa 24177920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 42413 - 42369
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  42413 caggttgtagaataatcataggttaagtttcctatcaaatttggg 42369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 10379981 - 10379929
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  10379981 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 10379929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 12917292 - 12917368
Alignment:
Q  54 gaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaa 129  Q
    ||||| ||| |||||||| |||||||||||||||| |||| |||| ||| | | ||| ||||| |||||||||||||    
T  12917292 gaattcaaccaatctaagataagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 12917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 12917540 - 12917604
Alignment:
Q  288 aattggggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggc 352  Q
    |||||||||||| ||| |||||| ||||| | ||| |||| || ||||||||||||| |||||||    
T  12917540 aattggggtttttgggggaaaacaggtttcttcccatagaactttctgtcattgctcgccacggc 12917604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 14152398 - 14152474
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    |||||||||||||||||||| | |||| |||| ||||| | ||| ||||| |||||||||||||  |||||| ||||    
T  14152398 ctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaaccttgtagttgtt 14152474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 20629512 - 20629564
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  20629512 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 20629564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 22841265 - 22841341
Alignment:
Q  54 gaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaa 129  Q
    ||||| ||| ||||||| ||||||||||||||| | |||| |||| ||| | | ||||||||| |||||||||||||    
T  22841265 gaattcaaccaatctaatgtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 22841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 24514325 - 24514273
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  24514325 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 24514273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 25201954 - 25201891
Alignment:
Q  294 ggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgagtga 358  Q
    |||||| || ||||||||| ||||| || |||||||| |||||||| |||| |||||||||||||    
T  25201954 ggtttttggctgaaaactg-tttatccctgtagagctgtctgtcatcgctcgccacggcgagtga 25201891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 43549822 - 43549866
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  43549822 caggttgtagaataatcataggttaagtttcctatcaaatttggg 43549866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 46722753 - 46722797
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  46722753 caggttgtagaataatcataggttaagtttcctatcaaatttggg 46722797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 46823103 - 46823051
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  46823103 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 46823051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 55291768 - 55291812
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  55291768 caggttgtagaataatcataggttaagtttcctatcaaatttggg 55291812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 55318624 - 55318676
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  55318624 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 55318676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 26 - 357
Target Start/End: Original strand, 38400 - 38738
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    |||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  38400 gagaagaatggaaagcttgtagaatccagaatttaaccaatctaaggtaagggtgtgactaaccttctttaatcatgagtatataattctgaaaaagggt 38499  T
Q  126 ttaattttgtagctgttgataattttgatgttatagaagttagg-gttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnn 224  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||  || |||| ||||||||||||| |||||||||||||||||||||||||| ||       
T  38500 ttaattttgtagttgttaatagttttgatgttatagaagttaggttttaaattacaatttgattgttgaaagtgtaggtaatccaatgaattaacat-ga 38598  T
Q  225 nnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattggggttttggggtgaaaactggttta 317  Q
        |||| | |||||||| |||||||||||||||||||||| | ||||       ||||||||||||| |||||||||||| ||||||||||||||||     
T  38599 aaattgatgttcaggttgtggaataacaataggtaatgtttcttgtcaaatttgagatttgggtagttgaaattggggtttttgggtgaaaactggtttc 38698  T
Q  318 tgcccgtagagctatctgtcattgctcaccacggcgagtg 357  Q
    |||||||| ||||  ||||||| |||| ||||||||||||    
T  38699 tgcccgtatagctgcctgtcatcgctcgccacggcgagtg 38738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 26 - 358
Target Start/End: Complemental strand, 3298 - 2961
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  3298 gagaagaagggaaagcttgtagaattcagaatttaaccaatctaaggtaagggtgggactaaccttctttaatcatgagtatataattatgaaaaagggt 3199  T
Q  126 ttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnn 225  Q
    |||||||||||| |||||||| |||||||||||||||||||||| || ||||||||||| |||||| |||||||||||||| |||||||||| |||        
T  3198 ttaattttgtagttgttgatagttttgatgttatagaagttaggtttaaattgcaatttaattgttgaaagtgtaggtaattcaatgaattagtat-aaa 3100  T
Q  226 nnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttggg---tag---ttgtaattggggttttggggtgaaaactggtttatg 319  Q
       |||| | | |||| |||||||| |||||| |||||||| |||||||||||||   |||    |  ||||||| |||| |||||||||||| ||| ||    
T  3099 aattgatgttctggttttagaataataataggcaatgtttcttatcaaatttgggatttaggaagttaaattgggatttttgggtgaaaactgatttctg 3000  T
Q  320 cccgtagagctatctgtcattgctcaccacggcgagtga 358  Q
    ||||| ||||||| |||||| |||| ||||| |||||||    
T  2999 cccgtcgagctatatgtcatcgctcgccacgacgagtga 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 26 - 344
Target Start/End: Complemental strand, 17199 - 16876
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  17199 gagaagaagggaaagcttgtagaattcagaatttaactaatctaaggtaagggtgggacgaatcttctttaatcatgagtatataattcttaaaaagggt 17100  T
Q  126 ttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnn 225  Q
    |||| ||||||| ||||||| | |||||| |||||||| ||||| || | |||||||||||||||| |||| ||||||||||||||||||||||||        
T  17099 ttaactttgtagttgttgat-agtttgatattatagaaattaggtttaatttgcaatttgattgttgaaagagtaggtaatccaatgaattaatat-aaa 17002  T
Q  226 nnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattggggttttggggtgaaaactggtttat 318  Q
       |||| | |||||||||||||||||||||  ||||||||||| |||       ||||||| ||||  ||||| | |||| ||||||||| ||||||||    
T  17001 aattgatgttcaggttgtagaataacaatagaaaatgtttcctaccaaatttgggatttgggaagttaaaattgtgatttttgggtgaaaaatggtttat 16902  T
Q  319 gcccgtagagctatctgtcattgctc 344  Q
    |||||||||| |||||||||| ||||    
T  16901 gcccgtagagatatctgtcatcgctc 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 26 - 344
Target Start/End: Complemental strand, 26730 - 26407
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  26730 gagaagaagggaaagcttgtagaattcagaatttaactaatctaaggtaagggtgggacgaatcttctttaatcatgagtatataattcttaaaaagggt 26631  T
Q  126 ttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnn 225  Q
    |||| ||||||| ||||||| | |||||| |||||||| ||||| || | |||||||||||||||| |||| ||||||||||||||||||||||||        
T  26630 ttaactttgtagttgttgat-agtttgatattatagaaattaggtttaatttgcaatttgattgttgaaagagtaggtaatccaatgaattaatat-aaa 26533  T
Q  226 nnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattggggttttggggtgaaaactggtttat 318  Q
       |||| | |||||||||||||||||||||  ||||||||||| |||       ||||||| ||||  ||||| | |||| ||||||||| ||||||||    
T  26532 aattgatgttcaggttgtagaataacaatagaaaatgtttcctaccaaatttgggatttgggaagttaaaattgtgatttttgggtgaaaaatggtttat 26433  T
Q  319 gcccgtagagctatctgtcattgctc 344  Q
    |||||||||| |||||||||| ||||    
T  26432 gcccgtagagatatctgtcatcgctc 26407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 28832 - 28499
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  28832 aagtcagagaagataagagctttgtgagaagaagggaaagcctgtagaattcagagtttaaccaatctaaggtaagagtgggactaaccttctttaatca 28733  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    | ||| ||||||||| |||||| ||||||| |||||| |||| ||| ||||  |||||||| | |||||||| ||||| |||||||||||| ||||||||    
T  28732 taagtatataattctgaaaaagcgtttaatcttgtagttgttaatagttttattgttataggaattagggttaaattgaaatttgattgttgaaagtgta 28633  T
Q  201 ggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattgg 293  Q
    ||||||| |||||||||| ||       |||| | ||||||||||||||| |||| |||||||||||| ||||       ||||||||||||| ||||||    
T  28632 ggtaatctaatgaattaacat-aaaaattgatgttcaggttgtagaataataatacgtaatgtttcctgtcaaatttgggatttgggtagttgaaattgg 28534  T
Q  294 ggttttggggtgaaaactggtttatgcccgtagag 328  Q
    |||||| | |||||||||||||| | |||||||||    
T  28533 ggtttttgtgtgaaaactggtttcttcccgtagag 28499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 7447 - 7709
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |    
T  7447 aagtcagagaacagaagagctttgtgaaaagaagggaaagcttgtagaattcagagtttaaccaatctaaggtaagggtgggactaaccttctttaatta 7546  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    ||||| ||| ||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||| || ||||| ||||||||||||  || ||||    
T  7547 tgagtatatgattctgaaaaagggtttaattttatagttgttgatagttttgatgttatagaagttaggttttaattgaaatttgattgttggaaatgta 7646  T
Q  201 ggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtt 264  Q
    || |||||||||||||||  |       |||| | |||||||||||||||||||||||||||||    
T  7647 ggaaatccaatgaattaacgt-gaaaattgatgttcaggttgtagaataacaataggtaatgtt 7709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 1884 - 2104
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  1884 aagtcagagaagagaagagctttgtaagaagaagggaaagcttgtagaattcagaatttaaccaatctaaggtaacggtgggactaaccttctttaatca 1983  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttag--ggttgaattgcaatttgattgttaaaagtg 198  Q
    ||||||||||||||| ||||||||||||||||||| | |||| |||||| |||||||| |||||||||    ||||||||||||  |||| || || |||    
T  1984 tgagtctataattctgaaaaagggtttaattttgttgttgttaataattgtgatgttaaagaagttagaattttgaattgcaataggattcttgaatgtg 2083  T
Q  199 taggtaatccaatgaattaat 219  Q
    || ||||||||||||||||||    
T  2084 taagtaatccaatgaattaat 2104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 134; Significance: 1e-69; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 25 - 275
Target Start/End: Complemental strand, 23708 - 23458
Alignment:
Q  25 tgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaaggg 124  Q
    ||||||||||||||| |||||||||| || ||||| || |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  23708 tgagaagaagggaaagcttgtagaatccaaaatttgaccaatctaaggtaagggtgggactgaccttctttaatcatgagtatataattctaaaaaaggg 23609  T
Q  125 tttaattttgtagctgttgataattttgatgttatagaagttagg-gttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnn 223  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||  || |||| |||||| |||||||||||||||||||||| |||||||||| ||      
T  23608 tttaattttgtagttgttaatagttttgatgttatagaagttaggttttaaattacaattttattgttaaaagtgtaggtaatcaaatgaattaacat-g 23510  T
Q  224 nnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaat 275  Q
         |||| | ||||||||||||||| ||||||||||||||||| ||||||    
T  23509 aaaattgattttcaggttgtagaataataataggtaatgtttcctgtcaaat 23458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 26739 - 26651
Alignment:
Q  107 tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaag 196  Q
    ||||||||| ||||||||||||| ||||||| ||||| ||  ||||||||||||||  ||||||||  |||| ||||| |||||||||||    
T  26739 tataattctgaaaaagggtttaactttgtagttgttgttagctttgatgttatagagattagggttagattg-aatttaattgttaaaag 26651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 26652 - 26591
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaat 219  Q
    |||||||||||||  |||||||||||||||| || |||||||| ||||||  ||||||||||    
T  26652 agaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaatctgatgaattaat 26591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 26 - 358
Target Start/End: Original strand, 59614 - 59952
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    |||||||||||||| |||||| |||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||    
T  59614 gagaagaagggaaagcttgtataatttagaacttaaccaatctaaggtaagggtgggtctaaccttctttaatcatgagtatataattctgaaaaagggt 59713  T
Q  126 ttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnn 225  Q
    |||| ||||||| |||||||| ||||||| |||||||| ||||| ||  ||||||||||||||||| |||  ||||||||||||||||||||||||        
T  59714 ttaactttgtagttgttgatagttttgatattatagaaattaggtttatattgcaatttgattgttgaaatagtaggtaatccaatgaattaatat-aaa 59812  T
Q  226 nnntgatatccaggttgtagaataacaataggtaatgtttcctatcaa-------atttgggtagttgtaattggggttttggggtgaaaactggtttat 318  Q
       |||| |  ||||||||||||||||||||  ||||||||||| |||       ||||||| ||||  |||| || ||||  |||||||| |||||| |    
T  59813 aattgatgtttaggttgtagaataacaatagacaatgtttcctaccaaatttgggatttgggaagttaaaattaggattttttggtgaaaattggtttct 59912  T
Q  319 gcccgtagagctatctgtcattgctcaccacggcgagtga 358  Q
     |||||| ||||||||||||| |||| ||||| |||||||    
T  59913 acccgtacagctatctgtcatcgctcgccacgacgagtga 59952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 7e-68; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 18459425 - 18459207
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  18459425 aagtcagagaagagaagagatttgtgagaagaagggaaagcttgtagaattcagagtttaaccaatctaaggtaagggtgggactaacctactttaatca 18459326  T
Q  101 tgagtctataattct-taaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgt 199  Q
    ||||| ||| |||||  ||||||||||||||||| ||| | || | | |||||||||||||||||||||| || ||||| |||||||||||| |||||||    
T  18459325 tgagtatatgattctgaaaaaagggtttaattttatagtttttaacagttttgatgttatagaagttaggttttaattgaaatttgattgttgaaagtgt 18459226  T
Q  200 aggtaatccaatgaattaa 218  Q
    ||| |||||||||||||||    
T  18459225 aggaaatccaatgaattaa 18459207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 107 - 355
Target Start/End: Original strand, 24506155 - 24506409
Alignment:
Q  107 tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaat 206  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||| || ||||| ||||| |||||| ||||||||||||||    
T  24506155 tataattctgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagttaggtttaaattgtaatttaattgttgaaagtgtaggtaat 24506254  T
Q  207 ccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttg-------ggtagttgtaattggggtttt 299  Q
    ||||||||||| |||       |||| | |  ||| |||||||| |||||| |||||||| |||||||||||       || ||||  ||||||| ||||    
T  24506255 ccaatgaattagtat-aaaaattgatgttcttgttttagaataataataggcaatgtttcttatcaaatttgggatttaggaagttaaaattgggatttt 24506353  T
Q  300 ggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgag 355  Q
     |||||||||||||||| ||||||| ||||||| |||||| |||  ||||||||||    
T  24506354 tgggtgaaaactggtttctgcccgtcgagctatatgtcatcgcttgccacggcgag 24506409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 1819018 - 1818853
Alignment:
Q  54 gaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttga 153  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||  |||||| |||| ||| ||||||    
T  1819018 gaattcaaccaatctaaggtaagggtgagactaaccttctttaatcatgagtatatagttctgaaaaagggtttaagcttgtagttgttaatagttttga 1818919  T
Q  154 tgttatagaagttagggttgaattgc-aatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||| |||||||| |||||| || ||||||||| |||| ||||||||| || ||||||||    
T  1818918 tgttatagaaattagggttaaattgcaaaattgattgttgaaagagtaggtaattcattgaattaa 1818853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31166361 - 31166187
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||| | ||||||||||| |||||||| |  |||||||| |||  |||||||| | || | | ||||||||||||||||| |||||||| ||||||||    
T  31166361 aagtcagataagagaagagcattgtgagagggcaagggaaagcttaaagaattcaaagttcatccaatctaaggtaagggtgagactaaccatctttaat 31166262  T
Q  99 catgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttg 173  Q
    ||||||||||||||||| ||||||||||||||||| | | ||||||||||| |||||||| ||||||| ||||||    
T  31166261 catgagtctataattctgaaaaagggtttaattttattgttgttgataattgtgatgttaaagaagttggggttg 31166187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 3006804 - 3007082
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||| ||||||||||||| |||||||| |  |||||||| |||  |||||||| | || | | ||||||||| ||| |||| ||||||||||||||||    
T  3006804 aagtcagagaagagaagagcattgtgagagggcaagggaaagcttaaagaattcaaagttcatccaatctaaggaaagagtggtactaaccttctttaat 3006903  T
Q  99 catgagt-ctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaa 195  Q
     |||||| |||||||| | ||||||||  ||| ||||  | ||||||||||| |||||||| |||||||| ||||  |||||||||||||||| || |||    
T  3006904 -atgagttctataattttgaaaaaggggctaactttgatgttgttgataattgtgatgttaaagaagttatggttttgaattgcaatttgattcttgaaa 3007002  T
Q  196 gtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatt 276  Q
    ||||| |||||||||||||||||| |       |||| |  |||||||||| ||||  |||||||||||||||||||||||    
T  3007003 gtgtaagtaatccaatgaattaatgt-gaaagttgatgtttaggttgtagagtaaccctaggtaatgtttcctatcaaatt 3007082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 95 - 277
Target Start/End: Complemental strand, 18982439 - 18982255
Alignment:
Q  95 taatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg---ttgaattgcaatttgattgtt 191  Q
    ||||||| ||| |||  |||| ||||||||||||||||||||| |||||||| |||||||| | ||||||||||||   || ||||||||||||||||||    
T  18982439 taatcataagtatatggttctgaaaaagggtttaattttgtagttgttgatagttttgatgctgtagaagttagggtttttaaattgcaatttgattgtt 18982340  T
Q  192 aaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaattt 277  Q
     |||| ||||||||||||||||| ||||||        ||| | ||||||||||||||||||| ||| ||||||||||||||||||    
T  18982339 gaaagcgtaggtaatccaatgaactaatataaaaatc-gatgttcaggttgtagaataacaatcggtgatgtttcctatcaaattt 18982255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 13285804 - 13285656
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtct-ataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||| |||||||   |||| | |||||| |||| ||||||||  ||    
T  13285804 aatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaaaggggtttaccattgttgttgttga-aattatgatgttaatga 13285706  T
Q  163 agtta-gggttgaattgcaatttgattgttaaaagtgtaggtaatccaat 211  Q
    | ||| |  ||||||| ||||||||||||| |||||||||||||||||||    
T  13285705 aattatgttttgaatttcaatttgattgttgaaagtgtaggtaatccaat 13285656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 25601326 - 25601477
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa-ttttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||| | ||||||||||| |||||||| ||  | ||||||| |||||||||||||  ||||||   |||| || |||| ||||||||||    
T  25601326 aatctaaggtaagggagagactaaccttcattaatcataagaatgtaattctgaaaaagggtttaacctttgta---gttgttagttttcatgttataga 25601422  T
Q  163 agttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    | ||||||||  |||| ||||| ||||||||||| ||||||||||||| |||||||    
T  25601423 aattagggttagattg-aatttaattgttaaaagagtaggtaatccaaagaattaa 25601477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 215
Target Start/End: Complemental strand, 35057600 - 35057448
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtct-ataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    |||||||||||| ||||||||||| ||||| ||||||| ||| | |||||||| |||| |||||||   |||| | |||||| |||| ||||||||  ||    
T  35057600 aatctaaggtaatggtgggactaatcttctataatcataagtttcataattctgaaaaggggtttaccattgttgttgttga-aattatgatgttaatga 35057502  T
Q  163 agttagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaat 215  Q
    | ||||| || ||||| ||||||||||||| |||||||||||||||||||||||    
T  35057501 aattaggttttgaatttcaatttgattgttgaaagtgtaggtaatccaatgaat 35057448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 18585627 - 18585519
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctat 270  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||| ||       |||| | |||||||||||||||||||| || ||||||| |||    
T  18585627 ttgaattgcaatttgattgttgaaagtgtatgtaattcaatgaattaacat-aagaattgatgttcaggttgtagaataacaatatgtgatgtttcttat 18585529  T
Q  271 caaatttggg 280  Q
    ||||||||||    
T  18585528 caaatttggg 18585519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 31734760 - 31734698
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||||||    
T  31734760 ctaaggtaagggtgggactaaccttctttaatcataagtatgtaattctgaaaaagggtttaa 31734698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 7217243 - 7217347
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagtt 166  Q
    |||||||||||||| |||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  ||||||||| ||||| ||    
T  7217243 ctaaggtaagggtgagactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggtttgatgttgtagaa-tt 7217341  T
Q  167 agggtt 172  Q
    ||||||    
T  7217342 agggtt 7217347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 25922057 - 25921957
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttataga 162  Q
    |||||||||||||||||||||||||||| ||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||    
T  25922057 aatctaaggtaagggtgggactaaccttatttaatcataagtatgtaatcctaaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaga 25921958  T
Q  163 a 163  Q
    |    
T  25921957 a 25921957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 23431443 - 23431508
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    ||||||||||||| |||||||||||||||||||||||| ||| | |||| || |||||||||||||    
T  23431443 aatctaaggtaagcgtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaa 23431508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 357
Target Start/End: Complemental strand, 14993683 - 14993563
Alignment:
Q  244 agaataacaataggtaatgtttcctatcaaatttggg-------tagttgtaattggggttttggggtgaaaactggtttatgcccgtagagctatctgt 336  Q
    ||||| ||||||||||||||||||| |||||||||||       |||||| |||||||||||| |||||||||| ||||| | ||||||||  | ||| |    
T  14993683 agaattacaataggtaatgtttcctgtcaaatttgggatttgggtagttgaaattggggtttttgggtgaaaacaggtttcttcccgtagatttgtctat 14993584  T
Q  337 cattgctcaccacggcgagtg 357  Q
    ||| |||  ||||||||||||    
T  14993583 catcgcttgccacggcgagtg 14993563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 15998942 - 15998836
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||| ||||||| |||| ||||  | |||  ||||||||| |||||| ||||||  |||||| ||||| || |||||||||||||||| |    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttatagaaat 15998843  T
Q  166 tagggtt 172  Q
    |||||||    
T  15998842 tagggtt 15998836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 32259901 - 32259793
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataa-ttttgatgttataga 162  Q
    ||||| ||||||||||| |||||||||||||||||||| ||| | |||| || |||||| ||||||  |||||| | || |||| |||||||||| ||||    
T  32259901 aatcttaggtaagggtgtgactaaccttctttaatcataagtatgtaatcctgaaaaagagtttaaccttgtagtttttaataagttttgatgttgtaga 32259802  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  32259801 a-ttagggtt 32259793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 18455072 - 18455147
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    ||||||||||||||||| ||||||||||||||||| ||| | |||| || ||||||| |||||  |||||| ||||    
T  18455072 ctaaggtaagggtgggagtaaccttctttaatcataagtatgtaatcctgaaaaaggttttaaccttgtagttgtt 18455147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 21683074 - 21683170
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaa 163  Q
    |||||||||||||||||||| | |||| |||| ||| | | ||||||||  |||||||||||||  |||||| ||||| || ||||||||||||||||    
T  21683074 ctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgttg-tagttttgatgttatagaa 21683170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 22557300 - 22557204
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaa 163  Q
    ||||||||||||||||| ||||||||||| ||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| |||||    
T  22557300 ctaaggtaagggtgggagtaaccttcttt-atcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 22557204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 34140452 - 34140548
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatag 161  Q
    |||||||||||||||||||||| | ||||| |||| ||| || ||||||| | |||   |||||||| |||||| ||||| || ||||||||||||||    
T  34140452 aatctaaggtaagggtgggact-agcttctctaataatgggtttataattttgaaatctggtttaatcttgtagttgttgttagttttgatgttatag 34140548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 23993071 - 23993019
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||||||||| ||||    
T  23993071 taaggtaagggtgggactaacattcaataatcttgagtctataattctgaaaa 23993019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Original strand, 12041619 - 12041650
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  12041619 ctaaggtaagggtgggactaaccttctttaat 12041650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 34153068 - 34153164
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatag 161  Q
    |||||||||||||||||||||| | ||||| |||| ||| || ||||||| | |||   | |||||| |||||| ||||| || ||||||||||||||    
T  34153068 aatctaaggtaagggtgggact-agcttctctaataatgggtttataattttgaaatctgttttaatcttgtagttgttgttagttttgatgttatag 34153164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 13765232 - 13765188
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  13765232 caggttgtagaataatcataggttaagtttcctatcaaatttggg 13765188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 16246271 - 16246223
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattct 115  Q
    ||||||||||||||||||||||||||  |||| |||||| | |||||||    
T  16246271 ctaaggtaagggtgggactaaccttcaataattatgagtttctaattct 16246223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 17027864 - 17027916
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  17027864 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 17027916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 22783176 - 22783124
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  22783176 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 22783124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 23956748 - 23956704
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  23956748 caggttgtagaataatcataggttaagtttcctatcaaatttggg 23956704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 25536057 - 25536005
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  25536057 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 25536005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 25689475 - 25689423
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  25689475 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 25689423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 25721147 - 25721095
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  25721147 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 25721095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 25753490 - 25753438
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  25753490 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 25753438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 25755660 - 25755608
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  25755660 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 25755608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 31021888 - 31021932
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  31021888 caggttgtagaataatcataggttaagtttcctatcaaatttggg 31021932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 31629857 - 31629913
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||| ||||||| |||  ||||| ||||||||| ||||| ||||    
T  31629857 aatctaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaa 31629913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 34964022 - 34963970
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  34964022 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 34963970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 280
Target Start/End: Original strand, 20516976 - 20517268
Alignment:
Q  8 agaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtct 107  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| |    
T  20516976 agaagagaagagctttgtgagaagaagggaaagcttgtagaattcagagtttaaccaatctaaggtaagggtgggactaaccttctttaatcataagtat 20517075  T
Q  108 ataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg---------------------ttgaattgcaatttga 186  Q
    ||||||||  |||| ||||||||||||| | | ||||||||| |||||||| |||||||||||                     ||||||||||||||||    
T  20517076 ataattctagaaaatggtttaattttgttgttcttgataattgtgatgttaaagaagttagggttgtgaaaagaagttggggttttgaattgcaatttga 20517175  T
Q  187 ttgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    ||||| |||||||||||||||||||||||||||||        ||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  20517176 ttgttgaaagtgtaggtaatccaatgaattaatataaaaatc-gatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 20517268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 54 - 280
Target Start/End: Complemental strand, 20879538 - 20879313
Alignment:
Q  54 gaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttga 153  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||  |||| |||||||||||||  |||||| | || ||  ||||||    
T  20879538 gaattcaaccaatctaaggtaagggtgggactaaccttctttaatcataagtatatggttctaaaaaagggtttaagcttgtagttattaatggttttga 20879439  T
Q  154 tgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaa 253  Q
    ||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||| ||       |||| | ||||||||||||||||||    
T  20879438 tgttataaaagttagtgttaaattgcaaattgattgttaaaagtgtaggtaatccaatgaattaacat-aagaattgatgttcaggttgtagaataacaa 20879340  T
Q  254 taggtaatgtttcctatcaaatttggg 280  Q
    ||||||||||||||| |||||||||||    
T  20879339 taggtaatgtttcctgtcaaatttggg 20879313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 21678779 - 21678998
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||| | |||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||| |||| |    
T  21678779 aagtcagagaagatatgagcttcgtgagaagaagggaaaacttgtagaattcagagtttaaccaatctaaggtaagggtgggact-agcttctctaataa 21678877  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgta 200  Q
    || || ||||||| | ||| ||||||||| ||||||| |||||||| ||||||| |||||| | ||||| ||||||||||||| ||| ||| |||| |||    
T  21678878 tgggtttataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagcaattaggtttgaattgcaattggatggttgaaagagta 21678977  T
Q  201 ggtaatccaatgaattaatat 221  Q
    |||||| ||||||||||||||    
T  21678978 ggtaattcaatgaattaatat 21678998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 65 - 358
Target Start/End: Original strand, 21676590 - 21676888
Alignment:
Q  65 atctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaag 164  Q
    |||||||||||||||||||||| | |||| |||| ||| || ||||||| | ||| ||||||||| ||||||| |||||||| ||||||| ||||||||     
T  21676590 atctaaggtaagggtgggactagc-ttctctaataatgggtttataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagaaa 21676688  T
Q  165 ttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtt 264  Q
    ||||| || |||| ||||| ||  ||| |||| ||||||||||||||||||||||||       |||| | |||||||||||||||||||||  ||||||    
T  21676689 ttaggtttaaatttcaattggaaggttgaaagagtaggtaatccaatgaattaatat-aaaaattgatgttcaggttgtagaataacaatagacaatgtt 21676787  T
Q  265 tcctatcaa-------atttgggtagttgtaattggggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgagtg 357  Q
    ||||| |||       ||||||| ||||   |||||| |||| |||||||||||||||| |||| | |||||||||| |||| ||||||||||| |||||    
T  21676788 tcctaccaattttaggatttgggaagttaatattgggatttttgggtgaaaactggtttttgcctgaagagctatctatcatcgctcaccacggtgagtg 21676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22708255 - 22708477
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||| ||||||||| ||| |||||||| |  |||||||| |||  |||||||| | || | | |||||||||||||||||||||||||||||||||||    
T  22708255 aagtcagagaagagaatagcattgtgagagggcaagggaaagcttaaagaattcaaagttcatccaatctaaggtaagggtgggactaaccttctttaat 22708354  T
Q  99 catgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg--ttgaattgcaatttgattgttaaaa 195  Q
     ||||| ||||||||||| ||||||||  ||| ||||  | ||||||||||| |||||||| |||||||||||  || ||||||||||||||| || |||    
T  22708355 -atgagttctataattctaaaaaaggggctaactttgatgttgttgataattgtgatgttaaagaagttagggttttaaattgcaatttgattcttgaaa 22708453  T
Q  196 gtgtaggtaatccaatgaattaat 219  Q
    ||||| ||||| ||||||||||||    
T  22708454 gtgtaagtaatacaatgaattaat 22708477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 21676433 - 21676585
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| |||| | |||||||||||||||||||||| | ||||| |||| |    
T  21676433 aagtcagagaagagaagagctttctgagaagaagggaaatcttgtagaattcagagtttagccaatctaaggtaagggtgggact-agcttctctaataa 21676531  T
Q  101 tgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgat 154  Q
    || || ||||||| | ||| ||||||||| ||||||| |||||||| |||||||    
T  21676532 tgggtttataattatgaaatagggtttaactttgtagttgttgatagttttgat 21676585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 22345071 - 22344966
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctat 270  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||        ||| | ||||||||||||||||||||||| |||||||||||    
T  22345071 ttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatc-gatgttcaggttgtagaataacaataggtgatgtttcctat 22344973  T
Q  271 caaattt 277  Q
    |||||||    
T  22344972 caaattt 22344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 22356731 - 22356626
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctat 270  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||        ||| | ||||||||||||||||||||||| |||||||||||    
T  22356731 ttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatc-gatgttcaggttgtagaataacaataggtgatgtttcctat 22356633  T
Q  271 caaattt 277  Q
    |||||||    
T  22356632 caaattt 22356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 42265636 - 42265710
Alignment:
Q  149 tttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatat 221  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  42265636 tttgatgttatagaagttagggttttgaattgcaatttgattgttgaaggtgtatgtaatccaatgaattaatat 42265710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 21514743 - 21514638
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagtt 166  Q
    |||||||||||||||||||   |||| |||| ||||||  |||||||||||||||||||||||  |||||| ||||| || |||||||||||||||| ||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 21514644  T
Q  167 agggtt 172  Q
    ||||||    
T  21514643 agggtt 21514638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 22474812 - 22474704
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttataga 162  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||    
T  22474812 aatctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaga 22474713  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  22474712 a-ttagggtt 22474704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 4380616 - 4380722
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||||||||||| |||| ||||  | |||  ||||||||| |||||||||||||  |||||| ||||| || |||||||||||||||| |    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 4380715  T
Q  166 tagggtt 172  Q
    |||||||    
T  4380716 tagggtt 4380722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 18816295 - 18816400
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagtt 166  Q
    ||||||||||||||||||| | |||| |||  ||| ||  ||||||||| |||||||||||||  |||||| ||||| || |||||||||||||||| ||    
T  18816295 taaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 18816394  T
Q  167 agggtt 172  Q
    ||||||    
T  18816395 agggtt 18816400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 21579206 - 21579310
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagtt 166  Q
    ||||||||||||| |||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||| ||    
T  21579206 taaggtaagggtgtgactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatatgttttgatgttgtagaa-tt 21579304  T
Q  167 agggtt 172  Q
    ||||||    
T  21579305 agggtt 21579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 12037164 - 12037260
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaa 163  Q
    |||||||||||||||||||||||| ||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| |||||    
T  12037164 taaggtaagggtgggactaaccttgtttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagcttttgatgttgtagaa 12037260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 29762868 - 29762964
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataa-ttttgatgttatagaa 163  Q
    |||||||||||||  ||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||| |||||||||| |||||    
T  29762868 taaggtaagggtgaaactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaa 29762964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 22610253 - 22610417
Alignment:
Q  54 gaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttg 152  Q
    ||||| ||| ||||||||||||||||||||||||| |||| |||| ||||| | ||| ||||| |||| ||||||||  |  ||  | ||| || |||||    
T  22610253 gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgtta--ttttgttagttttg 22610350  T
Q  153 atgttatagaagttagggttgaattg-caatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    ||||||||||| ||| |||| | |||  || ||||||||| |||| |||||||||||| ||||||||    
T  22610351 atgttatagaaattatggttaatttgtaaaattgattgttgaaagagtaggtaatccattgaattaa 22610417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 41680132 - 41680237
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    ||||||||| ||||||||||||||||||||||||| ||| | |||| || | |||||||||||  |||||| |||| |||  |||||||||| ||||| |    
T  41680132 ctaaggtaaaggtgggactaaccttctttaatcataagtatgtaatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtagaa-t 41680230  T
Q  166 tagggtt 172  Q
    |||||||    
T  41680231 tagggtt 41680237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 12577932 - 12577825
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa-ttttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||||||||||| |||| |||| ||   | ||||||||  |||||||||||||  ||| ||| ||||| || |||||||||||||||  |    
T  12577932 ctaaggtaagggtgggactaactttctctaataatagttgtataattccgaaaaagggtttaacctttatagttgttgttagttttgatgttatagagat 12577833  T
Q  166 tagggttg 173  Q
    ||||||||    
T  12577832 tagggttg 12577825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 17978415 - 17978520
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    ||||||||||||||||||||| ||||| ||||||| ||| | |||| || ||||||| |||||  |||||| |||| |||  |||||||||| ||||| |    
T  17978415 ctaaggtaagggtgggactaaacttctataatcataagtatgtaatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgttgtagaa-t 17978513  T
Q  166 tagggtt 172  Q
    |||||||    
T  17978514 tagggtt 17978520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 22208325 - 22208216
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatag 161  Q
    ||||||||||||||||||||||| | |||| |||| ||| | | ||||||||| |||||||||||||  |||||| |||| |||  |||||||||| |||    
T  22208325 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag 22208226  T
Q  162 aagttagggtt 172  Q
    || ||||||||    
T  22208225 aa-ttagggtt 22208216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 36305803 - 36305742
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaat 219  Q
    |||||||||||||  |||||||||||||||| || |||||||| ||||||| ||||||||||    
T  36305803 agaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaatccgatgaattaat 36305742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 36405128 - 36405206
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| | |||| | | ||||||||||||  |||||| ||||    
T  36405128 aatctaaggtaagggtgtgactaactttctttaatcataagtatgtaatccctgaaaagggtttaaccttgtagttgtt 36405206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 22610479 - 22610564
Alignment:
Q  274 atttgggtagttgtaattggggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgagtgat 359  Q
    |||||||| |||| || | ||||||| || ||||||| ||||| | |||||||| || |||||||| |||| ||||||||||||||    
T  22610479 atttgggtggttgaaaattgggtttttggctgaaaacaggtttcttcccgtagaactgtctgtcatcgctcgccacggcgagtgat 22610564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 19880707 - 19880615
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttgggtagttgtaattgggg-ttttggggtgaaaactggtttatgcccgtaga 327  Q
    |||| ||||||||||  ||||||   |||||||||||||||||||| | || |||||||| |||||| |||||||||||| | | ||||||||    
T  19880707 caggctgtagaataaacataggttgagtttcctatcaaatttgggttgatgaaattggggcttttggagtgaaaactggtctgttcccgtaga 19880615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 22484003 - 22483928
Alignment:
Q  54 gaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaa 129  Q
    ||||| ||| ||||||||||||| | ||||||||| |||| |||| ||||||  |||||||||||||||||||||||    
T  22484003 gaattcaaccaatctaaggtaagcg-gggactaactttctctaataatgagttgtataattcttaaaaagggtttaa 22483928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 24049456 - 24049400
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  24049456 aatctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 24049400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 19700214 - 19700183
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  19700214 ctaaggtaagggtgggactaaccttctttaat 19700183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 23419494 - 23419463
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  23419494 ctaaggtaagggtgggactaaccttctttaat 23419463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 27471731 - 27471778
Alignment:
Q  62 caaatctaaggtaagggtgggactaaccttctttaatcatgagtctat 109  Q
    ||||||||||||||||||||||||||| |||  ||||| |||||||||    
T  27471731 caaatctaaggtaagggtgggactaacattcaataatcttgagtctat 27471778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 36732411 - 36732506
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatag 161  Q
    |||||||||||||| ||||| | |||| |||| ||| ||  ||||||||| |||||| ||||||  |||||| ||||| || ||||||||||||||    
T  36732411 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttatag 36732506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 32810538 - 32810484
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  32810538 tctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 32810484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 20457524 - 20457479
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctat 109  Q
    ||||||||||||||||||||||||| |||  ||||| |||||||||    
T  20457524 aatctaaggtaagggtgggactaacattcaataatcttgagtctat 20457479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 1326445 - 1326497
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  1326445 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 1326497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 5852507 - 5852559
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  5852507 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 5852559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 8413915 - 8413959
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  8413915 caggttgtagaataatcataggttaagtttcctatcaaatttggg 8413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 11361359 - 11361307
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  11361359 taaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaa 11361307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 15202302 - 15202358
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||| ||||||| |||  ||||| ||||||||| ||||| ||||    
T  15202302 aatctaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaa 15202358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 16412635 - 16412687
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  16412635 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 16412687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 19882833 - 19882789
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  19882833 caggttgtagaataatcataggttaagtttcctatcaaatttggg 19882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 19897356 - 19897304
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  19897356 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 19897304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 21697507 - 21697610
Alignment:
Q  115 ttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatga 213  Q
    |||||||||||||||  |||||| |||| |||  ||||||||||| |||  ||||||||  |||| ||||| |||||| |||| |||||||| ||| |||    
T  21697507 ttaaaaagggtttaacattgtagttgttaataggttttgatgttaaagagattagggttatattg-aatttaattgttgaaagagtaggtaaaccattga 21697605  T
Q  214 attaa 218  Q
    |||||    
T  21697606 attaa 21697610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 92
Target Start/End: Original strand, 22317907 - 22317935
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttc 92  Q
    |||||||||||||||||||||||||||||    
T  22317907 aatctaaggtaagggtgggactaaccttc 22317935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 26454590 - 26454498
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttgggtagttgtaattgggg-ttttggggtgaaaactggtttatgcccgtaga 327  Q
    |||| ||||||||||  ||||||   |||||||||||||||||||| | || |||||||| |||||| |||||| ||||| | | ||||||||    
T  26454590 caggctgtagaataaacataggttgagtttcctatcaaatttgggttgatgaaattggggcttttggagtgaaatctggtctgttcccgtaga 26454498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 32122574 - 32122518
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    |||||||||||||||||| |||||| |||  ||||| ||||||||| ||||| ||||    
T  32122574 aatctaaggtaagggtggaactaacattcaataatcttgagtctatgattctgaaaa 32122518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 37609718 - 37609774
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||| ||||||| |||  ||||| ||||||||| ||||| ||||    
T  37609718 aatctaaggtaagggtgagactaacattcaataatcttgagtctatgattctaaaaa 37609774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 32023 - 31831
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||| ||| ||||| |||||||||    
T  32023 gagaagaagggaaagcttgtagaattcagagtttaactaatctaaggtaagggtgagactaaccatctttaatcatgagtatatgattctgaaaaagggt 31924  T
Q  126 ttaattttgtagctgttgataattttgatgttatagaagttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||| ||| |||| ||| |||||||||| ||||||||||| || ||||| ||||||||| || |||||||||  |||||||||||||||    
T  31923 ttaattttatagttgttaatagttttgatgttgtagaagttaggttttaattgaaatttgatttttgaaagtgtagaaaatccaatgaattaa 31831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 32100 - 32038
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaat 130  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  32100 taaggtaagggtggggctaaccttctttaatcatgagtatatgattctgaaaaagggtttaat 32038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 40094 - 40268
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  40094 aagtcagagaagaaaagagctttgtgagaagaagggaaagcttgtagaattcagagtttaaccaatctaaggtaagggtgggactaaccttctctaatca 40193  T
Q  101 tgagtct---ataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttagggtt 172  Q
    ||||| |   |||||||| |||||||||||||   ||||| |||||||| |||||||||||||||||||||||||    
T  40194 tgagtatataataattctaaaaaagggtttaaccatgtagttgttgatagttttgatgttatagaagttagggtt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 21404204 - 21404080
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatca 100  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  21404204 aagtcagagaagagaagagctttgtgagaagaagagaaaacttgtagaattcagaatttaaccaatctaaggtaaggatgggactaaccttctttaatca 21404105  T
Q  101 tgagtctataattcttaaaaagggt 125  Q
    ||||||||||||||| |||||||||    
T  21404104 tgagtctataattctgaaaaagggt 21404080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 21504205 - 21504040
Alignment:
Q  54 gaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttga 153  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| |||  |||| ||||||||||||| ||||||| ||||  || ||||||    
T  21504205 gaattcaaccaatctaaggtaaaggtgggactaaccttctttaatcataagtatatggttctgaaaaagggtttaagtttgtagttgttagtagttttga 21504106  T
Q  154 tgttatagaagttagggttgaa-ttgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||| |||||||| || |||||| || |||||| |||| |||||| ||||||||||||||    
T  21504105 tgttatagaaattagggttaaatttgcaaattcattgttgaaagagtaggtgatccaatgaattaa 21504040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 280
Target Start/End: Complemental strand, 17876018 - 17875897
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaatagg 257  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||       |||| | ||||||||||||||||||||||    
T  17876018 agaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacat-atgaattgatgttcaggttgtagaataacaatagg 17875920  T
Q  258 taatgtttcctatcaaatttggg 280  Q
    | ||||||| |||||||||||||    
T  17875919 tgatgtttcttatcaaatttggg 17875897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 14025803 - 14025897
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgtt 157  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| ||| |||||||||||    
T  14025803 aatctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagattttgatgtt 14025897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 18744930 - 18744821
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||  || |||||||||||||||    
T  18744930 aatctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttataga 18744831  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  18744830 aattagggtt 18744821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 1626917 - 1627069
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    |||||||||||||| |||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| || || |    
T  1626917 ctaaggtaagggtgtgactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgta-aaat 1627015  T
Q  166 tagggttgaattgc-aatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    ||| ||| | |||| || ||||||||| |||| |||||||| ||| ||||||||    
T  1627016 tagagtttatttgcaaaattgattgttgaaagagtaggtaaaccattgaattaa 1627069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 21398800 - 21398948
Alignment:
Q  72 gtaagggtgggactaaccttctttaatcatgagtctataattct-taaaaagggtttaa----ttttgtagctgttgataattttgatgttatagaagtt 166  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||    | |||| | ||||| || |||||||||||||||   |    
T  21398800 gtaagggtgggactaaccttctttaatcatgagtgtataattctgaaaaaagggtttaacctttgttgttgttgttgttagttttgatgttatagagaat 21398899  T
Q  167 agggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaatta 217  Q
    ||||| | |||| ||||| ||||| ||||| |||||||||| ||| |||||    
T  21398900 agggtag-attg-aatttaattgtcaaaagagtaggtaatctaattaatta 21398948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 16063807 - 16063709
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatag 161  Q
    ||||||||||||||||||||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||| || ||||||||||||||    
T  16063807 aatctaaggtaagggtgggactacctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttatag 16063709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 26750084 - 26749979
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataa-ttttgatgttatagaagt 165  Q
    |||||||||||||| |||||||||| ||||||||| ||| |||||| || |||| ||||||||  |||||| |||| |||| |||||||||| ||||| |    
T  26750084 ctaaggtaagggtgagactaaccttttttaatcataagtatataatcctgaaaaggggtttaaccttgtagttgttaataagttttgatgttgtagaa-t 26749986  T
Q  166 tagggtt 172  Q
    |||||||    
T  26749985 tagggtt 26749979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 26762455 - 26762350
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    ||||||||||||||||||||||||||||||||||| | | | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||| |    
T  26762455 ctaaggtaagggtgggactaaccttctttaatcataattatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa-t 26762357  T
Q  166 tagggtt 172  Q
    |||||||    
T  26762356 tagggtt 26762350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 30138174 - 30138234
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||  ||||||||||||||||||| |||||||||| |||||||||||||||    
T  30138174 agaagttagggttttgaattgcaatttgattgttgaaagtgtaggcaatccaatgaattaa 30138234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 31456799 - 31456752
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  31456799 ttgaattgcaatttgattgttgaaagtgtaggtaattcaatgaattaa 31456752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 23199207 - 23199312
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagtt 166  Q
    ||||||||||||||||||| | |||| |||| ||| ||  ||||||||| ||||| |||||||  |||||| ||||  || |||||||||||||||| ||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaaccttgtagttgttagtagttttgatgttatagaaatt 23199306  T
Q  167 agggtt 172  Q
    ||||||    
T  23199307 agggtt 23199312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 6551286 - 6551384
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatag 161  Q
    ||||||||||||||||| ||||||| |||| ||||  | |||  ||||||||| |||||||||||||  |||||| ||||| ||  |||||||||||||    
T  6551286 aatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagatttgatgttatag 6551384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 8833209 - 8833267
Alignment:
Q  71 ggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    ||||||||||||||| ||||||||||||||| ||| | |||| || |||||||||||||    
T  8833209 ggtaagggtgggactgaccttctttaatcataagtatgtaatcctgaaaaagggtttaa 8833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 8503888 - 8503992
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagtt 166  Q
    ||||||||||||||||||||||||||| |||||| ||| | |||| || || ||| ||||||  |||||| |||| |||  |||||||||| ||||| ||    
T  8503888 taaggtaagggtgggactaaccttcttcaatcataagtatgtaatcctgaacaagagtttaaccttgtagttgttaataggttttgatgttgtagaa-tt 8503986  T
Q  167 agggtt 172  Q
    ||||||    
T  8503987 agggtt 8503992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 358
Target Start/End: Complemental strand, 20313114 - 20313029
Alignment:
Q  274 atttgggtagttgtaattggggttttggggtgaaaa-ctggtttatgcccgtagagctatctgtcattgctcaccacggcgagtga 358  Q
    |||||||| |||| || | ||||||| || |||||| ||||||| | ||||||||||| |||||||| |||||||||| |||||||    
T  20313114 atttgggtggttgaaaattgggtttttggctgaaaaactggtttcttcccgtagagctgtctgtcatcgctcaccacgacgagtga 20313029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 36508847 - 36508894
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    ||||||||||||||||||||| |||| ||||||||||  |||||||||    
T  36508847 ttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaa 36508894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 2153952 - 2154004
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  2153952 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 2154004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 17516290 - 17516342
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  17516290 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 17516342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 27868741 - 27868785
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  27868741 caggttgtagaataatcataggttaagtttcctatcaaatttggg 27868785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 29330815 - 29330763
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  29330815 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 29330763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 33472730 - 33472774
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  33472730 caggttgtagaataatcataggttaagtttcctatcaaatttggg 33472774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 49785 - 49658
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |   |||||||| ||||||||||||||||    
T  49785 aatctaaggtaagggtgggactaaccttctttaatcatgagtccataattctgaaaaagggtttaattttatttttgttgatagttttgatgttatagaa 49686  T
Q  164 gttagggttgaattgcaatttgattgtt 191  Q
    |||||| | |||||||||||||||||||    
T  49685 gttaggttcgaattgcaatttgattgtt 49658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 85; Significance: 2e-40; HSPs: 6)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 112 - 280
Target Start/End: Original strand, 18902 - 19072
Alignment:
Q  112 ttcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg---ttgaattgcaatttgattgttaaaagtgtaggtaatcc 208  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||   || |||||||||||||||||| ||||||||||||||||    
T  18902 ttctgaaaaaaggtttaattttgtagttgttgatagttttgatgctatagaagttagggtttttaaattgcaatttgattgttgaaagtgtaggtaatcc 19001  T
Q  209 aatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||| ||||||        ||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  19002 aatgaactaatataaaaatc-gatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 19072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 16602 - 16718
Alignment:
Q  95 taatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg--ttgaattgcaatttgattgtta 192  Q
    ||||||| ||| |||  |||| |||||| |||||||||| ||| |||||||| |||||||| ||||||||||||||  || ||||||||||||||||||     
T  16602 taatcataagtatattgttctgaaaaagagtttaattttatagttgttgatagttttgatgctatagaagttagggttttaaattgcaatttgattgttc 16701  T
Q  193 aaagtgtaggtaatcca 209  Q
    |||||||||||||||||    
T  16702 aaagtgtaggtaatcca 16718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 158941 - 159074
Alignment:
Q  140 gttgataattttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatcca 237  Q
    ||||||||||| |||||||||||| || || ||  |||||| |||||||||||| || |||||||| |||||||||||||||||       |||| | ||    
T  158941 gttgataattt-gatgttatagaaattgggattttgaattgaaatttgattgttgaaggtgtaggtgatccaatgaattaatat-aaaaattgatgttca 159038  T
Q  238 ggttgtagaataacaataggtaatgtttcctatcaa 273  Q
    ||||||||| ||| |||| |||| ||||||||||||    
T  159039 ggttgtagagtaataataagtaaggtttcctatcaa 159074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 17422 - 17466
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  17422 caggttgtagaataacaataggtgatgtttccaatcaaatttggg 17466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 18697 - 18762
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggttta 128  Q
    |||||||||| ||||||||| |||| |||| |||| ||||||  ||||||||||||||| ||||||    
T  18697 aatctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggttta 18762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 92
Target Start/End: Original strand, 158818 - 158846
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttc 92  Q
    |||||||||||||||||||||||||||||    
T  158818 aatctaaggtaagggtgggactaaccttc 158846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 181 - 28
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||||||||||||||||||||||||| ||| |||  |||| ||||||||||| | ||||||| |||| ||| ||||||||||||||||||    
T  181 tctaaggtaagggtgggactaaccttctttaatcattagtatatggttctgaaaaagggttttaatttgtagttgttaatagttttgatgttatagaagt 82  T
Q  166 tagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||  ||||| || ||||||||| |||| ||||||||||||| |||||||    
T  81 tagggttaaaattgaaaattgattgttgaaagagtaggtaatccaaagaattaa 28  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 217
Target Start/End: Complemental strand, 28607 - 28454
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa-ttttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||  ||||||| ||||| || |||| ||||||||||    
T  28607 aatctaaggtaagagtgggactaaccttccttaatcatgagtatataattctgaaaaagggtttaacctttgtagttgttgttagtttttatgttataga 28508  T
Q  163 agttagggttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaatta 217  Q
      ||||||||  |||| ||||| ||||||||||| |||||||||||||| |||||    
T  28507 gattagggttagattg-aatttaattgttaaaagagtaggtaatccaattaatta 28454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 18041 - 18264
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||||||||||||||| | |||||||| |  |||||||| |||  ||||||||   || |   ||||||||||||| |||||||||||||||||||||    
T  18041 aagtcaaagaagagaagaacattgtgagagggcaagggaaagcttaaagaattcaatgttcattcaatctaaggtaagagtgggactaaccttctttaat 18140  T
Q  99 catgagtc-tataattcttaaaaagggtt-taattttgtagctgttgataattttgatgttatagaagttaggg--ttgaattgcaatttgattgttaaa 194  Q
     ||||||  ||||||||| ||||| ||   ||| ||||  | ||||||||||| |||||||| |||||||||||  |||||||| ||||||||| || ||    
T  18141 -atgagttatataattctaaaaaaaggagctaactttgatgttgttgataattgtgatgttaaagaagttagggttttgaattgtaatttgattattgaa 18239  T
Q  195 agtgtaggtaatccaatgaattaat 219  Q
    |||||| ||||||| ||||||||||    
T  18240 agtgtaagtaatccgatgaattaat 18264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 7157 - 7346
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||| |||| |||||||| ||||| || |  |||||||| |||  |||||||| | || | | ||||||||||||||||| |||||||||||||||||    
T  7157 aagtcagagaaaagaagagcattgtgtgagggcaagggaaagcttaaagaattcaaagttgatccaatctaaggtaagggtgagactaaccttctttaat 7256  T
Q  99 catgagt-ctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg--ttgaattgcaatttgatt 188  Q
       |||| |||||||| | |||||||   ||| ||||  | ||||||||||| |||||||| |||||||||||  ||||||||||||||||||    
T  7257 ---gagttctataattatgaaaaaggagctaactttgatgttgttgataattgtgatgttaaagaagttagggttttgaattgcaatttgatt 7346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 1290 - 1568
Alignment:
Q  1 aagtcaaagaagagaagagctttgtgagaag--aagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaat 98  Q
    |||||| ||||||||||||| |||||||| |  |||||||| |||  |||||||| | || | | |||||||||||||||||||||||||||||||||||    
T  1290 aagtcagagaagagaagagcattgtgagagggcaagggaaagcttagagaattcaaagttcatccaatctaaggtaagggtgggactaaccttctttaat 1389  T
Q  99 catgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagttaggg--ttgaattgcaatttgattgttaaaa 195  Q
     ||||| ||||||||||| |||||||   ||| ||||  | ||||||||||| |||||||| || |||||| |  || || |||||||||||| || |||    
T  1390 -atgagttctataattctgaaaaaggaactaactttgatgttgttgataattgtgatgttaaaggagttagagttttcaactgcaatttgattcttgaaa 1488  T
Q  196 gtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctatcaaatt 276  Q
    ||||| ||||||  |||||||||| |       |||| |  |||||||||| ||||  |||||||||||||||||||||||    
T  1489 gtgtaagtaatctgatgaattaatgt-gaaagttgatgtttaggttgtagagtaaccctaggtaatgtttcctatcaaatt 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 28456 - 28530
Alignment:
Q  149 tttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatat 221  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||||    
T  28456 tttgatgttatagaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaatccaatgaattaatat 28530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 9119 - 9011
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttataga 162  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||| |||||| |||| |||  |||||||||| ||||    
T  9119 aatctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtaga 9020  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  9019 a-ttagggtt 9011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 35591 - 35665
Alignment:
Q  149 tttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatat 221  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| || |||||| |||||||||||||||||||    
T  35591 tttgatgttatagaagttagggttttgaattgcaatttgattgttgaaggtgtagataatccaatgaattaatat 35665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 6419 - 6514
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa-ttttgtagctgttgataattttgatgttataga 162  Q
    |||||||||||||||||||||||||| |||||||| ||| | |||||| ||||||||||||||  ||||||| ||||| || |||||||||||||||    
T  6419 ctaaggtaagggtgggactaaccttcattaatcataagtatgtaattc-taaaaagggtttaacctttgtagttgttgttagttttgatgttataga 6514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 6898 - 7006
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctat 270  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||| ||       |||| | |||||||||||||||||||| || ||||||| |||    
T  6898 ttgaattgcaatttgattgttgaaagtgtatgtaattcaatgaattaacat-aagaattgatgttcaggttgtagaataacaatatgtgatgtttcttat 6996  T
Q  271 caaatttggg 280  Q
    ||||||||||    
T  6997 caaatttggg 7006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 22700 - 22752
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  22700 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 22752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 10445 - 10550
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||| |    
T  10445 ctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaacattgtagttgttaataggttttgatgttgtagaa-t 10543  T
Q  166 tagggtt 172  Q
    |||||||    
T  10544 tagggtt 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 2076 - 1967
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||| ||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||| || |||||||||||||||    
T  2076 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 1977  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  1976 aattagggtt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 3418 - 3527
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||| | |||| |||| ||| ||  ||| ||||| |||||||||||||  |||||| ||||| || |||||||||||||||    
T  3418 aatctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 3517  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  3518 aattagggtt 3527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 17936 - 18045
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||||| |||| ||||  | |||  ||||||||| ||||||| |||||  |||||| ||||| || |||||||||||||||    
T  17936 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttataga 18035  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  18036 aattagggtt 18045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 9927 - 9988
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggttta 128  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  9927 ctaaggtaagggtgggactaaccttctttaatcataagtatgtaattctgaaaaagggttta 9988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 33510 - 33445
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||    
T  33510 aatctaaggtaagggtgggactaaccttctttaatcataagtatttaatcctgaaaaagggtttaa 33445  T

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Target: scaffold0005 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 186192 - 186301
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||| ||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||| || |||||||||||||||    
T  186192 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 186291  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  186292 aattagggtt 186301  T

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Target: scaffold0462 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 1270 - 1174
Alignment:
Q  120 aagggtttaattttgtagctgttgataattttgatgttatagaagttagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaat 215  Q
    ||||||||||| |||||| |||||||||||||| |||||  ||| ||||| || ||||| ||||||| ||||| ||||| |||||||||||||||||    
T  1270 aagggtttaatcttgtagttgttgataattttgttgttaatgaaattaggttttgaatttcaatttggttgttgaaagtctaggtaatccaatgaat 1174  T

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Target: scaffold0462; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 6776 - 6680
Alignment:
Q  120 aagggtttaattttgtagctgttgataattttgatgttatagaagttagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaat 215  Q
    ||||||||||| |||||| |||||||||||||| |||||  ||| ||||| || ||||| ||||||| ||||| ||||| |||||||||||||||||    
T  6776 aagggtttaatcttgtagttgttgataattttgttgttaatgaaattaggttttgaatttcaatttggttgttgaaagtctaggtaatccaatgaat 6680  T

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Target: scaffold0401 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 8874 - 8799
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgtt 142  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| ||||    
T  8874 ctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagatgtt 8799  T

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Target: scaffold0308 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 13365 - 13291
Alignment:
Q  149 tttgatgttatagaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatat 221  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| ||  ||||||||| |||||||||| ||||    
T  13365 tttgatgttatagaagttagggttttgaattgcaatttgattgttgaagatgtaggtaacccaatgaattgatat 13291  T

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Target: scaffold0516 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 5304 - 5410
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||||||||||| |||| ||||  | |||  |||||||||||||||||||||||  |||||| ||||| |  |||||||||||||||  |    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagttgttgttcgttttgatgttatagatat 5403  T
Q  166 tagggtt 172  Q
    |||||||    
T  5404 tagggtt 5410  T

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Target: scaffold0439 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 4474 - 4369
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| |  ||||| |||||||  |||||| |||| |||  |||||||||| ||||| |    
T  4474 ctaaggtaagggtgggactaaccttctttaatcataagtatataatcccgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtagaa-t 4376  T
Q  166 tagggtt 172  Q
    |||||||    
T  4375 tagggtt 4369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 12188 - 12081
Alignment:
Q  171 ttgaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaatatnnnnnnntgatatccaggttgtagaataacaataggtaatgtttcctat 270  Q
    ||||||| ||| |||||||||||| | |||||||| |||||||||||| ||       |||| | |||||||||||||||  |||||| |||||||||||    
T  12188 ttgaatttcaaattgattgttaaa-gagtaggtaacccaatgaattaacataagaat-tgatgttcaggttgtagaataatcataggtgatgtttcctat 12091  T
Q  271 caaatttggg 280  Q
    ||||||||||    
T  12090 caaatttggg 12081  T

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Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 174274 - 174169
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    |||| |||||||||||||||||||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||| |    
T  174274 ctaaagtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa-t 174176  T
Q  166 tagggtt 172  Q
    |||||||    
T  174175 tagggtt 174169  T

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Target: scaffold0369 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 15612 - 15720
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||||||||||||||||||||| |||| |||| |||  |  ||| ||||| |||||||||||||  |||||| ||||| || |||||||||||||||    
T  15612 aatctaaggtaagggtgggactaac-ttctctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttataga 15710  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  15711 aattagggtt 15720  T

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Target: scaffold0247 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 1128 - 990
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatg-agtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagtt 166  Q
    ||||||||||||| ||||| | |||| |||| ||| | | ||||||||| |||||||||||||  |||||| ||||| || |||||||||| ||||| ||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaaccttgtagatgttgttagttttgatgttttagaaatt 1029  T
Q  167 agggttgaattgc-aatttgattgttaaaagtgtaggtaa 205  Q
    | |||| |||||| || |||||||||||||  ||||||||    
T  1028 atggtt-aattgcaaaattgattgttaaaatagtaggtaa 990  T

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Target: scaffold0205 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 5574 - 5676
Alignment:
Q  26 gagaagaagggaaaacttgtagaattcagaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggt 125  Q
    |||||||||||||| ||||||||||| || ||| ||  |||||||||||||||||||||| | ||||| |||| ||| || ||||||||| ||| ||| |    
T  5574 gagaagaagggaaagcttgtagaatttaggattcaatcaatctaaggtaagggtgggact-agcttctctaataatgggtttataattctgaaataggat 5672  T
Q  126 ttaa 129  Q
    ||||    
T  5673 ttaa 5676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 5849 - 5913
Alignment:
Q  294 ggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgagtga 358  Q
    |||||| || ||||||||||||| | ||||||||||| ||  |||| |||| |||||||||||||    
T  5849 ggtttttggctgaaaactggtttcttcccgtagagctgtcactcatcgctcgccacggcgagtga 5913  T

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Target: scaffold0676 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 2937 - 2839
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatag 161  Q
    ||||||||||||||||||||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||| || ||| ||||||||||    
T  2937 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagtttcgatgttatag 2839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 17517 - 17626
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatg-agtctataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    |||||||||||||||| |||||| | || | |||| ||| | | ||||||||| |||||||||||||  |||||| ||||| || ||||| |||||||||    
T  17517 aatctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgctgttataga 17616  T
Q  163 agttagggtt 172  Q
    | ||||||||    
T  17617 aattagggtt 17626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 19263 - 19154
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttataga 162  Q
    ||||||| ||||||||||||||||| |||| ||||  | |||  ||||||||| |||||||||||||  |||||| ||||  || |||||||||||||||    
T  19263 aatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttataga 19164  T
Q  163 agttagggtt 172  Q
    | | ||||||    
T  19163 aataagggtt 19154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 19110 - 19019
Alignment:
Q  124 gtttaattttgtagctgttgataattttgatgttatagaagttagggtt-gaattgcaatttgattgttaaaagtgtaggtaatccaatgaat 215  Q
    ||||||| |||||| |||||||||||||| || ||  ||| ||||| || ||||| ||||||||||||| || ||||||||||||||||||||    
T  19110 gtttaatcttgtagttgttgataattttgttggtaatgaaattaggttttgaatttcaatttgattgttgaa-gtgtaggtaatccaatgaat 19019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 62774 - 62709
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    |||||||||||||| || |||||||||||||||||||| ||| | |||| || |||||||||||||    
T  62774 aatctaaggtaaggatgagactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaa 62709  T

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Target: scaffold0061 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 14582 - 14674
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatg 155  Q
    ||||||||||||||||| ||||| | |||| |||| ||| ||  ||||||||| ||||||||||||| ||||||| ||||| || ||||||||    
T  14582 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatg 14674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 23640 - 23732
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatg 155  Q
    ||||||||||||||||| ||||| | |||| |||| ||| ||  ||||||||| ||||||||||||| ||||||| ||||| || ||||||||    
T  23640 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatg 23732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 57026 - 56970
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagg 123  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||| || |||||||    
T  57026 ctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagg 56970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 4988 - 4894
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa-ttttgtagctgttgataattttgatgttatag 161  Q
    ||||||||||||||||||| | |||| |||| |||  | |||||||||  ||||||||||||  ||||||| ||||| || ||||||||||||||    
T  4988 taaggtaagggtgggactagctttctctaataatggttgtataattctgtaaaagggtttaacctttgtagttgttgttagttttgatgttatag 4894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 398 - 293
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaattttgtagctgttgata-attttgatgttatagaagt 165  Q
    |||||||||||||| || ||| ||||||||||||| ||| | |||| || |||||||||||||  |||||| |||| |||  |||||||||| ||||| |    
T  398 ctaaggtaagggtgagattaatcttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa-t 300  T
Q  166 tagggtt 172  Q
    |||||||    
T  299 tagggtt 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 18328 - 18222
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaagggtttaattttgtagctgttgataattttgatgttatagaagt 165  Q
    |||||||||||||| ||||| | |||| |||| ||| ||  ||||||||| |||||||||||||  |||||| ||||| |  ||||||| |||||||| |    
T  18328 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttggttttgattttatagaaat 18229  T
Q  166 tagggtt 172  Q
    |||||||    
T  18228 tagggtt 18222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 5510 - 5445
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggttta 128  Q
    ||||||||||||||||||||||| | |||| |||| ||||| | ||||||||| ||||||||||||    
T  5510 aatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 14926 - 14885
Alignment:
Q  148 ttttgatgttatagaagttagggttgaattgcaatttgattg 189  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  14926 ttttgatgttatagaagttaggtttgaattgcaaattgattg 14885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 16946 - 16905
Alignment:
Q  148 ttttgatgttatagaagttagggttgaattgcaatttgattg 189  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  16946 ttttgatgttatagaagttaggtttgaattgcaaattgattg 16905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 9986 - 9926
Alignment:
Q  160 agaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||||||||  ||||||||||||||||||| |||| ||||||||||  |||||||||    
T  9986 agaagttagggttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaa 9926  T

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Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 22082 - 22023
Alignment:
Q  161 gaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    ||||||||||||  ||||||||||||||||||| |||| ||||||||||  |||||||||    
T  22082 gaagttagggttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaa 22023  T

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Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 22006 - 21962
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  22006 caggttgtagaataatcataggttaagtttcctatcaaatttggg 21962  T

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Target: scaffold0574 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 7297 - 7241
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  7297 aatctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 7241  T

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Target: scaffold0023 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 163219 - 163175
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  163219 caggttgtagaataacaataggtgatgttccttatcaaatttggg 163175  T

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Target: scaffold0671 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 4993 - 4962
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  4993 ctaaggtaagggtgggactaaccttctttaat 4962  T

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Target: scaffold0364 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 8049 - 8002
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttgggtag 283  Q
    |||||||||||||||  |||||| | ||||||||||||||||||||||    
T  8049 caggttgtagaataatcataggttaagtttcctatcaaatttgggtag 8002  T

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Target: scaffold0077 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 6003 - 5972
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  6003 ctaaggtaagggtgggactaaccttctttaat 5972  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 43773 - 43847
Alignment:
Q  54 gaatttaacaaatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaagggtttaa 129  Q
    ||||| ||| |||||||||||||||||||||| | ||||| |||| ||| || ||||||||| ||| |||||||||    
T  43773 gaattcaaccaatctaaggtaagggtgggact-agcttctctaataatgggtttataattctgaaatagggtttaa 43847  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 107317 - 107265
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  107317 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 107265  T

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Target: scaffold0035; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 115818 - 115766
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  115818 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 115766  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 398615 - 398584
Alignment:
Q  67 ctaaggtaagggtgggactaaccttctttaat 98  Q
    ||||||||||||||||||||||||||||||||    
T  398615 ctaaggtaagggtgggactaaccttctttaat 398584  T

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Target: scaffold0594 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 2303 - 2237
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaa 129  Q
    ||||||||||||||||||||||| | |||| |||| ||| | | ||||||||| |||||||||||||    
T  2303 aatctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaa 2237  T

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Target: scaffold0359 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 16387 - 16333
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||||| ||| |||||| | ||||||| ||||| ||||    
T  16387 tctaaggtaagggtgggactaacattcattaatcttaagtctattattctgaaaa 16333  T

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Target: scaffold0220 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 14005 - 13911
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaattttgtagctgttgataattttgatgtt 157  Q
    ||||||||||||||||||||||| | |||| |||| ||| | | || |||||| |||||||||||||  ||| || ||||| || ||||||||||    
T  14005 aatctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaaccttgaagttgttgttagttttgatgtt 13911  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 21509 - 21441
Alignment:
Q  152 gatgttatagaagttagggtt--gaattgcaatttgattgttaaaagtgtaggtaatccaatgaattaa 218  Q
    |||||||  ||||||||||||  |||||||||||| |||||| |||| ||||||||||  |||||||||    
T  21509 gatgttaatgaagttagggttttgaattgcaatttcattgttgaaagagtaggtaatctgatgaattaa 21441  T

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Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 34338 - 34286
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  34338 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 34286  T

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Target: scaffold1792 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 1200 - 1148
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  1200 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 1148  T

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Target: scaffold0711 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 6897 - 6949
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  6897 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 6949  T

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Target: scaffold0411 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 92
Target Start/End: Original strand, 13413 - 13441
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttc 92  Q
    |||||||||||||||||||||||||||||    
T  13413 aatctaaggtaagggtgggactaaccttc 13441  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 18636 - 18731
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttctttaatcatgagt--ctataattcttaaaaagggtttaattttgtagctgttgataattttgatgtt 157  Q
    ||||||||||||||||||||||| | |||| |||| ||||||    |||||| | ||||| |||||||  |||||| ||||| || ||||||||||    
T  18636 aatctaaggtaagggtgggactagctttctctaataatgagttgtaataattttgaaaaaaggtttaaccttgtagttgttgttagttttgatgtt 18731  T

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Target: scaffold0322 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 18779 - 18727
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  18779 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 18727  T

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Target: scaffold0297 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 2918 - 2970
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  2918 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 2970  T

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Target: scaffold0191 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 3662 - 3610
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  3662 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 3610  T

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Target: scaffold0175 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 92
Target Start/End: Complemental strand, 8698 - 8670
Alignment:
Q  64 aatctaaggtaagggtgggactaaccttc 92  Q
    |||||||||||||||||||||||||||||    
T  8698 aatctaaggtaagggtgggactaaccttc 8670  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 20686 - 20634
Alignment:
Q  68 taaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaa 120  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| ||||| ||||    
T  20686 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaa 20634  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 127577 - 127641
Alignment:
Q  293 gggttttggggtgaaaactggtttatgcccgtagagctatctgtcattgctcaccacggcgagtg 357  Q
    ||||||| || ||||||| ||||| | |||||||| || |||||||| |||| ||||||||||||    
T  127577 gggtttttggctgaaaacaggtttcttcccgtagaactgtctgtcatcgctcgccacggcgagtg 127641  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 66070 - 66134
Alignment:
Q  66 tctaaggtaagggtgggactaaccttctttaatcatgag-tctataattcttaaaaagggtttaa 129  Q
    |||||||||||||||||||||   ||||||||| ||| | | ||||||||| |||||||||||||    
T  66070 tctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaaaagggtttaa 66134  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 169325 - 169281
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  169325 caggttgtagaataatcataggttaagtttcctatcaaatttggg 169281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 176678 - 176634
Alignment:
Q  236 caggttgtagaataacaataggtaatgtttcctatcaaatttggg 280  Q
    |||||||||||||||  |||||| | |||||||||||||||||||    
T  176678 caggttgtagaataatcataggttaagtttcctatcaaatttggg 176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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