View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9832_low_10 (Length: 330)

Name: NF9832_low_10
Description: NF9832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9832_low_10
NF9832_low_10
[»] chr7 (42 HSPs)
chr7 (7-162)||(17923119-17923274)
chr7 (7-113)||(17926956-17927062)
chr7 (11-188)||(8562799-8562976)
chr7 (7-189)||(13448283-13448467)
chr7 (30-189)||(4485322-4485480)
chr7 (23-237)||(13352511-13352729)
chr7 (7-189)||(9251045-9251226)
chr7 (7-189)||(9319023-9319204)
chr7 (44-189)||(45150192-45150339)
chr7 (44-189)||(9723298-9723445)
chr7 (7-189)||(33560252-33560434)
chr7 (45-189)||(10331998-10332142)
chr7 (30-184)||(21675231-21675387)
chr7 (7-176)||(14268334-14268501)
chr7 (44-189)||(39285670-39285817)
chr7 (67-189)||(18079013-18079137)
chr7 (7-133)||(28392363-28392491)
chr7 (7-125)||(18150762-18150876)
chr7 (23-189)||(4439389-4439556)
chr7 (23-189)||(4446818-4446985)
chr7 (23-133)||(34240675-34240785)
chr7 (103-185)||(14942611-14942693)
chr7 (103-185)||(15370204-15370286)
chr7 (103-189)||(31501776-31501862)
chr7 (7-139)||(44304476-44304611)
chr7 (66-189)||(48357249-48357373)
chr7 (66-176)||(16920182-16920292)
chr7 (46-189)||(16914427-16914569)
chr7 (30-83)||(21537285-21537338)
chr7 (13-85)||(18363198-18363270)
chr7 (255-313)||(27866830-27866888)
chr7 (103-185)||(28722717-28722799)
chr7 (45-159)||(46474605-46474721)
chr7 (66-135)||(47480562-47480631)
chr7 (274-313)||(47317788-47317827)
chr7 (35-85)||(5435-5485)
chr7 (14-119)||(3050270-3050373)
chr7 (11-85)||(15977298-15977372)
chr7 (67-132)||(13378193-13378258)
chr7 (69-121)||(9611989-9612041)
chr7 (69-121)||(9839560-9839612)
chr7 (99-151)||(21537339-21537391)
[»] chr8 (40 HSPs)
chr8 (30-189)||(22723726-22723887)
chr8 (23-230)||(22888327-22888537)
chr8 (23-237)||(11600754-11600972)
chr8 (45-189)||(18041028-18041174)
chr8 (44-189)||(31590618-31590765)
chr8 (46-189)||(45558433-45558577)
chr8 (45-187)||(23218486-23218629)
chr8 (44-189)||(33172831-33172978)
chr8 (11-189)||(17502760-17502944)
chr8 (44-189)||(22496707-22496854)
chr8 (23-189)||(27232566-27232734)
chr8 (23-176)||(23151296-23151448)
chr8 (68-189)||(4234687-4234810)
chr8 (23-176)||(29307064-29307215)
chr8 (23-176)||(33610502-33610654)
chr8 (7-189)||(45464589-45464770)
chr8 (44-185)||(19330825-19330966)
chr8 (21-176)||(23350794-23350949)
chr8 (30-189)||(18260954-18261116)
chr8 (45-189)||(24552065-24552211)
chr8 (30-176)||(23158802-23158947)
chr8 (31-130)||(23150470-23150568)
chr8 (23-133)||(23242503-23242614)
chr8 (30-157)||(24908416-24908548)
chr8 (30-157)||(24910637-24910769)
chr8 (14-135)||(21493925-21494044)
chr8 (66-176)||(23837846-23837956)
chr8 (7-139)||(20175237-20175372)
chr8 (7-139)||(20219964-20220099)
chr8 (103-189)||(22745339-22745425)
chr8 (67-189)||(37651947-37652069)
chr8 (253-313)||(20086231-20086291)
chr8 (41-175)||(23225636-23225769)
chr8 (99-229)||(24240183-24240315)
chr8 (66-189)||(5855217-5855340)
chr8 (23-133)||(33529094-33529204)
chr8 (99-188)||(16002606-16002695)
chr8 (66-176)||(17285852-17285962)
chr8 (31-85)||(18829118-18829172)
chr8 (66-135)||(18613054-18613123)
[»] chr3 (36 HSPs)
chr3 (23-189)||(50313821-50313988)
chr3 (7-189)||(11638904-11639088)
chr3 (45-189)||(31411134-31411280)
chr3 (7-189)||(41662171-41662353)
chr3 (31-189)||(40038410-40038571)
chr3 (16-189)||(4161700-4161871)
chr3 (44-189)||(43427007-43427154)
chr3 (23-189)||(8605428-8605593)
chr3 (30-189)||(38375175-38375337)
chr3 (23-189)||(4145542-4145706)
chr3 (21-176)||(9590208-9590362)
chr3 (30-189)||(10913491-10913653)
chr3 (26-189)||(18970528-18970689)
chr3 (14-188)||(12530943-12531119)
chr3 (25-189)||(25103464-25103631)
chr3 (75-189)||(33368458-33368573)
chr3 (99-189)||(6224638-6224728)
chr3 (30-189)||(37914774-37914934)
chr3 (7-173)||(21166535-21166701)
chr3 (66-189)||(3575953-3576076)
chr3 (26-89)||(11403311-11403374)
chr3 (41-135)||(14285633-14285725)
chr3 (43-177)||(13311597-13311730)
chr3 (66-176)||(17205319-17205429)
chr3 (31-173)||(17586413-17586556)
chr3 (43-132)||(13300941-13301029)
chr3 (21-89)||(11514977-11515045)
chr3 (66-189)||(34560461-34560585)
chr3 (41-176)||(19306426-19306563)
chr3 (68-177)||(11881712-11881821)
chr3 (73-132)||(12032202-12032261)
chr3 (14-119)||(38168604-38168707)
chr3 (279-313)||(44006437-44006471)
chr3 (66-135)||(11476717-11476786)
chr3 (274-314)||(4950856-4950896)
chr3 (66-130)||(11060500-11060564)
[»] chr6 (34 HSPs)
chr6 (23-189)||(18506833-18507002)
chr6 (23-189)||(22582245-22582413)
chr6 (23-189)||(22585035-22585203)
chr6 (23-189)||(22589866-22590034)
chr6 (24-189)||(15004390-15004559)
chr6 (31-237)||(21931763-21931975)
chr6 (45-189)||(15889210-15889355)
chr6 (23-189)||(31467052-31467217)
chr6 (7-189)||(19854720-19854902)
chr6 (7-117)||(19175936-19176046)
chr6 (45-189)||(34967477-34967623)
chr6 (99-189)||(116604-116694)
chr6 (30-189)||(23223359-23223521)
chr6 (66-189)||(29157961-29158087)
chr6 (7-189)||(32352613-32352787)
chr6 (23-122)||(19171238-19171339)
chr6 (23-189)||(29605994-29606159)
chr6 (7-189)||(18733521-18733711)
chr6 (23-176)||(18629059-18629210)
chr6 (74-175)||(18381312-18381413)
chr6 (44-189)||(22461590-22461737)
chr6 (23-170)||(17082651-17082797)
chr6 (99-189)||(17013264-17013354)
chr6 (73-189)||(22848674-22848791)
chr6 (23-133)||(33537839-33537949)
chr6 (252-313)||(33820112-33820173)
chr6 (66-174)||(21623819-21623927)
chr6 (9-132)||(25920274-25920395)
chr6 (43-132)||(16887291-16887377)
chr6 (30-85)||(26519085-26519140)
chr6 (99-189)||(14152918-14153008)
chr6 (66-135)||(16299524-16299593)
chr6 (103-176)||(17547210-17547283)
chr6 (145-188)||(19175768-19175812)
[»] chr4 (30 HSPs)
chr4 (18-237)||(49072246-49072468)
chr4 (7-189)||(47467807-47467991)
chr4 (30-189)||(12133088-12133250)
chr4 (23-189)||(19559966-19560134)
chr4 (44-189)||(54362784-54362931)
chr4 (45-189)||(18235694-18235840)
chr4 (23-189)||(41255847-41256012)
chr4 (44-189)||(13589565-13589712)
chr4 (44-189)||(54398989-54399136)
chr4 (45-189)||(38765312-38765456)
chr4 (45-189)||(41916240-41916385)
chr4 (23-189)||(15012763-15012927)
chr4 (70-189)||(10236788-10236908)
chr4 (6-189)||(28428356-28428535)
chr4 (117-236)||(15213189-15213309)
chr4 (44-189)||(50219439-50219586)
chr4 (66-189)||(10375136-10375261)
chr4 (23-139)||(7185337-7185453)
chr4 (7-189)||(40904391-40904575)
chr4 (23-82)||(15213062-15213121)
chr4 (66-189)||(7964230-7964354)
chr4 (14-135)||(14499681-14499800)
chr4 (99-189)||(24238233-24238323)
chr4 (34-133)||(13441826-13441927)
chr4 (14-135)||(32460201-32460319)
chr4 (66-189)||(18277039-18277163)
chr4 (23-132)||(40885014-40885122)
chr4 (23-85)||(9652627-9652689)
chr4 (66-135)||(19021133-19021202)
chr4 (252-313)||(54734421-54734482)
[»] chr2 (23 HSPs)
chr2 (7-189)||(16292281-16292465)
chr2 (23-237)||(29114928-29115145)
chr2 (7-189)||(24278366-24278550)
chr2 (44-189)||(9638036-9638183)
chr2 (23-176)||(24885284-24885437)
chr2 (99-189)||(18537361-18537450)
chr2 (45-189)||(6095286-6095432)
chr2 (99-189)||(25595626-25595716)
chr2 (44-189)||(11010306-11010461)
chr2 (66-176)||(2155320-2155430)
chr2 (14-135)||(22284636-22284755)
chr2 (274-313)||(34456972-34457011)
chr2 (66-132)||(25306095-25306161)
chr2 (23-132)||(23821256-23821364)
chr2 (23-132)||(23830335-23830443)
chr2 (68-132)||(2739-2803)
chr2 (23-139)||(19660561-19660676)
chr2 (14-135)||(16936228-16936347)
chr2 (14-135)||(17006888-17007007)
chr2 (73-135)||(28030763-28030825)
chr2 (23-80)||(16446467-16446523)
chr2 (73-130)||(24086953-24087010)
chr2 (23-91)||(31145629-31145695)
[»] chr1 (25 HSPs)
chr1 (44-189)||(5767664-5767811)
chr1 (26-189)||(75893-76059)
chr1 (23-213)||(20838944-20839137)
chr1 (45-189)||(21195608-21195752)
chr1 (66-189)||(33397952-33398077)
chr1 (44-189)||(40435762-40435909)
chr1 (23-189)||(25094464-25094633)
chr1 (23-176)||(22142813-22142964)
chr1 (44-189)||(18851887-18852034)
chr1 (31-189)||(5470471-5470629)
chr1 (7-213)||(7322868-7323077)
chr1 (67-189)||(17609534-17609657)
chr1 (103-189)||(49996838-49996924)
chr1 (78-189)||(17023610-17023721)
chr1 (23-130)||(19603799-19603905)
chr1 (96-189)||(8537472-8537563)
chr1 (96-189)||(8602711-8602802)
chr1 (73-175)||(41219361-41219463)
chr1 (23-176)||(16646557-16646710)
chr1 (66-132)||(51627185-51627251)
chr1 (46-132)||(27675460-27675544)
chr1 (274-313)||(33216371-33216410)
chr1 (66-132)||(20177840-20177906)
chr1 (66-132)||(37233347-37233413)
chr1 (10-38)||(20348336-20348364)
[»] scaffold0452 (1 HSPs)
scaffold0452 (24-237)||(2258-2473)
[»] scaffold0148 (1 HSPs)
scaffold0148 (7-189)||(38164-38348)
[»] scaffold0057 (1 HSPs)
scaffold0057 (23-215)||(6427-6621)
[»] scaffold0004 (2 HSPs)
scaffold0004 (45-189)||(28102-28248)
scaffold0004 (7-189)||(86961-87145)
[»] scaffold0017 (1 HSPs)
scaffold0017 (44-237)||(13321-13517)
[»] chr5 (23 HSPs)
chr5 (23-227)||(11762972-11763180)
chr5 (23-189)||(21215913-21216081)
chr5 (44-189)||(19874364-19874511)
chr5 (44-189)||(16834791-16834938)
chr5 (7-189)||(21110355-21110537)
chr5 (7-189)||(26559284-26559458)
chr5 (45-189)||(22886224-22886368)
chr5 (66-189)||(21222128-21222251)
chr5 (44-189)||(23234004-23234153)
chr5 (23-189)||(6457208-6457375)
chr5 (23-189)||(29918673-29918840)
chr5 (99-189)||(23417849-23417939)
chr5 (45-163)||(11965964-11966084)
chr5 (7-173)||(5621248-5621414)
chr5 (23-176)||(5450289-5450441)
chr5 (99-175)||(32358756-32358832)
chr5 (73-135)||(7529572-7529634)
chr5 (23-133)||(37984033-37984142)
chr5 (73-132)||(23467122-23467181)
chr5 (66-176)||(32965231-32965342)
chr5 (66-135)||(17910163-17910232)
chr5 (66-174)||(24224865-24224974)
chr5 (253-313)||(3777714-3777774)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-189)||(32891-33064)
[»] scaffold0013 (2 HSPs)
scaffold0013 (11-237)||(6539-6766)
scaffold0013 (6-189)||(36084-36265)
[»] scaffold0022 (2 HSPs)
scaffold0022 (99-189)||(67515-67605)
scaffold0022 (23-189)||(132418-132583)
[»] scaffold0063 (1 HSPs)
scaffold0063 (55-189)||(43627-43763)
[»] scaffold0025 (2 HSPs)
scaffold0025 (23-189)||(86114-86279)
scaffold0025 (66-189)||(53939-54063)
[»] scaffold0598 (1 HSPs)
scaffold0598 (44-176)||(3856-3988)
[»] scaffold0165 (2 HSPs)
scaffold0165 (11-189)||(30571-30747)
scaffold0165 (99-189)||(22603-22693)
[»] scaffold0670 (1 HSPs)
scaffold0670 (99-189)||(7226-7316)
[»] scaffold0601 (1 HSPs)
scaffold0601 (30-189)||(357-519)
[»] scaffold0012 (1 HSPs)
scaffold0012 (31-237)||(180371-180570)
[»] scaffold0153 (1 HSPs)
scaffold0153 (67-189)||(9101-9225)
[»] scaffold0047 (1 HSPs)
scaffold0047 (7-189)||(19382-19566)
[»] scaffold0020 (1 HSPs)
scaffold0020 (23-185)||(108618-108781)
[»] scaffold0406 (1 HSPs)
scaffold0406 (44-189)||(14643-14791)
[»] scaffold0387 (1 HSPs)
scaffold0387 (23-174)||(457-609)
[»] scaffold0385 (1 HSPs)
scaffold0385 (30-189)||(12107-12268)
[»] scaffold0193 (1 HSPs)
scaffold0193 (99-189)||(5206-5296)
[»] scaffold0065 (1 HSPs)
scaffold0065 (109-189)||(67502-67582)
[»] scaffold0130 (1 HSPs)
scaffold0130 (7-189)||(26452-26634)
[»] scaffold0118 (1 HSPs)
scaffold0118 (14-135)||(33921-34040)
[»] scaffold0010 (1 HSPs)
scaffold0010 (55-132)||(31711-31786)
[»] scaffold0207 (1 HSPs)
scaffold0207 (23-135)||(11347-11457)
[»] scaffold0327 (1 HSPs)
scaffold0327 (68-176)||(6314-6422)
[»] scaffold0080 (1 HSPs)
scaffold0080 (102-189)||(23241-23326)
[»] scaffold0634 (1 HSPs)
scaffold0634 (7-189)||(6025-6207)
[»] scaffold0133 (1 HSPs)
scaffold0133 (99-189)||(25878-25968)
[»] scaffold0682 (1 HSPs)
scaffold0682 (66-135)||(8080-8149)
[»] scaffold0151 (1 HSPs)
scaffold0151 (99-176)||(21940-22017)
[»] scaffold0125 (1 HSPs)
scaffold0125 (66-135)||(43591-43660)
[»] scaffold0066 (2 HSPs)
scaffold0066 (41-133)||(45685-45775)
scaffold0066 (73-133)||(55071-55131)
[»] scaffold0116 (1 HSPs)
scaffold0116 (23-125)||(34266-34370)
[»] scaffold0028 (1 HSPs)
scaffold0028 (23-117)||(80242-80335)
[»] scaffold0335 (1 HSPs)
scaffold0335 (66-135)||(5097-5166)
[»] scaffold0146 (1 HSPs)
scaffold0146 (274-313)||(32330-32369)
[»] scaffold0521 (1 HSPs)
scaffold0521 (78-132)||(11784-11838)
[»] scaffold0361 (1 HSPs)
scaffold0361 (14-135)||(3845-3964)
[»] scaffold0347 (1 HSPs)
scaffold0347 (23-85)||(5023-5085)
[»] scaffold0205 (1 HSPs)
scaffold0205 (11-85)||(8643-8717)
[»] scaffold0016 (1 HSPs)
scaffold0016 (66-132)||(116048-116114)
[»] scaffold0218 (1 HSPs)
scaffold0218 (44-138)||(26938-27033)
[»] scaffold0173 (1 HSPs)
scaffold0173 (66-135)||(5881-5950)
[»] scaffold0123 (1 HSPs)
scaffold0123 (23-132)||(11564-11672)
[»] scaffold0643 (1 HSPs)
scaffold0643 (68-132)||(174-238)
[»] scaffold0260 (1 HSPs)
scaffold0260 (10-38)||(10659-10687)
[»] scaffold0231 (2 HSPs)
scaffold0231 (41-85)||(12216-12260)
scaffold0231 (142-189)||(12326-12374)
[»] scaffold0138 (1 HSPs)
scaffold0138 (68-132)||(21922-21986)
[»] scaffold0026 (1 HSPs)
scaffold0026 (23-106)||(89340-89420)


Alignment Details
Target: chr7 (Bit Score: 96; Significance: 5e-47; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 17923274 - 17923119
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt 106  Q
    |||||||||||||   |||||| |||||||||||||||||||||||| |||||||| | | ||| ||||||||||||| ||||| |||||||||||||||    
T  17923274 tttcgtgttagaagagtattttggtcattttgtaagtaagggtaatttagtaatttcatgatgaagattatttttagttcttagagtgaattattatttt 17923175  T
Q  107 attaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattat 162  Q
    | ||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  17923174 actaagttactagtgtggtaattagttttgagcgggtaagtgatcgtcgttattat 17923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 17927062 - 17926956
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt 106  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17927062 tttcgtgttagaatcatattttagtcattttgtaagtaagggtaatctagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt 17926963  T
Q  107 attaagt 113  Q
    |||||||    
T  17926962 attaagt 17926956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 8562799 - 8562976
Alignment:
Q  11 gtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttatta 110  Q
    ||||||||| | |||||| ||||||| || ||||||||||| | | |||||| | ||||||||||||||| |||||||| ||||||||||| ||||| ||    
T  8562799 gtgttagaagggtattttggtcatttggtgagtaagggtaaattattaatttcatggtgaggattatttt-agtgcttattgtgaattattgttttacta 8562897  T
Q  111 agttactagtgtggtaattagttttgaactagtaagtgatcgtcgttatta-ttttaccgttaagtgggtagaaacatt 188  Q
    ||||||||||||||||||||||| ||| |  |||||||||| |  |||||| ||||||||||||||| |||||||||||    
T  8562898 agttactagtgtggtaattagttgtgagccggtaagtgatcattattattatttttaccgttaagtgagtagaaacatt 8562976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 13448283 - 13448467
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | ||  || |||||||||| ||||| ||||||| |||||||| |||||||||||||||||||||| ||  |||| |||  ||||||    
T  13448283 tttcgtgttagaagggtaaattggtcattttgtgagtaaaggtaatttagtaatttcacggtgaggattatttttagtgtttcaagtgagaaccattatt 13448382  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| |||||||||||||||||||||| || |||    |||||||||||| ||  |||||||||||||||||| ||||||||||||    
T  13448383 ttactaagttactagtgtggtaattaattgtgagtcggtaagtgatcgttgtgtttattttaccgttaagtgagtagaaacattt 13448467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 4485480 - 4485322
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaatt 129  Q
    |||||||||| ||||||||||| | |||||||||  |||| ||||||||||||||  |||||| |||  ||||||||| ||||||||||||||||||| |    
T  4485480 gtcattttgtgagtaagggtaaattagtaattttt-ggtggggattatttttagtatttagtgagaaccattattttactaagttactagtgtggtaaat 4485382  T
Q  130 agttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||| ||| | ||||||||| ||| |||| ||||||||||||||| | ||||||||||||    
T  4485381 agttgtgagccagtaagtgaccgttgttagtattttaccgttaagcgtgtagaaacattt 4485322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 13352729 - 13352511
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattat--ttttagtgctt--agtgtgaattattattttattaagttacta 118  Q
    |||||| ||||||||||| |||||||||||| |||| ||| | |||||| |||||  |||||||| ||  |||| |||  ||| ||||| ||||||||||    
T  13352729 tattttggtcattttgtatgtaagggtaatttagtagtttcatggtgagaattatatttttagtgtttgaagtgagaaccatt-ttttactaagttacta 13352631  T
Q  119 gtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-cc 217  Q
    ||||||||||||||| ||| |  |||||||| ||   ||||||||||||| ||||||| |||| ||||||||||||| || |||||||||||||| | ||    
T  13352630 gtgtggtaattagttgtgagccggtaagtgaccgatattattattttaccattaagtgagtagtaacatttcgtgaatggtttagtaaatgggttaagcc 13352531  T
Q  218 cattaaggcattaatggtta 237  Q
    |||||||| ||||| |||||    
T  13352530 cattaaggaattaagggtta 13352511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 9251226 - 9251045
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    |||| |||||||| | || |||||||||||||| ||||||| ||||| ||||| || | ||||| |||||||||||||| ||  | || |||| ||||||    
T  9251226 tttcatgttagaagggtaatttagtcattttgtgagtaaggataatttagtaaattcatggtgatgattatttttagtgtttcaattgagaatcattatt 9251127  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||||||||||||||||||||||| ||| |  ||||||||   || ||||||||||||||||||| | ||||||||||||    
T  9251126 ttactaagttactagtgtggtaattagttgtgagccggtaagtga---tcattattattttaccgttaagagagtagaaacattt 9251045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 9319023 - 9319204
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    |||| |||||||| | || |||||||||||||| ||||||| ||||| ||||| || | ||||| |||||||||||||| ||  | || |||| ||||||    
T  9319023 tttcatgttagaagggtaatttagtcattttgtgagtaaggataatttagtaaattcatggtgatgattatttttagtgtttcaattgagaatcattatt 9319122  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||||||||||||||||||||||| ||| |  ||||||||   || ||||||||||||||||||| | ||||||||||||    
T  9319123 ttactaagttactagtgtggtaattagttgtgagccggtaagtga---tcattattattttaccgttaagagagtagaaacattt 9319204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 45150339 - 45150192
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt-ag-tgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | |||||||||||||||||||| || || || |||  ||||||||| |||||||||||| || ||||||||| ||| ||     
T  45150339 aagggtaatttagtaaattcatggtgaggattatttttagtgttttagatgagaaccattattttactaagttactagtttgttaattagttgtgagctg 45150240  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  45150239 gtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 45150192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 9723298 - 9723445
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||| ||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||| ||||||||| ||| |      
T  9723298 aaggataatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtgctaattagttgtgagccg 9723397  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||    
T  9723398 gtaagtgatcgttgttattattttaccgttaaatgagtagaaacattt 9723445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 33560434 - 33560252
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattt 105  Q
    ||||||||||||| | || ||| ||||||| || ||||||||||||| ||||| || | | |||||||||||||||||| || |||| |||  |||||||    
T  33560434 tttcgtgttagaagggtaatttggtcatttagtgagtaagggtaatttagtaaattcatg-tgaggattatttttagtgttttagtgagaaccattattt 33560336  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || ||||||||||||||||||||||||| |||    ||||||||| || |||| ||||||||| ||| ||| ||||||||||||    
T  33560335 tactaagttactagtgtggtaattagttgtgagtcggtaagtgatggttgttagtattttaccattaggtgagtagaaacattt 33560252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 10331998 - 10332142
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagt 143  Q
    ||||||||| |||||||||  | |||||||||||||||||  || |||| ||| |||||||||| ||||||||||||||||||| ||||| ||| |  ||    
T  10331998 agggtaatttagtaattttttg-tgaggattatttttagtattttagtgagaactattattttactaagttactagtgtggtaaatagttgtgagccggt 10332096  T
Q  144 aagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  10332097 aagtgaccgttgttagtattttaccgttaagtgtgtagaaacattt 10332142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 21675231 - 21675387
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaa 127  Q
    |||||||||||||||||||||| | |||||||| | ||||||| |||||| ||||  ||  |||| |||  |||||||||  ||||||||||||||||||    
T  21675231 gtcattttgtaagtaagggtaaattagtaatttcatggtgagggttatttgtagtttttcaagtgagaaccattattttaccaagttactagtgtggtaa 21675330  T
Q  128 ttagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaa 184  Q
    |||||| | | || |||||||||||| |||||||||||||| ||||||  |||||||    
T  21675331 ttagttgtaagctggtaagtgatcgttgttattattttaccattaagtcagtagaaa 21675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 14268334 - 14268501
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattt 105  Q
    ||||||||||||| | |||||| |||||||| ||||||||||||| | |||||||||  |||||||||||||||||| | || |||| |||  |||||||    
T  14268334 tttcgtgttagaagggtattttggtcatttt-taagtaagggtaaattagtaatttt--ggtgaggattatttttagagttttagtgagaaccattattt 14268430  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    || ||||||||||||||||| |||||| ||  ||   ||||||||||| |||  |||||||||||||||||    
T  14268431 tactaagttactagtgtggttattagtattttaccgttaagtgatcgttgttggtattttaccgttaagtg 14268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 39285670 - 39285817
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | ||||||||||| |||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||| ||| ||| |      
T  39285670 aagggtaatttagtaaattcatggtgaggattaattttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaatttgttatgagccg 39285769  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||  ||||||||||||| |||||||  ||||||||||||    
T  39285770 gtaagtgatcgctgttattattttactgttaagttagtagaaacattt 39285817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 18079013 - 18079137
Alignment:
Q  67 gtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    |||| |||||||||||||| ||  |||| || | ||||||||| |||||||||||||||||| |||||| ||| |  |||||||||||| ||||||||||    
T  18079013 gtgaagattatttttagtgtttcaagtgagattcattattttactaagttactagtgtggtagttagttgtgagccggtaagtgatcgtggttattattt 18079112  T
Q  165 taccgttaagtgggtagaaacattt 189  Q
     |||||||||||  |||||||||||    
T  18079113 caccgttaagtgaatagaaacattt 18079137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 28392491 - 28392363
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | || ||| ||| |||||| ||||||||||||| |||||||| | || ||||||||||||||||| ||  |||| |||  ||||||    
T  28392491 tttcgtgttagaagggtaatttggtcgttttgtgagtaagggtaatttagtaatttcatggcgaggattatttttagtgtttcaagtgagaaccattatt 28392392  T
Q  105 ttattaagttactagtgtggtaattagtt 133  Q
    ||| ||| |||||||||||||||||||||    
T  28392391 ttactaaattactagtgtggtaattagtt 28392363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 18150762 - 18150876
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt 106  Q
    ||||||||||||| | |||||||||||||||  | |  ||||||| | |||||||| | | |||||||||||||||||||||| ||||||||||||||||    
T  18150762 tttcgtgttagaagggtattttagtcatttt--acg--agggtaaattagtaatttcatgatgaggattatttttagtgcttaatgtgaattattatttt 18150857  T
Q  107 attaagttactagtgtggt 125  Q
    | ||||||| |||||||||    
T  18150858 actaagttattagtgtggt 18150876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 4439556 - 4439389
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| ||||||||||||||| |||||||| ||||  || |   |||||||||||||||||  ||  |||| ||| |||||||||| ||||||||||||    
T  4439556 tattttggtcattttgtaagtaggggtaatttagtagattcata-tgaggattatttttagtatttcaagtgagaactattattttactaagttactagt 4439458  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| |||||| ||| |  |||||||| ||| |||| ||||||||| ||||| | |||| |||||||    
T  4439457 gtggtagttagttgtgagcctgtaagtgaccgttgttagtattttacccttaagggagtagtaacattt 4439389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 4446985 - 4446818
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| ||||||||||||||| |||||||| ||||| || |   |||| ||||||||||||| ||  |||| ||| |||||||||| ||| ||||||||    
T  4446985 tattttggtcattttgtaagtaggggtaattgagtaaattcata-tgagaattatttttagtgtttcaagtgagaactattattttactaaattactagt 4446887  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| |||||| ||| |  |||| ||| ||| |||| ||||||| ||||||| | |||| |||||||    
T  4446886 gtggtagttagttgtgagccggtaaatgaccgttgttagtattttaacgttaagggagtagtaacattt 4446818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 34240675 - 34240785
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| ||||||||| | |||||||||| | ||| |||||  |||||||||||||||||||| || |||| ||| |||||||||| |||||||||||||    
T  34240675 tattttggtcattttggatgtaagggtaaattagtgattttt-ggtgaggattatttttagtgttttagtgagaactattattttactaagttactagtg 34240773  T
Q  122 tggtaattagtt 133  Q
    | ||||| ||||    
T  34240774 tagtaatgagtt 34240785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 14942693 - 14942611
Alignment:
Q  103 ttttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaac 185  Q
    ||||| ||||||||||||||||||||||||| ||| |  |||||||| | | |||| ||||||||||||||||| ||||||||    
T  14942693 ttttactaagttactagtgtggtaattagttgtgagccggtaagtgaccattgttagtattttaccgttaagtgtgtagaaac 14942611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 15370286 - 15370204
Alignment:
Q  103 ttttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaac 185  Q
    ||||| ||||||||||||||||||||||||| ||| |  |||||||| | | |||| ||||||||||||||||| ||||||||    
T  15370286 ttttactaagttactagtgtggtaattagttgtgagccggtaagtgaccattgttagtattttaccgttaagtgtgtagaaac 15370204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 31501862 - 31501776
Alignment:
Q  103 ttttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||| ||||||||||||||||||  ||||| ||| |  |||||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  31501862 ttttactaagttactagtgtggtagatagttgtgagccggtaagtgaccgttgttagtattttaccgttaagtgtgtagaaacattt 31501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 44304476 - 44304611
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaatttt-acggtgaggattatttttagtgctt--agtgtgaattattat 103  Q
    |||||||||||||   |||||| |||||| ||| ||||||||||||| |||| |||| | ||||||  |||||||||||  ||  |||| |||  |||||    
T  44304476 tttcgtgttagaaaagtatttttgtcattctgtgagtaagggtaatttagtatttttcatggtgagagttatttttagtaattctagtgagaaccattat 44304575  T
Q  104 tttattaagttactagtgtggtaattagttttgaac 139  Q
    |||| |||||||||||||||||||||| ||| ||||    
T  44304576 tttactaagttactagtgtggtaattaatttcgaac 44304611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 48357373 - 48357249
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattatttt-attaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    |||||| ||||||||||||| |||| | |||  |||||||| | ||||||||||||||||| |||||| ||  ||   ||||||||||| |||  |||||    
T  48357373 ggtgagaattatttttagtgtttagcgagaaccattatttttactaagttactagtgtggttattagtattttaccgttaagtgatcgttgttggtattt 48357274  T
Q  165 taccgttaagtgggtagaaacattt 189  Q
    |||||||||| | ||||||||||||    
T  48357273 taccgttaagagtgtagaaacattt 48357249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 16920292 - 16920182
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| ||||||||||||| |||||| |||  ||||||||| ||||||||||| || ||||||||| ||  ||   ||||||| ||| |||| ||||||    
T  16920292 ggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagggtagtaattagtattttaccgttaagtgaccgttgttagtatttt 16920193  T
Q  166 accgttaagtg 176  Q
    ||||| |||||    
T  16920192 accgtcaagtg 16920182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 189
Target Start/End: Original strand, 16914427 - 16914569
Alignment:
Q  46 gggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt-attaagttactagtgtggtaattagttttgaactagta 144  Q
    |||||| | |||||||||  |||||| |||| |||||||| |||||| |||  |||||||| | ||||||||||||||||| |||||| ||  ||   ||    
T  16914427 gggtaaattagtaatttt--ggtgagaattaattttagtgtttagtgagaaccattatttttactaagttactagtgtggttattagtattttaccgtta 16914524  T
Q  145 agtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||  || |||| ||||||||||||||| | ||||||||||||    
T  16914525 agtgactgttgttagtattttaccgttaagagtgtagaaacattt 16914569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 21537285 - 21537338
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttag 83  Q
    |||||||||| ||||||||||||| |||||||| | ||||||||||||||||||    
T  21537285 gtcattttgtgagtaagggtaatttagtaatttcatggtgaggattatttttag 21537338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 18363198 - 18363270
Alignment:
Q  13 gttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    ||||||| | ||||||||||||||||| || |||||||| | ||||||||||| |||||||||| || |||||    
T  18363198 gttagaagggtattttagtcattttgtgagcaagggtaaattagtaattttactgtgaggattaattgtagtg 18363270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 27866830 - 27866888
Alignment:
Q  255 atcaaaagtttcctaacggcacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    ||||||||| ||||||   |||| |||||||| ||||||||||||||||||||||||||    
T  27866830 atcaaaagtctcctaaaaacacaagtaaaatatttaaatgccctcagcggtagttaact 27866888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 28722799 - 28722717
Alignment:
Q  103 ttttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaac 185  Q
    ||||| ||||||||||| ||||||| ||||| | |||  |||||||| ||| |||| |||||||||||||| || ||||||||    
T  28722799 ttttactaagttactagagtggtaaatagttgtaaaccggtaagtgaccgttgttagtattttaccgttaaatgtgtagaaac 28722717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 46474721 - 46474605
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| |||||  ||| ||||| |||||||||||| | ||  || | ||| |||||||||| |||||||||||||| |||||||||| ||| |  |    
T  46474721 agggtaatttagtaaaattatggtgatgattatttttagcgtttcaagggagaactattattttactaagttactagtgtagtaattagttgtgagccgg 46474622  T
Q  143 taagtgatcgtcgttat 159  Q
    || |||||||| |||||    
T  46474621 tacgtgatcgttgttat 46474605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 47480562 - 47480631
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| |||  ||||||||| |||||||||||||| || |||||||||    
T  47480562 ggtgagaattatttttaatgtttagtgagaaccattattttactaagttactagtgtagtgattagtttt 47480631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 47317827 - 47317788
Alignment:
Q  274 cacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  47317827 cacaagtaaaatacttaaatgcccccagcggtagttaact 47317788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 5485 - 5435
Alignment:
Q  35 tttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    |||||||| |||||||| | | ||||||||| |||||||||||||||||||    
T  5485 tttgtaagcaagggtaaattattaattttactgtgaggattatttttagtg 5435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 3050373 - 3050270
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||| | |||||| ||||||| |  |||||||||||   |||||||||  |||| | ||||||||||||| |||||| |||  ||||||||| |||||    
T  3050373 ttagaagggtattttggtcatttagcgagtaagggtaaaatagtaatttt--ggtgtgaattatttttagtgtttagtgagaaccattattttactaagt 3050276  T
Q  114 tactag 119  Q
    ||||||    
T  3050275 tactag 3050270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 15977298 - 15977372
Alignment:
Q  11 gtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    ||||||||| | |||||| |||||||||| ||||||| ||| | |||||||| | ||||||  ||||||||||||    
T  15977298 gtgttagaagggtattttggtcattttgtgagtaaggttaaattagtaatttcatggtgagagttatttttagtg 15977372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 13378258 - 13378193
Alignment:
Q  67 gtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    ||||| ||||||||||||| ||| || |||  ||||||||| ||||||||||| || |||||||||    
T  13378258 gtgagaattatttttagtgtttaatgagaaccattattttactaagttactagggtagtaattagt 13378193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 9612041 - 9611989
Alignment:
Q  69 gaggattatttttagtgcttagtgtgaattattattttattaagttactagtg 121  Q
    ||||||||||||||||| |||||| |||   |||||||| |||||||||||||    
T  9612041 gaggattatttttagtgtttagtgagaaccgttattttactaagttactagtg 9611989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 9839612 - 9839560
Alignment:
Q  69 gaggattatttttagtgcttagtgtgaattattattttattaagttactagtg 121  Q
    ||||||||||||||||| |||||| |||   |||||||| |||||||||||||    
T  9839612 gaggattatttttagtgtttagtgagaaccgttattttactaagttactagtg 9839560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 21537339 - 21537391
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatc 151  Q
    ||||| ||| ||||||||||||||||||||||||| ||| |  ||||||||||    
T  21537339 attatcttactaagttactagtgtggtaattagttgtgagccggtaagtgatc 21537391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 22723887 - 22723726
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaa 127  Q
    |||||||||| ||||||||||||| |||||||| | ||||||||| |||||||||| ||  |||| |||   |||||||| |||||||||||||||||||    
T  22723887 gtcattttgtgagtaagggtaatttagtaatttcatggtgaggatcatttttagtgtttcaagtgagaaccgttattttactaagttactagtgtggtaa 22723788  T
Q  128 ttagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22723787 ttagttttgagccggtaggtgatcgtcgttattattttaccgttaagtgggtagaaacattt 22723726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 22888537 - 22888327
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| || ||||| |||||||||| |||| |||||||| | ||||||||  |||||||||| ||  |||| |||  ||||||||| ||||||||||||    
T  22888537 tattttggttattttctaagtaagggaaatttagtaatttcatggtgaggaacatttttagtgtttcaagtgagaaccattattttactaagttactagt 22888438  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-ccca 219  Q
    ||||||||||||| ||| |  ||||||||||||  ||||| ||||||||||||||| ||| |||||||| |||||||| |||||||||||||| |  |||    
T  22888437 gtggtaattagttgtgagccggtaagtgatcgttattattgttttaccgttaagtgagtacaaacattttgtgaacggtttagtaaatgggttaagtcca 22888338  T
Q  220 ttaaggcatta 230  Q
    |||||||||||    
T  22888337 ttaaggcatta 22888327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 11600972 - 11600754
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatttt-attaagttactag 119  Q
    |||||| |||||||||||||||||||||||| |||||||| |  | | ||||||||||  ||| ||  |||| |||  |||||||| | |||||||||||    
T  11600972 tatttttgtcattttgtaagtaagggtaatttagtaatttcataggggggattattttctgtgtttcaagtgagaaccattatttttactaagttactag 11600873  T
Q  120 tgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-ccc 218  Q
    |||||||||||||| ||| |  ||||||||||||  ||||||||||||||||||||||||||||| |||| || || || |||||||||||||| | |||    
T  11600872 tgtggtaattagttgtgagccggtaagtgatcgttattattattttaccgttaagtgggtagaaatatttggtaaatggtttagtaaatgggttaagccc 11600773  T
Q  219 attaaggcattaatggtta 237  Q
     |||||||||||| |||||    
T  11600772 gttaaggcattaagggtta 11600754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 18041028 - 18041174
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| ||||| || | |||||||||||| ||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |  |    
T  18041028 agggtaatttagtaaattcatggtgaggattatctttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccgg 18041127  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  18041128 taagtgatcgttgttattattttaccgttaagtgagtaaaaacattt 18041174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 31590765 - 31590618
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |      
T  31590765 aagggtaatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccg 31590666  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| ||  ||||||||||||||||||  |||||||||||    
T  31590665 gtaagtgatcgttgtatttattttaccgttaagtgaatagaaacattt 31590618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 189
Target Start/End: Original strand, 45558433 - 45558577
Alignment:
Q  46 gggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagta 144  Q
    |||||||| ||||| || | ||||||||||||||||| || || |||| | |  ||||||||| ||||||||||||||||||||||||| |||    |||    
T  45558433 gggtaatttagtaaattcatggtgaggattatttttattgttttagtgaggaccattattttactaagttactagtgtggtaattagttgtgagtcggta 45558532  T
Q  145 agtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||||    
T  45558533 agtgatcgttgttagtattttaccgttaagtgagtagaaacattt 45558577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 187
Target Start/End: Complemental strand, 23218629 - 23218486
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| |||||||  | |||||||||||||| ||||| ||  |||| |||   || ||||| ||||||||||||||||||||||||| ||| |  |    
T  23218629 agggtaatttagtaattc-atggtgaggattatttgtagtgtttcaagtgagaaccgttgttttactaagttactagtgtggtaattagttgtgagccgg 23218531  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacat 187  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||    
T  23218530 taagtgatcgttgttattattttaccgttaagtgagtagaaacat 23218486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 33172978 - 33172831
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaact 140  Q
    |||||||||| ||||| || | ||||||||||||||| ||||| ||  |||| |||  ||||||||| |||||||||||||||||| |||||| ||| |     
T  33172978 aagggtaatttagtaaattcatggtgaggattattttgtagtgtttcaagtgagaaccattattttactaagttactagtgtggtagttagttgtgagcc 33172879  T
Q  141 agtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
     |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  33172878 ggtaagtgatcgttgttattattttaccgtt-agtgagtagaaacattt 33172831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 17502944 - 17502760
Alignment:
Q  11 gtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattattttta----gtgctt--agtgtgaattattatt 104  Q
    ||||||||| | || ||| ||||||| || ||||||||||||| |||||||  | |||||||| ||||||||    ||| ||  ||||  ||  ||||||    
T  17502944 gtgttagaagggtaatttggtcatttagtgagtaagggtaatttagtaattccatggtgaggaatatttttacgtagtgtttcaagtgataaccattatt 17502845  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||||||||||||| ||||||||| |||||| || ||||||||| ||||||||||||||| |||||| ||||||| ||||    
T  17502844 ttactaagttactagtgtgataattagttgtgaactggtgagtgatcgttgttattattttaccgctaagtgagtagaaatattt 17502760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 22496707 - 22496854
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    ||||||| || ||||| || | |||||||||||||||||| | ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |      
T  22496707 aagggtactttagtaaattcatggtgaggattatttttagagtttcaagtgagaaccattattttaataagttactagtgtggtaattagttgtgagccg 22496806  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
      |||||||||| |||||||| ||||||||||||| ||||||||||||    
T  22496807 agaagtgatcgttgttattatgttaccgttaagtgagtagaaacattt 22496854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 27232566 - 27232734
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacg-gtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||| ||||||||||| | |||| ||||    ||||||||||||||||||| || |||| ||   ||||||||| ||||||||||||    
T  27232566 tattttggtcattttgtgagtaagggtaaattagtatttttttttgtgaggattatttttagtgtttcagtgagagccattattttactaagttactagt 27232665  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||| ||||| ||| || ||||||||   | |||| ||||||||||||||||| ||||||||||||    
T  27232666 gtggtaaatagttgtgagctggtaagtgacaattgttactattttaccgttaagtgtgtagaaacattt 27232734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 23151296 - 23151448
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| ||||||| || || |||||||| | |||||||||  ||| |||||||||||||||| |||||| |||  ||||||||| ||||||||| ||||    
T  23151296 tattttggtcatttagtgagcaagggtaaattagtaattttt-ggtaaggattatttttagtgtttagtgagaaccattattttactaagttactggtgt 23151394  T
Q  123 ggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
     ||||||||| ||  || | ||||||||||| |||| ||||| |||||||||||    
T  23151395 agtaattagtattttaccattaagtgatcgttgttagtatttcaccgttaagtg 23151448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 4234810 - 4234687
Alignment:
Q  68 tgaggattatttttagtgctta--gtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||||||||||||||| |||  ||| |||   |||||||| ||||||| ||||||||||||||||| ||| |  |||||||||||| |||| ||||||    
T  4234810 tgaggattatttttagtgtttaaagtgagaaccgttattttactaagttattagtgtggtaattagttgtgagccggtaagtgatcgttgttagtatttt 4234711  T
Q  166 accgttaagtgggtagaaacattt 189  Q
    ||||||||||| ||||||| ||||    
T  4234710 accgttaagtgagtagaaatattt 4234687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 29307215 - 29307064
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||  ||||||||||| | |||||||||   ||||||||||||||||||| || |||| |||  ||||||||| |||||||||||||    
T  29307215 tattttggtcattttgggagtaagggtaaattagtaatttt---gtgaggattatttttagtgttttagtgagaaccattattttactaagttactagtg 29307119  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    ||||||||||| ||  |||  ||||||| ||| |||  ||||| |||||||||||    
T  29307118 tggtaattagtattttactgttaagtgaccgttgttggtatttaaccgttaagtg 29307064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 33610502 - 33610654
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||  ||||||||||| | |||||||||  |||||| ||||||||||||| || |||| |||  ||||||||| || ||||||||||    
T  33610502 tattttggtcattttgcgagtaagggtaaattagtaatttt--ggtgagtattatttttagtgttttagtgagaaccattattttactatgttactagtg 33610599  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    | |||||||||| |||||   ||||| | ||| |||| |||||||||||||||||    
T  33610600 tagtaattagttgtgaaccgttaagtaaccgttgttagtattttaccgttaagtg 33610654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 45464589 - 45464770
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg-cttagtgtgaattattattt 105  Q
    ||||||||||||||| || ||| |||||||||| ||||||||||||| ||||| || ||  ||| ||||||||||||||  ||||   |||  |||||||    
T  45464589 tttcgtgttagaatggtagtttggtcattttgtgagtaagggtaatttagtaaattcac-atgatgattatttttagtgttttagcaagaaccattattt 45464687  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || ||||||||||||||||||||||||| |||     | ||||||||| |||| ||||||| ||||||||| ||| ||||||||    
T  45464688 tactaagttactagtgtggtaattagttgtgagtcgatgagtgatcgttgttagtatttta-cgttaagtgagtaaaaacattt 45464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 19330825 - 19330966
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgc-ttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    |||||||| | |||||||||  ||||||||  ||||||||||  |||||| |||  ||||||||| ||||||||||||||||||| ||||| ||| |  |    
T  19330825 aagggtaaattagtaattttt-ggtgaggaacatttttagtgtgttagtgagaaccattattttactaagttactagtgtggtaaatagttgtgagccgg 19330923  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaac 185  Q
    ||||||| ||| |||| ||||||||||||||||| ||||||||    
T  19330924 taagtgaccgttgttagtattttaccgttaagtgtgtagaaac 19330966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 23350949 - 23350794
Alignment:
Q  21 gatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactag 119  Q
    |||||||| ||||||||   ||||||||||| | |||||||||  |||||||||||||||||||| || |||| |||  ||||||||| |||||||||||    
T  23350949 gatattttggtcattttacgagtaagggtaaattagtaattttt-ggtgaggattatttttagtgttttagtgagaaccattattttactaagttactag 23350851  T
Q  120 tgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    | | ||||||||||  ||||   |||||||  || |||| |||||||||||||||||    
T  23350850 tatagtaattagttgagaaccgttaagtgactgttgttagtattttaccgttaagtg 23350794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 18260954 - 18261116
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattat-tttattaagttactagtgtggta 126  Q
    |||||||||||||||||||||||| |||||||| | ||||||  ||| |||||||| ||  |||| |||  ||||| |||| ||||| ||||||||||||    
T  18260954 gtcattttgtaagtaagggtaatttagtaatttcatggtgagagttaattttagtgtttcaagtgagaaccattatgtttactaagtcactagtgtggta 18261053  T
Q  127 attagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    | ||||| ||| |  |||||||| ||| |||| | |||||||||||| || ||||||| ||||    
T  18261054 aatagttgtgagccggtaagtgaccgttgttagtgttttaccgttaactgtgtagaaatattt 18261116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 24552065 - 24552211
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| ||||| || | | ||| |||||||||||||| ||  |||  |||  ||||||||| |||||||||| |||||||||||||| ||| |  |    
T  24552065 agggtaatttagtaaattcatgttgaagattatttttagtgtttcaagtaagaaccattattttactaagttactactgtggtaattagttatgagccgg 24552164  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||| |||||| ||||||||||||| || ||||| ||||||||||||    
T  24552165 taagagatcgttgttattattttactgtcaagtgagtagaaacattt 24552211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 176
Target Start/End: Complemental strand, 23158947 - 23158802
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaatt 129  Q
    |||||||||  ||||||||||| | |||||||||  | |||||||||||||||||| ||| || |||  ||||||||| ||||||| |||||||||||||    
T  23158947 gtcattttgcgagtaagggtaaattagtaatttttag-tgaggattatttttagtgtttaatgagaaccattattttactaagttattagtgtggtaatt 23158849  T
Q  130 agttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    |||  |||||   |||||||  || |||  |||||||||||||||||    
T  23158848 agtagtgaaccgttaagtgacagttgttggtattttaccgttaagtg 23158802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 23150568 - 23150470
Alignment:
Q  31 tcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaatta 130  Q
    ||||||||  ||||||||||| | |||||||||    |||||||||||||||||| |||||| |||  ||||||||| ||||||||||||||||||||||    
T  23150568 tcattttgcgagtaagggtaaattagtaatttttaa-tgaggattatttttagtgtttagtgagaaacattattttactaagttactagtgtggtaatta 23150470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 23242503 - 23242614
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||  ||||||||||||| | || ||| | | ||||||||||| ||||||||| ||| ||||  ||||||||| |||||||||||||    
T  23242503 tattttggtcattttgcgagtaagggtaatttaatattttcatgttgaggattattattagtgcttaagtatgaaacattattttactaagttactagtg 23242602  T
Q  122 tggtaattagtt 133  Q
    || |||||||||    
T  23242603 tgataattagtt 23242614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 24908548 - 24908416
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattat---ttttagtgctt--agtgtgaattattattttattaagttactagtgtgg 124  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||   ||||| || ||  |||| |||  ||||||||| |||||||||||  |||    
T  24908548 gtcattttgtaagtaagggtaatttagtaatttcatggtgaggattattttttttaatgtttcaagtgagaaccattattttactaagttactaggatgg 24908449  T
Q  125 taattagttttgaactagtaagtgatcgtcgtt 157  Q
    | |||| |||||| |  ||||||||||||||||    
T  24908448 tgattaattttgagccggtaagtgatcgtcgtt 24908416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 24910769 - 24910637
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattat---ttttagtgctt--agtgtgaattattattttattaagttactagtgtgg 124  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||   ||||| || ||  |||| |||  ||||||||| |||||||||||  |||    
T  24910769 gtcattttgtaagtaagggtaatttagtaatttcatggtgaggattattttttttaatgtttcaagtgagaaccattattttactaagttactaggatgg 24910670  T
Q  125 taattagttttgaactagtaagtgatcgtcgtt 157  Q
    | |||| |||||| |  ||||||||||||||||    
T  24910669 tgattaattttgagccggtaagtgatcgtcgtt 24910637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 21493925 - 21494044
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||| |||||||| ||||||| |  |||||||||||   |||||||||  |||||| ||||||||||||| |||||| |||  ||||||||| |||||    
T  21493925 ttagaaggatattttggtcatttagcgagtaagggtaaaatagtaatttt--ggtgagaattatttttagtgtttagtgagaaccattattttactaagt 21494022  T
Q  114 tactagtgtggtaattagtttt 135  Q
     ||||||||  |||||||||||    
T  21494023 cactagtgtactaattagtttt 21494044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 23837956 - 23837846
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| ||||||||||||| |||||| |||  ||||| ||| |||||||||||||| ||||||||| ||  ||   ||||||| ||| |||| ||||||    
T  23837956 ggtgagaattatttttagtgtttagtgagaaccattatcttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttaatatttt 23837857  T
Q  166 accgttaagtg 176  Q
    |||||||||||    
T  23837856 accgttaagtg 23837846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 20175237 - 20175372
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaatttt-acggtgaggattatttttagtgctt--agtgtgaattattat 103  Q
    |||||||||||||   |||||| |||||| ||| ||||||||||||| |||| |||| | ||||||  |||||||||||  ||  |||| |||  |||||    
T  20175237 tttcgtgttagaaaagtatttttgtcattctgtgagtaagggtaatttagtatttttcatggtgagagttatttttagtaattctagtgagaaccattat 20175336  T
Q  104 tttattaagttactagtgtggtaattagttttgaac 139  Q
    |||| |||||||||||||||||||||| ||| ||||    
T  20175337 tttactaagttactagtgtggtaattaatttcgaac 20175372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 20219964 - 20220099
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaatttt-acggtgaggattatttttagtgctt--agtgtgaattattat 103  Q
    |||||||||||||   |||||| |||||| ||| ||||||||||||| |||| |||| | ||||||  |||||||||||  ||  |||| |||  |||||    
T  20219964 tttcgtgttagaaaagtatttttgtcattctgtgagtaagggtaatttagtatttttcatggtgagagttatttttagtaattctagtgagaaccattat 20220063  T
Q  104 tttattaagttactagtgtggtaattagttttgaac 139  Q
    |||| |||||||||||||||||||||| ||| ||||    
T  20220064 tttactaagttactagtgtggtaattaatttcgaac 20220099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 22745425 - 22745339
Alignment:
Q  103 ttttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||| ||||||||||||||||||| ||||| ||| || |||||||| ||| |||| ||||||||| |||| || || |||||||||    
T  22745425 ttttactaagttactagtgtggtaaatagttgtgagctggtaagtgaccgttgttagtattttaccattaaatgtgtggaaacattt 22745339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 37651947 - 37652069
Alignment:
Q  67 gtgaggattatttttagt-gcttagtgtgaattatta-ttttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    ||||||||||||||||||   |||||| |||  |||| ||||| |||||||||||| || ||| ||||| |||||  |||||||| ||| |||| |||||    
T  37651947 gtgaggattatttttagtattttagtgagaaccattatttttactaagttactagtatgttaaatagttgtgaaccggtaagtgaccgttgttagtattt 37652046  T
Q  165 taccgttaagtgggtagaaacattt 189  Q
    |||||||||||  ||||||||||||    
T  37652047 taccgttaagt--gtagaaacattt 37652069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 20086291 - 20086231
Alignment:
Q  253 acatcaaaagtttcctaacggcacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    |||||||||||||||| ||| ||||  |||||||||||||||||  |||||||||||||||    
T  20086291 acatcaaaagtttcctgacgacacaaataaaatacttaaatgcctccagcggtagttaact 20086231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 175
Target Start/End: Original strand, 23225636 - 23225769
Alignment:
Q  41 agtaagggtaattaagtaattttacggtgaggattatttttagtg-cttagtgtgaattattattttattaagttactagtgtggtaattagttttgaac 139  Q
    ||||||||||| | ||||||||||  ||||| |||||||||||||  |||||| |||  ||||||| | ||||||||| || | |||||||||| |||||    
T  23225636 agtaagggtaaattagtaatttta--gtgagaattatttttagtgttttagtgagaaccattatttcactaagttacttgtatagtaattagttgtgaac 23225733  T
Q  140 tagtaagtgatcgtcgttattattttaccgttaagt 175  Q
     | | ||||| ||| |||| |||||||| |||||||    
T  23225734 catttagtgaccgttgttagtattttacagttaagt 23225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 24240315 - 24240183
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaaca-tttcgtgaacg 197  Q
    ||||||||| |||||||||| || ||||||||| | |||    |||||||| |||  |||||||||||| |||||||| ||||||||| ||| ||||| |    
T  24240315 attattttactaagttactattgcggtaattagatgtgagtcggtaagtgaccgttattattattttactgttaagtgagtagaaacatttttgtgaatg 24240216  T
Q  198 gattagtaaatgggttta-cccattaaggcatt 229  Q
      |||||||||||||| | ||||||||| ||||    
T  24240215 atttagtaaatgggttaagcccattaagacatt 24240183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 5855340 - 5855217
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| |||||| |||||| |||||| |||  ||||||||| |||||||| |||||| | |||||| ||  ||   ||||| | ||| |||| ||||||    
T  5855340 ggtgagaattattcttagtgtttagtgagaaccattattttactaagttaccagtgtgcttattagtattttaccgttaagtaaccgttgttagtatttt 5855241  T
Q  166 accgttaagtgggtagaaacattt 189  Q
    ||||||||| | ||||||||||||    
T  5855240 accgttaagagtgtagaaacattt 5855217  T

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Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 33529204 - 33529094
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg-cttagtgtgaattattattttattaagttactagtg 121  Q
    |||||| ||||||||| | ||||| |||| | |||||||||  ||||||||||||||||||||  |||||| |||  ||||||||  ||||||||| |||    
T  33529204 tattttggtcattttgaatgtaagagtaaattagtaattttt-ggtgaggattatttttagtgttttagtgagaaccattattttgctaagttactggtg 33529106  T
Q  122 tggtaattagtt 133  Q
    | ||||||||||    
T  33529105 tagtaattagtt 33529094  T

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Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 16002695 - 16002606
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatt 188  Q
    ||||||||| |||||| |||| |||||||||||||  ||    |||||  |||||  ||||||||||||||||||||| |||||||||||    
T  16002695 attattttactaagtttctagcgtggtaattagttgcgagtcggtaagctatcgttattattattttaccgttaagtgagtagaaacatt 16002606  T

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Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 17285962 - 17285852
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| ||||||||||| | |||||| |||  ||||||||| ||||||||||| ||  |||||||| ||  || | ||||||| ||| | || ||||||    
T  17285962 ggtgagaattatttttagcgtttagtgagaaccattattttactaagttactagggtaataattagtattttaccattaagtgaccgttgctagtatttt 17285863  T
Q  166 accgttaagtg 176  Q
    |||||| ||||    
T  17285862 accgttgagtg 17285852  T

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Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 18829172 - 18829118
Alignment:
Q  31 tcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    ||||| |||| | |||||||| | |||||||| ||||||||||||||||||||||    
T  18829172 tcattctgtaggcaagggtaaattagtaatttcacggtgaggattatttttagtg 18829118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 18613123 - 18613054
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| |||   |||||||| |||||||||||||| || |||||||||    
T  18613123 ggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttt 18613054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 50313988 - 50313821
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||||||||||||||||| |||||||| | |||||||||| ||||||||| ||  |||| |||  ||||||||| ||||||||||||    
T  50313988 tattttggtcattttgtaagtaagggtaatttagtaatttcatggtgaggatt-tttttagtgtttcaagtgagaaccattattttactaagttactagt 50313890  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||||| ||||| ||||||||||||| |||| |||| |||||||||||| ||||||||||||    
T  50313889 gtggtaattagttgtgaaccagtaagtgatcgttgttagtattataccgttaagtgagtagaaacattt 50313821  T

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Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 11639088 - 11638904
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | || ||| |||||||||| ||||||||||||| | |||||| | |||||||||||||||||||| ||  |||| |||  ||||||    
T  11639088 tttcgtgttagaagggtaatttggtcattttgtgagtaagggtaatttaataatttcatggtgaggattatttttagtgtttcaagtgagaaccattatt 11638989  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||||||||||||| ||||||||| ||| |  |||||||||||| ||  |||||||||||||||||| ||||||||||||    
T  11638988 ttactaagttactagtgtgataattagttgtgagccggtaagtgatcgttgtatttattttaccgttaagtgagtagaaacattt 11638904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 31411134 - 31411280
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| ||||| |||| | |||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |  |    
T  31411134 agggtaatttagtaaatttatgatgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccgg 31411233  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  31411234 taagtgatcgttgttattattttaccgttaagtgagtagaaacattt 31411280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 41662353 - 41662171
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattt 105  Q
    ||||||||||||| | || ||| |||||||||| |||||| |||||| ||| |||| | | |||||||||||||||||| || |||| |||| |||||||    
T  41662353 tttcgtgttagaagggtaatttggtcattttgtgagtaagagtaatttagtgatttcatg-tgaggattatttttagtgttttagtgagaatcattattt 41662255  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || ||||||||||||||| ||||||||| |||    |||||||||||| ||  |||||||| ||||||||| ||||||||||||    
T  41662254 tactaagttactagtgtgataattagttgtgagtcggtaagtgatcgttgtatttattttatcgttaagtgagtagaaacattt 41662171  T

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Target: chr3; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 40038410 - 40038571
Alignment:
Q  31 tcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggtaa 127  Q
    ||||||||| ||| ||||||| | |||||||||| ||||||  ||||||| ||||| ||  |||| |||  ||||||||| |||||||||||||||||||    
T  40038410 tcattttgtgagttagggtaaattagtaattttatggtgagagttattttgtagtgtttcaagtgagaaccattattttactaagttactagtgtggtaa 40038509  T
Q  128 ttagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||| |  |||||||||||| ||||| |||||||||||||||| | ||||||||||    
T  40038510 ttagttttgagccggtaagtgatcgttgttataattttaccgttaagtgcggagaaacattt 40038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 4161700 - 4161871
Alignment:
Q  16 agaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattattttt-agtgcttagtgtgaattattattttattaagtt 114  Q
    |||||| |||||| |||||||||| ||||||||||| | ||||||||   |||| ||||||||||| |||  |||||| |||  ||||||||| ||||||    
T  4161700 agaatggtattttggtcattttgtgagtaagggtaaattagtaattt---ggtggggattattttttagtatttagtgagaaccattattttactaagtt 4161796  T
Q  115 actagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||| |||||||| | ||| |||||| |||||||  ||| |||| ||||||||||||||||| ||||||||||||    
T  4161797 actaatgtggtaagtggttgtgaactggtaagtggccgttgttagtattttaccgttaagtgtgtagaaacattt 4161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 43427007 - 43427154
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||| ||||| ||||| || | ||||||| |||||||||||| ||  |||| |||  ||||||||| |||||||||||||||||||||| || ||| |      
T  43427007 aaggataatttagtaaattcatggtgaggtttatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattaattgtgagccg 43427106  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  43427107 gtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 43427154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 8605593 - 8605428
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||| ||||||||||| | |||||||||  || |||||||||||| |||| || |||| |||  ||||||||| |||||||||||||    
T  8605593 tattttggtcattttgtgagtaagggtaaattagtaattttt-ggagaggattatttt-agtgttttagtgggaaccattattttactaagttactagtg 8605496  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    | |||||||||| ||| |  |||||||| | | |||||||||||||||||||||| ||||||||||||    
T  8605495 tagtaattagttgtgagccggtaagtgacccttgttattattttaccgttaagtgagtagaaacattt 8605428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 38375175 - 38375337
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggta 126  Q
    |||||||||| | ||||||||| | |||||||| | |||||||  |||||| ||||| ||  |||| |||  ||||||||| ||||||||||||||||||    
T  38375175 gtcattttgtgaataagggtaaattagtaatttcatggtgagggctattttgtagtgattcaagtgagaaccattattttactaagttactagtgtggta 38375274  T
Q  127 attagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||| ||| |  |||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  38375275 attagttgtgagccggtaagtgatcgttgttagtattttaccgttaagtgagtagaaacattt 38375337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 4145542 - 4145706
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattattttt-agtgcttagtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||| ||||||||||| | ||||||||   |||| ||||||||||| |||  |||||| |||  ||||||||| |||||||||||||    
T  4145542 tattttggtcattttgtgagtaagggtaaattagtaattt---ggtggggattatttttcagtatttagtgagaaccattattttactaagttactagtg 4145638  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| | ||| ||| |  |||||||| ||| |||| ||||||| ||||||||| ||||||||||||    
T  4145639 tggtaaatggttgtgagccggtaagtgaccgttgttagtattttatcgttaagtgtgtagaaacattt 4145706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 9590208 - 9590362
Alignment:
Q  21 gatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagt 120  Q
    |||||||| ||||||||| |||||||||||| | |||||||||  ||||||||||| |||||||| |||||| |||  ||||||||| |||||||||||     
T  9590208 gatattttggtcattttgcaagtaagggtaaattagtaattttt-ggtgaggattagttttagtgtttagtgagaaccattattttactaagttactagc 9590306  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    || |||||||||| | ||||  ||| ||||||| |||| ||  |||| ||||||||    
T  9590307 gtagtaattagttgtaaactgttaactgatcgttgttagtacgttacagttaagtg 9590362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 10913653 - 10913491
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggta 126  Q
    |||||||||| | ||||||||| | | |||||| | |||||||  |||||| ||||| ||  |||| |||  ||||||||| ||||||||||||||||||    
T  10913653 gtcattttgtgaataagggtaaattaataatttcatggtgagggctattttgtagtgtttctagtgagaaccattattttactaagttactagtgtggta 10913554  T
Q  127 attagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||| ||| |  |||||||||||| |||| ||||||||||||| ||| ||||||||||||    
T  10913553 attagttgtgagccggtaagtgatcgttgttagtattttaccgttacgtgagtagaaacattt 10913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 18970689 - 18970528
Alignment:
Q  26 tttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgct-tagtgtgaattattattttattaagttactagtgtgg 124  Q
    |||||||||||||||||||||||||| | |||||||||  | ||| |||||||||||||| | ||||| |||  ||||||||| ||||||| ||||||||    
T  18970689 tttagtcattttgtaagtaagggtaaattagtaatttttag-tgatgattatttttagtgttatagtgagaaccattattttactaagttattagtgtgg 18970591  T
Q  125 taattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||| ||| |   ||||| | ||| |||| ||||||||||||||||  ||||||||||||    
T  18970590 taaatagttgtgagccgttaagtcaccgttgttagtattttaccgttaagt--gtagaaacattt 18970528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 12530943 - 12531119
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctta-gtgtgaattattattttattaag 112  Q
    |||||| | ||||||  |||||||||||| |||||| ||| |||||||| | ||||||||||||||| |||  | | ||| |||  ||||||||| ||||    
T  12530943 ttagaagggtattttgatcattttgtaagcaagggtgatttagtaatttcatggtgaggattattttcagttttcaagtgagaaccattattttactaag 12531042  T
Q  113 ttactagtgtggtaattagttttgaactagtaagtgatcgtcgttatta-ttttaccgttaagtgggtagaaacatt 188  Q
    |||||| |||||||||| ||| ||| |  ||||||||||||  |||||| |||||| |||||||| |||||||||||    
T  12531043 ttactattgtggtaatttgttgtgagccggtaagtgatcgttattattatttttactgttaagtgagtagaaacatt 12531119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 25103464 - 25103631
Alignment:
Q  25 ttttagtcattttgtaagtaagggtaattaagtaattttac-ggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtg 121  Q
    |||| |||||||||| ||||||||||||| |||||||||   ||||||| ||| ||||||||  |  |||| |||  ||||| ||| |||||||||||||    
T  25103464 ttttggtcattttgtgagtaagggtaatttagtaattttcttggtgagggttacttttagtgtctcaagtgagaaccattatcttactaagttactagtg 25103563  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    | |||| ||||  ||| |  |||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  25103564 tagtaactagtcgtgagccggtaaatgatcgtcgttattattttaccattaagtgagtagaaacattt 25103631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 33368458 - 33368573
Alignment:
Q  75 tatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaa 173  Q
    ||||||||||| || |||| |||  ||||||||||||||||||||||||  ||| ||||| |||||  |||||||||||| |||| ||||||||||||||    
T  33368458 tatttttagtgttttagtgagaaccattattttattaagttactagtgtaataaatagttgtgaaccggtaagtgatcgttgttagtattttaccgttaa 33368557  T
Q  174 gtgggtagaaacattt 189  Q
    ||| ||| ||||||||    
T  33368558 gtgtgtataaacattt 33368573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 6224638 - 6224728
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||||||||||||||| ||||| ||| |  |||||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  6224638 attattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtattttaccgttaagtgtgtagaaacattt 6224728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 37914774 - 37914934
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggta 126  Q
    |||||||||| |||||||||| || |||||||| | | ||||  ||||||| ||||| ||  |||| |||  ||||||||| ||| ||||||||||||||    
T  37914774 gtcattttgtgagtaagggtattttagtaatttcatgatgag--ttattttgtagtgtttcaagtgagaaccattattttactaatttactagtgtggta 37914871  T
Q  127 attagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    | || |||||| |  |||||||||||| ||||||||||||||||||| || ||| ||||||||    
T  37914872 actaattttgagccggtaagtgatcgttgttattattttaccgttaaatgagtataaacattt 37914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 21166535 - 21166701
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattt 105  Q
    ||||||||||||| | || |||  |||| |||| |||||| |||||| ||||| || | | |||||||||||||||||| || |||| |||  |||||||    
T  21166535 tttcgtgttagaaaggtaatttgttcatgttgtgagtaagagtaatttagtaaattcatg-tgaggattatttttagtgttttagtgagaaccattattt 21166633  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaa 173  Q
    || ||||||||||||||| |||||||||  ||    |||||||||||| |||| ||||||||||||||    
T  21166634 tactaagttactagtgtgataattagttgcgagtcggtaagtgatcgttgttagtattttaccgttaa 21166701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 3575953 - 3576076
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| ||||||||||||| |||||| |||  ||||||||| |||||||||||||| ||||||||| ||  ||   ||||||| ||| |||| ||||||    
T  3575953 ggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagtgttgtaattagtattttacggttaagtgaccgttgttagtatttt 3576052  T
Q  166 accgttaagtgggtagaaacattt 189  Q
    ||||||  | | ||||||||||||    
T  3576053 accgttgtgagtgtagaaacattt 3576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 11403374 - 11403311
Alignment:
Q  26 tttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctta 89  Q
    |||||||||||||| ||||||||||||| |||| ||| | ||||||||||||||||||||||||    
T  11403374 tttagtcattttgtgagtaagggtaatttagtattttcatggtgaggattatttttagtgctta 11403311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 14285725 - 14285633
Alignment:
Q  41 agtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||||||||   |||||||||  |||||| ||||||||||||| |||||| |||  ||||||||| |||||||| ||||| ||||||||||||    
T  14285725 agtaagggtaaaatagtaatttt--ggtgagaattatttttagtgtttagtgagaaccattattttactaagttaccagtgtagtaattagtttt 14285633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 177
Target Start/End: Original strand, 13311597 - 13311730
Alignment:
Q  43 taagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| | |||||||||  |||||||||||||||||||| |||||| |||  ||||||||| |||||||  ||||| |||||||||  |||||       
T  13311597 taagggtaaattagtaattttt-ggtgaggattatttttagtgtttagtgagaaccattattttactaagttatgagtgtagtaattagtggtgaaccgt 13311695  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgg 177  Q
    | ||||| ||| |||| ||||||| |||| |||||    
T  13311696 ttagtgaccgttgttagtattttatcgttgagtgg 13311730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 17205429 - 17205319
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| ||||||||||||| |||||| |||  ||||||||| ||||||||||| || ||||||| | ||  || | ||||||||| | |||  ||||||    
T  17205429 ggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagggtagtaattaatattttaccattaagtgatcattgttggtatttt 17205330  T
Q  166 accgttaagtg 176  Q
    |||||||||||    
T  17205329 accgttaagtg 17205319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 173
Target Start/End: Original strand, 17586413 - 17586556
Alignment:
Q  31 tcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatttt-attaagttactagtgtggtaa 127  Q
    ||||||||| ||||||||||| | |||| ||||  ||||||||||||||| |||| ||  |||  |||| |||||||| | |||||||||||||||||||    
T  17586413 tcattttgtgagtaagggtaaattagtatttttt-ggtgaggattatttt-agtgtttcaagtaagaatcattatttttactaagttactagtgtggtaa 17586510  T
Q  128 ttagttttgaactagtaagtgatcgtcgttattattttaccgttaa 173  Q
     ||||| ||| |  |||||||| ||| |||| ||||||||||||||    
T  17586511 atagttgtgagccggtaagtgaccgttgttactattttaccgttaa 17586556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 13300941 - 13301029
Alignment:
Q  43 taagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    ||||||||| | |||||||||  |||||||||||||||||||| |||||| |||  ||||||||| |||||||  ||||| |||||||||    
T  13300941 taagggtaaattagtaattttt-ggtgaggattatttttagtgtttagtgagaaccattattttactaagttatgagtgtagtaattagt 13301029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 11514977 - 11515045
Alignment:
Q  21 gatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctta 89  Q
    |||||||| ||||||||| |||||||| ||||| |||||||| |||  |||||||| ||||||||||||    
T  11514977 gatattttggtcattttgcaagtaaggataatttagtaatttcacgacgaggattaattttagtgctta 11515045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 34560585 - 34560461
Alignment:
Q  66 ggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    |||||| ||||||||||||| || |||| |||  |||||||||||||||||||||||| ||  ||||| ||  ||   ||||||| | | |||| |||||    
T  34560585 ggtgagaattatttttagtgttttagtgagaaccattattttattaagttactagtgtagttgttagtattttaccgttaagtgaccattgttagtattt 34560486  T
Q  165 taccgttaagtgggtagaaacattt 189  Q
    |||||||||| | ||||||||||||    
T  34560485 taccgttaagagtgtagaaacattt 34560461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 176
Target Start/End: Complemental strand, 19306563 - 19306426
Alignment:
Q  41 agtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtga--attattattttattaagttactagtgtggtaattagttttga 137  Q
    |||| |||||||  |||||||||  |||||||||||||||||||| || |||||||  |  ||||||||| |||||||||||||| ||||||||| ||      
T  19306563 agtaggggtaatgtagtaattttt-ggtgaggattatttttagtgttttagtgtgagaaccattattttactaagttactagtgtagtaattagtatttt 19306465  T
Q  138 actagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    ||   ||||||| |||  ||| |||||||||||||||||    
T  19306464 accgttaagtgaccgttattagtattttaccgttaagtg 19306426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 11881712 - 11881821
Alignment:
Q  68 tgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttac 167  Q
    |||| ||||||||||||| |||| | | |  ||||||||  |||||||||||||| ||||||||| ||  ||   ||||||| ||| |||| ||||||||    
T  11881712 tgagaattatttttagtgtttagcgaggaccattattttgctaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttagtattttac 11881811  T
Q  168 cgttaagtgg 177  Q
    ||||||||||    
T  11881812 cgttaagtgg 11881821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 12032261 - 12032202
Alignment:
Q  73 attatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    ||||||||||||| |||||| |||  ||||||||| ||||||||||| || |||||||||    
T  12032261 attatttttagtgtttagtgagaaccattattttactaagttactagagtagtaattagt 12032202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 38168707 - 38168604
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||| | |||||| ||||||| |  |||||||||||   |||||||||  |||| | ||||||||||||| |||||| |||  ||||||||| |||||    
T  38168707 ttagaagggtattttggtcatttagcgagtaagggtaaaatagtaatttt--ggtgtgaattatttttagtgtttagtgagaaccattattttactaagt 38168610  T
Q  114 tactag 119  Q
    ||||||    
T  38168609 tactag 38168604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 313
Target Start/End: Original strand, 44006437 - 44006471
Alignment:
Q  279 gtaaaatacttaaatgccctcagcggtagttaact 313  Q
    ||||||||||||||||||| |||||||||||||||    
T  44006437 gtaaaatacttaaatgcccccagcggtagttaact 44006471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 11476717 - 11476786
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| |||  ||||||||| |||||||||||||| || |||| ||||    
T  11476717 ggtgagaattatttttaatgtttagtgagaaccattattttactaagttactagtgtagtgattaatttt 11476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 4950896 - 4950856
Alignment:
Q  274 cacatgtaaaatacttaaatgccctcagcggtagttaactg 314  Q
    |||| ||||||||||||||||||||||  ||||||||||||    
T  4950896 cacaagtaaaatacttaaatgccctcaatggtagttaactg 4950856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 11060500 - 11060564
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaatta 130  Q
    |||||| ||||||||||||| |||||| |||   |||||||| ||||||||||| || |||||||    
T  11060500 ggtgagaattatttttagtgtttagtgagaaccgttattttactaagttactagagtagtaatta 11060564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 18506833 - 18507002
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaa-ttaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactag 119  Q
    |||||| |||||||||||||||||||||| || ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| |||||||||||    
T  18506833 tattttggtcattttgtaagtaagggtaaatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactag 18506932  T
Q  120 tgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||||| ||| | ||||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  18506933 tgtggtaattagttgtgagccagtaagtgatcgttgttattattttaccgttaagtgagtataaacattt 18507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 22582245 - 22582413
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| || |||||||||||||| || ||| |||||||| | | |||||||||||||||||| ||  |||| ||| |||||||||| ||||||||||||    
T  22582245 tattttggtaattttgtaagtaagagtgatttagtaatttcatgatgaggattatttttagtgtttcaagtgagaactattattttactaagttactagt 22582344  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || |||||||||| ||| |  |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  22582345 gtagtaattagttgtgagccggtaagtgatcgttgttattattttaccgttaagtgagtaaaaacattt 22582413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 22585035 - 22585203
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| || |||||||||||||| || ||| |||||||| | | |||||||||||||||||| ||  |||| ||| |||||||||| ||||||||||||    
T  22585035 tattttggtaattttgtaagtaagagtgatttagtaatttcatgatgaggattatttttagtgtttcaagtgagaactattattttactaagttactagt 22585134  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || |||||||||| ||| |  |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  22585135 gtagtaattagttgtgagccggtaagtgatcgttgttattattttaccgttaagtgagtaaaaacattt 22585203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 22589866 - 22590034
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| || |||||||||||||| || ||| |||||||| | | |||||||||||||||||| ||  |||| ||| |||||||||| ||||||||||||    
T  22589866 tattttggtaattttgtaagtaagagtgatttagtaatttcatgatgaggattatttttagtgtttcaagtgagaactattattttactaagttactagt 22589965  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || |||||||||| ||| |  |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  22589966 gtagtaattagttgtgagccggtaagtgatcgttgttattattttaccgttaagtgagtaaaaacattt 22590034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 189
Target Start/End: Original strand, 15004390 - 15004559
Alignment:
Q  24 attttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattattttt--agtgctt--agtgtgaattattattttattaagttactag 119  Q
    ||||| |||||||||||||||||||||||| |||||||| | ||||||||||||||||  |||| ||  |||| |||  ||||||||| |||||||||||    
T  15004390 attttggtcattttgtaagtaagggtaatttagtaatttcatggtgaggattatttttttagtgtttcaagtgagaaccattattttactaagttactag 15004489  T
Q  120 tgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||  |||||||| ||| |  |||||||||||| |||||||||| ||||||| ||| ||||||||||||    
T  15004490 tgtgccaattagttgtgagccggtaagtgatcgttgttattatttaaccgttatgtgagtagaaacattt 15004559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 21931975 - 21931763
Alignment:
Q  31 tcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaat 128  Q
    |||||||| |||||||||||||| |||| ||| | |||||||||||||||||||| ||  |||| |||  ||||||||| |||||||||||||| |||||    
T  21931975 tcattttgcaagtaagggtaatttagtattttcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtagtaat 21931876  T
Q  129 tagttttgaactagtaagtgatcg---tcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-cccattaag 224  Q
    ||||| ||| |  |||||||||||   |  ||||||||||||||| ||||| ||| |||||||| |  || || |||||||||||||| | |||||||||    
T  21931875 tagttgtgagccggtaagtgatcgttattattattattttaccgtgaagtgagtaaaaacattttgcaaatggtttagtaaatgggttaagcccattaag 21931776  T
Q  225 gcattaatggtta 237  Q
    ||||||| |||||    
T  21931775 gcattaagggtta 21931763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 15889210 - 15889355
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| |||||||  | |||||||||||||||||||| ||  |||| |||| ||||||||| | ||||||||||||||||||||||| ||| |  |    
T  15889210 agggtaatttagtaattc-atggtgaggattatttttagtgttttaagtgagaatcattattttacttagttactagtgtggtaattagttgtgagccgg 15889308  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||| |||| |||||||||||||||||  |||||||||||    
T  15889309 taagtgatcgttgttactattttaccgttaagtgattagaaacattt 15889355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 31467052 - 31467217
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| |||||||||| ||||||||||| |  ||||||||  | || ||||||||||||||  |||||| |||  ||||||||| ||||||||||||||    
T  31467052 tattttcgtcattttgtgagtaagggtaaattggtaattttt-gatggggattatttttagtatttagtgagaaccattattttactaagttactagtgt 31467150  T
Q  123 ggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||| ||||| |||    |||||||||||| |||| ||||||||||||||||| ||||||| ||||    
T  31467151 ggtaaatagttatgagtcggtaagtgatcgttgttagtattttaccgttaagtgtgtagaaatattt 31467217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 19854902 - 19854720
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctta-gtgtgaattattattt 105  Q
    ||||||||||||| | || ||| |||||||||| || |||||||||| ||||| || | |  | ||||||||||||||| ||  ||| |||  |||||||    
T  19854902 tttcgtgttagaagggtaatttggtcattttgtgagaaagggtaatttagtaaattcatgc-gtggattatttttagtgtttttgtgagaaccattattt 19854804  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || ||||||||||||||||||||||||| ||| |  |||||||||||| ||  |||||||||||||||||| ||| ||||||||    
T  19854803 tactaagttactagtgtggtaattagttatgagccggtaagtgatcgttgtatttattttaccgttaagtgagtataaacattt 19854720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 19176046 - 19175936
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt 106  Q
    ||||||||||||| | |||||| ||||||| || || |||||| | | |||||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  19176046 tttcgtgttagaagggtattttggtcatttggttagcaagggtgaattagtaattttatgatgagaattatttttagtgcttagtgtgaattattatttt 19175947  T
Q  107 attaagttact 117  Q
    | |||||||||    
T  19175946 actaagttact 19175936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 34967623 - 34967477
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| ||||| || | ||||| |||||||||||||  ||  |||| |||  ||||||||| |||||||||||||| ||  |||||| |||||  |    
T  34967623 agggtaatttagtaaattcatggtgaagattatttttagtatttcaagtgagaaccattattttactaagttactagtgtagtggttagttgtgaaccgg 34967524  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  34967523 taagtgatcgttgttattattttactgttaagtgagtagaaacattt 34967477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 116604 - 116694
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| |||||||||||| |||||||||||| ||| |  ||||||||| || |||||||||||||||||||||| ||||||||||||    
T  116604 attattttactaagttactagtatggtaattagttgtgagccggtaagtgattgttgttattattttaccgttaagtgagtagaaacattt 116694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 23223521 - 23223359
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattattttt-agtgctt--agtgtgaattattattttattaagttactagtgtggta 126  Q
    |||||||||  ||||||||||| | |||| ||| | ||||||| |||||||| |||| ||  |||| |||  ||||||||| ||||||||||||||||||    
T  23223521 gtcattttgggagtaagggtaaattagtattttcatggtgagggttattttttagtgtttcaagtgagaaccattattttactaagttactagtgtggta 23223422  T
Q  127 attagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||  || ||| ||  ||| ||||||| ||||||||||||||||||| || ||||||||||||    
T  23223421 atttattatgagctgataattgatcgttgttattattttaccgttaaatgagtagaaacattt 23223359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 29157961 - 29158087
Alignment:
Q  66 ggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattat 162  Q
    ||||||||||||||| ||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||  ||| |  |||||||||||| |||| |||    
T  29157961 ggtgaggattattttgtagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagtggtgagccggtaagtgatcgttgttactat 29158060  T
Q  163 tttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||||| ||||||| ||||    
T  29158061 tttaccgttaagtgagtagaaatattt 29158087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 32352787 - 32352613
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt 106  Q
    ||||||||||||| | || ||| |||||||||  ||||||||||||| ||||| || | | |||||||||||||||||   |||    ||  ||||||||    
T  32352787 tttcgtgttagaagggtaatttggtcattttgagagtaagggtaatttagtaaattcatg-tgaggattatttttagt---tag----aaccattatttt 32352696  T
Q  107 attaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    | ||||||| |||||||||||||| || |||    |||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  32352695 actaagttattagtgtggtaattaattgtgagtcggtaagtgatcgttgttagtattttaccgttaagtgagtagaaacattt 32352613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 19171339 - 19171238
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| ||||||||| |||||||||||||| |||||||| | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||    
T  19171339 tattttggtcattttgcaagtaagggtaatttagtaatttcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagt 19171240  T
Q  121 gt 122  Q
    ||    
T  19171239 gt 19171238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 29606159 - 29605994
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| |||||||| | |||||| |||| | |||||| ||  ||||||||  |||||||||  |||||| |||  |||||||||  |||||||||||||    
T  29606159 tattttggtcattttatgagtaagagtaaattagtaatgttt-ggtgaggaacatttttagtatttagtgagaaccattattttaccaagttactagtgt 29606061  T
Q  123 ggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||| ||||| ||| |  |||||||| | | |||| ||||||||||||||||| ||||||||||||    
T  29606060 ggtaaatagttgtgagccggtaagtgaccattgttagtattttaccgttaagtgtgtagaaacattt 29605994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 18733711 - 18733521
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    |||| |||||||| |||||||| |||||||||| || |||||||| | |||||||| | ||||||  |||||||||||| ||  |||| |||   |||||    
T  18733711 tttcatgttagaaggatattttggtcattttgtgagcaagggtaaattagtaatttcatggtgagagttatttttagtgtttcaagtgagaaccgttatt 18733612  T
Q  105 ttattaagttactagtgtg-----gtaattagttttg-aactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||||| ||||| |     ||||||  ||||  |||  ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  18733611 ttactaagttattagtgggttgtagtaatttattttataaccggtaagtgatcgttattattattttaccgttaagtgggtagaaacattt 18733521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 18629059 - 18629210
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg-cttagtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||  ||||||||||| | |||||||||  ||||||||||||||||||||  |||||| |||  ||  ||||| |||||||||||||    
T  18629059 tattttggtcattttgcgagtaagggtaaattagtaatttt-tggtgaggattatttttagtgttttagtgagaaccat--ttttactaagttactagtg 18629155  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    | |||||||||| || ||   ||| ||| ||| |||| |||||||||||||||||    
T  18629156 tagtaattagttgtgtaccgttaaatgaccgttgttagtattttaccgttaagtg 18629210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 18381312 - 18381413
Alignment:
Q  74 ttatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaa 173  Q
    |||||||||||| |||||| |||  ||||||||| |||||||||||||| ||||||||| ||  ||   ||||||||||| | || ||||||||||||||    
T  18381312 ttatttttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtattttaccgataagtgatcgttgctagtattttaccgttaa 18381411  T
Q  174 gt 175  Q
    ||    
T  18381412 gt 18381413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 22461590 - 22461737
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||  || ||||   ||| |      
T  22461590 aagggtaatttagtaaattcatggtgaggattatttttagtgtttcgagtgagaaccattattttactaagttactagtgtaatatttagaaatgagccg 22461689  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
     ||||||||| | |||||||||||||  ||||||| ||||||||||||    
T  22461690 ttaagtgatcattgttattattttactattaagtgagtagaaacattt 22461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 17082651 - 17082797
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| |||||||||  ||||||||||| |  ||||||||  ||||||||||||||| |||| |||||| |||  ||||||||| |||||||  |||||    
T  17082651 tattttggtcattttgcgagtaagggtaaattggtaattttt-ggtgaggattattttaagtgtttagtgagaaccattattttactaagttatgagtgt 17082749  T
Q  123 ggtaattagttttgaactagtaagtgatcgtcgttattattttaccgt 170  Q
     |||||||||  |||||   | ||||| ||| |||| |||||||||||    
T  17082750 agtaattagtggtgaaccgtttagtgaccgttgttagtattttaccgt 17082797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 17013264 - 17013354
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||||| ||||||||||||||  ||| |  |||||||| ||| ||||||||||||   ||||||| ||||||||||||    
T  17013264 attattttactaagttacttgtgtggtaattagtcgtgagccggtaagtgaccgttgttattattttattattaagtgagtagaaacattt 17013354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 22848791 - 22848674
Alignment:
Q  73 attatttttagtg-cttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgtt 171  Q
    ||||||||| ||| ||||||| |||  ||||||||| |||||||||| |||||||| ||||| ||| |  |||||| | | | |||| ||||||||||||    
T  22848791 attatttttggtgtcttagtgagaaccattattttactaagttactattgtggtaaatagttgtgagccggtaagtaaccatagttagtattttaccgtt 22848692  T
Q  172 aagtgggtagaaacattt 189  Q
    ||||| ||||||| ||||    
T  22848691 aagtgtgtagaaagattt 22848674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 33537839 - 33537949
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||   ||||| |||| | |||||||||  |||||||||||||||||||| || |||| |||  ||||||||  |||||||||||||    
T  33537839 tattttggtcattttgggtgtaagagtaaattagtaattttt-ggtgaggattatttttagtgttttagtgagaaccattattttgctaagttactagtg 33537937  T
Q  122 tggtaattagtt 133  Q
    | ||||||||||    
T  33537938 tagtaattagtt 33537949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 33820112 - 33820173
Alignment:
Q  252 aacatcaaaagtttcctaacggcacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    ||||||||||  |||||||  |||||||||||||||||||||   |||||||||||||||||    
T  33820112 aacatcaaaaacttcctaaaagcacatgtaaaatacttaaatttactcagcggtagttaact 33820173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 21623927 - 21623819
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| ||||||||||| | |||||| |||| ||||||||| || |||||||| || ||||||||| ||  ||   ||||||| ||| |||| ||||||    
T  21623927 ggtgagaattatttttagcgtttagtgagaatcattattttactacgttactagggtagtaattagtattttaccgttaagtgaccgttgttagtatttt 21623828  T
Q  166 accgttaag 174  Q
    |||| ||||    
T  21623827 accgctaag 21623819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 25920395 - 25920274
Alignment:
Q  9 tcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttat 108  Q
    ||||||||||| | |||||| ||||||| || | ||||||||| | |||||||||  | |||||||||||||||||  |||||  |||  ||||||||      
T  25920395 tcgtgttagaagggtattttggtcatttggtgattaagggtaaattagtaatttt--gatgaggattatttttagtatttagtaagaaccattattttgc 25920298  T
Q  109 taagttactagtgtggtaattagt 132  Q
    |||||||||||  | |||||||||    
T  25920297 taagttactaggatagtaattagt 25920274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 16887291 - 16887377
Alignment:
Q  43 taagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    ||||||||| | ||||||||   |||||| ||||||||||||| |||||| |||  ||||||||| |||||| |||| || |||||||||    
T  16887291 taagggtaaattagtaattt---ggtgagaattatttttagtgtttagtgagaaccattattttactaagttgctagagtagtaattagt 16887377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 26519085 - 26519140
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    ||||||||||||| ||||||||   |||||||||| |||||| |||||||||||||    
T  26519085 gtcattttgtaagcaagggtaaaatagtaattttatggtgagaattatttttagtg 26519140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 14153008 - 14152918
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| |||||||||||||| ||||||||| ||  ||   ||||||| |||  ||| |||||||||||| |||  ||||||||||||    
T  14153008 attattttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttattagtattttaccgttgagttagtagaaacattt 14152918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 16299524 - 16299593
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| |||   |||||||| |||||||||||||| || |||||||||    
T  16299524 ggtgagaattatttttaatggttagtgagaacccttattttactaagttactagtgtagtgattagtttt 16299593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 17547210 - 17547283
Alignment:
Q  103 ttttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    ||||| |||||||||||||| ||||||||| ||  ||   ||||| ||||| |||| |||||||||||||||||    
T  17547210 ttttactaagttactagtgtagtaattagtattttacctttaagtaatcgttgttagtattttaccgttaagtg 17547283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 19175812 - 19175768
Alignment:
Q  145 agtgatcgtcgttattatttt-accgttaagtgggtagaaacatt 188  Q
    |||||||||  |||||||||| |||||||||||||||||||||||    
T  19175812 agtgatcgttattattatttttaccgttaagtgggtagaaacatt 19175768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 49072468 - 49072246
Alignment:
Q  18 aatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg-cttag-tgtgaattattattttattaagtta 115  Q
    |||| |||||| || ||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||| ||  ||| ||||||||| |||||||    
T  49072468 aatggtattttggttattttgtaagtaagggtaatttagtaatttcatggtgaggattatttttagtgtcttaggtgataatcattattttactaagtta 49072369  T
Q  116 ctagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta 215  Q
    ||| |||  ||||||||| ||| |  ||| |||||| |  ||||||||||||||||||||| |||||||||||| || || || |||||||||||||| |    
T  49072368 ctaatgtaataattagttgtgagccggtaggtgatcattattattattttaccgttaagtgagtagaaacattttgtaaatggtttagtaaatgggttaa 49072269  T
Q  216 -cccattaaggcattaatggtta 237  Q
     |||||||||||||||| |||||    
T  49072268 gcccattaaggcattaagggtta 49072246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 47467807 - 47467991
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | || |||||||||||||| ||||||||||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||    
T  47467807 tttcgtgttagaagggtaatttagtcattttgtgagtaagggtaatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattatt 47467906  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||| |||||||||||||||||||||  || |  ||||||||| || |||||||||||||||||||||| ||||||||||||    
T  47467907 ttactaaattactagtgtggtaattagttaggagccggtaagtgattgttgttattattttaccgttaagtgagtagaaacattt 47467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 12133088 - 12133250
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggta 126  Q
    |||||||||| ||||||||||| | |||||||||| |||| || ||||||| ||||| ||  |||| |||  ||||||||| ||||||||||||||||||    
T  12133088 gtcattttgtgagtaagggtaaattagtaattttatggtgggggttattttgtagtgtttcaagtgagaaccattattttactaagttactagtgtggta 12133187  T
Q  127 attagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||| |  |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  12133188 attagttttgagccggtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 12133250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 19560134 - 19559966
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||  |||| |||  |||||||||  |||||||||||    
T  19560134 tattttggtcattttgtaagtaagggtaatttagtaatttcatggtgaggattatttttagtgtttcaagtgagaaccattattttacaaagttactagt 19560035  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||||| ||| |  |||| ||||||| ||  || ||||||||||||||| ||||||||||||    
T  19560034 gtggtaattagttgtgagccggtaaatgatcgttgtattttttttaccgttaagtgagtagaaacattt 19559966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 54362784 - 54362931
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||| | |||||||| | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |      
T  54362784 aagggtaaattagtaatttcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccg 54362883  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  54362884 gtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 54362931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 18235694 - 18235840
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| ||||| |||| |||||||||||| ||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| || |    
T  18235694 agggtaatttagtaaatttatggtgaggattatatttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagctgg 18235793  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||| |||||| ||||||||||| | | ||||||||||||    
T  18235794 taagtgatcgttgttattgttttaccgttaggagagtagaaacattt 18235840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 41255847 - 41256012
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||| |||||||||||||| ||||||||  | |||| ||||||||||||| || |||| |||  ||||||||| |||||||||||||    
T  41255847 tattttggtcattttgtgagtaagggtaatta-gtaattttttg-tgagaattatttttagtgttttagtgagaaccattattttactaagttactagtg 41255944  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||||| ||| |  |||||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  41255945 tggtaaatagttgtgagccggtaagtgaccgttgttagtattttaccgttaagtgtgtagaaacattt 41256012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 13589565 - 13589712
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||| ||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||| ||||||||| ||| |      
T  13589565 aaggataatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtgctaattagttgtgagccg 13589664  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||    
T  13589665 gtaagtgatcgttgttattattttaccgttaaatgagtagaaacattt 13589712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 54399136 - 54398989
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||| ||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| |||||||| |||||||||| ||||| ||| |      
T  54399136 aaggataatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttaccagtgtggtaaatagttgtgagccg 54399037  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  54399036 gtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 54398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 38765456 - 38765312
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagt 143  Q
    ||||||||| |||||||||  |||||| ||||||||||||| || |||| |||  ||||||||| ||||||||||||||||||| ||||| ||| |  ||    
T  38765456 agggtaatttagtaattttt-ggtgagaattatttttagtgttttagtgagaaccattattttactaagttactagtgtggtaaatagttgtgagccggt 38765358  T
Q  144 aagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  38765357 aagtgaccgttgttagtattttaccgttaagtgtgtagaaacattt 38765312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 41916240 - 41916385
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| ||| ||||||||| ||||||||||| ||| |  |    
T  41916240 agggtaatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaaattactagtgcggtaattagttgtgagccgg 41916339  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  41916340 taagtgatcgttgttattatttta-cgttaagagggtagaaacattt 41916385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 15012763 - 15012927
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| ||||||||||  ||||||||||||| ||||||||  |||||| ||||||||||||| || |||| ||   ||||||||| |||||||||||||    
T  15012763 tattttggtcattttgtgggtaagggtaatta-gtaattttt-ggtgagaattatttttagtgttttagtgagacccattattttactaagttactagtg 15012860  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||||| |||||  |||||||| ||| |||| || |||||||||||||| ||| ||||||||    
T  15012861 tggtaaatagttgtgaaccggtaagtgaccgttgttacta-tttaccgttaagtgtgtaaaaacattt 15012927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 10236788 - 10236908
Alignment:
Q  70 aggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttac 167  Q
    |||||||||||||||| ||  |||| |||  ||||||| | ||||||||||||||||||||||||| ||| |  |||||||||||| |||||||||||||    
T  10236788 aggattatttttagtgtttcaagtgagaaccattattt-actaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttattattttac 10236886  T
Q  168 cgttaagtgggtagaaacattt 189  Q
    ||||||| | ||||||||||||    
T  10236887 cgttaagggagtagaaacattt 10236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 28428535 - 28428356
Alignment:
Q  6 gtttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattat 103  Q
    |||||||||||||  | || ||| |||||||||| ||||||| ||||| ||||||     ||||| ||||||||| |||| ||  |||| |||  |||||    
T  28428535 gtttcgtgttagacgggtaatttggtcattttgtgagtaagg-taatttagtaat-----ggtgatgattattttcagtgtttcaagtgagaaccattat 28428442  T
Q  104 tttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||| |||||||||||||||||||||||||  || | |||||||||| || ||  |||||||||||||||||| ||||||||||||    
T  28428441 tttactaagttactagtgtggtaattagttgcgagccagtaagtgattgttgtatttattttaccgttaagtgagtagaaacattt 28428356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 15213189 - 15213309
Alignment:
Q  117 tagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta- 215  Q
    |||||| |||||||||| ||| ||||| ||||||| |  |||||||||| |||||||||| |||||||||||| ||||| || |||||||||||||| |     
T  15213189 tagtgtagtaattagttgtgagctagtgagtgatcattattattattttgccgttaagtgagtagaaacattttgtgaatggtttagtaaatgggttaag 15213288  T
Q  216 cccattaaggcattaatggtt 236  Q
    ||||||||||| |||| ||||    
T  15213289 cccattaaggctttaaaggtt 15213309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 50219439 - 50219586
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | ||||| |||||||||||||  ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| ||     
T  50219439 aagggtaatttagtaaattcatggtgatgattatttttagtatttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagctg 50219538  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
     ||||||||||  |||||||||||| ||||||| | ||||||| ||||    
T  50219539 ataagtgatcgctgttattattttatcgttaagagagtagaaatattt 50219586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 10375261 - 10375136
Alignment:
Q  66 ggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatt 163  Q
    |||||| ||||||||||||| ||  |||| |||  |||||||||  |||| ||||||||||||||||||| ||| |  |||||||| ||| |||||||||    
T  10375261 ggtgagaattatttttagtgtttcaagtgagaaccattattttaccaagtaactagtgtggtaattagttgtgagccggtaagtgaccgttgttattatt 10375162  T
Q  164 ttaccgttaagtgggtagaaacattt 189  Q
     |||||||||||| ||||||||||||    
T  10375161 ctaccgttaagtgagtagaaacattt 10375136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 7185337 - 7185453
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    ||||||||||||||||| ||||||||||| | |||||||||  | ||| ||||||||||| || || |||| |||  ||||||||| |||||||||||||    
T  7185337 tattttagtcattttgtgagtaagggtaaattagtaattttt-gatgatgattatttttattgttttagtgagaaccattattttactaagttactagtg 7185435  T
Q  122 tggtaattagttttgaac 139  Q
    |||||||||||| |||||    
T  7185436 tggtaattagttgtgaac 7185453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 40904391 - 40904575
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | || ||| ||||||| ||||||||||||| || ||||| || | |||||||||||||||||||| ||  ||||  ||  ||||||    
T  40904391 tttcgtgttagaagggtaatttggtcatttggtaagtaagggtactttagtaaattcatggtgaggattatttttagtgtttcaagtgaaaaccattatt 40904490  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||||| || ||| |||||||||| ||| |   ||  ||| | | |||||||||||||||||| ||| ||||||||||||    
T  40904491 ttactaagttattaatgtagtaattagttgtgagccgatatatgaccattgttattattttaccgttaggtgagtagaaacattt 40904575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 15213062 - 15213121
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattattttta 82  Q
    |||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  15213062 tattttggtcattttgtaagtaagggtaatttagtaatttcatggtgaggattattttta 15213121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 7964230 - 7964354
Alignment:
Q  66 ggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    |||||||||||||||||||| || ||   |||  ||||||||| |||||||| |||| | ||||||||| |||||   ||||||||||| |||| |||||    
T  7964230 ggtgaggattatttttagtgttttagcaagaaccattattttactaagttaccagtgagataattagttgtgaaccgttaagtgatcgttgttagtattt 7964329  T
Q  165 taccgttaagtgggtagaaacattt 189  Q
    |||| ||||| | ||||||||||||    
T  7964330 taccattaagagtgtagaaacattt 7964354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 14499681 - 14499800
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||| | |||||| ||||||| |  |||||||||||   |||||||||  |||| | ||||||||||||| |||||| |||  ||||||||| |||||    
T  14499681 ttagaagggtattttggtcatttagcgagtaagggtaaaatagtaatttt--ggtgtgaattatttttagtggttagtgagaaccattattttactaagt 14499778  T
Q  114 tactagtgtggtaattagtttt 135  Q
    ||||||||| ||||||| ||||    
T  14499779 tactagtgtagtaattaatttt 14499800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 24238323 - 24238233
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||| ||||||| ||||||||| ||| |  ||||||||||||   ||||||| |||||||||||| ||||||| ||||    
T  24238323 attattttactaagttattagtgtgataattagttgtgagccggtaagtgatcgttactattattataccgttaagtgagtagaaatattt 24238233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 13441826 - 13441927
Alignment:
Q  34 ttttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaa-gttactagtgtggtaatta 130  Q
    |||||| ||||||||||||| ||||| || | | |||||||||||||||||| ||  |||| |||  ||||||||| ||| |||||||||||||||||||    
T  13441826 ttttgtgagtaagggtaatttagtaaattcatg-tgaggattatttttagtgtttcaagtgagaaccattattttactaaagttactagtgtggtaatta 13441924  T
Q  131 gtt 133  Q
    |||    
T  13441925 gtt 13441927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 32460201 - 32460319
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||| | |||||| ||||||| |  |||||||||||   |||||||||  |||||| ||||||||||||  |||||| |||  ||||||||| |||||    
T  32460201 ttagaagggtattttggtcatttagcgagtaagggtaaaatagtaatttt--ggtgagaattatttttagtt-ttagtgagaaccattattttactaagt 32460297  T
Q  114 tactagtgtggtaattagtttt 135  Q
    ||||||||| ||||||| ||||    
T  32460298 tactagtgtagtaattaatttt 32460319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 18277163 - 18277039
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattatttt-attaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    |||||| |||||| |||||| |||||| |||  |||||||| | |||||||||| |||||| |||||| ||  ||   ||||||| |||  ||| |||||    
T  18277163 ggtgagaattattcttagtgattagtgagaaccattatttttactaagttactattgtggttattagtattttaccgttaagtgaccgttattagtattt 18277064  T
Q  165 taccgttaagtgggtagaaacattt 189  Q
    |||||||||| | ||||||||||||    
T  18277063 taccgttaagagtgtagaaacattt 18277039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 40885014 - 40885122
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg-cttagtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||| | ||||||||||| | |||||||||  | |||| |||||||||||||  |||||| |||  ||||||||  ||||||||||| |    
T  40885014 tattttggtcattttatgagtaagggtaaattagtaatttt--gatgagaattatttttagtgttttagtgagaacaattattttgctaagttactagag 40885111  T
Q  122 tggtaattagt 132  Q
    | |||||||||    
T  40885112 tagtaattagt 40885122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 9652689 - 9652627
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    |||||| |||||| ||| || |||||||| | |||||||| || |||||||||||||||||||    
T  9652689 tattttggtcattgtgtgagcaagggtaaattagtaatttcactgtgaggattatttttagtg 9652627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 19021202 - 19021133
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| |||   |||||||| |||||||||||||| || |||||||||    
T  19021202 ggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttt 19021133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 54734482 - 54734421
Alignment:
Q  252 aacatcaaaagtttcctaacggcacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    ||||||||||  |||||||   ||||||||||||||||||||| || || ||||||||||||    
T  54734482 aacatcaaaaccttcctaaaaacacatgtaaaatacttaaatgtccgcaacggtagttaact 54734421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 16292281 - 16292465
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | || ||| |||||||||| ||||||||||||| | |||||| | |||||||||||||||||||| ||  |||| |||  ||||||    
T  16292281 tttcgtgttagaagggtaatttggtcattttgtgagtaagggtaatttattaatttcatggtgaggattatttttagtgtttcaagtgagaaccattatt 16292380  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||||||||||||| ||||||||| ||| |  |||||||||||| ||  |||||||||||||||||| ||||||||||||    
T  16292381 ttactaagttactagtgtgttaattagttgtgagccggtaagtgatcgttgtatttattttaccgttaagtgagtagaaacattt 16292465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 29115145 - 29114928
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||  ||||||||||||| ||||||||   ||||||| ||| |||||||| ||  |||| |||  ||||||||| ||||||||||||    
T  29115145 tattttggtcattttgcgagtaagggtaatttagtaatttcttggtgagggttacttttagtgtttcaagtgagaaccattattttactaagttactagt 29115046  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-ccca 219  Q
    || || ||||||  ||| | |||||||||||||  |||||||||||||||| |||| |||| ||||||||||||| || |||||||||||||| | |||     
T  29115045 gtagtgattagtcgtgagccagtaagtgatcgttattattattttaccgttcagtgagtagtaacatttcgtgaatggtttagtaaatgggttaagccct 29114946  T
Q  220 ttaaggcattaatggtta 237  Q
    |||||||||||| |||||    
T  29114945 ttaaggcattaagggtta 29114928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 24278550 - 24278366
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | ||  || |||||||||  ||||||| |||||  ||||||| | |||||||||||||||||||| ||  |||| |||  ||||||    
T  24278550 tttcgtgttagaagggtagcttggtcattttgggagtaaggataattttgtaatttcatggtgaggattatttttagtgtttcaagtgagaaccattatt 24278451  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||  ||||||||||||||||||||||||  || |  |||| ||||||| |||||||||||| ||||||||| ||||||||||||    
T  24278450 ttaccaagttactagtgtggtaattagttgcgagccggtaaatgatcgttgttattattttatcgttaagtgagtagaaacattt 24278366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 9638183 - 9638036
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || |  ||||||||||||||||||| ||  | || |||  ||||||||| ||||||||||||||||||||||||| ||| |      
T  9638183 aagggtaatttagtaaattcattgtgaggattatttttagtgtttcaattgagaaccattattttactaagttactagtgtggtaattagttgtgagccg 9638084  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  9638083 gtaaatgatcgttgttattattttaccgttaagtgagtagaaacattt 9638036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 24885437 - 24885284
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    ||||||||||||||||| ||||||||||| | |||||||||  |||||||||||| ||||||| || |||| |||  ||||||||| |||||||||||||    
T  24885437 tattttagtcattttgtgagtaagggtaaattagtaattttt-ggtgaggattatctttagtgttttagtgagaaccattattttactaagttactagtg 24885339  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    | |||||||||| |||||   ||||||| ||| |||| |||||||| ||||||||    
T  24885338 tagtaattagttgtgaaccgttaagtgaccgttgttagtattttactgttaagtg 24885284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 18537450 - 18537361
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| |||||||||||||||||||||| |||||| |  |||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  18537450 attattttactaagttactagtgtggtaatta-ttttgagccggtaaatgatcgttgttattattttaccgttaagtgagtagaaacattt 18537361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 6095432 - 6095286
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    ||||||||| |||||||  | ||||||||||||||| ||||| ||  |||| |||  ||||||||| ||||||||||||||| ||||||||  ||| |      
T  6095432 agggtaatttagtaattc-atggtgaggattattttgtagtgtttcaagtgagaaccattattttactaagttactagtgtgataattagtggtgagccg 6095334  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  6095333 gtaagtgatcgttgttattattttaccgttaagtgagtaaaaacattt 6095286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 25595716 - 25595626
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||||||||||||||||||||| |||    |||||||||| | |||| ||||||||||||||||| ||||||||||||    
T  25595716 attattttactaagttactagtgtggtaattagttgtgagtcggtaagtgatctttgttagtattttaccgttaagtgagtagaaacattt 25595626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 11010461 - 11010306
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaat--------tagtt 133  Q
    |||||||||| | ||| || | |||||||||||| ||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||        |||||    
T  11010461 aagggtaatttaataaattcatggtgaggattatatttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaatgtggtaattagtt 11010362  T
Q  134 ttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
     ||| |  |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  11010361 gtgagccggtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 11010306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 2155320 - 2155430
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| ||||||||||||| |||||| |||  ||||||||| |||||||||||||| ||||||||| ||  ||   ||||||| ||| | || ||||||    
T  2155320 ggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtattttaccgataagtgaccgttgctagtatttt 2155419  T
Q  166 accgttaagtg 176  Q
    |||||||||||    
T  2155420 accgttaagtg 2155430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 22284755 - 22284636
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||||| |||||| ||||||| |  |||||| ||||   |||||||||  |||||| ||||||||||||| |||| | |||  ||||||||| |||||    
T  22284755 ttagaatggtattttggtcatttagcgagtaagagtaaaatagtaatttt--ggtgagaattatttttagtgtttagcgagaaccattattttactaagt 22284658  T
Q  114 tactagtgtggtaattagtttt 135  Q
    ||||||||| ||||||||||||    
T  22284657 tactagtgtagtaattagtttt 22284636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 34456972 - 34457011
Alignment:
Q  274 cacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  34456972 cacaagtaaaatacttaaatgccctcagcggtagttaact 34457011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 25306161 - 25306095
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||||| ||||||||||||| |||||| ||| |||||||||| ||||||||||  || |||||||||    
T  25306161 ggtgagaattatttttagtgtttagtgagaactattattttactaagttactaaagtagtaattagt 25306095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 23821256 - 23821364
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| || |||||| | ||||| |||| | |||||||||  |||||| ||||||||||||| |||||| |||| ||||||||  ||||||||||| ||    
T  23821256 tattttggtaattttggatgtaagagtaaattagtaattttt-ggtgagaattatttttagtgtttagtgagaatcattattttgctaagttactagggt 23821354  T
Q  123 ggtaattagt 132  Q
      ||||||||    
T  23821355 aataattagt 23821364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 23830335 - 23830443
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| || |||||| | ||||| |||| | |||||||||  |||||| ||||||||||||| |||||| |||| ||||||||  ||||||||||| ||    
T  23830335 tattttggtaattttggatgtaagagtaaattagtaattttt-ggtgagaattatttttagtgtttagtgagaatcattattttgctaagttactagggt 23830433  T
Q  123 ggtaattagt 132  Q
      ||||||||    
T  23830434 aataattagt 23830443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 2739 - 2803
Alignment:
Q  68 tgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||| ||||||||||||| ||||||  ||  ||||||||| |||||||||||||| |||||||||    
T  2739 tgagaattatttttagtgtttagtgataaccattattttactaagttactagtgtagtaattagt 2803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 19660676 - 19660561
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| ||||||||  |||||||||||| | |||||||||  ||||| |||||| ||||| | |||||| |||   |||||||| ||||||||| |||     
T  19660676 tattttggtcatttttcaagtaagggtaaattagtaatttt-tggtgaagattatatttagagtttagtgagaaccgttattttactaagttacttgtgc 19660578  T
Q  123 ggtaattagttttgaac 139  Q
     |||||||||| |||||    
T  19660577 agtaattagttgtgaac 19660561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 16936347 - 16936228
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||| | |||||| ||||||| ||  ||||||||||    ||||||||  |||||| |||||||||| || |||||| |||   |||||||| |||||    
T  16936347 ttagaagggtatttttgtcatttggtgggtaagggtaaaatggtaatttt--ggtgagaattatttttaatgtttagtgagaacccttattttactaagt 16936250  T
Q  114 tactagtgtggtaattagtttt 135  Q
    ||||||||| || |||||||||    
T  16936249 tactagtgtagtgattagtttt 16936228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 17007007 - 17006888
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||| | |||||| ||||||| ||  ||||||||||    ||||||||  |||||| |||||||||| || |||||| |||   |||||||| |||||    
T  17007007 ttagaagggtatttttgtcatttggtgggtaagggtaaaatggtaatttt--ggtgagaattatttttaatgtttagtgagaacccttattttactaagt 17006910  T
Q  114 tactagtgtggtaattagtttt 135  Q
    ||||||||| || |||||||||    
T  17006909 tactagtgtagtgattagtttt 17006888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 28030763 - 28030825
Alignment:
Q  73 attatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||||||| || |||||| |||  ||||||||| |||||||||||| | ||||||||||||    
T  28030763 attatttttaatgtttagtgagaaccattattttactaagttactagtatagtaattagtttt 28030825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 16446523 - 16446467
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt 80  Q
    |||||| |||||||||| ||||||||||| | ||||| |||| |||||||||||||||    
T  16446523 tattttggtcattttgtgagtaagggtaaattagtaa-tttatggtgaggattatttt 16446467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 24086953 - 24087010
Alignment:
Q  73 attatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaatta 130  Q
    ||||||||||||| |||||| |||  ||||||||| ||||||||||| || |||||||    
T  24086953 attatttttagtgtttagtgggaaccattattttactaagttactagagtagtaatta 24087010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 31145629 - 31145695
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagt 91  Q
    |||||| |||||||||| |||| ||||||  ||| ||||||  |||||||||||||||||||| |||||    
T  31145629 tattttggtcattttgtgagtacgggtaaaaaagaaatttt--ggtgaggattatttttagtgtttagt 31145695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 5767664 - 5767811
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| |||||||| | |||||||||||||||||||| ||  || | |||| ||||||||| ||||||||||||||||||||||||| ||| ||     
T  5767664 aagggtaatttagtaatttcatggtgaggattatttttagtgtttcaagggagaatcattattttactaagttactagtgtggtaattagttgtgagctg 5767763  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
     ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  5767764 ataagtgatcgttgttattattttaccgttaagtgagtagaaacattt 5767811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 75893 - 76059
Alignment:
Q  26 tttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgt 122  Q
    |||||||||||||| | ||||||||| | |||||||||| ||||||  ||||||| ||||| ||  |||| |||  ||||||||| ||||||||||||||    
T  75893 tttagtcattttgtgaataagggtaaattagtaattttatggtgagagttattttgtagtgtttcaagtgagaaccattattttactaagttactagtgt 75992  T
Q  123 ggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||||||| |  |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  75993 ggtaattagttttgagccggtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 76059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 20839137 - 20838944
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttac-ggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactag 119  Q
    |||||| |||||||||| |||||||||| || |||||||||   ||||||| ||| |||||||| ||  |||| |||  ||||||||| ||||||| |||    
T  20839137 tattttggtcattttgtgagtaagggtattttagtaattttcttggtgagggttacttttagtgtttcaagtgagaaccattattttactaagttattag 20839038  T
Q  120 tgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggtt 213  Q
    ||| |||||||||  ||| |  |||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  20839037 tgtagtaattagtcgtgagccggtaaatgatcgttattattattttaccgttaagtgagtagaaacatttcgtgaacggtttagtaaatgggtt 20838944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 21195752 - 21195608
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagt 143  Q
    ||||||||| |||||||||  |||||||||||||||||||| || ||||||||  ||||||||| ||||||||||||||||||| ||||| ||| || ||    
T  21195752 agggtaatttagtaattttt-ggtgaggattatttttagtgttttagtgtgaaccattattttactaagttactagtgtggtaaatagttgtgagctggt 21195654  T
Q  144 aagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  21195653 aagtgaccgttgttagtattttaccgttaagtgtgtagaaacattt 21195608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 33398077 - 33397952
Alignment:
Q  66 ggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatt 163  Q
    |||||| ||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |  |||||||||||| |||||||||    
T  33398077 ggtgagaattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttattatt 33397978  T
Q  164 ttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||||| ||||||||||||    
T  33397977 ttaccgttaagtgagtagaaacattt 33397952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 40435762 - 40435909
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| |||||||||| ||||||||||| || |||   |    
T  40435762 aagggtaatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactattgtggtaattaattgtgagtca 40435861  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  40435862 gtaagtgatcgttgttattattttaccgttaagtgagtagaaatattt 40435909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 25094633 - 25094464
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattattttt-agtgctt--agtgtgaattattattttattaagttactag 119  Q
    |||||| |||||||| | ||||||||||||| |||||||| | ||||| |||||||||| |||| ||  |||| |||  ||||||||||| |||||||||    
T  25094633 tattttggtcattttatgagtaagggtaatttagtaatttcatggtgatgattattttttagtgtttcaagtgggaaccattattttatttagttactag 25094534  T
Q  120 tgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||| ||| ||| |  ||||||| || | |||||||||||||||||||||| ||||||| ||||    
T  25094533 tgtggtaattcgttgtgagccggtaagtggtctttgttattattttaccgttaagtgagtagaaatattt 25094464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 22142813 - 22142964
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| |||||||||  ||||||||||| | |||||||||  | |||||||||||||||||| |||||| |||  ||||||||| ||||||||||||||    
T  22142813 tattttggtcattttgcgagtaagggtaaattagtaatttttag-tgaggattatttttagtgtttagtgagaaccattattttactaagttactagtgt 22142911  T
Q  123 ggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    ||||||||||  ||||| | ||||||| ||| |||| |||||| ||||||||||    
T  22142912 ggtaattagtagtgaaccattaagtgaccgttgttagtatttt-ccgttaagtg 22142964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 18851887 - 18852034
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | ||||| |||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| |||        
T  18851887 aagggtaatttagtaaattcatggtgacgattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagtcg 18851986  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
     ||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  18851987 ctaagtgatcgttgttattattttaccgttaagtgagtataaacattt 18852034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 5470471 - 5470629
Alignment:
Q  31 tcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaatt 129  Q
    ||||||||| ||||| ||||||| ||||| || | | |||||||||||||||||| || ||||| ||| ||||||||| |||||||||| ||||||||||    
T  5470471 tcattttgtgagtaaaggtaatttagtaaattcatg-tgaggattatttttagtgttttagtgtaaatcattattttactaagttactattgtggtaatt 5470569  T
Q  130 agttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||| |||    |||| ||||||| |||| |||||||||||||||||  |||||||||||    
T  5470570 agttgtgagtcggtaaatgatcgttgttagtattttaccgttaagtgaatagaaacattt 5470629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 7322868 - 7323077
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | ||||||||||||||||   | |||||||||| | |||||| | ||||||||||||| |||||| ||  |||| |||  ||||||    
T  7322868 tttcgtgttagaagggtattttagtcattttgcgggaaagggtaatttaataatttcatggtgaggattattgttagtgtttcaagtgagaaccattatt 7322967  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttatta-ttttaccgttaagtgggtagaaacatttcgtgaacggattag 203  Q
    ||| |||||||||||||||| |||||||| ||| |  ||||||||  ||  |||||| ||||||||||||||| ||||||| || | |||   || ||||    
T  7322968 ttactaagttactagtgtggaaattagttgtgagccggtaagtgactgttattattatttttaccgttaagtgagtagaaatatcttgtgggtggtttag 7323067  T
Q  204 taaatgggtt 213  Q
    ||||||||||    
T  7323068 taaatgggtt 7323077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 17609657 - 17609534
Alignment:
Q  67 gtgaggattatttttagtgcttagtgtgaattattatttt-attaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    ||||| ||||||||||||| |||||| |||  |||||||| | |||||||||||||||||||||||| ||  ||   ||||||| ||| |||| ||||||    
T  17609657 gtgagaattatttttagtgtttagtgagaaccattatttttactaagttactagtgtggtaattagtattttaccgttaagtgaccgttgttagtatttt 17609558  T
Q  166 accgttaagtgggtagaaacattt 189  Q
    ||||||||| | ||||||||||||    
T  17609557 accgttaagagtgtagaaacattt 17609534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 49996838 - 49996924
Alignment:
Q  103 ttttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||| ||||||||||||||||||| ||||| ||| || |||||||| | | |||| ||||||||||||||||| ||||||||||||    
T  49996838 ttttactaagttactagtgtggtaaatagttgtgagctggtaagtgacctttgttagtattttaccgttaagtgtgtagaaacattt 49996924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 17023721 - 17023610
Alignment:
Q  78 ttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgg 177  Q
    |||||||| |||||| |||  ||||||||| |||||||||||||| ||||||||| ||  ||   ||||||| ||| |||| ||||||||||||||| |     
T  17023721 ttttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttagtattttaccgttaagagt 17023622  T
Q  178 gtagaaacattt 189  Q
    ||||||||||||    
T  17023621 gtagaaacattt 17023610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 19603905 - 19603799
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||| | ||||||||||| | |||||||||  | |||||||||||||||||| || |||| |||  ||||||||| |||||||||||||    
T  19603905 tattttggtcattttatgagtaagggtaaattagtaatttt--gatgaggattatttttagtgttttagtgagaaacattattttactaagttactagtg 19603808  T
Q  122 tggtaatta 130  Q
    | |||||||    
T  19603807 tagtaatta 19603799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 8537472 - 8537563
Alignment:
Q  96 attattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||||| ||||||||| ||||| ||| ||||| |||||  |||||||| ||| |||| ||||||||||||||||  ||||||||||||    
T  8537472 attatttttttactaagttactggtgtgataaatagttgtgaaccggtaagtgaccgttgttagtattttaccgttaagt--gtagaaacattt 8537563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 8602711 - 8602802
Alignment:
Q  96 attattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||||| ||||||||| ||||| ||| ||||| |||||  |||||||| ||| |||| ||||||||||||||||  ||||||||||||    
T  8602711 attatttttttactaagttactggtgtgataaatagttgtgaaccggtaagtgaccgttgttagtattttaccgttaagt--gtagaaacattt 8602802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 41219361 - 41219463
Alignment:
Q  73 attatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgtta 172  Q
    ||||||||||||| |||||| |||  ||||||||| |||||||||||||| ||||||||| ||  |||  || |||||||| | || ||||||||| |||    
T  41219361 attatttttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtattttactgataggtgatcgttgctagtattttaccatta 41219460  T
Q  173 agt 175  Q
    |||    
T  41219461 agt 41219463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 16646710 - 16646557
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||   ||||| |||| | |||||||||  |||||| ||||||||||||| || |||| |||  ||||||||| ||||||||||| |    
T  16646710 tattttggtcattttgggtgtaagagtaaattagtaattttt-ggtgagaattatttttagtgttttagtgagaaccattattttactaagttactaggg 16646612  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    | ||||||||| ||  ||   ||||||| ||| | || |||||||||||||||||    
T  16646611 tagtaattagtattttaccgttaagtgaccgttggtaatattttaccgttaagtg 16646557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 51627185 - 51627251
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||||| ||||||||||||| |||||| |||  ||||||||| ||||||||||| || |||||||||    
T  51627185 ggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagagtagtaattagt 51627251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 27675544 - 27675460
Alignment:
Q  46 gggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||||| | ||||||||||  ||||| |||||||||||   |||||| |||  ||||||||| |||||||||||||| |||||||||    
T  27675544 gggtaaattagtaatttta--gtgagaattatttttagcatttagtgagaaccattattttactaagttactagtgtagtaattagt 27675460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 33216371 - 33216410
Alignment:
Q  274 cacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  33216371 cacaagtaaaatacttaaatgctctcagcggtagttaact 33216410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 20177906 - 20177840
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||||| ||||||||||| | ||||||  ||  ||||||||| |||||||||||||| |||||||||    
T  20177906 ggtgagaattatttttagagtttagtgaaaaccattattttactaagttactagtgtagtaattagt 20177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 37233347 - 37233413
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||||| ||||||||||||  |||||| | |  ||||||||| ||||||||||||||||| ||||||    
T  37233347 ggtgagaattatttttagtatttagtgaggaccattattttactaagttactagtgtggttattagt 37233413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 20348364 - 20348336
Alignment:
Q  10 cgtgttagaatgatattttagtcattttg 38  Q
    |||||||||||||||||||||||||||||    
T  20348364 cgtgttagaatgatattttagtcattttg 20348336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 237
Target Start/End: Original strand, 2258 - 2473
Alignment:
Q  24 attttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtg 121  Q
    ||||| |||||||||||||||||||||||| |||||||  | ||||| |||||||||||||| ||  |||| |||  ||||||||| |||||||||||||    
T  2258 attttggtcattttgtaagtaagggtaatttagtaattccatggtgatgattatttttagtgtttcaagtgagaaccattattttactaagttactagtg 2357  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-cccat 220  Q
    | |||||||||| ||| | ||| |||| ||||  |||||| |||||||||||||| |||||||||||| || |  || |||||||||||||| | |||||    
T  2358 tagtaattagttgtgagccagtgagtggtcgttattatta-tttaccgttaagtgagtagaaacattttgtaattggtttagtaaatgggttaagcccat 2456  T
Q  221 taaggcattaatggtta 237  Q
    |||| |||||| |||||    
T  2457 taagacattaagggtta 2473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 38348 - 38164
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||||||| | || ||| |||||||||| ||||||||||||| |||| ||| | |||||| ||||||||||||| ||  |||| |||  ||||||    
T  38348 tttcgtgttagaagggtaatttggtcattttgtgagtaagggtaatttagtagtttcatggtgagaattatttttagtgtttcaagtgagaaccattatt 38249  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||||||||||||||||||||||||| ||| |  |||||||||||| |||| |||||||||||||||||  || ||||||||    
T  38248 ttactaagttactagtgtggtaattagttgtgagccggtaagtgatcgttgttagtattttaccgttaagtgaatataaacattt 38164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 6621 - 6427
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||||||||||  ||||| |||||||| | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||    
T  6621 tattttggtcattttgtaagtaagattaatttagtaatttcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagt 6522  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta 215  Q
    ||  ||||||||| |||||  ||||||||||||  ||||||||||| |||| |||| |||||||||||| || || || ||||| |||| |||||    
T  6521 gtaataattagttgtgaaccggtaagtgatcgttattattattttatcgttgagtgagtagaaacattttgtaaatggtttagtgaatgagttta 6427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 28248 - 28102
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||| ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| |||||  |    
T  28248 agggtaatttagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgaaccgg 28149  T
Q  143 taagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  28148 taagtgatcgttgttagtattttaccgttaagtgagtagaaacattt 28102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 87145 - 86961
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    ||||||||| ||| | || |||||||||||||| ||||||||||||| ||||  || | ||||||||||||||||| || ||  |||| |||  ||||||    
T  87145 tttcgtgtttgaagggtaatttagtcattttgtgagtaagggtaatttagtatattcatggtgaggattatttttaatgtttcaagtgagaaccattatt 87046  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    | | ||||||| ||||||||||||||||| ||| |  |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  87045 tcactaagttaatagtgtggtaattagttgtgagccggtaagtgatcgttgttattattttaccgttaagtgagtataaacattt 86961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 44 - 237
Target Start/End: Complemental strand, 13517 - 13321
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||| | |||||||| | || || ||||| |||||||| ||  |||| |||  ||||||||| ||||||||||||| ||||||||||| ||| |      
T  13517 aagggtaaattagtaatttcatggcgatgattagttttagtgtttcaagtgagaaccattattttactaagttactagtgcggtaattagttgtgagccg 13418  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-cccattaaggcattaatggtta 237  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||| || || || |||||||||||||| | |||||||||||||||| |||||    
T  13417 gtaagtgatcgttattattattttaccgttaagtgagtagaaacatttggtaaatggtttagtaaatgggttaagcccattaaggcattaagggtta 13321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 6e-34; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 11762972 - 11763180
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactag 119  Q
    |||||| |||||||||  ||||||||||| | |||||||| | | ||||| ||||||| ||||| ||  |||| |||  ||||||||||||||||||||     
T  11762972 tattttggtcattttgcgagtaagggtaaattagtaatttcatgatgagggttattttgtagtgttttgagtgagaaccattattttattaagttactaa 11763071  T
Q  120 tgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-ccc 218  Q
    ||||||| |||||| ||||| |||||||||||||  ||||| |||||||||||| || ||| ||| |||| |||||||| |||||||||||||| | |||    
T  11763072 tgtggtatttagttgtgaaccagtaagtgatcgtttttattgttttaccgttaaatgagtaaaaatattttgtgaacggtttagtaaatgggttaagccc 11763171  T
Q  219 attaaggca 227  Q
    |||||||||    
T  11763172 attaaggca 11763180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 21215913 - 21216081
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||| ||||||||||||| |||||||| |  ||||||||||||||||||| ||  |||| |||  ||||||||| |||||||||||     
T  21215913 tattttggtcattttgtgagtaagggtaatttagtaatttcatagtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagg 21216012  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||| ||||| ||| |  ||||||||||||  ||| ||||||||| ||||||| ||||||||||||    
T  21216013 gtggtaaatagttgtgagccggtaagtgatcgttattagtattttaccattaagtgtgtagaaacattt 21216081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 19874511 - 19874364
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | |||||||||| ||||| ||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |      
T  19874511 aagggtaatttagtaaattcatggtgaggattctttttggtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccg 19874412  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  19874411 gtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 19874364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 16834791 - 16834938
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaacta 141  Q
    |||||||||| ||||| || | |||||| ||||||||||||| ||  |||| |||  ||||||||  ||||||||||||||||||||||||| ||| |      
T  16834791 aagggtaatttagtaaattcatggtgagaattatttttagtgtttcgagtgagaaccattattttgctaagttactagtgtggtaattagttatgagccg 16834890  T
Q  142 gtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  16834891 gtaagtgatcgttgttattattttaccgtcaagtgagtagaaacattt 16834938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 21110537 - 21110355
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctta-gtgtgaattattattt 105  Q
    ||||||||||||| | || ||| |||||||||| ||||||||||||| ||||| || | | ||||| |||||||||||| ||| ||| |||  |||||||    
T  21110537 tttcgtgttagaagggtaatttggtcattttgtgagtaagggtaatttagtaaattcatg-tgagggttatttttagtgtttaagtgagaaccattattt 21110439  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || ||||||||||||||||||||||||| |||     ||||||||||| |||| ||||||| ||||||||| ||| ||||||||    
T  21110438 tactaagttactagtgtggtaattagttgtgagtcgataagtgatcgttgttagtattttatcgttaagtgagtaaaaacattt 21110355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 26559284 - 26559458
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt 106  Q
    |||| |||||||||| || ||| |||||||||| ||||||||||||| ||||| || | | ||||||||||||||||||        |||  ||||||||    
T  26559284 tttcttgttagaatggtaatttggtcattttgtgagtaagggtaatttagtaaattcatg-tgaggattatttttagtga-------gaaccattatttt 26559375  T
Q  107 attaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    | ||||||||||||||||||||||||| |||    |||||||||||| |||| ||||||||||||||||| ||| ||||||||    
T  26559376 actaagttactagtgtggtaattagttgtgagtcggtaagtgatcgttgttaatattttaccgttaagtgagtaaaaacattt 26559458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 22886368 - 22886224
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagt 143  Q
    ||||||||| | |||||||  |||||| ||||||||||||| || |||| |||  ||||||||| ||||||||||||||||||| ||||| |||||  ||    
T  22886368 agggtaatttaataattttt-ggtgagaattatttttagtgttttagtgagaaacattattttactaagttactagtgtggtaaatagttgtgaaccggt 22886270  T
Q  144 aagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||| |||| ||||||| ||||||||| ||||||||||||    
T  22886269 aagtgaccgttgttagtattttatcgttaagtgtgtagaaacattt 22886224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 21222128 - 21222251
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattatttt 165  Q
    |||||| ||||||||||||| |||||| |||  ||||||||| |||||||||||||||||||||||| ||  ||   ||||||| ||| |||| ||||||    
T  21222128 ggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagtgtggtaattagtattttaccgttaagtgaccgttgttagtatttt 21222227  T
Q  166 accgttaagtgggtagaaacattt 189  Q
    ||||||||| | ||||||||||||    
T  21222228 accgttaagagagtagaaacattt 21222251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 23234004 - 23234153
Alignment:
Q  44 aagggtaattaagtaattttac--ggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaac 139  Q
    |||||||||| ||||| ||| |  |||||||||||||||||||| ||  |||  |||| ||||| ||| ||||||||||||||||||||||||| ||| |    
T  23234004 aagggtaatttagtaaattttcatggtgaggattatttttagtgtttcaagtaagaatcattatcttactaagttactagtgtggtaattagttgtgagc 23234103  T
Q  140 tagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
     ||||||||| ||| ||||||||||||| || ||||| ||||||| ||||    
T  23234104 cagtaagtgaccgttgttattattttactgtgaagtgagtagaaatattt 23234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 6457375 - 6457208
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatttt-attaagttactag 119  Q
    |||||| |||||||||| ||||||||||| | |||||||||  ||||||||||||||| |||| ||  || | |||  |||||||| | |||||||||||    
T  6457375 tattttggtcattttgtgagtaagggtaaattagtaattttt-ggtgaggattatttt-agtgtttcaagcgagaaccattatttttactaagttactag 6457278  T
Q  120 tgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||| ||||| ||| |  |||||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  6457277 tgtggtaaatagttgtgagccggtaagtgaccgttgttagtattttaccgttaagtgtgtagaaacattt 6457208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 29918840 - 29918673
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||| ||||||| ||| | |||||||||  |||||||| ||||||||||| ||  |||| ||   ||||||||| ||||||||||||    
T  29918840 tattttggtcattttgtgagtaaggataaattagtaattttt-ggtgaggagtatttttagtgtttcaagtgagagccattattttactaagttactagt 29918742  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||| ||| ||||| ||| |   ||||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  29918741 gtgataaatagttgtgagccgataagtgaccgttgttagtattttaccgttaagtgtgtagaaacattt 29918673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 23417939 - 23417849
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||||| ||||||||||||||||| | |   |||||||| || |||||||||||||||||||||| ||||||||||||    
T  23417939 attattttactaagttactggtgtggtaattagtttttagccgataagtgattgttgttattattttaccgttaagtgagtagaaacattt 23417849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 11966084 - 11965964
Alignment:
Q  45 agggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||  ||||| || | |||||||||||||||||||| ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |  |    
T  11966084 agggtaatgtagtaaattcatggtgaggattatttttagtgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagccgg 11965985  T
Q  143 taagtgatcgtcgttattatt 163  Q
    ||||||||||| |||||||||    
T  11965984 taagtgatcgttgttattatt 11965964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 5621248 - 5621414
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattt 105  Q
    ||||||||||||| | || |||  |||| |||| |||||| |||||| ||||| || | | |||||||||||||||||| || |||| |||  |||||||    
T  5621248 tttcgtgttagaaaggtaatttgttcatgttgtgagtaagagtaatttagtaaattcatg-tgaggattatttttagtgttttagtgagaaccattattt 5621346  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaa 173  Q
    || ||||||||||||||| |||||||||  ||    |||||||||||| |||| ||||||||||||||    
T  5621347 tactaagttactagtgtgataattagttgcgagtcggtaagtgatcgttgttagtattttaccgttaa 5621414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 5450289 - 5450441
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg-cttagtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||   ||||| |||| | |||||||||  ||||||||||||||||||||  |||||| |||| ||||||||| ||||||||| ||     
T  5450289 tattttggtcattttgggtgtaagagtaaattagtaattttt-ggtgaggattatttttagtgttttagtgagaatcattattttactaagttacttgta 5450387  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    | |||||||||| |||||   ||||||| | | |||| ||||||| |||||||||    
T  5450388 tagtaattagttgtgaaccgttaagtga-ctttgttagtattttatcgttaagtg 5450441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 32358832 - 32358756
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagt 175  Q
    ||||||||| ||||||||||||||| ||||||||| ||| |  |||| ||||||| |||||||||||| | ||||||    
T  32358832 attattttactaagttactagtgtgataattagttgtgagccggtaactgatcgttgttattattttagcattaagt 32358756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 7529634 - 7529572
Alignment:
Q  73 attatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||||||||||  ||||| |||  ||||||||| |||||||||||||| ||||||||||||    
T  7529634 attatttttagtgtatagtgagaaccattattttactaagttactagtgtagtaattagtttt 7529572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 37984142 - 37984033
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||   ||||| |||| | |||||||||   ||||||||||||||||||| || || | |||  ||||||||| |||||||||||||    
T  37984142 tattttggtcattttgggtgtaagagtaaattagtaattttt--gtgaggattatttttagtgttttagcgagaaccattattttactaagttactagtg 37984045  T
Q  122 tggtaattagtt 133  Q
    | ||||||||||    
T  37984044 tagtaattagtt 37984033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 23467181 - 23467122
Alignment:
Q  73 attatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    ||||||||||||| |||||| |||||||||||||  ||||||||||| ||  ||||||||    
T  23467181 attatttttagtgtttagtgggaattattattttgctaagttactagggtaataattagt 23467122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 32965231 - 32965342
Alignment:
Q  66 ggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    |||||| ||||||||||||| || |||| |||  ||||||||| ||||||||||| || ||||||| | ||  |||  ||||||| ||| | || |||||    
T  32965231 ggtgagaattatttttagtgttttagtgagaaccattattttactaagttactagggtagtaattaatattttactgttaagtgaccgttggtagtattt 32965330  T
Q  165 taccgttaagtg 176  Q
    ||||||||||||    
T  32965331 taccgttaagtg 32965342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 17910232 - 17910163
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| |||   |||||||| |||||||||||||| || |||||||||    
T  17910232 ggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttt 17910163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 24224865 - 24224974
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattatttt-attaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    |||||| ||||||||||||| || ||| |||  |||||||| | | ||||||||||||||| |||||| ||  ||   ||||||| ||| |||| |||||    
T  24224865 ggtgagaattatttttagtgtttggtgagaaccattatttttactcagttactagtgtggttattagtattttaccgttaagtgaccgttgttagtattt 24224964  T
Q  165 taccgttaag 174  Q
    ||||||||||    
T  24224965 taccgttaag 24224974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 3777714 - 3777774
Alignment:
Q  253 acatcaaaagtttcctaacggcacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    ||||||||||||| |||| | || | |||||||| | ||||||||||| ||||||||||||    
T  3777714 acatcaaaagttttctaaagacataagtaaaatattaaaatgccctcaacggtagttaact 3777774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 32891 - 33064
Alignment:
Q  18 aatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagtta 115  Q
    |||||||||||  ||||||||| | ||||||||||| |||||||| |  ||||||||||||||||||| ||  |||  |||  ||||||||| |||||||    
T  32891 aatgatattttgatcattttgtgattaagggtaatttagtaatttcattgtgaggattatttttagtgtttcaagtaagaaccattattttactaagtta 32990  T
Q  116 ctagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||| ||||||||| || ||| |  |||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  32991 ctagtatggtaattaattgtgagccggtaagtgatcgttgttattattttaccgttaagtgagtagaaatattt 33064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 6539 - 6766
Alignment:
Q  11 gtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttac-ggtgaggattatttttagtgctt--agtgtgaattattatttta 107  Q
    ||||||||| | |||||| |||||||||  | ||||||||||| |||||||||   ||||||| ||| ||||| || ||  |||| |||  |||||||||    
T  6539 gtgttagaagggtattttggtcattttgcgaataagggtaatttagtaattttcttggtgagggttacttttaatgtttcaagtgggaaccattatttta 6638  T
Q  108 ttaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaa 207  Q
     ||||||||||| ||   |||||||  ||| |  ||||||||||||  ||||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  6639 ctaagttactagagt---aattagtcgtgagccggtaagtgatcgttattattattttaccgttaagtgagtagaaacatttcgtgaaaggtttagtaaa 6735  T
Q  208 tgggttta-cccattaaggcattaatggtta 237  Q
    |||||| | |||||||||||||||| |||||    
T  6736 tgggttaagcccattaaggcattaagggtta 6766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 36265 - 36084
Alignment:
Q  6 gtttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattt 105  Q
    |||||||||||||| | |||||| ||||||||   ||||||||||| | |||||||||  |||||||| ||||||||||| ||||||  ||  |||||||    
T  36265 gtttcgtgttagaagggtattttggtcattttacgagtaagggtaaattagtaatttt--ggtgaggaatatttttagtgtttagtgaaaaccattattt 36168  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||  ||||||||||||| ||||||||| ||  ||   ||||||| ||| |||| ||||||||||||  | | ||||||||||||    
T  36167 taccaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttagtattttaccgttgtgagtgtagaaacattt 36084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 67515 - 67605
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||| ||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  67515 attattttactaatttactagtgtggtaattagttttgagctggtaagtgatcgttgttattattttaccgttaagtgagtataaacattt 67605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 132583 - 132418
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| |||||||||| ||||||| ||| | |||||||||  |||||||||||||||||||   ||| | |||  ||||||||| ||||||||||||||    
T  132583 tattttggtcattttgtgagtaaggataaattagtaattttt-ggtgaggattatttttagtatctagcgagaaccattattttactaagttactagtgt 132485  T
Q  123 ggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||| ||||| ||| |  |||||||| ||| |||| ||||||||||||||||| | ||||||||||    
T  132484 ggtaaatagttgtgagccggtaagtgaccgttgttagtattttaccgttaagtgtgcagaaacattt 132418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 43627 - 43763
Alignment:
Q  55 agtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcg 152  Q
    |||||||| |||||||||||||||||||||| ||  |||| |||   |||||||| ||||||||||||||||||||||||| ||| |  |||||||||||    
T  43627 agtaatttcacggtgaggattatttttagtgtttcaagtgagaacctttattttactaagttactagtgtggtaattagttgtgagccggtaagtgatcg 43726  T
Q  153 tcgttattattttaccgttaagtgggtagaaacattt 189  Q
    | ||  | |||||||||||||||| ||||||||||||    
T  43727 ttgtattaattttaccgttaagtgagtagaaacattt 43763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 86279 - 86114
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtg 121  Q
    |||||| |||||||||| |||||||||||||| ||||||||  || ||||||||||||||||| || |||| |||  ||||||||| |||||||||||||    
T  86279 tattttggtcattttgttagtaagggtaatta-gtaattttt-ggcgaggattatttttagtgttttagtgagaaccattattttactaagttactagtg 86182  T
Q  122 tggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||||| ||| |  |||||||| | | |||| ||||| ||||||||||| ||||||| ||||    
T  86181 tggtaaatagttgtgagccggtaagtgacccttgttagtatttgaccgttaagtgtgtagaaatattt 86114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 54063 - 53939
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattatttt-attaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    |||||| ||||||||||||| |||||| |||  |||||||| | |||||||||||||| ||||||||| ||  ||   ||||||| ||| |||| |||||    
T  54063 ggtgagaattatttttagtgtttagtgagaaccattatttttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttagtattt 53964  T
Q  165 taccgttaagtgggtagaaacattt 189  Q
     || |||||| | ||||||||||||    
T  53963 cacagttaagagtgtagaaacattt 53939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 3988 - 3856
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttattaagttactagtgtggtaattagttttgaactag 142  Q
    ||||||||||  ||||||||  |||||||||||||||||||| || ||||||||  ||||||||| ||||||||||||||||||| || || ||| |  |    
T  3988 aagggtaatttcgtaattttt-ggtgaggattatttttagtgttttagtgtgaaccattattttactaagttactagtgtggtaaataattgtgagccgg 3890  T
Q  143 taagtgatcgtcgttattattttaccgttaagtg 176  Q
    ||||||||||| |||| |||||||||||||||||    
T  3889 taagtgatcgttgttagtattttaccgttaagtg 3856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 30747 - 30571
Alignment:
Q  11 gtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattttatt 109  Q
    ||||||||| | || ||| |||||||||| ||||||| ||||| |||||||     ||||||||||||||||||| || |||| |||  ||||||||  |    
T  30747 gtgttagaagggtaatttggtcattttgtgagtaagg-taatttagtaattcat--gtgaggattatttttagtgttttagtgagaaccattattttgct 30651  T
Q  110 aagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||||||||||||||||| ||| |  |||| ||||||| ||  |||||||||||||||||| ||||||||||||    
T  30650 aagttactagtgtggtaattagttgtgagccggtaaatgatcgttgtatttattttaccgttaagtgagtagaaacattt 30571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 22693 - 22603
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||||||||||||||||||||| |||    |||||||||||| |||| ||||||||||||| ||| ||||||||||||    
T  22693 attattttactaagttactagtgtggtaattagttgtgagtcggtaagtgatcgttgttagtattttaccgttaggtgagtagaaacattt 22603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 7226 - 7316
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||||||||||| ||||||||  ||| |  |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  7226 attattttactaagttactagtgtgctaattagtggtgagccggtaagtgatcgttgttattattttaccgttaagtgagtagaaacattt 7316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 357 - 519
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttt-tagtgctt--agtgtgaattattattttattaagttactagtgtggta 126  Q
    |||||| ||| ||||||||||| | |||||||| | ||||| | ||||||| ||||| ||  |||| |||   |||||||  |||||||||| |||||||    
T  357 gtcattctgtgagtaagggtaaattagtaatttcatggtgatggttattttgtagtgtttcaagtgagaaccgttatttttctaagttactattgtggta 456  T
Q  127 attagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||| ||| | ||||||||||||| |||||||||||||  ||||||| ||||||||||||    
T  457 attagttatgagccagtaagtgatcgttgttattattttactattaagtgagtagaaacattt 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 237
Target Start/End: Original strand, 180371 - 180570
Alignment:
Q  31 tcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt---agtgtgaattattattttattaagttactagtgtggtaa 127  Q
    ||||||||||||||||||||||| |||||||| |  ||||| |||||||||   | ||   |||| |||| ||| ||||| |||||||||||| ||||||    
T  180371 tcattttgtaagtaagggtaatttagtaatttcatagtgagaattatttttttagttttcaagtgagaatcattgttttactaagttactagtatggtaa 180470  T
Q  128 ttagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacatttcgtgaacggattagtaaatgggttta-cccattaaggc 226  Q
    |||||| ||| |  |||           ||||||||||||||||||||| |||| || |||||||||| || |||||||||||||| | |||||||||||    
T  180471 ttagttgtgagccggta-----------ttattattttaccgttaagtgagtagtaatatttcgtgaatggtttagtaaatgggttaagcccattaaggc 180559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 9225 - 9101
Alignment:
Q  67 gtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattt 164  Q
    ||||||||||||||||||  ||  |||| |||  ||||||||| ||||||||||||||||||||||||| |||    |||||| ||||  ||||||||||    
T  9225 gtgaggattatttttagtttttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagtcggtaagtaatcgctgttattattt 9126  T
Q  165 taccgttaagtgggtagaaacattt 189  Q
    |||||||||||| ||||||| ||||    
T  9125 taccgttaagtgagtagaaatattt 9101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 19382 - 19566
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattatt 104  Q
    |||||||||| |||| || ||| |||||||||| ||| ||||||||| |||| ||| | ||||||  ||| |||||||| ||  ||||  ||  ||||||    
T  19382 tttcgtgttaaaatggtaatttggtcattttgtgagtgagggtaatttagtattttcatggtgagagttacttttagtgtttcaagtgacaaccattatt 19481  T
Q  105 ttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||  |||||| ||| |||||||||||||| ||| |  || |||| |||| |||| ||||||||||||||||| ||||||||||||    
T  19482 ttgctaagttgctaatgtggtaattagttgtgagccggtgagtggtcgttgttagtattttaccgttaagtgagtagaaacattt 19566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 108781 - 108618
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||| ||||||||||| | |||||||||  ||||||||  |||||||||| ||  |||| |||  |||||||||||||||| ||| |    
T  108781 tattttggtcattttgtgagtaagggtaaattagtaattttt-ggtgaggagcatttttagtgtttcaagtgagaaccattattttattaagttgctatt 108683  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaac 185  Q
    ||||||| ||||| ||| |  |||||||| ||| |||| ||||||  ||||||||| ||||||||    
T  108682 gtggtaaatagttgtgagccggtaagtgaccgttgttagtattttgtcgttaagtgtgtagaaac 108618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 14791 - 14643
Alignment:
Q  44 aagggtaattaagtaattttac--ggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaac 139  Q
    |||||||||| ||||| ||| |  ||||||||||||||||| || ||  |||| |||  ||||||||| ||||||||||||||||||||||||| ||| |    
T  14791 aagggtaatttagtaaattttcatggtgaggattatttttaatgtttcaagtgagaaccattattttactaagttactagtgtggtaattagttgtgagc 14692  T
Q  140 tagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
      ||| |||||||| ||  |||||||||||||||||| ||| ||||||||    
T  14691 cggtaggtgatcgttgtatttattttaccgttaagtgagta-aaacattt 14643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 457 - 609
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagt 120  Q
    |||||| |||||||||| ||||| ||||| | |||| ||||  |||||||||||||||||||| ||  || | |||  ||||||||| ||||||||||||    
T  457 tattttggtcattttgtgagtaacggtaaattagtatttttt-ggtgaggattatttttagtgtttcaagagagaaccattattttactaagttactagt 555  T
Q  121 gtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaag 174  Q
    || |||||||||| ||| |  ||||||| |||| |||| | |||||||||||||    
T  556 gtagtaattagttatgagccggtaagtggtcgttgttagtgttttaccgttaag 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 12107 - 12268
Alignment:
Q  30 gtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaa 127  Q
    |||||||||| ||||||||||||| | ||||||   ||||||||||| || | ||| ||  |||| |||  |||| |||| ||||||| |||||||||||    
T  12107 gtcattttgtgagtaagggtaatttattaatttcttggtgaggattacttgtggtgttttaagtgagaaccattagtttactaagttattagtgtggtaa 12206  T
Q  128 ttagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||| |  |||| ||||| |  ||||||||||||| ||||||| ||| ||||||||    
T  12207 ttagttttgagccggtaaatgatccttattattattttacctttaagtgagtaaaaacattt 12268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 5296 - 5206
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||||||||||||||| ||||| ||| |  |||||||| ||| |||| |||||||| |||||||||||||| ||||||    
T  5296 attattttactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagtattttactgttaagtgggtagacacattt 5206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 67502 - 67582
Alignment:
Q  109 taagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||||||| |||||||||||||| ||| |  ||||||||| || |||||||||||||||||||| | ||||||||||||    
T  67502 taagttactaatgtggtaattagttgtgagccggtaagtgattgttgttattattttaccgttaagagagtagaaacattt 67582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 26452 - 26634
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattt 105  Q
    |||| |||||||| | || ||| |||||||||| |||||||||||||  |||| || | | |||  ||||||||||||| || |||| |||  |||| ||    
T  26452 tttcatgttagaagggtaatttggtcattttgtgagtaagggtaattttgtaaattcatg-tgacaattatttttagtgtttcagtgagaaccattactt 26550  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || ||||||||||||||||||| ||||| ||| |  ||||||||  || ||||  |||||||| ||||||| ||||||||||||    
T  26551 tactaagttactagtgtggtaaatagttgtgagccggtaagtgacagttgttagcattttaccattaagtgtgtagaaacattt 26634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 33921 - 34040
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||| | |||||| ||||||| |  |||||||||||   ||||| |||  |||||| ||||||||||||| |||||| |||  ||||||||| |||||    
T  33921 ttagaagggtattttggtcatttagcgagtaagggtaaaatagtaaattt--ggtgagaattatttttagtgtttagtgagaaccattattttactaagt 34018  T
Q  114 tactagtgtggtaattagtttt 135  Q
    ||||||||| ||||||||||||    
T  34019 tactagtgtagtaattagtttt 34040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 31786 - 31711
Alignment:
Q  55 agtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    ||||||||||  ||||| ||||||||||||| |||||| |||  ||||||||| ||||||||||||||||||||||||    
T  31786 agtaatttta--gtgagaattatttttagtgtttagtgagaaccattattttactaagttactagtgtggtaattagt 31711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 11457 - 11347
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| ||||||| |  |||||||||||   |||||||||  |||||| |||||| |||||| |||||| |||  ||||||||| ||||||||||||||    
T  11457 tattttggtcatttagcgagtaagggtaaaatagtaatttt--ggtgagaattattgttagtgtttagtgagaaccattattttactaagttactagtgt 11360  T
Q  123 ggtaattagtttt 135  Q
     ||||||||||||    
T  11359 agtaattagtttt 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 6422 - 6314
Alignment:
Q  68 tgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttac 167  Q
    ||||||| |||||||||| |||||| ||| |||||||||| ||||||||||| || ||||||||| ||  ||   ||||||| ||| |||  ||||||||    
T  6422 tgaggatcatttttagtgtttagtgggaaatattattttactaagttactagagtagtaattagtattttacctttaagtgaccgttgttgatattttac 6323  T
Q  168 cgttaagtg 176  Q
    |||||||||    
T  6322 cgttaagtg 6314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 23241 - 23326
Alignment:
Q  102 attttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    |||||| ||||||||||||||| | | |||||  |||||||||||||| ||| |||| ||||||||||||||||  ||||||||||||    
T  23241 attttactaagttactagtgtgttgaatagttgcgaactagtaagtgaccgttgttagtattttaccgttaagt--gtagaaacattt 23326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 6207 - 6025
Alignment:
Q  7 tttcgtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctt-agtgtgaattattattt 105  Q
    |||| |||||||| | || ||| |||||||||| |||||||||||||  | || || | | |||  ||||||||||||| || |||| |||  | || ||    
T  6207 tttcatgttagaagggtaatttggtcattttgtgagtaagggtaattttgaaaattcatg-tgacaattatttttagtgtttcagtgagaaccactactt 6109  T
Q  106 tattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    || ||||||||||||||||||| ||||| ||| |  |||||||| ||| ||||  |||||||| ||||||| ||||||||||||    
T  6108 tactaagttactagtgtggtaaatagttgtgagccggtaagtgaccgttgttagcattttaccattaagtgtgtagaaacattt 6025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 25968 - 25878
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtgggtagaaacattt 189  Q
    ||||||||| ||||||||| ||||||||||||||  ||| |  |||||||| ||| ||||||||||||   ||||||| ||||||||||||    
T  25968 attattttactaagttacttgtgtggtaattagtcgtgagccggtaagtgaccgttgttattattttattattaagtgagtagaaacattt 25878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 8080 - 8149
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||| |||||| |||||| |||  ||||||||| |||||||||||||| ||||||||||||    
T  8080 ggtgagaattattgttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtttt 8149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 21940 - 22017
Alignment:
Q  99 attattttattaagttactagtgtggtaattagttttgaactagtaagtgatcgtcgttattattttaccgttaagtg 176  Q
    ||||||||| |||||||||||||| |||||||||| |||||   |||||||  || |||| |||||||||||||||||    
T  21940 attattttactaagttactagtgtagtaattagttgtgaaccgttaagtgactgttgttagtattttaccgttaagtg 22017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 43660 - 43591
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| ||| |||||||||| |||||||||||||| || |||||||||    
T  43660 ggtgagaattatttttaatgtttagtgagaactattattttactaagttactagtgtagtgattagtttt 43591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 45775 - 45685
Alignment:
Q  41 agtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtt 133  Q
    |||||||||||   |||||||||  |||||  ||||||||||||| |||||| |||  ||||||||| |||||||||||||| ||||||||||    
T  45775 agtaagggtaaaatagtaatttt--ggtgataattatttttagtgtttagtgggaaccattattttactaagttactagtgtagtaattagtt 45685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 55131 - 55071
Alignment:
Q  73 attatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtt 133  Q
    ||||||||||||| |||||| |||  ||||||||| |||||| ||||||| ||||||||||    
T  55131 attatttttagtgtttagtgggaaccattattttactaagtttctagtgtagtaattagtt 55071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 34266 - 34370
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgctta-gtgtgaattattatt--ttattaagttactag 119  Q
    |||||| |||||||||| ||| ||||| ||| |||||||| | ||||||| |||||||||||||||| ||| |||  ||||||  ||| |||||||||||    
T  34266 tattttggtcattttgtgagtgagggtgatttagtaatttcatggtgagg-ttatttttagtgcttaagtgagaaccattattatttactaagttactag 34364  T
Q  120 tgtggt 125  Q
    ||||||    
T  34365 tgtggt 34370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 80335 - 80242
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttact 117  Q
    |||||| |||||||| | ||||||||||| | |||||||||  ||||| ||||||||||||||  ||||| |||  ||||||||| |||||||||    
T  80335 tattttggtcatttttttagtaagggtaaattagtaattttt-ggtgatgattatttttagtgtatagtgagaaccattattttactaagttact 80242  T

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Target: scaffold0335 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 5097 - 5166
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| |||  ||||||||| |||||||||||| | ||||||||||||    
T  5097 ggtgagaattatttttaatgtttagtgagaaccattattttactaagttactagtatagtaattagtttt 5166  T

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Target: scaffold0146 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 32369 - 32330
Alignment:
Q  274 cacatgtaaaatacttaaatgccctcagcggtagttaact 313  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  32369 cacaagtaaaatacttaaatgcccccagcggtagttaact 32330  T

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Target: scaffold0521 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 11838 - 11784
Alignment:
Q  78 ttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||||||| |||||| |||  ||||||||| |||||||||||||| |||||||||    
T  11838 ttttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagt 11784  T

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Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 3964 - 3845
Alignment:
Q  14 ttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagt 113  Q
    |||||||| |||||| ||||||| |   ||||||||||    |||||||||  ||||| |||||||||| || ||||||  ||  ||||||||| |||||    
T  3964 ttagaatggtattttggtcatttagcgggtaagggtaaaatggtaatttta--gtgagaattatttttaatgtttagtgacaaccattattttactaagt 3867  T
Q  114 tactagtgtggtaattagtttt 135  Q
    ||||||| | ||||||||||||    
T  3866 tactagtatagtaattagtttt 3845  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 5085 - 5023
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    |||||| |||||| ||| || |||||||| | |||||||| || |||||||||||||||||||    
T  5085 tatttttgtcattgtgtgagcaagggtaaattagtaatttcactgtgaggattatttttagtg 5023  T

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Target: scaffold0205 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 8717 - 8643
Alignment:
Q  11 gtgttagaatgatattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    ||||||||| | |||||| |||||| ||| || |||||||| | |||||||| ||  ||||||||||||||||||    
T  8717 gtgttagaagggtattttggtcattgtgtgagcaagggtaaattagtaatttcaccatgaggattatttttagtg 8643  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 116048 - 116114
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||||| ||||||||||||| |||||| |||  ||||||||  |||||||||||| | |||||||||    
T  116048 ggtgagaattatttttagtgtttagtgagaaccattattttgctaagttactagtttagtaattagt 116114  T

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Target: scaffold0218 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 27033 - 26938
Alignment:
Q  44 aagggtaattaagtaattttacggtgaggattatttttagtgctt--agtgtgaattattattttattaagttactagtgtggtaattagttttgaa 138  Q
    |||||||||| |||||||| | |||||| | ||||||||||| ||  |||| |||| |||| |||| ||||||||||||||| ||| ||||| ||||    
T  27033 aagggtaatttagtaatttcatggtgagaactatttttagtgtttcaagtgagaatcatta-tttactaagttactagtgtgataaatagttgtgaa 26938  T

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Target: scaffold0173 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 5950 - 5881
Alignment:
Q  66 ggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagtttt 135  Q
    |||||| |||||||||| || |||||| |||   |||||||| |||||||||||||| || |||||||||    
T  5950 ggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttt 5881  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 11672 - 11564
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgt 122  Q
    |||||| ||||||||   ||||||||||| | |||||||||  ||||||||||||||||| || |||||| | |  ||||||||| ||||||| ||  ||    
T  11672 tattttggtcattttacgagtaagggtaaattagtaattttt-ggtgaggattatttttaatgtttagtgagtaccattattttactaagttaataaggt 11574  T
Q  123 ggtaattagt 132  Q
     |||||||||    
T  11573 agtaattagt 11564  T

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Target: scaffold0643 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 238 - 174
Alignment:
Q  68 tgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    |||| ||||||||||||| |||||| |||   |||||||| ||||||||||| || |||||||||    
T  238 tgagaattatttttagtgtttagtgagaaccgttattttactaagttactagggtagtaattagt 174  T

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Target: scaffold0260 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 10687 - 10659
Alignment:
Q  10 cgtgttagaatgatattttagtcattttg 38  Q
    |||||||||||||||||||||||||||||    
T  10687 cgtgttagaatgatattttagtcattttg 10659  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 12216 - 12260
Alignment:
Q  41 agtaagggtaattaagtaattttacggtgaggattatttttagtg 85  Q
    ||||||||||| | |||||||||| | ||||||||||||||||||    
T  12216 agtaagggtaaattagtaattttatgatgaggattatttttagtg 12260  T

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Target: scaffold0231; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 12326 - 12374
Alignment:
Q  142 gtaagtgatcgtcgttattatttt-accgttaagtgggtagaaacattt 189  Q
    ||||||||||||  |||||||||| ||||||||||| ||||||||||||    
T  12326 gtaagtgatcgttattattatttttaccgttaagtgagtagaaacattt 12374  T

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Target: scaffold0138 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 21922 - 21986
Alignment:
Q  68 tgaggattatttttagtgcttagtgtgaattattattttattaagttactagtgtggtaattagt 132  Q
    ||||||| |||||||||| |||| | |||  ||||||||| ||||||||||| || |||||||||    
T  21922 tgaggataatttttagtgtttagcgagaaccattattttactaagttactagagtagtaattagt 21986  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 89340 - 89420
Alignment:
Q  23 tattttagtcattttgtaagtaagggtaattaagtaattttacggtgaggattatttttagtgcttagtgtgaattattatttt 106  Q
    |||||| |||||||||| |||| |||||| | || ||||||  |||||||||||||||||||| |||||| |||  ||||||||    
T  89340 tattttggtcattttgtgagtacgggtaaattagaaatttt--ggtgaggattatttttagtg-ttagtgagaaccattatttt 89420  T

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