View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9832_low_14 (Length: 239)

Name: NF9832_low_14
Description: NF9832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9832_low_14
NF9832_low_14
[»] chr8 (38 HSPs)
chr8 (34-209)||(33852700-33852874)
chr8 (10-184)||(23565717-23565889)
chr8 (131-223)||(39863528-39863620)
chr8 (131-223)||(37746995-37747086)
chr8 (129-223)||(20166528-20166620)
chr8 (141-209)||(9263790-9263857)
chr8 (137-221)||(42355699-42355778)
chr8 (141-209)||(44629126-44629194)
chr8 (137-223)||(5690585-5690670)
chr8 (131-193)||(37746503-37746565)
chr8 (129-223)||(17924682-17924771)
chr8 (129-209)||(3416861-3416938)
chr8 (129-211)||(44445387-44445467)
chr8 (129-223)||(17925074-17925165)
chr8 (141-223)||(40450010-40450089)
chr8 (129-224)||(44444990-44445083)
chr8 (137-175)||(34055267-34055305)
chr8 (137-223)||(3177964-3178045)
chr8 (129-223)||(5691330-5691421)
chr8 (131-171)||(36469082-36469122)
chr8 (141-223)||(23564840-23564919)
chr8 (180-223)||(29119742-29119785)
chr8 (137-223)||(41392713-41392793)
chr8 (142-224)||(41450108-41450193)
chr8 (137-223)||(41575101-41575181)
chr8 (137-223)||(4488690-4488772)
chr8 (137-223)||(12764267-12764345)
chr8 (137-223)||(30728961-30729041)
chr8 (131-174)||(31819948-31819991)
chr8 (137-220)||(41543101-41543179)
chr8 (137-223)||(44868974-44869055)
chr8 (189-223)||(38714692-38714726)
chr8 (137-181)||(37261968-37262013)
chr8 (137-181)||(38256624-38256669)
chr8 (131-184)||(39864036-39864089)
chr8 (147-223)||(1143854-1143927)
chr8 (183-223)||(6653806-6653846)
chr8 (183-223)||(6734206-6734246)
[»] chr5 (54 HSPs)
chr5 (10-209)||(26243824-26244020)
chr5 (54-223)||(11277267-11277428)
chr5 (137-223)||(13545255-13545340)
chr5 (131-223)||(3307133-3307223)
chr5 (128-209)||(6809314-6809392)
chr5 (129-223)||(1143826-1143918)
chr5 (129-223)||(41210068-41210160)
chr5 (129-209)||(14197826-14197904)
chr5 (147-223)||(27341345-27341420)
chr5 (141-222)||(26242958-26243035)
chr5 (131-193)||(3306641-3306703)
chr5 (141-222)||(11157130-11157209)
chr5 (137-223)||(25751887-25751968)
chr5 (131-223)||(38978258-38978347)
chr5 (129-209)||(2301237-2301315)
chr5 (147-223)||(7951331-7951404)
chr5 (129-224)||(41085173-41085264)
chr5 (129-209)||(42546640-42546721)
chr5 (141-181)||(21086100-21086140)
chr5 (137-223)||(40988734-40988812)
chr5 (129-223)||(1144217-1144308)
chr5 (137-223)||(26394743-26394823)
chr5 (141-184)||(30971414-30971457)
chr5 (143-209)||(7950983-7951048)
chr5 (145-206)||(11276748-11276810)
chr5 (137-223)||(27500765-27500848)
chr5 (137-223)||(13968655-13968737)
chr5 (131-184)||(21360732-21360785)
chr5 (130-209)||(34217139-34217214)
chr5 (131-184)||(38977775-38977828)
chr5 (137-223)||(39047481-39047563)
chr5 (128-181)||(42273083-42273136)
chr5 (129-181)||(6834709-6834761)
chr5 (129-181)||(6835208-6835260)
chr5 (137-181)||(29835922-29835966)
chr5 (137-223)||(27188572-27188655)
chr5 (147-209)||(38424296-38424356)
chr5 (137-184)||(38424794-38424841)
chr5 (129-223)||(41084779-41084869)
chr5 (137-223)||(10623328-10623417)
chr5 (137-223)||(29235634-29235718)
chr5 (137-174)||(33159036-33159073)
chr5 (137-210)||(2745345-2745412)
chr5 (146-209)||(25455744-25455805)
chr5 (137-209)||(5380620-5380687)
chr5 (137-223)||(27341854-27341937)
chr5 (125-206)||(30972105-30972184)
chr5 (137-210)||(38090521-38090588)
chr5 (147-184)||(13544775-13544812)
chr5 (155-192)||(25456217-25456254)
chr5 (155-184)||(27188128-27188157)
chr5 (129-209)||(41209688-41209765)
chr5 (142-209)||(21362351-21362416)
chr5 (141-209)||(34217050-34217117)
[»] chr3 (40 HSPs)
chr3 (27-223)||(54800244-54800438)
chr3 (141-223)||(37332779-37332862)
chr3 (143-223)||(54801100-54801179)
chr3 (156-223)||(26034931-26034997)
chr3 (137-223)||(7580407-7580489)
chr3 (141-193)||(50314261-50314313)
chr3 (142-223)||(2445073-2445153)
chr3 (142-223)||(9103828-9103908)
chr3 (130-223)||(9667142-9667235)
chr3 (129-209)||(33128607-33128684)
chr3 (131-223)||(4584183-4584273)
chr3 (129-193)||(7580025-7580089)
chr3 (131-181)||(2444600-2444650)
chr3 (137-223)||(38667295-38667374)
chr3 (137-223)||(4070354-4070434)
chr3 (129-223)||(8014784-8014877)
chr3 (137-215)||(29492188-29492261)
chr3 (129-209)||(54493480-54493557)
chr3 (131-184)||(37116991-37117044)
chr3 (137-223)||(14899291-14899372)
chr3 (129-224)||(33129138-33129231)
chr3 (137-181)||(37089675-37089719)
chr3 (137-223)||(40278287-40278375)
chr3 (131-182)||(35296122-35296173)
chr3 (137-176)||(43914548-43914587)
chr3 (147-223)||(3021244-3021313)
chr3 (130-183)||(9665704-9665757)
chr3 (137-181)||(21414597-21414642)
chr3 (151-209)||(29588905-29588965)
chr3 (137-181)||(1587047-1587091)
chr3 (137-223)||(3937749-3937830)
chr3 (34-70)||(19840500-19840536)
chr3 (137-173)||(33236977-33237013)
chr3 (137-181)||(33778449-33778493)
chr3 (137-181)||(45970579-45970623)
chr3 (142-209)||(31890521-31890587)
chr3 (148-209)||(32536944-32537002)
chr3 (137-223)||(33981575-33981658)
chr3 (148-223)||(26839337-26839408)
chr3 (129-209)||(30835167-30835247)
[»] chr7 (48 HSPs)
chr7 (10-223)||(31309108-31309320)
chr7 (10-221)||(4287113-4287320)
chr7 (141-223)||(4288190-4288273)
chr7 (129-223)||(18829243-18829335)
chr7 (129-223)||(44388237-44388328)
chr7 (129-213)||(44472653-44472734)
chr7 (129-193)||(9495010-9495074)
chr7 (137-223)||(12231294-12231380)
chr7 (131-223)||(21124993-21125082)
chr7 (130-223)||(24212487-24212578)
chr7 (129-223)||(48610809-48610902)
chr7 (137-212)||(30023087-30023160)
chr7 (144-222)||(45259079-45259157)
chr7 (141-223)||(23678716-23678794)
chr7 (137-184)||(29644795-29644842)
chr7 (137-223)||(33210440-33210524)
chr7 (137-223)||(38184355-38184437)
chr7 (137-223)||(48343749-48343831)
chr7 (137-223)||(4236301-4236387)
chr7 (137-223)||(8296406-8296489)
chr7 (147-209)||(21387084-21387145)
chr7 (137-209)||(21386572-21386642)
chr7 (142-223)||(30163341-30163422)
chr7 (137-181)||(38450028-38450072)
chr7 (137-181)||(40259783-40259827)
chr7 (137-223)||(21366424-21366504)
chr7 (137-223)||(33696669-33696753)
chr7 (137-223)||(39767004-39767086)
chr7 (131-193)||(21125509-21125571)
chr7 (142-223)||(26244413-26244492)
chr7 (144-209)||(31308432-31308495)
chr7 (137-222)||(35668358-35668439)
chr7 (137-194)||(28293575-28293632)
chr7 (147-209)||(29644335-29644393)
chr7 (137-181)||(34345794-34345839)
chr7 (129-170)||(35498849-35498890)
chr7 (137-181)||(39880229-39880274)
chr7 (143-184)||(48611129-48611170)
chr7 (137-181)||(28295118-28295162)
chr7 (155-209)||(21366178-21366232)
chr7 (147-209)||(30022583-30022644)
chr7 (147-209)||(42491296-42491357)
chr7 (155-215)||(5211087-5211145)
chr7 (137-181)||(28312363-28312408)
chr7 (156-209)||(33227862-33227914)
chr7 (141-181)||(10546496-10546536)
chr7 (143-175)||(19557512-19557544)
chr7 (145-209)||(44157650-44157713)
[»] chr4 (68 HSPs)
chr4 (27-223)||(43420497-43420692)
chr4 (137-224)||(40220694-40220777)
chr4 (137-223)||(12594754-12594838)
chr4 (129-223)||(29860112-29860205)
chr4 (129-215)||(25705452-25705534)
chr4 (129-209)||(15739514-15739593)
chr4 (129-223)||(56279948-56280039)
chr4 (137-223)||(21858312-21858397)
chr4 (137-223)||(21914175-21914260)
chr4 (130-223)||(23161805-23161895)
chr4 (129-223)||(1861954-1862044)
chr4 (147-223)||(21857791-21857865)
chr4 (147-223)||(21913654-21913728)
chr4 (141-209)||(43419771-43419838)
chr4 (141-223)||(29860905-29860984)
chr4 (143-223)||(32465423-32465499)
chr4 (129-223)||(34732730-34732821)
chr4 (129-223)||(47308638-47308729)
chr4 (131-209)||(23161291-23161368)
chr4 (147-197)||(35194722-35194772)
chr4 (131-223)||(36870278-36870366)
chr4 (155-223)||(12595248-12595314)
chr4 (137-209)||(35194210-35194280)
chr4 (137-223)||(36927600-36927682)
chr4 (137-209)||(46614555-46614625)
chr4 (141-181)||(12213236-12213276)
chr4 (131-175)||(36870796-36870840)
chr4 (137-223)||(42341880-42341959)
chr4 (144-209)||(44097850-44097917)
chr4 (130-209)||(52177205-52177282)
chr4 (141-223)||(25705937-25706016)
chr4 (129-223)||(34733125-34733216)
chr4 (141-192)||(45765498-45765549)
chr4 (129-223)||(48800240-48800331)
chr4 (149-206)||(29797396-29797451)
chr4 (137-223)||(41904564-41904647)
chr4 (129-222)||(44098473-44098565)
chr4 (129-224)||(48799839-48799932)
chr4 (137-209)||(55496704-55496773)
chr4 (129-223)||(55497089-55497179)
chr4 (131-171)||(37687608-37687648)
chr4 (131-223)||(53139792-53139882)
chr4 (137-210)||(54444726-54444794)
chr4 (129-213)||(6644208-6644288)
chr4 (129-176)||(40146221-40146268)
chr4 (129-223)||(47309033-47309124)
chr4 (143-181)||(6507692-6507730)
chr4 (137-223)||(36076715-36076795)
chr4 (137-223)||(42987885-42987968)
chr4 (137-209)||(220666-220736)
chr4 (141-209)||(1861570-1861635)
chr4 (137-181)||(6450312-6450357)
chr4 (137-223)||(34017394-34017474)
chr4 (137-181)||(1565777-1565821)
chr4 (137-176)||(6644756-6644794)
chr4 (143-210)||(22072711-22072773)
chr4 (158-209)||(33615152-33615202)
chr4 (137-223)||(38392208-38392288)
chr4 (129-223)||(40145826-40145917)
chr4 (130-193)||(45764710-45764773)
chr4 (145-184)||(52176420-52176459)
chr4 (129-223)||(56280343-56280434)
chr4 (143-209)||(33617435-33617500)
chr4 (145-209)||(13097370-13097432)
chr4 (135-184)||(25490053-25490102)
chr4 (129-202)||(26171873-26171944)
chr4 (161-222)||(29342624-29342685)
chr4 (171-223)||(22525205-22525257)
[»] chr6 (14 HSPs)
chr6 (48-193)||(23597227-23597372)
chr6 (129-223)||(34658381-34658473)
chr6 (137-209)||(8590526-8590596)
chr6 (129-223)||(6138192-6138284)
chr6 (155-223)||(32155168-32155235)
chr6 (137-223)||(1798695-1798775)
chr6 (140-223)||(23598064-23598144)
chr6 (137-194)||(29212958-29213015)
chr6 (137-210)||(32597058-32597127)
chr6 (137-172)||(32154691-32154726)
chr6 (129-222)||(34657987-34658077)
chr6 (147-209)||(10624653-10624712)
chr6 (141-209)||(11957170-11957236)
chr6 (137-181)||(29723291-29723336)
[»] chr1 (58 HSPs)
chr1 (27-193)||(10613580-10613739)
chr1 (137-223)||(8742471-8742553)
chr1 (129-209)||(50643457-50643534)
chr1 (142-223)||(32814916-32814997)
chr1 (137-223)||(35392662-35392744)
chr1 (129-209)||(40116779-40116857)
chr1 (137-223)||(9034444-9034527)
chr1 (147-221)||(22388520-22388591)
chr1 (129-223)||(6783705-6783796)
chr1 (129-224)||(18611725-18611818)
chr1 (137-223)||(28296732-28296815)
chr1 (140-223)||(43215172-43215253)
chr1 (129-222)||(43759720-43759810)
chr1 (129-223)||(48803758-48803849)
chr1 (129-223)||(6783309-6783401)
chr1 (129-223)||(12770248-12770340)
chr1 (129-223)||(35155265-35155357)
chr1 (129-223)||(35155988-35156081)
chr1 (129-223)||(52870091-52870182)
chr1 (137-223)||(10373719-10373801)
chr1 (141-222)||(50642981-50643059)
chr1 (137-223)||(9680860-9680941)
chr1 (129-181)||(34557709-34557761)
chr1 (137-223)||(11707335-11707417)
chr1 (129-184)||(17826032-17826086)
chr1 (137-223)||(36723878-36723960)
chr1 (129-210)||(7288118-7288196)
chr1 (137-223)||(32536350-32536431)
chr1 (137-223)||(33740784-33740866)
chr1 (142-222)||(22389033-22389111)
chr1 (131-223)||(26615112-26615203)
chr1 (147-223)||(43214654-43214725)
chr1 (129-223)||(8897496-8897587)
chr1 (143-209)||(43281401-43281465)
chr1 (142-212)||(48721352-48721419)
chr1 (129-223)||(8897100-8897192)
chr1 (131-181)||(26615633-26615683)
chr1 (137-223)||(52580469-52580550)
chr1 (137-181)||(24482159-24482204)
chr1 (143-184)||(43281900-43281941)
chr1 (142-209)||(40116241-40116305)
chr1 (144-223)||(52869840-52869916)
chr1 (129-223)||(28297134-28297225)
chr1 (141-223)||(32186155-32186234)
chr1 (137-223)||(45217627-45217706)
chr1 (137-223)||(46584939-46585021)
chr1 (129-223)||(48720951-48721042)
chr1 (141-223)||(48803546-48803625)
chr1 (130-172)||(17826838-17826880)
chr1 (129-223)||(43760113-43760201)
chr1 (129-206)||(52870485-52870559)
chr1 (129-209)||(18611345-18611422)
chr1 (137-181)||(44156641-44156686)
chr1 (137-181)||(44432630-44432675)
chr1 (157-223)||(49216839-49216901)
chr1 (155-223)||(27134451-27134518)
chr1 (142-223)||(31050144-31050223)
chr1 (147-175)||(47985088-47985116)
[»] chr2 (44 HSPs)
chr2 (130-223)||(7338674-7338765)
chr2 (148-223)||(5606972-5607047)
chr2 (131-223)||(1091182-1091272)
chr2 (129-223)||(28637931-28638023)
chr2 (129-224)||(21540484-21540576)
chr2 (147-223)||(14252040-14252116)
chr2 (137-223)||(45159764-45159849)
chr2 (145-223)||(23849130-23849208)
chr2 (137-223)||(27482126-27482207)
chr2 (129-223)||(39500844-39500936)
chr2 (129-223)||(7275449-7275544)
chr2 (137-184)||(10316377-10316424)
chr2 (137-184)||(10317059-10317106)
chr2 (131-209)||(12139185-12139261)
chr2 (129-223)||(17815645-17815735)
chr2 (129-223)||(22064085-22064176)
chr2 (143-209)||(6730547-6730612)
chr2 (137-223)||(18060353-18060439)
chr2 (137-209)||(5607383-5607453)
chr2 (141-222)||(7532490-7532568)
chr2 (128-223)||(21545190-21545281)
chr2 (137-181)||(5438236-5438280)
chr2 (137-181)||(10316016-10316060)
chr2 (129-223)||(17816054-17816144)
chr2 (131-171)||(28780223-28780263)
chr2 (129-209)||(41425609-41425688)
chr2 (137-184)||(9758961-9759008)
chr2 (137-184)||(10315649-10315696)
chr2 (155-211)||(20207221-20207273)
chr2 (141-184)||(23849221-23849264)
chr2 (155-209)||(9758479-9758532)
chr2 (142-184)||(10316702-10316744)
chr2 (150-184)||(10317550-10317584)
chr2 (137-223)||(41726950-41727031)
chr2 (131-184)||(12138702-12138755)
chr2 (137-181)||(28637295-28637340)
chr2 (129-209)||(39500462-39500539)
chr2 (131-175)||(1090724-1090768)
chr2 (131-171)||(6924248-6924288)
chr2 (137-210)||(28587004-28587075)
chr2 (137-223)||(29365979-29366060)
chr2 (137-223)||(43207029-43207112)
chr2 (129-223)||(22064480-22064571)
chr2 (178-223)||(3106330-3106375)
[»] scaffold0445 (2 HSPs)
scaffold0445 (129-223)||(13410-13500)
scaffold0445 (129-223)||(13016-13107)
[»] scaffold0060 (3 HSPs)
scaffold0060 (129-223)||(66768-66860)
scaffold0060 (129-209)||(67163-67240)
scaffold0060 (159-223)||(46688-46754)
[»] scaffold0140 (1 HSPs)
scaffold0140 (137-223)||(4552-4638)
[»] scaffold0096 (2 HSPs)
scaffold0096 (141-194)||(27115-27168)
scaffold0096 (145-223)||(34901-34977)
[»] scaffold0031 (2 HSPs)
scaffold0031 (129-223)||(94823-94913)
scaffold0031 (129-223)||(94427-94517)
[»] scaffold0063 (1 HSPs)
scaffold0063 (129-209)||(34088-34165)
[»] scaffold1063 (1 HSPs)
scaffold1063 (129-213)||(832-914)
[»] scaffold0672 (1 HSPs)
scaffold0672 (137-223)||(6149-6233)
[»] scaffold0474 (1 HSPs)
scaffold0474 (137-175)||(12351-12389)
[»] scaffold0004 (3 HSPs)
scaffold0004 (137-220)||(131066-131147)
scaffold0004 (129-183)||(38035-38089)
scaffold0004 (142-170)||(37906-37934)
[»] scaffold0015 (1 HSPs)
scaffold0015 (137-223)||(42347-42430)
[»] scaffold0214 (1 HSPs)
scaffold0214 (137-223)||(16448-16531)


Alignment Details
Target: chr8 (Bit Score: 144; Significance: 8e-76; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 209
Target Start/End: Original strand, 33852700 - 33852874
Alignment:
Q  34 tattcagtttcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtgcagattctaaaagattttcattaa 133  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  33852700 tatttagtatcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtggagattctaaaacattttcattaa 33852799  T
Q  134 agctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    || ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33852800 agttaactgttaattgtttgtctttaatatcttttgagtcaagtataagaagaa-aaaaatataaattttcaagtt 33852874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 23565717 - 23565889
Alignment:
Q  10 aagcataggcgcaaaataaacaattattcagtttcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtg 109  Q
    ||||||||| ||| || |||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||   |||||||||||    
T  23565717 aagcataggtgcagaagaaacaactattcagtttcaaacataatctaaagggacaatcaaatagtccatataatatagatgaagaat--agtatcaagtg 23565814  T
Q  110 cagattctaaaagattttcattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
     ||||||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  23565815 gagattctaaaagattttcattaaggctaaccgttaattgtttgcctttaatatcttttgagtcaagtataagaa 23565889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 39863620 - 39863528
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || | | ||||||||||| ||||| |||||||||||||    
T  39863620 taaagctaattgttaattgtttgtctttaatatcatttgagtcaaggataagaaaaaaatatatataaattttaaagttcgggaggcattttg 39863528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 37746995 - 37747086
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||||||| ||||| ||| |||||||||    
T  37746995 taaagctaatcgttaattgtttgtctttaatatcatttgagtcaaggataagaa-aaaaaaaatataaattttaaagttcggggggcattttg 37747086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 20166528 - 20166620
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| |||||||||    
T  20166528 attaaagttaatttttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttggggggcattttg 20166620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 9263790 - 9263857
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  9263790 tgttaattgtttgtctttaatatcttttgaatcaaatataagaa-aaaaaaaatataaattttcaagtt 9263857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 42355778 - 42355699
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattt 221  Q
    |||||||||||||||||||||||||||||||||||||||| |||     || |||||||||||||||||||||| || |||||||    
T  42355778 taattgttaattgtttgtctttaatatcttttgagtcaaggata-----aaaaaaaatataaattttcaagtttagggggcattt 42355699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 44629194 - 44629126
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||| | |||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  44629194 tgttaattgtttatttttaatatcttttgagtcaagtataagaaagaaaaaaatataaattttcaagtt 44629126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 5690670 - 5690585
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||| ||||||||||| |||||||||||| ||| |||||||||| ||| ||||||||||| ||||| || ||||||||||    
T  5690670 taattgttaatcgtttgtctttagtatcttttgagtaaaggataagaagaa-aaatatataaatttttaagttcggaaggcattttg 5690585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 37746565 - 37746503
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  37746565 taaagctaaatgttaattgtttggctttaatatcttttgagtcaaatacaagaagaagaaaaa 37746503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 17924771 - 17924682
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| |||||||    ||||| ||||||||| ||||||||| |||||||||    
T  17924771 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataagaa----aaaaacataaatttttaagtttggggggcattttg 17924682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 3416938 - 3416861
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| |||  ||||||||||||||||||||||||||||||| || |||   ||||| |||||||||||||||||||||    
T  3416938 attaaagttaaccgttaattgtttgtctttaatatcttttgagttaaatat---aagaaaaaaaatataaattttcaagtt 3416861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 44445387 - 44445467
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttg 211  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| |||||||    
T  44445387 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttg 44445467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 17925074 - 17925165
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||| ||||||||| ||||||| ||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  17925074 attaaagttaactgttaattgtttgtgtttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaagttcggggggcattttg 17925165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 40450089 - 40450010
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||| ||||| ||||||  || ||| |||||| |||| ||||||||| |||||||||    
T  40450089 tgttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaacatataagtttttaagtttggggggcattttg 40450010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 44445083 - 44444990
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttgt 224  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||| || ||| |||||||||||||| || ||| ||||||||||    
T  44445083 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataagaa-aaaaaatatataaattttcaaattcggggggcattttgt 44444990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 34055305 - 34055267
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaa 175  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34055305 taattgttaattgtttgtctttaatatcttttgagtcaa 34055267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 3178045 - 3177964
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||      || |||||||||||||||||||||| || |||||||||    
T  3178045 taattgttaatttgtttgcctttaatatcttttgagtcaaggat------aaaaaaaatataaattttcaagtttagggggcattttg 3177964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 5691330 - 5691421
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||| || ||| |||||||||||||||||||||||   || ||||| |||| |||||||||||||||||  | |||||||||    
T  5691330 attaaagttaactgttagttatttatctttaatatcttttgagtcaag---aataagaaaaaaattataaattttcaagtttcagcggcattttg 5691421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 36469122 - 36469082
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgag 171  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  36469122 taaagctaattgttaattgtttgtctttaatatcatttgag 36469082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 23564919 - 23564840
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||| |||||||||||||||||| ||||||||||  || |||| | |||||||||||||| |||  ||||||||    
T  23564919 tgttaattgtttggctttaatatcttttgagt-aagtataaga--aaaaaaagtgtaaattttcaagttcggggtgcattttg 23564840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 29119742 - 29119785
Alignment:
Q  180 aagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  29119742 aagaagaaaaaaaatataaatttttaagtttgggaggcattttg 29119785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 41392793 - 41392713
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||  ||||||||||||||||||||| ||      || |||||||||||||||||| ||| || |||||||||    
T  41392793 taattgttaattgtttgcatttaatatcttttgagtcaaggat------aaaaaaaatataaattttcaaatttagggggcattttg 41392713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 41450193 - 41450108
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaa---aaatataaattttcaagtttgggaggcattttgt 224  Q
    |||||||||||| |||||||||||||||| ||||| ||||||| || ||   | ||||||||||||||||| ||  ||||||||||    
T  41450193 gttaattgtttgcctttaatatcttttgaatcaagaataagaaaaaaaatatatatataaattttcaagttcggagggcattttgt 41450108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 41575181 - 41575101
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||  ||||||||||||||||| ||| ||      || |||||||||||||||||||||| || |||||||||    
T  41575181 taattgttaattgtttgcttttaatatcttttgagtgaaggat------aaaaaaaatataaattttcaagtttagggggcattttg 41575101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 4488690 - 4488772
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||    || | |||||||||||||||| ||| || ||| |||||    
T  4488690 taattattaattgtttgcctttaatatcttttgagtcaaggataa----aaaataaatataaattttcaaatttagggggcgttttg 4488772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 12764345 - 12764267
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||| |||||         |||| |||||||||||||||||||||| || |||||||||    
T  12764345 taattgttaattgtttgcctttaatatcttttaagtca--------gagaaaaaaaatataaattttcaagtttagggggcattttg 12764267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 30728961 - 30729041
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||| || || ||      || |||||||||||||||||||||| |  |||||||||    
T  30728961 taattgttaattgtttgcctttaatatcttttgaatctaggat------aaaaaaaatataaattttcaagtttagtgggcattttg 30729041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 31819991 - 31819948
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtca 174  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  31819991 taaagctaaatgttaattgcttgcctttaatatcttttgagtca 31819948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 41543101 - 41543179
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatt 220  Q
    ||||||||||||||| || |||||||| |||||||| ||| |||| |||     |||||||||||||||||||| || ||||||    
T  41543101 taattgttaattgttcgtatttaatattttttgagttaaggataaaaag-----aaatataaattttcaagtttagggggcatt 41543179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 44868974 - 44869055
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||     || ||||||||||||||| |||||| || |||||||||    
T  44868974 taattgttaatttgtttgcctttaatatcttttgagtcaaggata-----aaaaaaaatataaatttttaagtttagg-ggcattttg 44869055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 38714692 - 38714726
Alignment:
Q  189 aaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||||||| |||||||||||||    
T  38714692 aaaaatataaattttcaagttcgggaggcattttg 38714726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 37262013 - 37261968
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    
T  37262013 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa 37261968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 38256669 - 38256624
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    
T  38256669 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa 38256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 39864036 - 39864089
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||||| || |||||    
T  39864036 taaaactaaatgttaattgcttgcctttaatatcttttgagtcaaatacaagaa 39864089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 1143854 - 1143927
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaa-ttttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||||||||||| |||| ||||    || ||||||||||| |||| |||||| || |||||||||    
T  1143854 ttgtttgtctttaatatcttttgagccaaggataa----aaaaaaaatataaatttttaaagtttagggggcattttg 1143927  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 6653806 - 6653846
Alignment:
Q  183 aagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| ||||||||||||||||||||| || ||||||||||    
T  6653806 aagaaaaaaaatataaattttcaagttcggaaggcattttg 6653846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 6734206 - 6734246
Alignment:
Q  183 aagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| ||||||||||||||||||||| || ||||||||||    
T  6734206 aagaaaaaaaatataaattttcaagttcggaaggcattttg 6734246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 26243824 - 26244020
Alignment:
Q  10 aagcataggcgcaaaataaacaattattcagtttcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtg 109  Q
    ||||||||| ||| || |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26243824 aagcataggtgcagaagaaacaactattcaatttcaaacataatctaaagggataaccaaatagtccatataacatagatgaagaaccaagtatcaagtg 26243923  T
Q  110 cagattctaaaagattttcattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||   ||||| |||||||| ||||||||||||    
T  26243924 gagattctaaaagattttcattaaagctaattgttaattgtttgcctttaagatcttttgagtaaagtat---aagaaaaaaaatatcaattttcaagtt 26244020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 11277267 - 11277428
Alignment:
Q  54 ctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtgcagattctaaaagattttcattaaagctaattgttaattgtttg 153  Q
    |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  11277267 ctaaagggacaaccaaatagtccatataacatagatgaagattcaaatatcaagtggagattctaaaagattttcattaaagctaaccgttaattgtttg 11277366  T
Q  154 tctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
     ||||||||||||||||||        |  |||| ||||||||||||||||||||||||  |||||||||    
T  11277367 cctttaatatcttttgagt--------atgagaaaaaaaatataaattttcaagtttggagggcattttg 11277428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 13545255 - 13545340
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| || | | ||||||||||||||||| |||||||||||||    
T  13545255 taattgttaattgtttgtctttaatatcttttgagtcaaggataagaa-aaaatatatataaattttcaagttcgggaggcattttg 13545340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 3307133 - 3307223
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||  || ||| ||||||||||| ||||| ||| |||||||||    
T  3307133 taaagctaattgttaattgtttgtctttaatatcatttgagtcaagaataaga--aaaaaatatataaattttaaagttcggggggcattttg 3307223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 6809314 - 6809392
Alignment:
Q  128 cattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||   ||||| |||||||||||||||||||||    
T  6809314 cattaaagcttactgttaattgtttatctttaatatcttttgagtcaagtat---aagaaaaaaaatataaattttcaagtt 6809392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 1143918 - 1143826
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| |||||||||    
T  1143918 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttggggggcattttg 1143826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 41210068 - 41210160
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| |||||||||    
T  41210068 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttggggggcattttg 41210160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 14197826 - 14197904
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||  ||| |||||||||||||||||||||    
T  14197826 attaaaactaactgttaattgtttgcctttaatattttttgagtcaagtataag--gaaaaaaaatataaattttcaagtt 14197904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 27341420 - 27341345
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||| ||  |||||||||    
T  27341420 ttgtttgtctttaatatcttttgagtcaagtataagaagaa-aaatatacaaatttttaagttcggagggcattttg 27341345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 26243035 - 26242958
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    |||| |||||||||||||||||||||||||||||||||||   |||| ||||||||||||||| ||||| ||| ||||||||    
T  26243035 tgttcattgtttgtctttaatatcttttgagtcaagtata---agaaaaaaaatataaatttttaagttcggg-ggcatttt 26242958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 3306703 - 3306641
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||| || ||||||||||||||    
T  3306703 taaagctaaatgttaattgcttgcctttaatatcttttgagtcaaatacaagaagaagaaaaa 3306641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 11157209 - 11157130
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    |||||||||| ||  |||||||||||||||||||| |||||||  || |||||||| ||||||| |||||||||||||||||    
T  11157209 tgttaattgtctgcttttaatatcttttgagtcaaatataaga--aaaaaaaatatgaattttcgagtttgggaggcatttt 11157130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 25751968 - 25751887
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| |||     |||| |||||||||||||||||||| || | |||||||    
T  25751968 taattgttaattgtttgcctttaatatcttttgagtcaaggata-----aagacaaatataaattttcaagtttaggggacattttg 25751887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 38978258 - 38978347
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    | | ||| ||| ||||||||||| ||||| ||| |||||||||    
T  38978258 taaagctaattgttaattgtttgtctttaatatcatttgagtcaag---gacaggaaaaaatatataaattttaaagttcggggggcattttg 38978347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 2301237 - 2301315
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||| ||||||||||||| | ||||||||||  ||||||| |||||||| || | |||||||||||||||||||    
T  2301237 attaaagctaactgttaattgtttgccattaatatctt--gagtcaaatataagaaaaaaataaatataaattttcaagtt 2301315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 7951331 - 7951404
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  7951331 ttgtttgtctttaatatcttttgagtcaaggataaga--aaaaaatatataaattttcaagttcggg-ggcattttg 7951404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 41085173 - 41085264
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttgt 224  Q
    ||||||| ||||||||||||| |||||||||||||  ||||||| ||| ||||||  ||  || ||||||||||||||||||||| ||||||||||    
T  41085173 attaaagttaattgttaattgcttgtctttaatat--tttgagttaaggataagacaaa--aatatataaattttcaagtttggggggcattttgt 41085264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 42546721 - 42546640
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataag-aagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||||| |||||| || || || ||||||||||||||||||    
T  42546721 attaaaggtaactgttaattgtttgtttttaatattttttgagtcaaatataagcaaaaaaaataatataaattttcaagtt 42546640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 21086100 - 21086140
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21086100 tgttaattgtttgtctttaatatcttttgagtcaagtataa 21086140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 40988734 - 40988812
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||       ||||||||||||||||||||||||| |||||||||    
T  40988734 taattgttaattgtttgcttttaatatcttttgagtcaaggataa-------aaaaatataaattttcaagtttggg-ggcattttg 40988812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 1144217 - 1144308
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  1144217 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaagttcggggggcattttg 1144308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 26394743 - 26394823
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| ||      || ||||||||||||||||||||||  | |||||||||    
T  26394743 taattgttaattgtttgcctttaatatcttttgagtcaaggat------aaaaaaaatataaattttcaagtttatggggcattttg 26394823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 30971457 - 30971414
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  30971457 tgttaattgtttgtctttaatatcttttgagttaagtataagaa 30971414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 7951048 - 7950983
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||| ||||||||||||||||||||| ||||||||| || | | |||||||||||||||||    
T  7951048 ttaattgtttctctttaatatcttttgagtcaggtataagaa-aaaatatatataaattttcaagtt 7950983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 11276810 - 11276748
Alignment:
Q  145 aattgtttgtctttaatatcttttgagtcaagtataagaagaagaa-aaatataaattttcaa 206  Q
    ||||||||| |||||||||||||||||||||||||||||| || || | ||||||||||||||    
T  11276810 aattgtttgcctttaatatcttttgagtcaagtataagaaaaaaaatatatataaattttcaa 11276748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 27500765 - 27500848
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    || ||| |||||||||||||||||| || |||||||||    
T  27500765 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa----aaaaaatatataaattttcaagtttagggggcattttg 27500848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 13968655 - 13968737
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||    || ||| |||||||||||||||||| || |||| ||||    
T  13968655 taattgttaattgtttgcctttaatatcttttgagtcaaagataa----aaaaaatatataaattttcaagtttagggggcaatttg 13968737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 21360785 - 21360732
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  21360785 taaagttaagtgttaattgtttgcctttaatatcttttgagtcaggtataagaa 21360732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 34217139 - 34217214
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||| ||||||||| ||| |||||||||||||||||| ||||||   ||||| ||||||||||||||| |||||    
T  34217139 ttaaagctaactgttaattggttgcctttaatatcttttgagt-aagtat---aagaaaaaaaatataaatttttaagtt 34217214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 38977828 - 38977775
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| || |||||    
T  38977828 taaagctaaatgttaattgtttgtgtttaatatcttttgagtcaaatacaagaa 38977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 39047563 - 39047481
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||    || ||| |||||||||||||||||  || |||||||||    
T  39047563 taattgttaattgtttgcctttaatatcttttgggtcaaggataa----aaaaaatatataaattttcaagttgagggggcattttg 39047481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 42273136 - 42273083
Alignment:
Q  128 cattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||    
T  42273136 cattaaagctaactgttagttgtttgcctttaatatcttttgagtcaaggataa 42273083  T

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Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 6834761 - 6834709
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||    
T  6834761 attaaagttaactgttaattgtttgcctttaatatattttgagtcaagtataa 6834709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 6835208 - 6835260
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  6835208 attaaagttaattgttaattgtttgcctttaatatcttttgagttaaggataa 6835260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 29835922 - 29835966
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  29835922 taattgttaattgtttgcctttaatatcttttgagtcaaggataa 29835966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 27188572 - 27188655
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||| |  ||||||||||||| ||||||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  27188572 taattgttaattgttcgcatttaatatcttttaagtcaaggataaga--aaaaaatatataaattttcaagttcggg-ggcattttg 27188655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 38424356 - 38424296
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| |||| ||||||||||||||||||||||||  || ||||||||||||||| |||||    
T  38424356 ttgtttgcctttgatatcttttgagtcaagtataaga--aaaaaaaatataaatttttaagtt 38424296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 38424794 - 38424841
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||    
T  38424794 taattgttaattgtttgcctttaatatcttttgagtcaatgataagaa 38424841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 41084869 - 41084779
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||| | ||||| ||||||| || ||||| ||  ||||| ||||||||| |||||||||    
T  41084869 attaaagttaactgttaattgtttgtctttaatatcttttaaatcaag-ataagaaaaaaaaaaacat--atttttaagtttggg-ggcattttg 41084779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 10623328 - 10623417
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaag--tataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| ||||||||||||||||||||||  || || || || | | |||||||||||||||||| || |||||||||    
T  10623328 taattgttaatttgtttgcctttaatatcttttgagtcaaggataaaaaaaaaatatatatataaattttcaagtttagggggcattttg 10623417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 29235718 - 29235634
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| ||||||||| |||||||| ||| |||| || ||   |||||||||||||||||||| || |||||||||    
T  29235718 taattgttaatttgtttgcctttaatattttttgagtgaaggataaaaaaaa---aaatataaattttcaagtttagggggcattttg 29235634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 33159073 - 33159036
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtca 174  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33159073 taattgttaattgtttgcctttaatatcttttgagtca 33159036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 2745345 - 2745412
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagttt 210  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||       ||||||||||||||||||||||    
T  2745345 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa-------aaaaatataaattttcaagttt 2745412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 25455805 - 25455744
Alignment:
Q  146 attgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||| ||| |||||||||||||||||| ||||||  || ||| |||||||||||||||||    
T  25455805 attgtttgccttaaatatcttttgagtcaaggataaga--aaaaaatatataaattttcaagtt 25455744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 5380687 - 5380620
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||      || |||||||||||||||||||||    
T  5380687 taattgttaatttgtttgcctttaatatcttttgagtcaaggat------aaaaaaaatataaattttcaagtt 5380620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 27341854 - 27341937
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatat-aaattttcaagtttgggaggcattttg 223  Q
    |||||| |||||||||| ||||||||||| |||||||||  |||||||    |||||||| ||| ||||||||| ||| |||||||||    
T  27341854 taattgctaattgtttgcctttaatatctgttgagtcaaagataagaa----aaaaatataaaaatttcaagttcggggggcattttg 27341937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 30972105 - 30972184
Alignment:
Q  125 tttcattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaa 206  Q
    ||||||||||| ||| || ||||| |||   |||||||||||  |||| |||||||||||| | ||||||||||||||||||    
T  30972105 tttcattaaagttaaatgataattatttacttttaatatctt--gagtgaagtataagaagtaaaaaaatataaattttcaa 30972184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 38090588 - 38090521
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagttt 210  Q
    ||||| ||||||||||| |||||||||||||||| ||||| ||      || ||||||||||||||||||||||    
T  38090588 taattattaattgtttgcctttaatatcttttgaatcaaggat------aaaaaaaatataaattttcaagttt 38090521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 13544812 - 13544775
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  13544812 ttgtttgcctttaatatcttttgagtaaagtataagaa 13544775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 25456217 - 25456254
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaagaagaaaa 192  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  25456217 ctttaatatcttttgagtcaattataagaagaaaaaaa 25456254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 184
Target Start/End: Complemental strand, 27188157 - 27188128
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||||||||||||||||||||||||    
T  27188157 ctttaatatcttttgagtcaagtataagaa 27188128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 41209765 - 41209688
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||  ||  || |||||||||||||||||    
T  41209765 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataaga--aaataatatataaattttcaagtt 41209688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 21362351 - 21362416
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||| |||||| |||| |||| |||||||||||| ||||||  || ||| |||||||||||||||||    
T  21362351 gttaactgtttgcctttgatatattttgagtcaaggataaga--aaaaaatatataaattttcaagtt 21362416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 34217117 - 34217050
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||| ||||||||| ||||||| |||  ||||||| || | | |||||||||||||||||    
T  34217117 tgttaattgtttgcctttaatatattttgagccaatgataagaa-aaaatatatataaattttcaagtt 34217050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 54800438 - 54800244
Alignment:
Q  27 aaacaattattcagtttcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtgcagattctaaaagattt 126  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  54800438 aaacaactattcagtttcaaacataatctaaagggacaaccaaatagtccatataatatagatgaagaactaagtatcaagtggagattctaaaagattt 54800339  T
Q  127 tcattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttc-aagtttgggaggcattttg 223  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||   |||| |||||||||||||||| ||||| ||| |||||||||    
T  54800338 tcattaaagctaaatgttaattgtttgcctttaatattttttgagtcaagtata---agaaaaaaaatataaattttcaaagttcggggggcattttg 54800244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 37332862 - 37332779
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaaga-aaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||    
T  37332862 tgttaattgtttgtctttaatatcttttgagtcaaatataagaagaagaaaaaatataaattttcaagttcggaaggcattttg 37332779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 54801100 - 54801179
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||| |||||| |||||||||| ||| |||||||||    
T  54801100 ttaattgtttgtctttaatatcttttgagtcaagtataagaa-aaaaaatatataatttttcaagttcgggtggcattttg 54801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 26034931 - 26034997
Alignment:
Q  156 tttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  26034931 tttaatatcttttgagtcaagtataagaagaaaaaaaatataaatttttaagtttggg-ggcattttg 26034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 7580407 - 7580489
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||   ||||| ||||||||||||||||||||||||| |||||||||    
T  7580407 taattgttaattgcttgtctttaatatcttttgagttaaggat---aagaaaaaaaatataaattttcaagtttggg-ggcattttg 7580489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 50314261 - 50314313
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50314261 tgttaattgtttgcctttaatatcttttgagtcaagtataagaagaagaaaaa 50314313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 2445073 - 2445153
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||||||||||||||||||||  ||||||| || | | ||||||||||||||||| |||| ||||||||    
T  2445073 gttaattgtttgtctttaatatcttttgagtcaatgataagaa-aaaatatatataaattttcaagttagggaagcattttg 2445153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 9103828 - 9103908
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| |||||||||    
T  9103828 gttaattgtttctctttaatatcttttgaatcaag-ataagaaaaaaaaacatataaatttttaagtttggggggcattttg 9103908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 9667142 - 9667235
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaa--atataaattttcaagtttgggaggcattttg 223  Q
    |||||| ||||||||||||||||| ||||||||||  |||||||||| |||||||||| ||||  ||||||||||||||||  ||| |||||||||    
T  9667142 ttaaagttaattgttaattgtttgcctttaatatc--ttgagtcaaggataagaagaaaaaaaatatataaattttcaagtccggggggcattttg 9667235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 33128684 - 33128607
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||  ||| ||| |||||||||||||||||    
T  33128684 attaaagttaactgttaattgtttgtctttaatatcttttgagtcaaatataag--gaa-aaatatataaattttcaagtt 33128607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 4584273 - 4584183
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| || ||||||    
T  4584273 taaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttggggggaattttg 4584183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 7580089 - 7580025
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
    ||||||| |||  ||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  7580089 attaaagataaccgttaactgtttgtctttaatatcttttgagtcaaggataagaagaagaaaaa 7580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 2444650 - 2444600
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  2444650 taaagctaactgttaattgtttgcctttaatatcttttgagtcaagtataa 2444600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 38667374 - 38667295
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||||       |||||||||||||||||||||| || |||||||||    
T  38667374 taattgttaattgtttgcctttaatatctttcgagtcaaggataa-------aaaaatataaattttcaagtttagggggcattttg 38667295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 4070354 - 4070434
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| ||      || |||||||||||||||||||||| || || ||||||    
T  4070354 taattgttaattgtttgcctttaatatcttttgagtcaaggat------aaaaaaaatataaattttcaagtttagggggtattttg 4070434  T

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Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 8014877 - 8014784
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||| ||||| ||||| ||||||||||||||||  ||||||| || | | ||||||||||| ||||||||| |||||||||    
T  8014877 attaaagttaactgttaactgtttatctttgatatcttttgagtcaataataagaa-aaaatatatataaatttttaagtttggggggcattttg 8014784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 29492261 - 29492188
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggag 215  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||     || ||||||||||||||||||||| |||||    
T  29492261 taattgttaattgtttgcctttaatatcttttgaatcaaggata-----aaaaaaaatataaattttcaagttagggag 29492188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 54493480 - 54493557
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||| ||||||||||||| ||||||||| |||||||||||| ||   ||||| ||||||||||||||| |||||    
T  54493480 attaaagttaaatgttaattgtttgcctttaatatattttgagtcaaggat---aagaaaaaaaatataaatttttaagtt 54493557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 37116991 - 37117044
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||    
T  37116991 taaagctaaatgttaattgtttgtctttaatatcatttaagtcaaggataagaa 37117044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 14899291 - 14899372
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||      || |||||||||||||||||||||| || |||||||||    
T  14899291 taattgttaatttgtttgcctttaatatcttttgagtcaagcat------aaaaaaaatataaattttcaagtttagggggcattttg 14899372  T

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Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 33129138 - 33129231
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttgt 224  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||| ||| |||| |  || ||| ||||||||||| |||||| || | ||||||||    
T  33129138 attaaagttaattattaattgtttgtctttaatattttttgagttaaggataata--aaaaaatatataaatttttaagttttggggccattttgt 33129231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 37089719 - 37089675
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  37089719 taattgttaattgtttgcctttaatatcttttgagtcaaggataa 37089675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 40278375 - 40278287
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaa-atataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||| || ||  | | |||||||||||||||||| || |||||||||    
T  40278375 taattgttaatttgtttgcctttaatatcttttgagtcaaggataaaaaaaaatatatatataaattttcaagtttagggggcattttg 40278287  T

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Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 35296173 - 35296122
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataag 182  Q
    |||| |||| ||||||||||||||||||||||| |||||||| |||||||||    
T  35296173 taaaactaactgttaattgtttgtctttaatatattttgagttaagtataag 35296122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 43914548 - 43914587
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaag 176  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  43914548 taattgttaattgtttgcctttaatatcttttgagtcaag 43914587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 3021313 - 3021244
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||| ||||       ||||||||||||||| |||||| || |||||||||    
T  3021313 ttgtttgtctttaatatcttttgagtcaaggataa-------aaaaatataaatttttaagtttagggggcattttg 3021244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 9665757 - 9665704
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataaga 183  Q
    |||||| ||||||||||| |||||  ||||||||||||||||||||| ||||||    
T  9665757 ttaaagttaattgttaatggtttgcttttaatatcttttgagtcaaggataaga 9665704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 21414597 - 21414642
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  21414597 taattgttaatttgtttgtctttaatatcttttgagtcaaggataa 21414642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 29588905 - 29588965
Alignment:
Q  151 ttgtctttaatatcttttgagtcaagtataagaag--aagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||||||||| |||  ||||||||  || |||||||||||||||||||||    
T  29588905 ttgtctttaatatcttttgagacaacgataagaagaaaataaaaatataaattttcaagtt 29588965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 1587091 - 1587047
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||    
T  1587091 taattgttaattgtttgcctttaatattttttgagtcaaggataa 1587047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 3937830 - 3937749
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||      || |||||||||| ||||||||||| || |||||||||    
T  3937830 taattgttaatttgtttgcctttaatatcttttgagtcaagcat------aaaaaaaatataatttttcaagtttagggggcattttg 3937749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 19840536 - 19840500
Alignment:
Q  34 tattcagtttcaaacataatctaaagggacaaccaaa 70  Q
    |||||| ||||||||||||||||||||||||||||||    
T  19840536 tattcattttcaaacataatctaaagggacaaccaaa 19840500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 33237013 - 33236977
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtc 173  Q
    ||||||||||||||||| |||||||||||||||||||    
T  33237013 taattgttaattgtttgcctttaatatcttttgagtc 33236977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 33778449 - 33778493
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||||    
T  33778449 taattgttaattgtttgcctttaatatctttcgagtcaaggataa 33778493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 45970579 - 45970623
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||    
T  45970579 taattgttaattgtttgcctttaatattttttgagtcaaggataa 45970623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 31890587 - 31890521
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||  |||||||||||||||||| ||| ||||||| || | | |||||||||||||||||    
T  31890587 gttaattgtttacctttaatatcttttgagttaaggataagaa-aaaatatatataaattttcaagtt 31890521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 32537002 - 32536944
Alignment:
Q  148 tgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||| |||||||||||||||||||||  ||   ||||| |||||||||||||||||||||    
T  32537002 tgtttgcctttaatatcttttgagtcaaagat---aagaaaaaaaatataaattttcaagtt 32536944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 33981658 - 33981575
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    || ||| ||||| |||||||||||| || | |||||||    
T  33981658 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa----aaaaaatatatatattttcaagtttaggggacattttg 33981575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 26839408 - 26839337
Alignment:
Q  148 tgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| ||||||| ||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  26839408 tgtttgtctttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaagttcggg-ggcattttg 26839337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 30835247 - 30835167
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||| | ||||||||||||||||| |||||||||| | ||  ||||||| || | | ||||||||||| |||||    
T  30835247 attaaagttaactcttaattgtttgtctttagtatcttttgaattaaagataagaaaaaaatatatataaattttaaagtt 30835167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 31309108 - 31309320
Alignment:
Q  10 aagcataggcgcaaaataaacaattattcagtttcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtg 109  Q
    ||||||||| ||| || ||||||  ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31309108 aagcataggtgcagaagaaacaacaattcaatttcaaacataatctaaagagacaaccaaatagtccatataacatagatgaagaagcaagtatcaagtg 31309207  T
Q  110 cagattctaaaagattttcattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
     |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||| || | | ||||||||||| |||||    
T  31309208 gagattctaaaagattttcattaaaactaactgttaattgtttgcctttaatatcttttgagtcgagtataagaa-aaaatatatataaatttttaagtt 31309306  T
Q  210 tgggaggcattttg 223  Q
     ||| |||||||||    
T  31309307 cggggggcattttg 31309320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 4287320 - 4287113
Alignment:
Q  10 aagcataggcgcaaaataaacaattattcagtttcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtg 109  Q
    ||||||||| ||| || |||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  4287320 aagcataggtgcagaagaaacaactattcagtttcaaatataatctaaaggaacaaccaaatagtccatataacatagatgaagaaccaa-tatcaagtg 4287222  T
Q  110 cagattctaaaagattttcattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
     | ||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| |||   ||||| ||| |||||||||||||||||    
T  4287221 gatattctaaaagattttcattaaagctaactgttaagtgtttgcctttaatatcttttgagtcaactat---aagaaaaaatatataaattttcaagtt 4287125  T
Q  210 tgggaggcattt 221  Q
     ||| |||||||    
T  4287124 cggggggcattt 4287113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 4288190 - 4288273
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaag-aagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||| || |||||||||||||||||| || |||||||||||||    
T  4288190 tgttaattgtttgcctttaaaatcttttgagtcaagcataagaagaaaaaaaaatataaattttcaatttcgggaggcattttg 4288273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 18829335 - 18829243
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||  || ||| ||||| ||||||||||| |||||||||||||    
T  18829335 attaaagttaactgttaattgtttgtctttaatattttttgagtcaaatataaga--aaaaaatatatatattttcaagttcgggaggcattttg 18829243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 44388237 - 44388328
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||  || ||||||||||||||| ||||||||| |||||||||    
T  44388237 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaaaatataaatttttaagtttggggggcattttg 44388328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 44472653 - 44472734
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttggg 213  Q
    ||||||| ||| |||||||||||||||||||| || |||||||||||||||   ||||| |||||||||||||||||||||||||    
T  44472653 attaaagttaactgttaattgtttgtctttaaaatattttgagtcaagtat---aagaaaaaaaatataaattttcaagtttggg 44472734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 9495074 - 9495010
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||    
T  9495074 attaaagctaattgttaattgtttgcctttaatatcttttgagtaaagtataagaaaaaaaaaaa 9495010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 12231380 - 12231294
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagttt-gggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| || || || ||||||||||||||||||| ||| |||||||||    
T  12231380 taattgttaattgtttgcctttaatatcttttgagtcaaggataa-aaaaaaaataatataaattttcaagtttaggggggcattttg 12231294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 21125082 - 21124993
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||   ||||| ||| ||||||||||| ||||| ||| |||||||||    
T  21125082 taaagttaattgttaattgtttgtctttaatatcatttgagtcaaggat---aagaaaaaatatataaattttaaagttcggggggcattttg 21124993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 24212578 - 24212487
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||||||  || ||| ||||||||||||| ||| ||  |||||||||    
T  24212578 ttaaagctaacggttaattgtttgcctttaatatcttttgagtcaagtataaga--aaaaaatatataaattttcatgttcggagggcattttg 24212487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 48610902 - 48610809
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||||  |||||||||||||||||||||||||||||| ||| ||||||| || ||| ||||||||||||||||| |||  ||||||||    
T  48610902 attaaagttaatcattaattgtttgtctttaatatcttttgagttaaggataagaa-aaaaaatatataaattttcaagttcgggttgcattttg 48610809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 30023087 - 30023160
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgg 212  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||  || ||| ||||||||||| ||||||||    
T  30023087 taattgttaattgtttgtctttaatatcttttgagtcaatgataaga--aaaaaatatataaatttttaagtttgg 30023160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 45259157 - 45259079
Alignment:
Q  144 taattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaa-atataaattttcaagtttgggaggcatttt 222  Q
    ||||||||||||||||||||||||||| ||||| ||||||| || |||| ||||||||||| ||||||||| ||||||||    
T  45259157 taattgtttgtctttaatatcttttgaatcaag-ataagaaaaaaaaaacatataaatttttaagtttggggggcatttt 45259079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 23678716 - 23678794
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||| |||||||||| |||||||| |||||||    || ||||||||||||||||||||| ||| |||||||||    
T  23678716 tgttaattgtttgcctttaatatcatttgagtcgagtataa----aaaaaaaatataaattttcaagttcggggggcattttg 23678794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 29644795 - 29644842
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  29644795 taattgttaattgtttggctttaatatcttttgagtcaaggataagaa 29644842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 33210524 - 33210440
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| ||  | | | |||||||||||||||||| || | |||||||    
T  33210524 taattgttaattgtttgcctttaatatcttttgagtcaaggataaaaa--atatatatataaattttcaagtttaggggacattttg 33210440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 38184437 - 38184355
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||     || |||||||||||||||||||||| || |||||||||    
T  38184437 taattgttaatttgtttgcctttaatatcttttgagtcaaggata-----aaaaaaaatataaattttcaagtttagggggcattttg 38184355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 48343831 - 48343749
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||     || |||||||||||||||||||||| || |||||||||    
T  48343831 taattgttaatttgtttgcctttaatatcttttgagtcaaggata-----aaaaaaaatataaattttcaagtttagggggcattttg 48343749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 4236387 - 4236301
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||| | ||||||||||||| ||||||| ||||||| || | | ||| ||||||||||||||  | |||||||||    
T  4236387 taattgttaattgtttatttttaatatcttttaagtcaaggataagaaaaaaatatataaaaattttcaagtttatggggcattttg 4236301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 8296489 - 8296406
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    || ||||||||||||||| |||||| || |||||||||    
T  8296489 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa----aaaaaaaatataaatttttaagtttagggggcattttg 8296406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 21387084 - 21387145
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  21387084 ttgtttgcctttaatatcttttgagtcaagtataagaa-aaaaaatatataaatttttaagtt 21387145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 21386642 - 21386572
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||  || ||| ||||||||||| |||||    
T  21386642 taattgttaattgtttacctttaatatcttttgagtcaaggataaga--aaaaaatatataaatttttaagtt 21386572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 30163341 - 30163422
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| ||||| | ||||||||||||||||||||  |||||||||| ||| ||||||||||| |||||| || || ||||||    
T  30163341 gttaaatgtttatttttaatatcttttgagtcaaagataagaagaaaaaatatataaatttttaagtttagggggtattttg 30163422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 38450072 - 38450028
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  38450072 taattgttaattgtttgcctttaatatcttttgagtcaaggataa 38450028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 40259827 - 40259783
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  40259827 taattgttaattgtttgcctttaatatcttttgagtcaaggataa 40259783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 21366504 - 21366424
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||  ||||||||||||||| ||||| ||      || |||||||||||||||||||||| || |||||||||    
T  21366504 taattgttaattgtttgcttttaatatcttttgaatcaaggat------aaaaaaaatataaattttcaagtttagggggcattttg 21366424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 33696753 - 33696669
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||| | |||  || || | | ||||||||||||||||| |||  ||||||||    
T  33696753 taattgttaattgtttgcctttaatatcttttgagtcatggata--aaaaaaatatatataaattttcaagttcggggagcattttg 33696669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 39767086 - 39767004
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||| |||     |||||||||||||||||||| || || ||||||    
T  39767086 taattgttaatttgtttgtctttaatatcttttaagtcaaggataaaaag-----aaatataaattttcaagtttagggggtattttg 39767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 21125509 - 21125571
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||| || ||||| || |||||    
T  21125509 taaagctaaatgttaattgcttgcctttaatatcttttgagtcaaatacaagaaaaaaaaaaa 21125571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 26244413 - 26244492
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| |||| | ||||||||||||||||| |||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  26244413 gttaagtgttagcctttaatatcttttgagacaaggataaga--aaaaaatatataaattttcaagttcggggggcattttg 26244492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 31308495 - 31308432
Alignment:
Q  144 taattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||  |||||||||||||| ||||||||||||  | | |||||||||||||||||||||    
T  31308495 taattgtttgcttttaatatcttttgtgtcaagtataag--ggaaaaaaatataaattttcaagtt 31308432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 35668358 - 35668439
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||     || ||||||||||||||| |||||| || ||||||||    
T  35668358 taattgttaatttgtttgcctttaatatcttttgagtcaagcata-----aaaaaaaatataaatttttaagtttagggggcatttt 35668439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 28293632 - 28293575
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaat 194  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||| || || ||||||    
T  28293632 taattgtcaattgtttgcctttaatatcttttgagtcaaggataaaaaaaaaaaaaat 28293575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 29644393 - 29644335
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||| |||||    
T  29644393 ttgtttgcctttaatattttttgagtcaagtataagaa----aaaaatataaatttttaagtt 29644335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 34345794 - 34345839
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  34345794 taattgttaatttgtttgtctttaatatcttttgagtcaaggataa 34345839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 35498890 - 35498849
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttga 170  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  35498890 attaaagttaactgttaattgtttgtctttaatatcttttga 35498849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 39880274 - 39880229
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  39880274 taattgttaatttgtttgtctttaatatcttttgagtcaaggataa 39880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 48611129 - 48611170
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  48611129 ttaattgtttatctttaatatcttttgagtcaagaataagaa 48611170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 28295118 - 28295162
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||    
T  28295118 taattgttaattgtttgcttttaatatcttttgagtcaagaataa 28295162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 21366232 - 21366178
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||| ||||||| ||||||||||||||||| || ||| ||||||||||| |||||    
T  21366232 ctttgatatcttatgagtcaagtataagaaaaaaaaatatataaatttttaagtt 21366178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 30022644 - 30022583
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||  ||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||    
T  30022644 ttgtttgcatttaatatcttttgagtcaagtataagaa-aaaaaatatataaaattttaagtt 30022583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 42491296 - 42491357
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| |||||||||||||||| ||||||||||| | || ||| ||||||||||| |||||    
T  42491296 ttgtttgcctttaatatcttttgaatcaagtataagga-aaaaaatatataaatttttaagtt 42491357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 5211087 - 5211145
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggag 215  Q
    ||||||||||||||||  |||| ||||||| ||  |||||||||||||| |||||||||||    
T  5211087 ctttaatatcttttgatacaaggataagaaaaa--aaaatataaatttttaagtttgggag 5211145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 28312363 - 28312408
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||    
T  28312363 taattgttaatttgtttgtctttaatatcttttaagtcaaggataa 28312408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 33227914 - 33227862
Alignment:
Q  156 tttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||| ||||||||| ||| || ||| |||||||||||||||||    
T  33227914 tttaatatcttttgaatcaagtatatgaa-aaaaaatatataaattttcaagtt 33227862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 10546496 - 10546536
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||||||||| || ||||||||| ||||    
T  10546496 tgttaattgtttgtctttaatatattatgagtcaaggataa 10546536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 19557544 - 19557512
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaa 175  Q
    |||||||||| ||||||||||||||||||||||    
T  19557544 ttaattgtttttctttaatatcttttgagtcaa 19557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 44157713 - 44157650
Alignment:
Q  145 aattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||| || ||||||||||||||||||  ||||||| || | | |||||||||||||||||    
T  44157713 aattgtttgcctataatatcttttgagtcaatgataagaa-aaaatatatataaattttcaagtt 44157650  T

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Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 43420497 - 43420692
Alignment:
Q  27 aaacaattattcagtttcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtgcagattctaaaagattt 126  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  43420497 aaacaactattcaatttcaaacataatctaaagagacaaccaaatagtccatataacatagatgaagaaccaaatatcaagtagagattctaaaagattt 43420596  T
Q  127 tcattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaa-atataaattttcaagtttgggaggcattttg 223  Q
    |||||||||| || |||||||||||||  |||||||||  ||||||||||||||||||||| |||| ||||||||||||||||| |||  ||||||||    
T  43420597 tcattaaagccaaatgttaattgtttgcttttaatatc--ttgagtcaagtataagaagaaaaaaatatataaattttcaagttcggggagcattttg 43420692  T

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Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 40220694 - 40220777
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttgt 224  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||||||| ||| | ||||||||    
T  40220694 taattgttaattgtttgcctttaatatcttttgagtcaagtataagaa----aaaaatataaattttcaagttcgggggacattttgt 40220777  T

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Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 12594838 - 12594754
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||  || ||||||||||||||||||||| ||| |||||||||    
T  12594838 taattgttaattgtctgcctttaatatcttttgagtcaaggataaga--aaaaaaaatataaattttcaagttcggggggcattttg 12594754  T

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Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 29860205 - 29860112
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||| | |||||||||||  ||||||||||||||||||||||||||||| || ||| ||||||||||||||||| | || ||||||||    
T  29860205 attaaagctaactattaattgtttgcatttaatatcttttgagtcaagtataagaa-aaaaaatatataaattttcaagttcgagatgcattttg 29860112  T

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Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 25705534 - 25705452
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggag 215  Q
    ||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||    ||||||||||||||||||||| |||||    
T  25705534 attaaagttaactgttaattgtctgtctttgatatcttttgagtcaagtataagaa----aaaaatataaattttcaagttcgggag 25705452  T

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Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 15739514 - 15739593
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| || | | |||||||||||||||||    
T  15739514 attaaagctaactgttaattgtttgcctttaatattttttgagtcaagtataagaa-aaaatatatataaattttcaagtt 15739593  T

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Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 56280039 - 56279948
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||  || ||| ||||||||||| ||||||||| |||||||||    
T  56280039 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaacatataaatttttaagtttggggggcattttg 56279948  T

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Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 21858312 - 21858397
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||| ||||||| |||||||||||||||||||||  ||||||| || ||| |||||||||||||||||||||  ||||||||    
T  21858312 taattgttagttgtttgcctttaatatcttttgagtcaaagataagaa-aaaaaatatataaattttcaagtttggggtgcattttg 21858397  T

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Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 21914175 - 21914260
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||| ||||||| |||||||||||||||||||||  ||||||| || ||| |||||||||||||||||||||  ||||||||    
T  21914175 taattgttagttgtttgcctttaatatcttttgagtcaaagataagaa-aaaaaatatataaattttcaagtttggggtgcattttg 21914260  T

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Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 23161805 - 23161895
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||  || ||| ||||||||||| ||||| ||| |||||||||    
T  23161805 ttaaaactaattgttaattgtttgtctttaatatcatttgagtcaaggataaga--aaaaaatatataaattttaaagttcggg-ggcattttg 23161895  T

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Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 1861954 - 1862044
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||    | ||||| ||||| ||||||||| ||||||||| |||||||||    
T  1861954 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag----ataagaaaaaaaacataaatttttaagtttggggggcattttg 1862044  T

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Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 21857865 - 21857791
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||||||||||||||||||||||||||||  || ||||||||||||||| ||||| ||| |||||||||    
T  21857865 ttgtttgcctttaatatcttttgagtcaagtataaga--aaaaaaaatataaatttttaagttcggggggcattttg 21857791  T

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Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 21913728 - 21913654
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||||||||||||||||||||||||||||  || ||||||||||||||| ||||| ||| |||||||||    
T  21913728 ttgtttgcctttaatatcttttgagtcaagtataaga--aaaaaaaatataaatttttaagttcggggggcattttg 21913654  T

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Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 43419838 - 43419771
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||||| |||||    
T  43419838 tgttaattgtttgcctttaatatcttttgagtcaagtataagaa-aaaaaatatataaattttaaagtt 43419771  T

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Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 29860905 - 29860984
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||| ||  || ||||||||||||||||| |||||||||||||    
T  29860905 tgttaattgtttg-ctttaatatcttttgagtcaaggatacgaaaaa--aacatataaattttcaagttcgggaggcattttg 29860984  T

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Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 32465423 - 32465499
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    ||| ||||||||||||||||| ||| |||||||||    
T  32465423 ttaattgtttgcctttaatgtcttttgagtcaagtataagaa----aaatatataaattttcaagttcggggggcattttg 32465499  T

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Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 34732821 - 34732730
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||  || ||| ||||||||||| || |||||| |||||||||    
T  34732821 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaacatataaatttttaactttggggggcattttg 34732730  T

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Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 47308729 - 47308638
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| |||  || || ||| ||||||||||| ||||||||| |||||||||    
T  47308729 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ata--aaaaaaaaacatataaatttttaagtttggggggcattttg 47308638  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 23161368 - 23161291
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| || ||||| || ||||||| ||| |||||||||    
T  23161368 taaagctaaatgttaattgtttgcctttaatatcttttgagtcaaatacaagaa-aaaaaaaataaaaaatttcaagtt 23161291  T

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Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 35194722 - 35194772
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatata 197  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  35194722 ttgtttgcctttaatatcttttgagtcaagtataagaagaaaaaaaatata 35194772  T

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Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 36870366 - 36870278
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||| |||||||||   || | ||||| ||| ||||||||||| ||||| ||| |||||||||    
T  36870366 taaagctaattgttaattgtttgtctttaatatcatttgagtca---atgataagaaaaaatatataaattttaaagttcggg-ggcattttg 36870278  T

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Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 12595248 - 12595314
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||| ||||| ||| |||||||||    
T  12595248 ctttaatatcttttgagtcaagtataaga--aaaaaaaatataaatttttaagttcggggggcattttg 12595314  T

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Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 35194280 - 35194210
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||||  || ||| |||||||||||||||||    
T  35194280 taattgttaattgtttgcctttaatatattttgagtcaaggataaga--aaaaaatatataaattttcaagtt 35194210  T

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Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 36927682 - 36927600
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    || |||||||||||||||||| |||  | |||||||||    
T  36927682 taattgttaattgtttgcctttaatatcttttgagtcaaggataa----aaaaaaaatataaattttcaaatttatggggcattttg 36927600  T

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Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 46614555 - 46614625
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||  || ||| |||||||||||||||||    
T  46614555 taattgttaattgtttgtctttaatatcttttaagccaattataaga--aaaaaatatataaattttcaagtt 46614625  T

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Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 12213236 - 12213276
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12213236 tgttaattgtttgtctttaatatcttttgagtcaagtataa 12213276  T

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Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 36870796 - 36870840
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaa 175  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  36870796 taaagctaaatgttaattgtttgtctttaatatcttttgagtcaa 36870840  T

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Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 42341959 - 42341880
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||       |||||||||||||||||||||| || || ||||||    
T  42341959 taattgttaattgtttgcctttaatatcttttgagtcaaggataa-------aaaaatataaattttcaagtttagggggtattttg 42341880  T

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Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 44097917 - 44097850
Alignment:
Q  144 taattgtttgtctttaatatcttttgagtcaagtataagaag--aagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||||||||||||||||| ||| ||||||||  || ||||||| |||||||||||||    
T  44097917 taattgtttgtctttaatatcttttgagttaagaataagaagaaaaaaaaaatacaaattttcaagtt 44097850  T

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Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 52177205 - 52177282
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||| || |||| ||||  |||||||||||||||||||||||||||||  || || ||||||||||||||||||    
T  52177205 ttaaagctaactgctaatagttttcctttaatatcttttgagtcaagtataaga--aaaaataatataaattttcaagtt 52177282  T

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Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 25705937 - 25706016
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||| |||||||||||||||||||||| ||||||  ||  || ||||||||||||||||| ||||| |||||||    
T  25705937 tgttaattgtttg-ctttaatatcttttgagtcaaggataaga--aaacaacatataaattttcaagttcgggagacattttg 25706016  T

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Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 34733125 - 34733216
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  34733125 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaagttcggggggcattttg 34733216  T

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Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 45765498 - 45765549
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaa 192  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  45765498 tgttaattgtttgtctttgatatctttagagtcaagtataagaaaaagaaaa 45765549  T

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Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 48800240 - 48800331
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||  ||||||||||||||||||||||||||||| ||||| ||||||  || ||| ||||||||||| |||||||||  ||||||||    
T  48800240 attaaagttaaccgttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaatatataaatttttaagtttggggagcattttg 48800331  T

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Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 29797451 - 29797396
Alignment:
Q  149 gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaa 206  Q
    |||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||    
T  29797451 gtttgtctttaatat--tttgagtcaagcataagaagaaaaaaaatataaattttcaa 29797396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 41904564 - 41904647
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    || ||| |||||||||||||||||| || |||||||||    
T  41904564 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa----aaaaaatatataaattttcaagtttagggggcattttg 41904647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 44098473 - 44098565
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    ||||||| |||  ||||||||| ||||||||||||||||||||| ||| ||||||| || | | ||||||||||| ||||||||| | ||||||    
T  44098473 attaaagttaaccgttaattgtgtgtctttaatatcttttgagttaaggataagaa-aaaatatatataaatttttaagtttgggggacatttt 44098565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 48799932 - 48799839
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaa-atataaattttcaagtttgggaggcattttgt 224  Q
    ||||||| ||| ||||||||| |||| |||||||||||| |||| ||| ||||  |||| |||| ||||||||||||||||| ||||||||||||||    
T  48799932 attaaagttaagtgttaattgcttgtatttaatatcttt-gagttaaggataa--agaaaaaaatatataaattttcaagttcgggaggcattttgt 48799839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 55496773 - 55496704
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||| |||||||||||||| ||||||| ||| ||||||  || |||||||||||||||||||||    
T  55496773 taattgttaattgcttgtctttaatatc-tttgagttaaggataaga--aaaaaaaatataaattttcaagtt 55496704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 55497089 - 55497179
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| || ||||| ||||||||||||||||||||| |||||    | ||||| ||||| ||||||||| ||||||||| |||||||||    
T  55497089 attaaagttaactgataattatttgtctttaatatcttttgaatcaag----ataagaaaaaaaacataaatttttaagtttggggggcattttg 55497179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 37687608 - 37687648
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgag 171  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  37687608 taaagctaattgttaattgtttgtctttaatatcatttgag 37687648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 53139792 - 53139882
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||  ||||||| || ||| |||| |||||| ||||| ||| |||||||||    
T  53139792 taaaggtaattgttaattgtctgtctttaatatcatttgagtcaatgataagaa-aaaaaatatatcaatttt-aagttcggggggcattttg 53139882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 54444794 - 54444726
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagttt 210  Q
    ||||||||||||||||| |||||||||||||||||||||  || ||||    ||||||||||||||||||||||    
T  54444794 taattgttaattgtttgcctttaatatcttttgagtcaatgat-agaa----aaaaatataaattttcaagttt 54444726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 6644288 - 6644208
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttggg 213  Q
    ||||||||||| |||||||| ||||  |||||||| ||||||| |||| ||| |||    |||||||||||||||||||||||||    
T  6644288 attaaagctaactgttaattatttgcttttaatatattttgagccaagcataggaa----aaaaatataaattttcaagtttggg 6644208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 40146221 - 40146268
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaag 176  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  40146221 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag 40146268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 47309033 - 47309124
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||| |||||||||||||| | ||||| ||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  47309033 attaaagttaactgttaattgcttgtctttaatatc-tctgagttaaggataaga--aaaaaatatataaattttcaagttcggggggcattttg 47309124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 181
Target Start/End: Complemental strand, 6507730 - 6507692
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  6507730 ttaattgtttgtctttaatatattttgagtcaagtataa 6507692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 36076795 - 36076715
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||  |||    |||||||||||||| |||||| || |||||||||    
T  36076795 taattgttaattgtttgcctttaatatattttgagtcaaggata--aag----aaaatataaatttttaagtttagggggcattttg 36076715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 42987885 - 42987968
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    || ||| ||||||||||||||||||  | |||||||||    
T  42987885 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa----aaaaaatatataaattttcaagtttacggggcattttg 42987968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 220666 - 220736
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||||| |||||||||||||| ||||||  ||||||  || ||| |||||| ||||||||||    
T  220666 taattgttaattgtttgcctttaatatcttttaagtcaatgataaga--aaaaaatatataatttttcaagtt 220736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 1861635 - 1861570
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||  || ||| |||||||||||||||||    
T  1861635 tgttaattgtttgtctttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaagtt 1861570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 6450357 - 6450312
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  6450357 taattgttaatttgtttgtctttaatatcttttgagtcaaggataa 6450312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 34017394 - 34017474
Alignment:
Q  137 taattgttaat-tgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||| |||||| |||||||||||||||||||||| ||||       ||||||||||||||| |||||| || |||||||||    
T  34017394 taattgttaatgtgtttgcctttaatatcttttgagtcaagcataa-------aaaaatataaatttttaagtttagggggcattttg 34017474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 1565777 - 1565821
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||    
T  1565777 taattgttaattgtttgcctttaatattttttgagtcaaggataa 1565821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 6644756 - 6644794
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaag 176  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  6644756 taattgttaattgtttg-ctttaatatcttttgagtcaag 6644794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 22072711 - 22072773
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagttt 210  Q
    |||| ||||||  ||||||||||||||||||||||||||||     ||||||||||||||| ||||||    
T  22072711 ttaaatgtttgcttttaatatcttttgagtcaagtataaga-----aaaaatataaatttttaagttt 22072773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 33615202 - 33615152
Alignment:
Q  158 taatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||| ||| |||||||||| ||||||||||| |||||||||    
T  33615202 taatatcttttgagttaaggataagaagaa-aaaaatataaaatttcaagtt 33615152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 38392288 - 38392208
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||| || || ||      || |||||||||||||||||||||| || | |||||||    
T  38392288 taattgttaattgtttgcctttaatatcttttgaatctaggat------aaaaaaaatataaattttcaagtttaggggccattttg 38392208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 40145917 - 40145826
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||  ||||||||||||||||||||||| ||||||| ||| ||||||  ||  || ||||||||||||||||| ||| | |||||||    
T  40145917 attaaagttaacagttaattgtttgtctttaatatc-tttgagttaaggataaga--aaataatatataaattttcaagttcgggggacattttg 40145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 45764773 - 45764710
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
    |||||| ||| ||||||| ||||  ||||||||| |||||||||||| |||||||||| |||||    
T  45764773 ttaaagttaactgttaatcgtttacctttaatattttttgagtcaaggataagaagaaaaaaaa 45764710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 52176459 - 52176420
Alignment:
Q  145 aattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  52176459 aattgtttgtcttaaatatcttttgagtcaaggataagaa 52176420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 56280343 - 56280434
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||| ||| |||||||||||||| ||||||| ||| ||||||  || ||| ||||||||||||||||| |||  ||||||||    
T  56280343 attaaagttaactgttagttgcttgtctttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaagttcggggagcattttg 56280434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 33617435 - 33617500
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||||||||||||| |||||||  ||||||| || | | ||||||||||| |||||    
T  33617435 ttaattgtttgtctttaatatctttcgagtcaatgataagaa-aaaatatatataaatttttaagtt 33617500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 13097432 - 13097370
Alignment:
Q  145 aattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||| ||||||||| |||||||| ||| ||||||| ||  || |||||||||||||||||    
T  13097432 aattgtttgcctttaatatattttgagttaaggataagaaaaa--aatatataaattttcaagtt 13097370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 25490053 - 25490102
Alignment:
Q  135 gctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||| ||| ||||||||| ||||||||||||||||||||| || |||||    
T  25490053 gctaaatgtgaattgtttgcctttaatatcttttgagtcaaatacaagaa 25490102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 26171944 - 26171873
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattt 202  Q
    ||||||| ||| |||||||| |||||||||||||||||| || ||||| ||||||| || |||||| |||||||    
T  26171944 attaaagttaactgttaattctttgtctttaatatctttcgaatcaag-ataagaa-aaaaaaaatttaaattt 26171873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 29342685 - 29342624
Alignment:
Q  161 tatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    ||||||||  || ||| ||||||| || ||||||||||||||| ||||||||||| ||||||    
T  29342685 tatcttttatgttaaggataagaaaaaaaaaaatataaatttttaagtttgggagacatttt 29342624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 22525205 - 22525257
Alignment:
Q  171 gtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||| ||||||| || |||| |||||||||||||||| ||| |||||||||    
T  22525205 gtcaaggataagaaaaaaaaaattataaattttcaagttcggggggcattttg 22525257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 23597372 - 23597227
Alignment:
Q  48 cataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtgcagattctaaaagattttcattaaagctaattgttaat 147  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||  ||||||||||||||||||||||||||||   ||||||    
T  23597372 cataatttaaagggacaatcaaatagtccatatagcatagatgaagaacaaagtataaagtagagattctaaaagattttcattaaagctaccagttaat 23597273  T
Q  148 tgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23597272 tgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 23597227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 34658381 - 34658473
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| |||||||||    
T  34658381 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaatatataaatttttaagtttggggggcattttg 34658473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 8590526 - 8590596
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||  || ||| |||||||||||||||||    
T  8590526 taattgttaattgtttgtctttaatatcttttaagtcaaggataaga--aaaaaatatataaattttcaagtt 8590596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 6138192 - 6138284
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||   | ||||||||||||||| |||||   |||||||||||    
T  6138192 attaaagttaattattaattgtttgtctttaatattttttgagtcaaggataaga--taaaaaaatataaatttttaagttcatgaggcattttg 6138284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 32155168 - 32155235
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||| ||| |||||||||    
T  32155168 ctttaatatcttttgagtcaagtataagaagaa-aaatatacaaatttttaagttcggggggcattttg 32155235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 1798775 - 1798695
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| ||      || ||||||||||||||| |||||| || |||||||||    
T  1798775 taattgttaattgtttgcctttaatatcttttgagtcaaggat------aaaaaaaatataaatttttaagtttagggggcattttg 1798695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 23598064 - 23598144
Alignment:
Q  140 ttgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||| |||  |||||||||||||||||||||||||   | ||| ||||||||||||||||||||| ||  |||||||||    
T  23598064 ttgttaattattttcctttaatatcttttgagtcaagtat---acgaaaaaaaatataaattttcaagttcggagggcattttg 23598144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 29213015 - 29212958
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaat 194  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| || || ||||||    
T  29213015 taattgttaattgtttgcctttaatatcttttgagtcaaggataaaaaaaaaaaaaat 29212958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 32597058 - 32597127
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagttt 210  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||    || ||| ||||||||||||||||||    
T  32597058 taattgttaattgtttgcctttaatatcttttgagttaaggataa----aaaaaatatataaattttcaagttt 32597127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 32154726 - 32154691
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagt 172  Q
    ||||||||||||||||||||||||||||||||||||    
T  32154726 taattgttaattgtttgtctttaatatcttttgagt 32154691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 34658077 - 34657987
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||  || | | ||||||||||||||||| ||| ||||||||    
T  34658077 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataaga--aaaatatatataaattttcaagttcggggggcatttt 34657987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 10624712 - 10624653
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| || |||||||||||||||||||||||   |||| ||||||||||||||| |||||    
T  10624712 ttgtttgcctgtaatatcttttgagtcaagtata---agaaaaaaaatataaatttttaagtt 10624653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 11957236 - 11957170
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||| || |||||||||||||||||| | | ||||||  || ||||||||||||||| |||||    
T  11957236 tgttaattgtctgcctttaatatcttttgagttatggataaga--aaaaaaaatataaattttgaagtt 11957170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 29723336 - 29723291
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||    
T  29723336 taattgttaatttgtttgtctttaatatcttttgagacaaggataa 29723291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 3e-50; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 10613580 - 10613739
Alignment:
Q  27 aaacaattattcagtttcaaacataatctaaagggacaaccaaatagtccatataacatagatgaagaaccaagtatcaagtgcagattctaaaagattt 126  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||||||       |||||| || ||||||||||||| ||||||||||||||||    
T  10613580 aaacaactattcagtttcaaatataatctaaaggaacaaccaaatagtccata-------gatgaaaaatcaagtatcaagtggagattctaaaagattt 10613672  T
Q  127 tcattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaa 193  Q
     |||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  10613673 ccattaaagctaactgttcattgtttgcctttaatatcttttgagtcaagtataagaagaagaaaaa 10613739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 8742471 - 8742553
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    || ||| |||||||||||||||||| || |||||||||    
T  8742471 taattgttaattgtttgtctttaatatcttttgagtcaaggataa----aaaaaatatataaattttcaagtttagggggcattttg 8742553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 50643457 - 50643534
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| ||||||   ||||| |||||||||||||||||||||    
T  50643457 attaaagctaactgttaattgtttacctttaatatcttttgagtgaagtat---aagaaaaaaaatataaattttcaagtt 50643534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 32814916 - 32814997
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||| | |||||||||||||||| ||||| ||||| | || ||||||||||||||||||||| ||| |||||||||    
T  32814916 gttaattgttcgcctttaatatcttttgaatcaaggataaggaaaaaaaaaatataaattttcaagttcggggggcattttg 32814997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 35392744 - 35392662
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    || ||| |||||||||||||||||| || |||||||||    
T  35392744 taattgttaattgtttgcctttaatatcttttgagtcaaggataa----aaaaaatatataaattttcaagtttagggggcattttg 35392662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 40116779 - 40116857
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||| || |||||||| || |||||||||||||||||||||||||||||  || ||| |||||||||||||||||    
T  40116779 attaaagctactttttaattgtgtgcctttaatatcttttgagtcaagtataaga--aaaaaatatataaattttcaagtt 40116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 9034444 - 9034527
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||  |||||||||||||| ||||||| ||   ||||| |||||||||||||||||||||| || |||||||||    
T  9034444 taattgttaattgttttcctttaatatcttttaagtcaaggat---aagaaaaaaaatataaattttcaagtttagggggcattttg 9034527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 22388591 - 22388520
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattt 221  Q
    ||||||||||||||||||||||||||||||||||   |||| ||||||||||||||| ||||| |||| ||||||    
T  22388591 ttgtttgtctttaatatcttttgagtcaagtata---agaaaaaaaatataaatttttaagttcgggaagcattt 22388520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 6783705 - 6783796
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||  || ||| ||||||||||| ||||||||| || ||||||    
T  6783705 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaacatataaatttttaagtttggggggtattttg 6783796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 18611725 - 18611818
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttgt 224  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||| | ||||||||||    
T  18611725 attaaagttaactgttaattgtttgtccttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttgaggggcattttgt 18611818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 28296815 - 28296732
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||  || ||||| ||||||||| ||||||||  |||||||||    
T  28296815 taattgttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaaaacataaatttttaagtttggagggcattttg 28296732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 43215172 - 43215253
Alignment:
Q  140 ttgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||| ||| || ||||||||||| ||||||||| |||||||||    
T  43215172 ttgttaattgtttgcctttaatatcttttaagtcaaggataagaa-aag-aatatataaatttttaagtttggggggcattttg 43215253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 43759810 - 43759720
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||   ||   ||||| ||| ||||||||||| ||||||||| ||||||||    
T  43759810 attaaagataatcgttaattgtttgtctttaatatcttttgagtca---atgctaagaaaaaacatataaatttttaagtttggggggcatttt 43759720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 48803758 - 48803849
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||||||||||| |||||||||||| ||||| ||||||  || ||| ||||||||||| ||||||||| |||||||||    
T  48803758 attaaagttaactgttaattgtttgtcttcaatatcttttgaatcaag-ataaga--aaaaaacatataaatttttaagtttggggggcattttg 48803849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 6783401 - 6783309
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||| || ||| ||||||||||||||||| ||| |||||||||    
T  6783401 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataagaa-aaaaaatatataaattttcaagttcggggggcattttg 6783309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 12770340 - 12770248
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||||||||||||||||| |||||| ||||| ||||||| || ||| ||||||||||| ||||||||| | |||||||    
T  12770340 attaaagttaaatgttaattgtttgtctttaatatattttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttgggggacattttg 12770248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 35155357 - 35155265
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||||  ||| ||||||| || | | ||||||||||| ||||||||| |||||||||    
T  35155357 attaaagttaactgttaattgtttgtctttaatatcttttgagataaggataagaa-aaaatatatataaatttttaagtttggg-ggcattttg 35155265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 35155988 - 35156081
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||  ||||| |||||| ||||||||||||||||| |||| ||||||| || ||| ||||||||||||||||| ||| |||||||||    
T  35155988 attaaagttaaccgttaagtgtttgcctttaatatcttttgagacaagaataagaa-aaaaaatatataaattttcaagttcggggggcattttg 35156081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 52870182 - 52870091
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||||||||||||||||| |||||| ||||| ||||||| || ||| ||||||||||| ||||||||| |||||||||    
T  52870182 attaaagttaactgttaattgtttgtctttaatatattttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttggg-ggcattttg 52870091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 10373801 - 10373719
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    || ||| |||||||||||||||||| |  |||||||||    
T  10373801 taattgttaattgtttgcctttaatatcttttgagtcaaggataa----aaaaaatatataaattttcaagtttagagggcattttg 10373719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 50643059 - 50642981
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| || ||| ||||| ||||||||||||||| ||||||||    
T  50643059 tgttaattgtttg-ctttaatatcttttgagtcaaggataagaa-aaaaaacatatacattttcaagtttggg-ggcatttt 50642981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 9680860 - 9680941
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| |||||||||||||||||||||||||||| ||      || |||||||||||||||||||||| || |||||||||    
T  9680860 taattgttaatttgtttgtctttaatatcttttgagtcaagcat------aaaaaaaatataaattttcaagtttagggggcattttg 9680941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 34557709 - 34557761
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  34557709 attaaagctaattgttaattgtttgcttttaatatcttttgaatcaagtataa 34557761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 11707335 - 11707417
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||     || |||||||||||||||||||||| || |||||||||    
T  11707335 taattgttaatttgtttgcctttaatatcttttgagtcaaggata-----aaaaaaaatataaattttcaagtttagggggcattttg 11707417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 17826086 - 17826032
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||||    
T  17826086 attaaagctaattgttaattgtttatc-ttaatatcttttgagtcacgtataagaa 17826032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 36723878 - 36723960
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||     || |||||||||||||||||||||| || |||||||||    
T  36723878 taattgttaatttgtttgcctttaatatcttttgagtcaagcata-----aaaaaaaatataaattttcaagtttagggggcattttg 36723960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 7288118 - 7288196
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagttt 210  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||  || ||| ||||||||||| ||||||    
T  7288118 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaacatataaatttttaagttt 7288196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 32536431 - 32536350
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||| ||    |||| ||||||||||||||||| || |||||||||    
T  32536431 taattgttaattgtttgcctttaatat-ttttgagtcaaggataaaaa----aaaagtataaattttcaagtttagggggcattttg 32536350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 33740784 - 33740866
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||    || ||| |||||||||||||||||| ||  ||||||||    
T  33740784 taattgttaattgtttgcctttaatatcttttgaatcaaggataa----aaaaaatatataaattttcaagtttagggagcattttg 33740866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 22389033 - 22389111
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    |||||||||||| |||||||||||||||||||||| ||||||| || | | ||||||||||||||||| ||| || |||||    
T  22389033 gttaattgtttgcctttaatatcttttgagtcaag-ataagaa-aaaatatatataaattttcaagttcggggggtatttt 22389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 26615203 - 26615112
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||||| ||||| |||| | | ||||||| |||||| || ||| |||||||||    
T  26615203 taaagttaactgttaattgtttttctttaatatcttctgagtcaagaataag-agaaaatatatataaaatttcaaattcggggggcattttg 26615112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 43214725 - 43214654
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||||||||||||||||||||||||| ||     ||||||||||||||| ||||| ||| |||||||||    
T  43214725 ttgtttgcctttaatatcttttgagtcaagtatatga-----aaaaatataaatttttaagttcggggggcattttg 43214654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 8897496 - 8897587
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||| |  ||||||||||||||||| |||| ||| ||||||| ||  || ||||||||||||||||| |||||||||||||    
T  8897496 attaaagttaactgttaactacttgtctttaatatcttt-gagttaaggataagaaaaa--aatatataaattttcaagttcgggaggcattttg 8897587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 43281465 - 43281401
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||||||||| ||||||||||||||| ||||||  || ||| ||||||||||| |||||    
T  43281465 ttaattgtttgtctttaacatcttttgagtcaaggataaga--aaaaaatatataaatttttaagtt 43281401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 48721352 - 48721419
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgg 212  Q
    ||||||||||||||||||||||||||||| ||||| ||||||  || ||| ||||||||||| ||||||||    
T  48721352 gttaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaacatataaatttttaagtttgg 48721419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 8897192 - 8897100
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||  |||||||||||||||||||||| |||||| ||||| |||| || || ||| | ||||||||| ||||||||| |||||||||    
T  8897192 attaaagttaaccgttaattgtttgtctttaatatattttgaatcaag-ataataa-aaaaaacacataaatttttaagtttggggggcattttg 8897100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 26615633 - 26615683
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||| ||||    
T  26615633 taaagctaattgttaattgtttgcctttaatgtcctttgagtcaagcataa 26615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 52580469 - 52580550
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||| || || |||     || ||| ||||||||||| |||||| ||||||||||||    
T  52580469 taattgttaattgtttgcctttaatatcttttgaatctaggata-----aaaaaatatataaatttttaagtttaggaggcattttg 52580550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 24482204 - 24482159
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  24482204 taattgttaatttgtttgtctttaatatcttttgagtcaaggataa 24482159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 43281900 - 43281941
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    |||||||||||||||||||||||||||| ||||| |||||||    
T  43281900 ttaattgtttgtctttaatatcttttgaatcaaggataagaa 43281941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 40116305 - 40116241
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||| |||||||||||||||||||||| ||| ||  || ||| |||||||||||||||||    
T  40116305 gttaattgtttg-ctttaatatcttttgagtcaaggatatga--aaaaaacatataaattttcaagtt 40116241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 52869916 - 52869840
Alignment:
Q  144 taattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||| ||||||||||||||||| |||| ||| ||||||| ||  || ||||||||||||||||| ||| |||||||||    
T  52869916 taattgcttgtctttaatatcttt-gagttaaggataagaaaaa--aacatataaattttcaagttcggggggcattttg 52869840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 28297134 - 28297225
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||  |||||||| |||||||||||||| ||||||| ||| ||||||  || ||| |||||||||||||||||  || |||||||||    
T  28297134 attaaagttaacagttaattgcttgtctttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaagttcagggggcattttg 28297225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 32186155 - 32186234
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||  || ||||| |||||||||||| || ||  |||||||||    
T  32186155 tgttaattgtttg-ctttaatatcttttgaatcaaggataaga--aaaaaaaacataaattttcaaattcggagggcattttg 32186234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 45217627 - 45217706
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||  |||||||||||||||||      |||| | || |||||||||||||||||||||| || |||||||||    
T  45217627 taattgttaattgtttgcttttaatatcttttgagt------taaggataaaaaaaatataaattttcaagtttagg-ggcattttg 45217706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 46585021 - 46584939
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||     || ||||||||||||||||||  || || |||||||||    
T  46585021 taattgttaatttgtttgcctttaatatcttttgagtcaaggata-----aaaaaaaatataaattttcaaaattagggggcattttg 46584939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 48721042 - 48720951
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||  ||||||  || ||| ||||||||||||||||| ||| | |||||||    
T  48721042 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaatgataaga--aaaaaatatataaattttcaagttcgggggacattttg 48720951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 48803625 - 48803546
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||| || |||||| |||||||||| |||| ||| ||||||| ||  || ||||||||||||||||||||| |||||||||    
T  48803625 tgttaactgcttgtctataatatcttt-gagttaaggataagaaaaa--aatatataaattttcaagtttggggggcattttg 48803546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 17826838 - 17826880
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagt 172  Q
    |||||| ||| |||||||| |||||||||||||||||||||||    
T  17826838 ttaaagttaactgttaattatttgtctttaatatcttttgagt 17826880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 43760113 - 43760201
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||| || || |||||||||||||  |||| ||| |||||||    ||||||||||||||||||||||||  |||||||||    
T  43760113 attaaagttaactgttaaatgcttatctttaatatctt--gagttaaggataagaa----aaaaatataaattttcaagtttggagggcattttg 43760201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 52870485 - 52870559
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaa 206  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||  || ||| ||||||||||||||    
T  52870485 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaa 52870559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 18611422 - 18611345
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||  || ||| | |||||||||||||||    
T  18611422 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataaga--aaaaaataaataaattttcaagtt 18611345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 44156686 - 44156641
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    
T  44156686 taattgttaatttgtttgcctttaatatcttttgagtcaagaataa 44156641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 44432630 - 44432675
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    
T  44432630 taattgttaatttgtttgcctttaatatcttttgagtcaaggataa 44432675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 49216839 - 49216901
Alignment:
Q  157 ttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||| |||||||    ||||| |||||||||||||||  || |||||||||    
T  49216839 ttaatatcttttgagtcaaggataagaa----aaaaagataaattttcaagttcagggggcattttg 49216901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 27134518 - 27134451
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||| ||||||  ||||||| || ||| |||||||||||||||||  || |||||||||    
T  27134518 ctttaatatcttttaagtcaaagataagaaaaa-aaatatataaattttcaagttcagggggcattttg 27134451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 31050223 - 31050144
Alignment:
Q  142 gttaattgtttgtctttaatatc-ttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||| |||||||| ||||||||||   || | ||||| |||||||||||||||||| || | | |||||||||    
T  31050223 gttaattgtttgtccttaatatctttttgagtca---atgataagaaaaaaaatataaattttcaaattcgtggggcattttg 31050144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Complemental strand, 47985116 - 47985088
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaa 175  Q
    |||||||||||||||||||||||||||||    
T  47985116 ttgtttgtctttaatatcttttgagtcaa 47985088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 7338674 - 7338765
Alignment:
Q  130 ttaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||  || ||| ||||||||||||||||||||  |||||||||    
T  7338674 ttaaagctaatggttaattgtttgcctttaatatcttttgagtcaagtataaga--aaaaaatatataaattttcaagtttggagggcattttg 7338765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 5607047 - 5606972
Alignment:
Q  148 tgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  5607047 tgtttgcctttaatgtcttttgagtcaagtataagaagaagaaaaatataaatttttaagttcggggggcattttg 5606972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 1091182 - 1091272
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||  || ||| ||||||||||| ||||| ||| |||||||||    
T  1091182 taaagctaattgttaattgtttgtctttaatatcatttgagtcaaggataaga--aaaaaatatataaattttaaagttcggggggcattttg 1091272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 28637931 - 28638023
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| |||||||||    
T  28637931 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttggggggcattttg 28638023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 21540576 - 21540484
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttgt 224  Q
    ||||||||||| ||||||||||||  || |||||||||||||||||||||||   |||| |||||||||||||||||| || ||| ||||||||||    
T  21540576 attaaagctaactgttaattgtttccctgtaatatcttttgagtcaagtata---agaaaaaaaatataaattttcaacttcggggggcattttgt 21540484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 14252116 - 14252040
Alignment:
Q  147 ttgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| ||||| ||| || ||||||    
T  14252116 ttgtttgcctttaatatcttttgagtcaagtttaggaagaaaaaaaatataaatttttaagttcggggggtattttg 14252040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 45159849 - 45159764
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| |||||||||||||||||||||||||||| |||  || || ||||||||||||||| |||||| || |||||||||    
T  45159849 taattgttaatttgtttgtctttaatatcttttgagtcaagcata--aaaaaaaaaaatataaatttttaagtttagggggcattttg 45159764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 23849208 - 23849130
Alignment:
Q  145 aattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||| |||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||| ||| | |||||||    
T  23849208 aattgtttgcctttaatatcttttaagtcaaggataagaaaaaaaaatatataaattttcaagttcgggggacattttg 23849130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 27482126 - 27482207
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| ||||||||||||||||||| || |||     || |||||||||||||||||||||| || |||||||||    
T  27482126 taattgttaattgtttgcctttaatatcttttgagtcgaggata-----aaaaaaaatataaattttcaagtttagggggcattttg 27482207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 39500844 - 39500936
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||  ||||||| ||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| |||||||||    
T  39500844 attaaagttaaccgttaattatttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttggggggcattttg 39500936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 7275449 - 7275544
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaa-atataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||||||| ||||||||| ||| || | ||| |||| || || |||| ||||||||||||||||||||| |||||||||    
T  7275449 attaaagttaactgttaattgtttgcctttaatatttttcgaattaaggataataaaaaaaaaatatataaattttcaagtttggggggcattttg 7275544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 10316424 - 10316377
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  10316424 taattgttaattgtttgcctttaatatcttttgagtcaaggataagaa 10316377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 10317106 - 10317059
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  10317106 taattgttaattgtttgcctttaatatcttttgagtcaaggataagaa 10317059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 12139185 - 12139261
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||  || ||| ||||||||||| |||||    
T  12139185 taaagctaattgttaattgtttttctttaatatcatttgattcaaggataaga--aaaaaatatataaattttaaagtt 12139261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 17815735 - 17815645
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| | |||||||||||||||||||||||||||| ||||| ||||||  || ||| ||||||||||| ||||||||| |||||||||    
T  17815735 attaaagttaactattaattgtttgtctttaatatcttttgaatcaag-ataaga--aaaaaacatataaatttttaagtttggg-ggcattttg 17815645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 22064176 - 22064085
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||| ||||||| ||||| ||||||  || ||| ||||||||||| |||||| || |||||||||    
T  22064176 attaaagttaactgttaattgtttgtctttaataacttttgaatcaag-ataaga--aaaaaacatataaatttttaagtttagggggcattttg 22064085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 6730612 - 6730547
Alignment:
Q  143 ttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||| ||||||||||||||||||  || ||||||| || |||||||||||||||||||||    
T  6730612 ttaattgtttgcctttaatatcttttgagttcaggataagaa-aaaaaaaatataaattttcaagtt 6730547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 18060353 - 18060439
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||||||||  ||||||||||||||||||||| |||| ||  | | | |||||||||||||||||| || | |||||||    
T  18060353 taattgttaattgtttgcttttaatatcttttgagtcaaggataaaaaatatatatatataaattttcaagtttaggggacattttg 18060439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 5607383 - 5607453
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||||||||| |||| ||||| |||||||||||||||| ||||||  || ||| |||||||||||||||||    
T  5607383 taattgttaattatttgcctttagtatcttttgagtcaaggataaga--aaaaaatatataaattttcaagtt 5607453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 7532490 - 7532568
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatttt 222  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||| ||||| ||||||||    
T  7532490 tgttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaag-ttggggggcatttt 7532568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 21545190 - 21545281
Alignment:
Q  128 cattaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||  ||| ||||||||||||| ||||||||| |||||||||| ||||||||| ||   ||| |||||||||||||||  ||||||||||||    
T  21545190 cattaaaattaaatgttaattgtttg-ctttaatattttttgagtcatgtataagaaaaa---aaacataaattttcaagttcaggaggcattttg 21545281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 5438280 - 5438236
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  5438280 taattgttaattgtttgcctttaatatcttttgagtcaaggataa 5438236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 10316060 - 10316016
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataa 181  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  10316060 taattgttaattgtttgcctttaatatcttttgagtcaaggataa 10316016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 17816054 - 17816144
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||| ||| ||   ||||| ||| ||||||||||| ||||| ||| |||||||||    
T  17816054 attaaagttaactgttaattgtttgtctttaatatc-tttgagttaaggat---aagaaaaaatatataaatttttaagttcggggggcattttg 17816144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 28780223 - 28780263
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgag 171  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  28780223 taaagctaattgttaattgtttgtctttaatatcatttgag 28780263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 41425688 - 41425609
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| |||  ||| |||||||| |||||||||||||||| ||||| ||||||| || |||| ||||||||||||||||    
T  41425688 attaaagttaaccgttgattgtttgcctttaatatcttttgaatcaaggataagaa-aaaaaaattataaattttcaagtt 41425609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 9758961 - 9759008
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||    
T  9758961 taattgttaattgtttgcctttaatatcttttgagtcaatgataagaa 9759008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 10315696 - 10315649
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||    
T  10315696 taattgttaattgtttgcctttaatatcttttgagtcaaagataagaa 10315649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 20207273 - 20207221
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttg 211  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  20207273 ctttaatatcttttgagtcaagtataagaa----aaaaatataaatttttaagtttg 20207221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 23849264 - 23849221
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  23849264 tgttaattgtttgtctttaatatcttttaagttaagtataagaa 23849221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 9758532 - 9758479
Alignment:
Q  155 ctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||    
T  9758532 ctttaatatcttttgagtcaagtataagaagaa-aaatatacaaatttttaagtt 9758479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 10316744 - 10316702
Alignment:
Q  142 gttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  10316744 gttaattgtttgcctttaatatcttttgagtcaaggataagaa 10316702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 10317550 - 10317584
Alignment:
Q  150 tttgtctttaatatcttttgagtcaagtataagaa 184  Q
    |||||||||||||||||||||||||||||||||||    
T  10317550 tttgtctttaatatcttttgagtcaagtataagaa 10317584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 41726950 - 41727031
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||| | ||||||||| |||||||||||| |||     || |||||||||||||||||||||| |  |||||||||    
T  41726950 taattgttaattgttcgcctttaatatattttgagtcaaggata-----aaaaaaaatataaattttcaagtttagagggcattttg 41727031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 12138755 - 12138702
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaa 184  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||| || |||||    
T  12138755 taaagctaaatgttaattgcttgcctttaatatcttttgagtcaaatacaagaa 12138702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 28637295 - 28637340
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataa 181  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  28637295 taattgttaatttgtttgtctttaatatcttttgagtcaaggataa 28637340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 39500539 - 39500462
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||| ||||||  || ||| |||||||||||||||||    
T  39500539 attaaagttaactgttaattgcttgtctttaatatc-tttgagttaaggataaga--aaaaaatatataaattttcaagtt 39500462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 1090768 - 1090724
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgagtcaa 175  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||    
T  1090768 taaagctaaatgttaattgcttgcctttaatatcttttgagtcaa 1090724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 6924248 - 6924288
Alignment:
Q  131 taaagctaattgttaattgtttgtctttaatatcttttgag 171  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  6924248 taaaactaattgttaattgtttgtctttaatatcatttgag 6924288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 28587075 - 28587004
Alignment:
Q  137 taattgttaat-tgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagttt 210  Q
    ||||||||||| |||||| ||||||||||||||||||||||   || || || || |||||||||||||||||||    
T  28587075 taattgttaatctgtttgcctttaatatcttttgagtcaag---aataaaaaaaataatataaattttcaagttt 28587004  T

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Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 29366060 - 29365979
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||      || ||||||||||||||| |||||| || |||||||||    
T  29366060 taattgttaatttgtttgcctttaatatcttttgagtcaagcat------aaaaaaaatataaatttttaagtttagggggcattttg 29365979  T

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Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 43207112 - 43207029
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||| |||||||||||||||||| ||  ||   || || | |||||||||||||||||||| || | |||||||    
T  43207112 taattgttaattgtttgcctttaatatcttttgagttaaagat---aaaaaaataaatataaattttcaagtttaggggacattttg 43207029  T

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Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 22064480 - 22064571
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| ||||||||| ||||||||||||||||| |||| ||| | ||||| |   || ||||||||||||||||| ||| |||||||||    
T  22064480 attaaagttaactgttaattgcttgtctttaatatcttt-gagttaaggagaagaaaat--aatatataaattttcaagttcggggggcattttg 22064571  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 3106375 - 3106330
Alignment:
Q  178 ataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||| |||||||||||||||||||||  || |||||||||    
T  3106375 ataagaagaaaaaaaatataaattttcaagttcagggggcattttg 3106330  T

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Target: scaffold0445 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 13410 - 13500
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| ||| ||   ||||| ||||||||||||||||||||| ||| |||||||||    
T  13410 attaaagttaattgttaattgcttgtctttaatatcttttgagttaaggat---aagaaaaaaaatataaattttcaagttcggg-ggcattttg 13500  T

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Target: scaffold0445; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 13107 - 13016
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| |||  ||||| | ||||||||||||||||||||||||||| ||||||  || ||||| ||||||||| || |||||| |||||||||    
T  13107 attaaagataaccgttaactatttgtctttaatatcttttgagtcaaggataaga--aaaaaaaacataaatttttaattttggg-ggcattttg 13016  T

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Target: scaffold0060 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 66860 - 66768
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| || ||| ||||||||||| ||||||||| ||| |||||    
T  66860 attaaagttaactgttaattgtttgtctttaatatcttttgaatcaag-ataagaa-aaaaaacatataaatttttaagtttggggggctttttg 66768  T

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Target: scaffold0060; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 67163 - 67240
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    ||||||| ||| ||||||||  |||||||||||||||||||| ||||| ||||||  || ||| |||||||||||||||||    
T  67163 attaaagttaactgttaattacttgtctttaatatcttttgaatcaag-ataaga--aaaaaatatataaattttcaagtt 67240  T

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Target: scaffold0060; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 46754 - 46688
Alignment:
Q  159 aatatcttttgagtcaagtataagaagaagaaaaatata--aattttcaagtttgggaggcattttg 223  Q
    |||| ||||||||||||  |||||||||| |||||||||  |||||||||||| |||||| ||||||    
T  46754 aataacttttgagtcaatgataagaagaaaaaaaatatataaattttcaagttcgggaggtattttg 46688  T

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Target: scaffold0140 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 4638 - 4552
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttg-agtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| || || |||||||||||| ||||| ||| | |||||||    
T  4638 taattgttaattgtttgtctttaatatcttttgtagtcaaggataagaa-aaaaataatataaattttaaagttcgggggacattttg 4552  T

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Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 27168 - 27115
Alignment:
Q  141 tgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaat 194  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  27168 tgttaattatgtgtctttaatatctttttagtcaagtataagaagaagaaaaat 27115  T

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Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 34901 - 34977
Alignment:
Q  145 aattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||  ||||||||||||| ||||||| ||||||  || ||| |||||||||||||||||  ||||||||||||    
T  34901 aattgtttgcttttaatatcttttaagtcaaggataaga--aaaaaatatataaattttcaagttcaggaggcattttg 34977  T

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Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 94823 - 94913
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||| ||| ||   ||||| ||| ||||||||||||||||| ||| |||||||||    
T  94823 attaaagttaactgttaattgtttgtctttaatatc-tttgagttaaggat---aagaaaaaatatataaattttcaagttcggggggcattttg 94913  T

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Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 94517 - 94427
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    ||||||| ||| | ||||||||||||||||||||| |||||| ||||| ||||||  || ||| ||||||||||| | ||||||| |||||||||    
T  94517 attaaagttaactattaattgtttgtctttaatat-ttttgactcaag-ataaga--aaaaaacatataaatttttatgtttggggggcattttg 94427  T

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Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 34088 - 34165
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtt 209  Q
    |||||| |||| ||||||||||||| ||||||||||||| |||| ||||||   ||||| |||| ||||||||||||||||    
T  34088 attaaaactaactgttaattgtttgcctttaatatctttcgagtgaagtat---aagaaaaaaagtataaattttcaagtt 34165  T

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Target: scaffold1063 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 832 - 914
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttggg 213  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||  ||||||  || ||| ||||||||||| || ||||||    
T  832 attaaagataaccgttaattgtttgtctttaatatcttttgagtcaaagataaga--aaaaaacatataaatttttaattttggg 914  T

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Target: scaffold0672 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 6149 - 6233
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| || || |||||   ||||||| |||||| || |||||||||    
T  6149 taattgttaatttgtttgtctttaatatcttttgagtcaaggataaaaaaaaaaaaaa---aaattttaaagtttagggggcattttg 6233  T

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Target: scaffold0474 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 12389 - 12351
Alignment:
Q  137 taattgttaattgtttgtctttaatatcttttgagtcaa 175  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12389 taattgttaattgtttgcctttaatatcttttgagtcaa 12351  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 131147 - 131066
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcatt 220  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||   || || ||||||||||||||| |||||| || ||||||    
T  131147 taattgttaatttgtttgcctttaatatcttttgagtcaaggat---aaaaaaaaaaatataaatttttaagtttagggggcatt 131066  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 38035 - 38089
Alignment:
Q  129 attaaagctaattgttaattgtttgtctttaatatcttttgagtcaagtataaga 183  Q
    ||||||| |||  |||||||||||||| |||||||||||||| ||||| ||||||    
T  38035 attaaagttaaccgttaattgtttgtcattaatatcttttgaatcaaggataaga 38089  T

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Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 37934 - 37906
Alignment:
Q  142 gttaattgtttgtctttaatatcttttga 170  Q
    |||||||||||||||||||||||||||||    
T  37934 gttaattgtttgtctttaatatcttttga 37906  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 42347 - 42430
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaa-ttttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||     || ||||||||||| ||||||||||| || |||||||||    
T  42347 taattgttaatttgtttgcctttaatatcttttgagtcaaggata-----aaaaaaaatataaatttttcaagtttaggtggcattttg 42430  T

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Target: scaffold0214 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 16448 - 16531
Alignment:
Q  137 taattgttaatt-gtttgtctttaatatcttttgagtcaagtataagaagaagaaaaatataaattttcaagtttgggaggcattttg 223  Q
    |||||||||||| ||||  |||||||| ||||||||||||| ||||    || || ||||||||||||||||||| || |||||||||    
T  16448 taattgttaatttgtttacctttaatagcttttgagtcaaggataa----aataataatataaattttcaagtttagggggcattttg 16531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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