View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9833_low_23 (Length: 381)

Name: NF9833_low_23
Description: NF9833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9833_low_23
NF9833_low_23
[»] chr7 (45 HSPs)
chr7 (22-211)||(49035012-49035201)
chr7 (34-210)||(666175-666351)
chr7 (34-211)||(42071524-42071701)
chr7 (34-217)||(5776524-5776707)
chr7 (48-209)||(222916-223077)
chr7 (34-215)||(26215717-26215898)
chr7 (34-211)||(36926413-36926590)
chr7 (34-209)||(7443835-7444010)
chr7 (34-211)||(43052286-43052463)
chr7 (34-209)||(3931307-3931483)
chr7 (34-209)||(37333703-37333879)
chr7 (29-211)||(7539605-7539787)
chr7 (34-132)||(388498-388596)
chr7 (45-132)||(15433700-15433787)
chr7 (48-210)||(17025970-17026133)
chr7 (48-182)||(8390111-8390245)
chr7 (25-181)||(8110793-8110949)
chr7 (34-132)||(28950264-28950363)
chr7 (48-194)||(18250619-18250765)
chr7 (48-211)||(45054802-45054960)
chr7 (62-210)||(5795493-5795629)
chr7 (48-179)||(20400209-20400339)
chr7 (48-194)||(35544142-35544287)
chr7 (23-215)||(37106146-37106339)
chr7 (48-139)||(18740832-18740923)
chr7 (34-92)||(45174737-45174795)
chr7 (23-131)||(27232356-27232464)
chr7 (48-171)||(41449191-41449314)
chr7 (102-181)||(20259957-20260036)
chr7 (150-217)||(42012253-42012320)
chr7 (23-100)||(3941792-3941869)
chr7 (48-171)||(23236755-23236878)
chr7 (32-211)||(33899562-33899736)
chr7 (42-166)||(39429503-39429627)
chr7 (155-225)||(15433619-15433689)
chr7 (50-171)||(22074605-22074726)
chr7 (23-211)||(37401984-37402172)
chr7 (32-132)||(26719225-26719325)
chr7 (48-143)||(10618093-10618188)
chr7 (48-171)||(48633288-48633411)
chr7 (155-217)||(28950374-28950435)
chr7 (155-220)||(388422-388487)
chr7 (48-169)||(11596405-11596521)
chr7 (135-211)||(30918934-30919010)
chr7 (155-211)||(45174641-45174697)
[»] chr4 (44 HSPs)
chr4 (216-371)||(35188170-35188325)
chr4 (41-211)||(43386538-43386708)
chr4 (34-210)||(49820383-49820559)
chr4 (34-208)||(50605462-50605636)
chr4 (34-211)||(19850136-19850313)
chr4 (48-216)||(28266717-28266880)
chr4 (45-211)||(9469432-9469597)
chr4 (48-207)||(22183771-22183930)
chr4 (37-209)||(4275504-4275676)
chr4 (34-209)||(21436313-21436488)
chr4 (34-209)||(53369068-53369243)
chr4 (34-144)||(36543365-36543475)
chr4 (89-211)||(79764-79885)
chr4 (48-182)||(51409087-51409221)
chr4 (34-211)||(48977008-48977185)
chr4 (48-169)||(52813045-52813166)
chr4 (34-132)||(44792752-44792850)
chr4 (34-129)||(45674378-45674473)
chr4 (48-216)||(52705592-52705760)
chr4 (62-211)||(55892665-55892807)
chr4 (23-128)||(36156858-36156963)
chr4 (23-209)||(54742089-54742277)
chr4 (126-211)||(7505428-7505513)
chr4 (122-211)||(51994087-51994176)
chr4 (48-171)||(44377649-44377772)
chr4 (34-137)||(12790122-12790220)
chr4 (128-206)||(52812976-52813054)
chr4 (23-131)||(43812624-43812732)
chr4 (23-206)||(48340194-48340373)
chr4 (63-180)||(24009418-24009535)
chr4 (123-211)||(22720748-22720836)
chr4 (50-182)||(46945150-46945282)
chr4 (89-217)||(50240908-50241036)
chr4 (45-92)||(48731978-48732025)
chr4 (122-211)||(25133937-25134026)
chr4 (48-219)||(32398350-32398517)
chr4 (155-211)||(44792861-44792917)
chr4 (48-171)||(16743092-16743215)
chr4 (153-208)||(49378170-49378225)
chr4 (58-112)||(6874934-6874988)
chr4 (155-209)||(45674310-45674364)
chr4 (124-209)||(40797160-40797245)
chr4 (55-143)||(1803239-1803327)
chr4 (155-211)||(12790226-12790282)
[»] chr5 (38 HSPs)
chr5 (22-211)||(1224568-1224757)
chr5 (34-211)||(32157344-32157521)
chr5 (27-211)||(43385802-43385987)
chr5 (34-206)||(18879629-18879801)
chr5 (45-216)||(27905479-27905650)
chr5 (23-169)||(15931983-15932129)
chr5 (48-211)||(5385062-5385225)
chr5 (55-211)||(1840958-1841113)
chr5 (95-211)||(3805393-3805509)
chr5 (55-209)||(27450970-27451124)
chr5 (34-132)||(29322134-29322232)
chr5 (55-211)||(34720043-34720199)
chr5 (34-137)||(22921509-22921612)
chr5 (55-206)||(26299455-26299606)
chr5 (48-182)||(4983938-4984072)
chr5 (45-131)||(38523227-38523313)
chr5 (23-171)||(31620005-31620154)
chr5 (55-168)||(39408766-39408879)
chr5 (55-211)||(34724019-34724175)
chr5 (55-211)||(26297909-26298065)
chr5 (32-211)||(10493383-10493557)
chr5 (48-211)||(11136636-11136799)
chr5 (48-211)||(19283558-19283720)
chr5 (48-219)||(26217419-26217590)
chr5 (55-168)||(39407028-39407141)
chr5 (23-211)||(2675306-2675492)
chr5 (23-211)||(20188354-20188542)
chr5 (48-217)||(27195426-27195590)
chr5 (48-145)||(41782764-41782861)
chr5 (23-182)||(20191182-20191340)
chr5 (50-209)||(28242396-28242550)
chr5 (55-210)||(34856951-34857102)
chr5 (66-182)||(19715806-19715921)
chr5 (127-209)||(14501398-14501480)
chr5 (155-217)||(29322061-29322123)
chr5 (122-171)||(28430593-28430642)
chr5 (160-211)||(38523335-38523386)
chr5 (48-132)||(13937226-13937310)
[»] chr8 (15 HSPs)
chr8 (22-211)||(22563267-22563451)
chr8 (63-206)||(11161087-11161230)
chr8 (48-211)||(43966891-43967049)
chr8 (23-209)||(33280588-33280772)
chr8 (95-210)||(22930869-22930979)
chr8 (73-211)||(9413262-9413400)
chr8 (29-171)||(15211859-15212001)
chr8 (23-211)||(23180748-23180941)
chr8 (58-131)||(1091164-1091236)
chr8 (50-182)||(12377754-12377886)
chr8 (48-171)||(25731827-25731950)
chr8 (121-170)||(17865720-17865769)
chr8 (25-69)||(17865650-17865694)
chr8 (155-211)||(27189633-27189689)
chr8 (34-92)||(453061-453119)
[»] chr6 (21 HSPs)
chr6 (34-211)||(18961849-18962026)
chr6 (34-217)||(7957052-7957235)
chr6 (34-220)||(10346207-10346393)
chr6 (48-206)||(472835-472993)
chr6 (23-171)||(25181113-25181261)
chr6 (121-210)||(6998581-6998670)
chr6 (23-211)||(10962370-10962558)
chr6 (32-211)||(7436704-7436882)
chr6 (25-171)||(12428087-12428233)
chr6 (48-202)||(33109845-33109999)
chr6 (48-100)||(6998662-6998714)
chr6 (45-215)||(9463666-9463830)
chr6 (48-182)||(22295389-22295523)
chr6 (32-145)||(3082288-3082401)
chr6 (121-210)||(4442041-4442130)
chr6 (32-182)||(13311381-13311531)
chr6 (23-131)||(27925474-27925582)
chr6 (45-215)||(8291385-8291555)
chr6 (107-176)||(2557120-2557189)
chr6 (23-131)||(17493281-17493388)
chr6 (155-211)||(27925406-27925462)
[»] chr2 (26 HSPs)
chr2 (34-211)||(27633146-27633323)
chr2 (34-211)||(36538081-36538258)
chr2 (34-210)||(20986069-20986245)
chr2 (48-209)||(44741269-44741430)
chr2 (34-177)||(41958585-41958728)
chr2 (45-182)||(12139399-12139536)
chr2 (34-211)||(26435771-26435948)
chr2 (48-218)||(2647573-2647743)
chr2 (34-132)||(33164523-33164621)
chr2 (34-132)||(33830961-33831059)
chr2 (66-180)||(39801156-39801270)
chr2 (33-209)||(34116711-34116888)
chr2 (39-171)||(38410202-38410334)
chr2 (23-131)||(30711535-30711643)
chr2 (23-143)||(39689627-39689747)
chr2 (23-216)||(11027286-11027479)
chr2 (26-145)||(40458402-40458521)
chr2 (34-100)||(34064244-34064310)
chr2 (39-216)||(20204352-20204529)
chr2 (48-209)||(18667131-18667290)
chr2 (48-165)||(3409822-3409939)
chr2 (21-211)||(18053398-18053590)
chr2 (155-209)||(33830896-33830950)
chr2 (50-171)||(40675209-40675330)
chr2 (48-138)||(1093959-1094049)
chr2 (23-112)||(33475725-33475814)
[»] chr3 (35 HSPs)
chr3 (48-211)||(52198780-52198943)
chr3 (34-211)||(39471038-39471215)
chr3 (22-171)||(15823134-15823276)
chr3 (48-211)||(38644198-38644360)
chr3 (25-216)||(46294187-46294378)
chr3 (34-207)||(32688567-32688740)
chr3 (28-181)||(39943685-39943838)
chr3 (33-211)||(53530115-53530292)
chr3 (25-211)||(7029139-7029324)
chr3 (23-209)||(33439191-33439376)
chr3 (48-207)||(25252882-25253041)
chr3 (102-217)||(39133776-39133891)
chr3 (25-211)||(27040494-27040680)
chr3 (48-211)||(5418047-5418210)
chr3 (34-137)||(23206896-23206999)
chr3 (48-206)||(33895925-33896083)
chr3 (75-211)||(30740736-30740872)
chr3 (34-136)||(41609381-41609481)
chr3 (23-131)||(54394001-54394109)
chr3 (45-171)||(8086904-8087030)
chr3 (48-179)||(12710096-12710227)
chr3 (45-171)||(19561377-19561503)
chr3 (109-206)||(20407784-20407881)
chr3 (48-211)||(20661678-20661842)
chr3 (55-131)||(45714187-45714263)
chr3 (48-211)||(40942904-40943061)
chr3 (31-211)||(7834066-7834243)
chr3 (122-211)||(52934235-52934319)
chr3 (155-211)||(41609318-41609374)
chr3 (105-171)||(39714826-39714892)
chr3 (155-209)||(54394121-54394175)
chr3 (25-69)||(25633712-25633756)
chr3 (90-206)||(51067701-51067817)
chr3 (32-112)||(54432848-54432928)
chr3 (155-211)||(54432959-54433015)
[»] chr1 (43 HSPs)
chr1 (34-211)||(36418524-36418701)
chr1 (37-209)||(45654329-45654501)
chr1 (54-220)||(32179328-32179494)
chr1 (50-211)||(37441788-37441954)
chr1 (37-209)||(21681584-21681756)
chr1 (41-206)||(48575702-48575867)
chr1 (23-218)||(14770811-14771006)
chr1 (34-132)||(24470485-24470583)
chr1 (48-209)||(24575306-24575467)
chr1 (51-211)||(29678080-29678240)
chr1 (23-217)||(7595718-7595912)
chr1 (23-216)||(35810109-35810301)
chr1 (50-194)||(31868910-31869054)
chr1 (34-211)||(35309012-35309185)
chr1 (27-211)||(45582051-45582235)
chr1 (23-218)||(14578979-14579174)
chr1 (48-211)||(5205082-5205246)
chr1 (32-211)||(15257803-15257977)
chr1 (48-211)||(43090005-43090163)
chr1 (23-211)||(23916135-23916322)
chr1 (23-211)||(42916714-42916902)
chr1 (23-217)||(46265556-46265748)
chr1 (32-209)||(7955655-7955832)
chr1 (48-176)||(13645689-13645817)
chr1 (26-211)||(42936499-42936686)
chr1 (48-165)||(7994796-7994912)
chr1 (123-211)||(28005739-28005827)
chr1 (109-175)||(18349816-18349882)
chr1 (93-211)||(38061637-38061755)
chr1 (62-211)||(44595833-44595976)
chr1 (23-123)||(15662382-15662482)
chr1 (72-216)||(39577640-39577784)
chr1 (129-217)||(47603463-47603551)
chr1 (24-211)||(40002324-40002511)
chr1 (34-96)||(47603408-47603470)
chr1 (72-169)||(3576984-3577081)
chr1 (172-213)||(15014017-15014058)
chr1 (23-112)||(15014107-15014196)
chr1 (55-132)||(38061570-38061647)
chr1 (72-171)||(36118269-36118367)
chr1 (160-216)||(19507937-19507993)
chr1 (155-211)||(24470594-24470650)
chr1 (190-218)||(27077632-27077660)
[»] scaffold0316 (1 HSPs)
scaffold0316 (34-211)||(18714-18891)
[»] scaffold0658 (1 HSPs)
scaffold0658 (34-211)||(6363-6529)
[»] scaffold0043 (1 HSPs)
scaffold0043 (48-217)||(16490-16658)
[»] scaffold0224 (1 HSPs)
scaffold0224 (23-211)||(7908-8096)
[»] scaffold0444 (1 HSPs)
scaffold0444 (48-171)||(1386-1509)
[»] scaffold0106 (1 HSPs)
scaffold0106 (108-211)||(26497-26600)


Alignment Details
Target: chr7 (Bit Score: 150; Significance: 3e-79; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 22 - 211
Target Start/End: Original strand, 49035012 - 49035201
Alignment:
Q  22 tagttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||| |||| ||||||||||| |||    
T  49035012 tagttatgtgatttgagcaaacaaactgaacctaacgagccgaatcgaactgttcgtgaaccttaaaagagtcgaactcgagctaaaaaaagagttcgtg 49035111  T
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    || ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49035112 tcaaactcgagtcgagtttcgagccgagcaaaatcttatcaagtcgagccgagctcagacatgtttgattcgattcgactcatttccagc 49035201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 666175 - 666351
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||  ||||||||||| |||||||||||||||||||     
T  666175 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaacttgagctgaaaaaatagtttgtgtcgaactcgagc 666274  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccag 210  Q
    |||||||||||| || | || |||||||||||| ||| ||||||||||||||| | ||||| |||||||||||||||    
T  666275 cgagtttcgagccgaaccaattcttatcgagtcaagccgagctcagacatgttcggttcgactcgactcatttccag 666351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 42071701 - 42071524
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||     
T  42071701 ttgagcaaccgaactgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 42071602  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || |||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| ||||    
T  42071601 cgagtttcgagccgaaccaattcttattgagtcgagccgagctcagacatgtttggttcgactcgactcattttcagc 42071524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 217
Target Start/End: Original strand, 5776524 - 5776707
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||||  ||| ||||| ||||||| ||||||||||| ||||  |||||||||||||     
T  5776524 ttgagcaaccgaactgaacctaacgagccgaaccgaattgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcttgtcgaactcgagc 5776623  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    ||||||||||||||| | || |||||||||||||||| |||||||| || ||| | ||||| |||||||||||||||| |||||    
T  5776624 cgagtttcgagctgaactaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagccctaat 5776707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 222916 - 223077
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||| || || |||||||||||||||| ||||||||||||||||||||||||||| |    
T  222916 tgaacctaacgagccgaaccgaactgttcgtgaattttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagtttcgagccg 223015  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |||||| | ||||||||||||||  |||||||||| ||| ||| ||| || |||||||||||    
T  223016 agcaaatttttatcgagtcgagccaagctcagacaggttcgatccgactcaactcatttcca 223077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 34 - 215
Target Start/End: Complemental strand, 26215898 - 26215717
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||| ||||||||||||||     
T  26215898 ttgagcaaccgaactgaacctaacgagtcaaaccgaactgttcgtgaactttaaacgagccgaactcgagttgaaaaaatagttcgtgtcgaactcgagc 26215799  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctcta 215  Q
    |||||||||||| || | || |||||||||||||||| |||||||| || ||| | ||||| ||||||||||||||||||||    
T  26215798 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagctcta 26215717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 36926590 - 36926413
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||  ||| | ||| ||||||| || |||||||| |||| ||||||||||||||     
T  36926590 ttgagcaaccgaactgaacctaacgagccgaatcgaactgttcgtgaattttaaatgagccgaactcgagatgaaaaaatagttcgtgtcgaactcgagc 36926491  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || |||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||    
T  36926490 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcgattcgactcgactcatttccagc 36926413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 209
Target Start/End: Complemental strand, 7444010 - 7443835
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||| |||||  |||||| ||||||||||| |||||||||||||||||||     
T  7444010 ttgagcaaacgaactgaacctaacaagccaaaccgaactgttcgtgaacattaaacgagctgaactcgagctgaaaaaatagtttgtgtcgaactcgagc 7443911  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |||||||||| | || | || |||||||||||||||| |||||||||||  || | ||||| ||||||||||||||    
T  7443910 cgagtttcgaaccgaaccaattcttatcgagtcgagccgagctcagacagattcggttcgactcgactcatttcca 7443835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 43052463 - 43052286
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||| ||| | ||| ||||||| ||||||||||| |||| ||||||||||||||     
T  43052463 ttgagcaaccgaactgaacctaacgagccgaactgaactgttcgtgaactttaaatgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 43052364  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||||| || | || |||||||||||||||| |||||||| || ||| | ||||| |||||| |||||||||    
T  43052363 caagtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactgatttccagc 43052286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 209
Target Start/End: Original strand, 3931307 - 3931483
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctg-aaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||  |||||| ||||| |||||| |||| ||||||||||||||    
T  3931307 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaaatagttcgtgtcgaactcgag 3931406  T
Q  133 tcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
     |||||||||||| || | || |||||||||||||||| ||||||||||| ||| | || || || |||||||||||    
T  3931407 ccgagtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcggttggactcaactcatttcca 3931483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 34 - 209
Target Start/End: Complemental strand, 37333879 - 37333703
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaa-aaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||| |||| ||||  | |||||||||||    
T  37333879 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaaatagttcatatcgaactcgag 37333780  T
Q  133 tcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
     |||||||||||| || | || ||||||||||||||||  ||||||| || ||| | ||||| ||||||||||||||    
T  37333779 ccgagtttcgagccgaaccaattcttatcgagtcgagccaagctcaggcaggttcggttcgactcgactcatttcca 37333703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 29 - 211
Target Start/End: Original strand, 7539605 - 7539787
Alignment:
Q  29 gtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaact 128  Q
    |||||||||  |||| ||||||||||| ||||| |||||||||||||||| ||| ||| ||||| ||||||| ||||||||||| | || | ||||||||    
T  7539605 gtgatttgaataaacgaactgaacctatcgagctgaaccgaactgttcgtaaactttaaacgagccgaactcgagctgaaaaaaaaattcgagtcgaact 7539704  T
Q  129 cgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||| ||||||||||||||| | || |||||||||||||||| ||||||||||  ||| || || | ||| ||||||||||||    
T  7539705 cgagccgagtttcgagctgaaccaattcttatcgagtcgagccgagctcagacgagttcgactcaactcggctcatttccagc 7539787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 388596 - 388498
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||    
T  388596 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgag 388498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 15433787 - 15433700
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||    
T  15433787 aactgaacctaacgagccgaaccgaactgttcatgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgag 15433700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 210
Target Start/End: Original strand, 17025970 - 17026133
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagttt-gtgtcgaactcgagtcgagtttcgagct 146  Q
    ||||||||||||| ||||||||  |||||| |||| ||| ||||| ||||||| || | |||||| || || || || |||||||||||||||||||||     
T  17025970 tgaacctaacgagtcgaaccgagttgttcgcgaactttaaacgagccgaactcgagttaaaaaaaaagattcgtttcaaactcgagtcgagtttcgagcc 17026069  T
Q  147 gagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccag 210  Q
    || | || |||||||||||||||  ||||||||||| ||| || |||| |||||||||||||||    
T  17026070 gaaccaattcttatcgagtcgagtcgagctcagacaagttcgactcgactcgactcatttccag 17026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 8390111 - 8390245
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  ||||||||||| ||| ||||| | ||||| |||| | ||||  |||||| ||||| |||||| |||||||||||||    
T  8390111 tgaacctaacgagccgaaccgagttgttcgtgaacattaaacgagccaaactcgagctaagaaaaaggtttgtatcgaattcgagttgagtttcgagctg 8390210  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagaca 182  Q
    |||  | |||||||||||||||  |||||||||||    
T  8390211 agccgattcttatcgagtcgagtcgagctcagaca 8390245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 8110949 - 8110793
Alignment:
Q  25 ttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcg 124  Q
    |||||||| || || |||| |||| ||||||| ||| |||| ||||||||| |||||| ||| |||||  |||||| |||||||||||||||| ||||||    
T  8110949 ttatgtgagtttagaaaacgaactaaacctaatgagtcgaatcgaactgtttgtgaactttaaacgagctgaactcgagctgaaaaaagagttcgtgtcg 8110850  T
Q  125 aactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagac 181  Q
    |||||||| |||||||| |||||    || ||||||| ||||||||  |||||||||    
T  8110849 aactcgagccgagtttcaagctggaacaattcttatcaagtcgagccaagctcagac 8110793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 28950264 - 28950363
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctg-aaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||| ||| ||||| ||||||| ||||| |||||| |||| ||||||||||||||    
T  28950264 ttgagcaaccgaactgaacctaacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaaatagttcgtgtcgaactcgag 28950363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 18250619 - 18250765
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcgagtcgagtttcgagct 146  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||| || | || ||||| ||| || || |||||||||| ||||||||||     
T  18250619 tgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactcgagttagagaaaag-gttcgtttcaaactcgagtcaagtttcgagcc 18250717  T
Q  147 gagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcga 194  Q
    || | || |||||||||||||||  ||||||| ||| |||||| ||||    
T  18250718 gaaccaattcttatcgagtcgagtcgagctcaaacaagtttgactcga 18250765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 45054960 - 45054802
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  || |||||||| ||| ||||| ||||||| |||  ||||||  ||| || | |||||||||||||||||| ||| |    
T  45054960 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcaagccg 45054861  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | | || ||||||||||||||||  |||||||||| |     ||||| ||||||||||||||||    
T  45054860 aaccaattcttatcgagtcgagccaagctcagacaag-----ttcgactcgactcatttccagc 45054802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 5795493 - 5795629
Alignment:
Q  62 cgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatc 161  Q
    ||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| |||||||||            |||||| || | || |||||||    
T  5795493 cgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaac------------tcgagccgaaccaattcttatc 5795580  T
Q  162 gagtcgagctgagctcagacatgtttgattcgattcgactcatttccag 210  Q
    ||||||||| |||||||| || ||| ||||||| |||||||||||||||    
T  5795581 gagtcgagccgagctcaggcaggttcgattcgactcgactcatttccag 5795629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 20400339 - 20400209
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||| | ||||||||| ||||||||| ||| ||||| | ||||| |||| ||||| | |||||||||||||||||  |||||||| |||||    
T  20400339 tgaacctaacgagtcaaaccgaactattcgtgaactttaaacgagccaaactcgagctaaaaaatg-gtttgtgtcgaactcgaaccgagtttcaagctg 20400241  T
Q  148 agcaaaatcttatcgagtcgagctgagctcag 179  Q
    | | |||| ||| |||||||||  ||||||||    
T  20400240 aaccaaatattaccgagtcgagtcgagctcag 20400209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 35544142 - 35544287
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||| |||||| |||||||||||| ||| ||||| ||||||| || | | | ||  |||||| || ||||| | ||||||||||||| |    
T  35544142 tgaacctaacgagccaaaccgagctgttcgtgaactttaaacgagccgaactcaag-ttagagaaatgtttgtttcaaactcaaatcgagtttcgagccg 35544240  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcga 194  Q
    | | || ||||||||||||||   |||||||||||||||||| ||||    
T  35544241 aaccaattcttatcgagtcgaatcgagctcagacatgtttgactcga 35544287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 37106339 - 37106146
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaa-aaaagagtttgtg 121  Q
    ||||||| | ||||| ||||| || | ||||||| |||||||||| |||||||||||||| ||| | ||| ||||||  ||||||| |||| | || |||    
T  37106339 agttatgcgctttgaacaaacgaatttaacctaatgagccgaaccaaactgttcgtgaactttaaatgagccgaacttaagctgaaaaaaaaaattcgtg 37106240  T
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctcta 215  Q
    || |||||||  ||||  ||||   |||  || ||||| |||||||||  || |||||||| ||| ||||||| ||||||||||||||||||||    
T  37106239 tcaaactcgaaccgaggctcgaatcgagtcaattcttaacgagtcgagtcgaactcagacaggttcgattcgactcgactcatttccagctcta 37106146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 18740832 - 18740923
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtt 139  Q
    ||||||||||||||||||||||  ||||||||||| ||| ||||||||||||| || | ||||||   ||||| || |||||||||||||||    
T  18740832 tgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagtcgaactcgagtttaaaaaaagatttgtttcaaactcgagtcgagtt 18740923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 45174795 - 45174737
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgag 92  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||| |||||    
T  45174795 ttgagcaaacgaactgaacctaacgagccgaaccgaattgttcgtgaactttaaacgag 45174737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 27232356 - 27232464
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||| | ||||| ||||| || ||||||||| |||||||||| || ||||||||||| ||| ||||| ||||||  ||| ||||||| |||| ||||    
T  27232356 agttatgcgctttgaacaaacgaattgaacctaatgagccgaaccaaattgttcgtgaactttaaacgagccgaacttgagccgaaaaaaaagttcgtgt 27232455  T
Q  123 cgaactcga 131  Q
    | |||||||    
T  27232456 caaactcga 27232464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 41449314 - 41449191
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcgagtcgagtttcgagct 146  Q
    |||| ||||||||  |||||||   |||||||||| ||| |||||  |||||| |||| |||||||| |||||| ||||| ||||||||| ||||||||     
T  41449314 tgaatctaacgagttgaaccgagtagttcgtgaactttaaacgagctgaactcgagctagaaaaaag-gtttgtatcgaattcgagtcgaatttcgagcc 41449216  T
Q  147 gagcaaaatcttatcgagtcgagct 171  Q
    |||| || |||||||||||||||||    
T  41449215 gagccaattcttatcgagtcgagct 41449191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 20259957 - 20260036
Alignment:
Q  102 agctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagac 181  Q
    |||| ||||||||||| |||||||||||||| |||||||  |||||| | || |||||||||||||||  ||||||||||    
T  20259957 agctaaaaaaagagttcgtgtcgaactcgagccgagttttaagctgaaccaattcttatcgagtcgagtcgagctcagac 20260036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 42012253 - 42012320
Alignment:
Q  150 caaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    |||| ||||| |||||||||  ||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  42012253 caaattcttaacgagtcgagtcgagctcagacaagttcgattcgactcgactcatttccagctctaat 42012320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 3941869 - 3941792
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactc 100  Q
    ||||| ||| ||||| ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||||| |||||||    
T  3941869 agttacgtgctttgaacaaacgaaatgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaactc 3941792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 23236755 - 23236878
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcgagtcgagtttcgagct 146  Q
    |||||||||| ||  |||||||   |||||||||| ||| ||||| ||||||| |||| |||||||| ||| || | ||| | ||||||||||||||||     
T  23236755 tgaacctaacaagatgaaccgagtagttcgtgaactttaaacgagccgaactcaagctagaaaaaag-gttcgtattgaatttgagtcgagtttcgagcc 23236853  T
Q  147 gagcaaaatcttatcgagtcgagct 171  Q
    |||| || |||||||||||||||||    
T  23236854 gagctaattcttatcgagtcgagct 23236878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 33899562 - 33899736
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcg 130  Q
    |||||||||||  |  ||||||||||||| ||||||||   |||||||||| ||| ||||| ||||||| |||| |||||||| ||| || | |||| ||    
T  33899562 atttgagcaaatgagttgaacctaacgagtcgaaccgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaaag-gttcgttttgaacccg 33899660  T
Q  131 agtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |  |||||||||||| ||   || |||||||||||||||  ||||| |||||     ||||||| ||||||||||||||||    
T  33899661 aaccgagtttcgagccgaatcaattcttatcgagtcgagtcgagctgagaca-----gattcgactcgactcatttccagc 33899736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 39429627 - 39429503
Alignment:
Q  42 acaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttc 141  Q
    |||||||| ||||||||||  ||||  || || |||| ||| ||| |||||| |||||| || | ||||||||||| ||||||||||||| || ||||||    
T  39429627 acaaactggacctaacgagatgaactaaattgctcgttaactttaaacgagttgaactcgagtttaaaaaagagttcgtgtcgaactcgaatcaagtttc 39429528  T
Q  142 gagctgagcaaaatcttatcgagtc 166  Q
    |||  || | || ||||||||||||    
T  39429527 gagtcgaaccaattcttatcgagtc 39429503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 15433689 - 15433619
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatctcaagtg 225  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||||| ||| ||| |||||    
T  15433689 tcttatcgagtcaagccgagctcaggcaggtttggttcgactcgactcatttccagccctactctgaagtg 15433619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 22074726 - 22074605
Alignment:
Q  50 aacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgag 149  Q
    ||||||||||| ||||||||  ||||||||||  ||| ||||| |||| |  |||   ||||| ||||  | |||||||||||||||||||||||| ||     
T  22074726 aacctaacgagtcgaaccgagttgttcgtgaattttaaacgagccgaatttgagccataaaaaaagttcatatcgaactcgagtcgagtttcgagccgaa 22074627  T
Q  150 caaaatcttatcgagtcgagct 171  Q
    | || |||||||||||| ||||    
T  22074626 ccaattcttatcgagtctagct 22074605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 37401984 - 37402172
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtg 121  Q
    ||||||||| ||||| ||||| || ||||||||| ||| |||||| |||||||||||||| ||| | | | ||||||  ||||  |||||| |||| |||    
T  37401984 agttatgtgctttgaacaaacgaattgaacctaatgagtcgaaccaaactgttcgtgaactttaaaagcgccgaacttgagctaaaaaaaaaagttcgtg 37402083  T
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    || |||| ||  |||  ||||| | |||| || ||||| | |||||||  ||||||| ||| ||| ||||| | ||||||||||||||||    
T  37402084 tcaaactagaaccgaagttcgaaccgagccaattcttaactagtcgagtcgagctcatacaagttcgattc-aatcgactcatttccagc 37402172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 26719325 - 26719225
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcga 131  Q
    |||||||||||  |  ||||||||||||| ||||||||   |||||||||| ||| ||||| ||||||| ||||  ||||| | ||||| ||||||||||    
T  26719325 atttgagcaaatgaggtgaacctaacgagtcgaaccgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaaaactttgtttcgaactcga 26719226  T
Q  132 g 132  Q
    |    
T  26719225 g 26719225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 10618188 - 10618093
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcga 143  Q
    ||||||||||||| ||||| ||  ||||||||||| ||| ||||| ||||||| || | ||||||  |||  | ||| ||||||||||||||||||    
T  10618188 tgaacctaacgaggcgaactgagttgttcgtgaactttaaacgagccgaactcaagttaaaaaaaaggttcatatcgcactcgagtcgagtttcga 10618093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 48633411 - 48633288
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||  |||| |||  || |||||||| ||| ||||| || |||| || | ||||||  ||| || |||||||||||| |||||| ||||||    
T  48633411 tgaacctaacgaatcgaatcgagttgctcgtgaacattaaacgagccggactcgagttaaaaaaaaggttagtatcgaactcgagttgagttttgagctg 48633312  T
Q  148 agcaaaatcttatcgagtcgagct 171  Q
    |||  | || ||||||||||||||    
T  48633311 agctgattcatatcgagtcgagct 48633288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 28950374 - 28950435
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    ||||||||||| |||| |||||||| || ||||| ||||| |||||||||||||||| |||||    
T  28950374 tcttatcgagttgagccgagctcaggca-gtttggttcgactcgactcatttccagccctaat 28950435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 388487 - 388422
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatctc 220  Q
    |||||||||||||| | |||||||| || ||| | ||||| |||||||||||||||| ||| ||||    
T  388487 tcttatcgagtcgaaccgagctcaggcaagttcggttcgactcgactcatttccagccctattctc 388422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 169
Target Start/End: Original strand, 11596405 - 11596521
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  || |||||||| ||| ||||| |||| || |||  ||||||  ||| || | ||||     |||||||||||||||    
T  11596405 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaaatcgagcccaaaaaaaggttcgttttgaac-----tcgagtttcgagctg 11596499  T
Q  148 agcaaaatcttatcgagtcgag 169  Q
    | | || |||||||||||||||    
T  11596500 aaccaattcttatcgagtcgag 11596521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 30919010 - 30918934
Alignment:
Q  135 gagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||||| | || ||||||||||| |||  ||||||||| | ||| | ||||| |||| |||||||||||    
T  30919010 gagtttcgagctgaaccaattcttatcgagttgagtcgagctcagataggttcggttcgactcgattcatttccagc 30918934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 45174697 - 45174641
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||| ||||||||| ||||||||||| ||| | ||||| ||||||||||| ||||    
T  45174697 tcttattgagtcgagccgagctcagacaggttcggttcgactcgactcattttcagc 45174641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 216 - 371
Target Start/End: Complemental strand, 35188325 - 35188170
Alignment:
Q  216 atctcaagtgtcattttagaagtggtggcattagttacggtagcactcgttatgatcatgtggagctcaatgagacgttatgagtttatttccattccta 315  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35188325 atctcaagtgtcattttaggagtggtggcattagttatggtagcactcattatgatcatgtggagctcaatgagacgttatgagtttatttccattccta 35188226  T
Q  316 cggaggaggatgtaagaagagctcgagccctgccgccaccgccatcgctacctttg 371  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35188225 cggaggaggatgtaagaagagcccgagccctgccgccaccgccatcgctacctttg 35188170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 41 - 211
Target Start/End: Complemental strand, 43386708 - 43386538
Alignment:
Q  41 aacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagttt 140  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  43386708 aacaaattgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagtcgaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttt 43386609  T
Q  141 cgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | ||| ||||||| |||||||||||||||  ||||||||||| |||   ||||| ||||||||||||||||    
T  43386608 caagccgagcaaattcttatcgagtcgagtcgagctcagacaggttcagttcgactcgactcatttccagc 43386538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 49820559 - 49820383
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| |||||||||||||||    
T  49820559 ttgagcaaccgaactgaacctaacgagccgaactgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagt 49820460  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccag 210  Q
    |||||||||||| || | || |||||||||||||||| |||||||| || ||| ||||||| |||| ||||||||||    
T  49820459 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcaggttcgattcgactcgattcatttccag 49820383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 34 - 208
Target Start/End: Complemental strand, 50605636 - 50605462
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| || || ||||||| ||||||||||| |||| ||||||||||||||     
T  50605636 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacaagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 50605537  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcc 208  Q
    |||||||||||| || | || |||||||||||||||| ||||||||||| ||| | ||||| |||||||||||||    
T  50605536 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcc 50605462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 19850313 - 19850136
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||     
T  19850313 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 19850214  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | ||   |||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||||    
T  19850213 cgagtttcgagccgaaccaatgtttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccagc 19850136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 216
Target Start/End: Original strand, 28266717 - 28266880
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |    
T  28266717 tgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagtcgaactcgagctaaaaaaagagttcgtgtcgaactcgagtcgagtttcgagccg 28266816  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
    |||||| ||||||| ||||     |||||||||||||||  |||||| ||||||||||| |||| ||||    
T  28266817 agcaaattcttatccagtc-----gagctcagacatgttcaattcgactcgactcattttcagccctaa 28266880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 45 - 211
Target Start/End: Complemental strand, 9469597 - 9469432
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgag 144  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||  ||||||| ||||||||||| |||| |||||||||||||| |||||||||||    
T  9469597 aactgaacctaacgagccgaatcgaactgttcgtgaactttaaacgatccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgag 9469498  T
Q  145 ctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | || | || |||||||||||||||| ||||||||||| ||| || |||| ||||||||||||||||    
T  9469497 ccgaaccaattcttatcgagtcgagccgagctcagacaggttcga-tcgactcgactcatttccagc 9469432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 22183930 - 22183771
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||| || || |||||||||||||||| |||||||||||||||||||||| |||| |    
T  22183930 tgaacctaacgagcggaaccgaactgttcgtgaactttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagttttgagccg 22183831  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttc 207  Q
    |||||| ||||||| |||||| | ||||||||||| ||| | ||||| |||| |||||||    
T  22183830 agcaaattcttatcaagtcgatccgagctcagacaggttcggttcgactcgattcatttc 22183771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 37 - 209
Target Start/End: Original strand, 4275504 - 4275676
Alignment:
Q  37 agcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcga 136  Q
    ||||||| ||||||||| |||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||| ||||||||||||||||||| |||    
T  4275504 agcaaacgaactgaacccaacgagccaaaccgaactattcgtgaactttaaacgagtcgaacccaagctgaaaaaatagtttgtgtcgaactcgagccga 4275603  T
Q  137 gtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |||||||||||| | || |||||||||||||||  |||||||| ||  || || |||| ||| ||||||||||    
T  4275604 gtttcgagctgaaccaattcttatcgagtcgagtcgagctcaggcagattcgactcgactcggctcatttcca 4275676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 34 - 209
Target Start/End: Complemental strand, 21436488 - 21436313
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||  |||||||| |||||     
T  21436488 ttgagcaaccgaactgaacctaacgagccaaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtccgtgtcgaattcgagc 21436389  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |||||||||||| ||   || |||||||||||||||| || |||||||| ||| | ||||| ||||||||||||||    
T  21436388 cgagtttcgagccgaatcaattcttatcgagtcgagccgaactcagacaggttcggttcgactcgactcatttcca 21436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 34 - 209
Target Start/End: Complemental strand, 53369243 - 53369068
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | ||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||     
T  53369243 ttgagcaaccgaactgaacctaacgagccgaaccgaacagttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 53369144  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |||||||||||| || | || ||||||||||| |||| || ||||| ||  || | ||||| ||||||||||||||    
T  53369143 cgagtttcgagccgaaccaattcttatcgagttgagccgaactcaggcagattcggttcgactcgactcatttcca 53369068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 36543475 - 36543365
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||||||||||||||||||     
T  36543475 ttgagcaaacgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtttgtgtcgaactcgagc 36543376  T
Q  134 cgagtttcgag 144  Q
    |||||||||||    
T  36543375 cgagtttcgag 36543365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 79885 - 79764
Alignment:
Q  89 cgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttg 188  Q
    ||||||||| || |||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| || || ||||| ||| |    
T  79885 cgagtcgaa-tcgagctgaaaaaagagttcgtgtcgaactcgagtcgagtttcgaaccgagcaaaatcttatcgagtcgagccgaacttagacaggttcg 79787  T
Q  189 attcgattcgactcatttccagc 211  Q
    |||||||||||||||||||||||    
T  79786 attcgattcgactcatttccagc 79764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 51409087 - 51409221
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||| |||| |||||| |||| ||||||||||||| ||||||||||||| |    
T  51409087 tgaacctaacgagccgagccgaactgtacgtgaactttaaacgagtcgaactcgagctaaaaaaatagttcgtgtcgaactcgaatcgagtttcgagccg 51409186  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagaca 182  Q
    | |||| |||||||||||||||  |||||||||||    
T  51409187 aacaaattcttatcgagtcgagtcgagctcagaca 51409221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 48977185 - 48977008
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | ||||||||||||||||||||||| || ||||||||||  ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||     
T  48977185 ttgagcaaccgaactgaacctaacgagccgaaccaaattgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 48977086  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || ||||||||| |||||| ||| |||| ||  || | ||||| ||||||||||||||||    
T  48977085 cgagtttcgagccgaaccaattcttatcgaatcgagccgagttcaggcagattcggttcgactcgactcatttccagc 48977008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 52813166 - 52813045
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||| |||||| ||||||||||||||||||||| ||| ||||| |||| || |||||||||||||||| ||||||||||||||||||||||| ||| |    
T  52813166 tgaaccgaacgagtcgaaccgaactgttcgtgaactttaaacgaggcgaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagtttcaagccg 52813067  T
Q  148 agcaaaatcttatcgagtcgag 169  Q
    |||||| |||||||||||||||    
T  52813066 agcaaattcttatcgagtcgag 52813045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 44792752 - 44792850
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||    
T  44792752 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgag 44792850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 45674473 - 45674378
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactc 129  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||| ||||||||||| |||| |||||||||||    
T  45674473 ttgagcaaccgaactgaacctaacgagccgaaccgaactattcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactc 45674378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 52705760 - 52705592
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  || |||| ||| ||| ||||| ||||||| |||  ||||||  |||  | |  ||||||| ||||||||||||| |    
T  52705760 tgaacctaacgagccgaaccgagttgctcgtaaactttaaacgagccgaactcgagcccaaaaaaaggttcattttaaactcgaatcgagtttcgagccg 52705661  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
    | | || |||||||||||||||| ||||||||||| ||| || |||| |||||||||||||||| ||||    
T  52705660 aaccaattcttatcgagtcgagccgagctcagacaagttcgactcgactcgactcatttccagccctaa 52705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 55892665 - 55892807
Alignment:
Q  62 cgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatc 161  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||| ||||||||||||||       |||||| ||||||| |||||||    
T  55892665 cgaaccgaactgtacgtgtactttaaacgagtcgaactcgagctaaaaaaatagttcgtgtcgaactcgag-------tcgagccgagcaaattcttatc 55892757  T
Q  162 gagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||  ||||||||| |  || ||||||| ||||||||||||||||    
T  55892758 gagtcgagtcgagctcagatagattcgattcgactcgactcatttccagc 55892807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 36156858 - 36156963
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||||||||||||  ||||||||||| |||| ||||    
T  36156858 agttatgtgctttgaacaaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagtcgaacttgagctgaaaaaaaagttcgtgt 36156957  T
Q  123 cgaact 128  Q
    | ||||    
T  36156958 caaact 36156963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 54742277 - 54742089
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagag--tttgt 120  Q
    ||||||||| ||||| ||||| || ||||||| | ||| |||||| |||||||||||||| ||| ||||  ||||||| ||||||||||| |   || ||    
T  54742277 agttatgtgctttgaacaaacgaattgaacctgatgagtcgaaccaaactgttcgtgaactttaaacgaaccgaactcgagctgaaaaaaaaaaattcgt 54742178  T
Q  121 gtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    ||  ||||||| | ||| ||||  | |||| || ||||| |||||| ||  ||||||||||| ||||||||||| ||||||||||||||    
T  54742177 gttaaactcgaattgaggttcggaccgagccaattcttaacgagtcaagtcgagctcagacaggtttgattcgaatcgactcatttcca 54742089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 7505513 - 7505428
Alignment:
Q  126 actcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||||||||||| ||   || |||||||||||||||| ||||||||||| ||| || |||| ||||||||||||||||    
T  7505513 actcgagtcgagtttcgagccgaatcaattcttatcgagtcgagccgagctcagacaagttcgactcgactcgactcatttccagc 7505428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 51994176 - 51994087
Alignment:
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||||||||||||||||||||| | || ||||| |||||||||  ||||||||||   || ||||||| ||||||||||||||||    
T  51994176 tcgaactcgagtcgagtttcgagctgaaccaattcttaacgagtcgagtcgagctcagacggattcgattcgactcgactcatttccagc 51994087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 44377772 - 44377649
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcgagtcgagtttcgagct 146  Q
    |||||||||||||||||||| |  ||||||||||| ||| ||||| ||||||| || | || ||||| ||| || || |||||||||||||||||||||     
T  44377772 tgaacctaacgagccgaaccaagttgttcgtgaactttaaacgagccgaactcaagttagagaaaag-gttcgtttcaaactcgagtcgagtttcgagcc 44377674  T
Q  147 gagcaaaatcttatcgagtcgagct 171  Q
    || | || |||||||||||||||||    
T  44377673 gaaccaattcttatcgagtcgagct 44377649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 12790122 - 12790220
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | ||||||||||||||||||||     ||||||||||||| ||| ||||| ||||||| || |||||||| |||| ||||||||||||||     
T  12790122 ttgagcaaccgaactgaacctaacgagccga-----actgttcgtgaactttaaacgagccgaactcgagttgaaaaaatagttcgtgtcgaactcgagc 12790216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 52813054 - 52812976
Alignment:
Q  128 tcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    |||||||||||||| ||| ||||||| |||||||||||||||| || |||||||| ||| | ||||| |||||||||||    
T  52813054 tcgagtcgagtttcaagccgagcaaattcttatcgagtcgagccgaactcagacaggttcggttcgactcgactcattt 52812976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 43812624 - 43812732
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||  | || ||||||||| |||||||||| |||||||||||||| ||| ||||| ||||||  || |||||||| ||||| |||    
T  43812624 agttatgtgttttgaacagtcgaaatgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaacttgagatgaaaaaaaagtttctgt 43812723  T
Q  123 cgaactcga 131  Q
    | |||||||    
T  43812724 caaactcga 43812732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 206
Target Start/End: Original strand, 48340194 - 48340373
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtg 121  Q
    ||||||||| ||||| ||||| || |||| |||| ||| |||||| ||||||| |||||| ||| ||||||||||||  ||||  |||||| |||| |||    
T  48340194 agttatgtgctttgaacaaacgaattgaatctaatgagtcgaaccaaactgtttgtgaactttaaacgagtcgaacttaagctcaaaaaaaaagttcgtg 48340293  T
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    || ||||||| ||||  ||||| |  ||| || |||||  |||||     || |||||||||||||||||||| |||||||||||    
T  48340294 tcaaactcgaatcgaagttcgaaccaagccaattcttaatgagtc-----gaactcagacatgtttgattcgactcgactcattt 48340373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 24009418 - 24009535
Alignment:
Q  63 gaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcg 162  Q
    |||||||||||||||||||| ||| |||||  |||||| |||| ||||||  ||| || | |||||||||||| |||||||| ||| | || ||||||||    
T  24009418 gaaccgaactgttcgtgaactttaaacgagcagaactcgagctaaaaaaaaggttcgttttgaactcgagtcgggtttcgagttgaaccaattcttatcg 24009517  T
Q  163 agtcgagctgagctcaga 180  Q
    | ||| |  |||||||||    
T  24009518 aatcgtgtcgagctcaga 24009535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 22720836 - 22720748
Alignment:
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||  ||||||||||||| || | || ||||||||||| |||| ||||||||||  ||| ||||||| |||| |||||||||||    
T  22720836 cgaactcgtatcgagtttcgagccgaaccaattcttatcgagttgagccgagctcagactagttcgattcgactcgattcatttccagc 22720748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 182
Target Start/End: Original strand, 46945150 - 46945282
Alignment:
Q  50 aacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgag 149  Q
    ||||||||||||||||||||  |||||   ||  ||| ||||| |||| || || | ||||||  |||||| || ||||||||||||||||||||| ||     
T  46945150 aacctaacgagccgaaccgagttgttcacaaattttaaacgagccgaattcgagttaaaaaaaaggtttgtttcaaactcgagtcgagtttcgagccgaa 46945249  T
Q  150 caaaatcttatcgagtcgagctgagctcagaca 182  Q
    | || ||||||||||| |||  |||||||||||    
T  46945250 ccaattcttatcgagttgagtcgagctcagaca 46945282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 50240908 - 50241036
Alignment:
Q  89 cgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttg 188  Q
    |||| ||||| | |||| ||||||  |||||| |||||||||||| |||||||||||||| | || | ||| |||||||||  |||||||||   ||| |    
T  50240908 cgagccgaacacgagctaaaaaaaaggtttgtttcgaactcgagtagagtttcgagctgaaccaatttttaacgagtcgagtcgagctcagatgcgttcg 50241007  T
Q  189 attcgattcgactcatttccagctctaat 217  Q
    ||| || ||| |||||||||||| |||||    
T  50241008 atttgactcggctcatttccagccctaat 50241036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 48731978 - 48732025
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgag 92  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||||    
T  48731978 aactgaacctaacaagccgaaccgaactgttcgtgaatcttaaacgag 48732025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 25134026 - 25133937
Alignment:
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||||  || ||||||||| || | || |||||||||||||||  |||||||||||  || || |||| ||||||||||||||||    
T  25134026 tcgaactcgaaccgggtttcgagccgaaccaattcttatcgagtcgagtcgagctcagacagattcgactcgactcgactcatttccagc 25133937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 32398350 - 32398517
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctg-aaaaaagagtttgtgtcgaactcgagtcgagtttcgagct 146  Q
    ||||||||| || ||||||| ||||||||||||||  || ||||| ||||||  ||||| |||||| | ||  |||| |||||||  |||| ||||| |     
T  32398350 tgaacctaatgaaccgaaccaaactgttcgtgaactctaaacgagccgaacttgagctgaaaaaaaaaattcatgtcaaactcgaaccgaggttcgaacg 32398449  T
Q  147 gagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatct 219  Q
    |||| || | ||| |||||||||  ||||||||||| |     ||||| |||||||||||||||| |||||||    
T  32398450 gagccaatttttaacgagtcgagtcgagctcagacaag-----ttcgactcgactcatttccagccctaatct 32398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 44792861 - 44792917
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||||||| ||||||| ||| ||| | ||||| ||||||||||||||||    
T  44792861 tcttatcgagtcgagccgagctcatacaggttcggttcgactcgactcatttccagc 44792917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 16743092 - 16743215
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||||| ||| |||| ||||  ||||||||||| |||  | |||||||||| || | ||||||  ||| ||  | |||| |||||||||||||||| |    
T  16743092 tgaacctaccgaaccgagccgagttgttcgtgaactttaatcaagtcgaactcaagttaaaaaaatggttcgtaacaaacttgagtcgagtttcgagccg 16743191  T
Q  148 agcaaaatcttatcgagtcgagct 171  Q
    | | || |||||||||||||||||    
T  16743192 aaccaattcttatcgagtcgagct 16743215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 49378170 - 49378225
Alignment:
Q  153 aatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcc 208  Q
    ||||||||||| |||||| ||||||||||| ||| | ||||| |||||||||||||    
T  49378170 aatcttatcgattcgagccgagctcagacaggttcggttcgactcgactcatttcc 49378225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 6874934 - 6874988
Alignment:
Q  58 gagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaa 112  Q
    |||||||||| ||||||| |||||| |||  |||||||||||| |||||||||||    
T  6874934 gagccgaaccaaactgtttgtgaactttaagcgagtcgaactcgagctgaaaaaa 6874988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 45674364 - 45674310
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |||||||||||||||| |||||||| || ||| | ||||| ||||||||||||||    
T  45674364 tcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttcca 45674310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 40797245 - 40797160
Alignment:
Q  124 gaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    ||||||||| |  ||||||||| || | || |||||||||||||||  |||||||||||  || || |||| ||||||||||||||    
T  40797245 gaactcgagccatgtttcgagccgaaccaattcttatcgagtcgagtcgagctcagacagattcgactcgactcgactcatttcca 40797160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 1803327 - 1803239
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcga 143  Q
    ||||||| |||||||||| || |||||| ||| ||||  ||||||| |||| ||||||  ||| |  ||||||||||||| ||||||||    
T  1803327 aacgagctgaaccgaactcttagtgaactttaaacgaaccgaactcgagcttaaaaaaaggttcgcttcgaactcgagtcaagtttcga 1803239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 12790226 - 12790282
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||| |||||| ||||||||||| ||| | ||||| ||||||||||| ||||    
T  12790226 tcttatcgaatcgagccgagctcagacaggttcggttcgactcgactcattttcagc 12790282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 5e-72; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 1224757 - 1224568
Alignment:
Q  22 tagttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||||| |||    
T  1224757 tagttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttaaacgagtcgaactcgagcggaataaagagttcgtg 1224658  T
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||| ||||| ||||| ||| ||||||||||||||||||| ||||    
T  1224657 tcgaactcgagtcgagtttcgagtcgagcaaaatcttattgagtcgagccgagcttagacaggttcgattcgattcgactcattttcagc 1224568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 211
Target Start/End: Original strand, 32157344 - 32157521
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||     
T  32157344 ttgagcaaacgaactgaatctaacgagccgaaccgaactggtcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 32157443  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||||| || | || |||||||||||||||| |||| |||||| |||   ||||| ||||||||||||||||    
T  32157444 caagtttcgagccgaaccaattcttatcgagtcgagccgagcccagacaggttcagttcgactcgactcatttccagc 32157521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 43385987 - 43385802
Alignment:
Q  27 atgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaaga-gtttgtgtcga 125  Q
    |||||||||||  |||| ||||||||||| |||||||||| ||||| ||||||||| ||| ||||| ||||||| ||||||||||| | |||||||||||    
T  43385987 atgtgatttgaataaacgaactgaacctatcgagccgaactgaactattcgtgaactttaaacgagccgaactcaagctgaaaaaaaaagtttgtgtcga 43385888  T
Q  126 actcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||| ||||||||||||||| | || |||||||||||||||| ||||||||||  ||| || |||| ||| | ||||||||||    
T  43385887 actcgagccgagtttcgagctgaaccaattcttatcgagtcgagccgagctcagacgagttcgactcgactcggcacatttccagc 43385802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 206
Target Start/End: Complemental strand, 18879801 - 18879629
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||| ||||||||||| |||| ||||||||||||||     
T  18879801 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaatgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 18879702  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    | |||||||||| || | || |||||||||||||||| || ||||||||  || | ||||| |||||||||||    
T  18879701 caagtttcgagccgaaccaattcttatcgagtcgagccgaactcagacagattcggttcgactcgactcattt 18879629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 27905650 - 27905479
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgag 144  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||  |||||||||| |||| |||||||||||||| ||||||||| |    
T  27905650 aactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaattcgggctgaaaaaatagttcgtgtcgaactcgagccgagtttcgtg 27905551  T
Q  145 ctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
    | || | || ||||||| |||||||| ||||||||| | ||| | ||||| |||||||||||||||| ||||    
T  27905550 ccgaaccaattcttatcaagtcgagccgagctcagataagttcggttcgactcgactcatttccagccctaa 27905479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 15932129 - 15931983
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||| ||||  ||||||| ||  |||||||||||| ||||    
T  15932129 agttatgtgatttgaacaaacgaactgaacctatcgagccgaaccgaactgttcgtgaactttaaacgaaccgaactcgagtcgaaaaaagagttcgtgt 15932030  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgag 169  Q
     ||||||||  |||||||| |||||| | || |||||||||||||||    
T  15932029 tgaactcgaaccgagtttcaagctgaaccaattcttatcgagtcgag 15931983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 5385062 - 5385225
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||| |||| ||||||||||||| ||||||||||| ||| ||||||||||||| |||| ||||||||||| |||| ||||||||||| |||||||||| |    
T  5385062 tgaatctaatgagccgaaccgaattgttcgtgaactttaaacgagtcgaactcgagctaaaaaaagagttcgtgttgaactcgagtcaagtttcgagccg 5385161  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||| | | ||||| ||||   ||||||||| | ||| ||||||| ||||||||||||||||    
T  5385162 aacaaattttaatcgaatcgaatcgagctcagaaaagttcgattcgactcgactcatttccagc 5385225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 1840958 - 1841113
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    |||||||||||| ||  ||||||||||| ||| ||||| ||||||| || | ||||||| ||| || |||||||||||||||||||||||| || | ||     
T  1840958 aacgagccgaac-gagttgttcgtgaactttaaacgagccgaactcgagttaaaaaaagggttcgtatcgaactcgagtcgagtttcgagccgaaccaat 1841056  T
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||||||  ||||||||||| ||||| ||||| ||||||||||||||||    
T  1841057 tcttatcgagtcgagtcgagctcagacaggtttggttcgactcgactcatttccagc 1841113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 3805393 - 3805509
Alignment:
Q  95 gaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcga 194  Q
    |||||| ||||||||||| |||| |||||||||||||| |||||||||||| || | || |||||||||||||||| ||||||||||| ||| | |||||    
T  3805393 gaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcggttcga 3805492  T
Q  195 ttcgactcatttccagc 211  Q
     ||||||||||||||||    
T  3805493 ctcgactcatttccagc 3805509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 27450970 - 27451124
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    ||||||| |||||||||||||||||||| ||| ||||| ||||||| || | ||||||  ||| |  |||||||||||| ||||||||||| || | ||     
T  27450970 aacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagtttaaaaaaatgttcgcttcgaactcgagttgagtttcgagccgaaccaat 27451069  T
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    ||||||||||||||   ||||||||||| |||||| |||| ||||||||||||||    
T  27451070 tcttatcgagtcgaatcgagctcagacaggtttgactcgactcgactcatttcca 27451124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 29322232 - 29322134
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | ||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||    
T  29322232 ttgagcaaccgaactgaacctaacgagccgaaccgaacagttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgag 29322134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 34720043 - 34720199
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    ||||||| |||||||||||||||||||| ||| |||||  |||||| |||| |||||| |||| |  |||||||||||||||||||||| | || | ||     
T  34720043 aacgagctgaaccgaactgttcgtgaactttaaacgagctgaactcgagcttaaaaaaaagttcgcttcgaactcgagtcgagtttcgaaccgaaccaat 34720142  T
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||||||||   |||||| |||| ||| || |||| ||||||||||||||||    
T  34720143 tcttatcgagtcgaatcgagctcggacaggttcgactcgactcgactcatttccagc 34720199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 22921612 - 22921509
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| || |||||||| |||| |||||||| |||||     
T  22921612 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagatgaaaaaatagttcgtgtcgaattcgagc 22921513  T
Q  134 cgag 137  Q
    ||||    
T  22921512 cgag 22921509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 206
Target Start/End: Complemental strand, 26299606 - 26299455
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    ||||||| |||||||||||||||||||| ||| ||||| ||||||| || | ||||||  |||    |||||||||||||||||||||||| || | ||     
T  26299606 aacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagtttaaaaaaaggttcacttcgaactcgagtcgagtttcgagccgaaccaat 26299507  T
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    ||||||||||||||   ||||||||||| |||||| |||| |||||||||||    
T  26299506 tcttatcgagtcgaatcgagctcagacaagtttgactcgactcgactcattt 26299455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 4983938 - 4984072
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  || |||||||| ||| ||||| ||||||| |||  ||||||  ||| || | |||||||||||||||||| |||||    
T  4983938 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcaagctg 4984037  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagaca 182  Q
    | | || |||||||||||||||| |||||||||||    
T  4984038 aaccaattcttatcgagtcgagccgagctcagaca 4984072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 38523227 - 38523313
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcga 131  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||| ||||||||||| |||| |||||||||||||    
T  38523227 aactgaacctaacgagccgaaccaaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcga 38523313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 31620154 - 31620005
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctg-aaaaaagagtttgtg 121  Q
    |||||||| ||||||| || | |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||  || || |||||| || | |||    
T  31620154 agttatgtaatttgagaaatcgaactaaacctaacgagccgaaccgaattgttcgtgaaccttaaacgagtcgaacttgagttgaaaaaaaaagctcgtg 31620055  T
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    || |||| ||  ||||||| ||||||| | |||||||||||| |||||||    
T  31620054 tcaaacttgaaccgagttttgagctgaaccaaatcttatcgaatcgagct 31620005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 39408879 - 39408766
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    ||||||| |||||||||||||||||||| ||| ||||| ||||||| |||| |||||| |||| |  |||||||||||||||||||||||| || | ||     
T  39408879 aacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagcttaaaaaaaagttcgcttcgaactcgagtcgagtttcgagccgaaccaat 39408780  T
Q  155 tcttatcgagtcga 168  Q
    ||||||||||||||    
T  39408779 tcttatcgagtcga 39408766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 34724019 - 34724175
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    ||||||| ||||||||||||||||||||  || |||||  |||||| |||| ||||||  ||| |  |||||||||||||||||||||| |||| | ||     
T  34724019 aacgagctgaaccgaactgttcgtgaactctaaacgagctgaactcgagcttaaaaaaaggttcgcttcgaactcgagtcgagtttcgaactgaaccaat 34724118  T
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||||||||   |||||| |||| ||| || |||| ||||||||||||||||    
T  34724119 tcttatcgagtcgaatcgagctcggacaggttcgactcgactcgactcatttccagc 34724175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 211
Target Start/End: Complemental strand, 26298065 - 26297909
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    ||||||| |||||||||| ||||||||| ||| ||||| ||||||| || | ||||||  ||| |  |||||||||| ||||||||||||| || | ||     
T  26298065 aacgagctgaaccgaactattcgtgaactttaaacgagccgaactcgagtttaaaaaaaggttcgcttcgaactcgaatcgagtttcgagccgaaccaat 26297966  T
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||||||||   ||||||| ||| |||||| | |||||||||||||| ||||    
T  26297965 tcttatcgagtcgaatcgagctcacacaggtttgacttgattcgactcattttcagc 26297909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 211
Target Start/End: Complemental strand, 10493557 - 10493383
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcga 131  Q
    |||||||||||| |  ||||||||| ||| |||| |||  || |||||||| ||| ||||| ||||||  || ||||||||  ||| || ||||||||||    
T  10493557 atttgagcaaacgagttgaacctaatgagtcgaatcgagttgctcgtgaactttaaacgagccgaacttgagttgaaaaaaaggttcgtttcgaactcga 10493458  T
Q  132 gtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||||| || | |  |||||||||||||     |||||||||| ||| ||||||| ||||||||||||||||    
T  10493457 gtcgagtttcgagccgaaccatttcttatcgagtcg-----agctcagacaggttcgattcgactcgactcatttccagc 10493383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 11136636 - 11136799
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  || |||||||| ||| ||||  ||| ||| |||  ||||||  ||| || | |||||||||||||||||||||| |    
T  11136636 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgaaccgagctcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 11136735  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |  | ||||||||| |||||| ||| ||||||| ||| || |||| ||||||||||||||||    
T  11136736 aacctattcttatcgaatcgagccgagttcagacaagttcgactcgactcgactcatttccagc 11136799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 19283558 - 19283720
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||| |||| ||| ||||||||  ||||||||||| ||| |  ||| |||||| || | ||||||| ||| || |||||||||||||||||||||||||     
T  19283558 tgaatctaatgagtcgaaccgagttgttcgtgaactttaaatcagtagaactcgagttaaaaaaag-gttcgtatcgaactcgagtcgagtttcgagcta 19283656  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | | || |||||||||||||||  ||||||||| | ||| ||||| | ||||||||||||||||    
T  19283657 aaccaattcttatcgagtcgagtcgagctcagataagttcgattctactcgactcatttccagc 19283720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 26217590 - 26217419
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||||||||| |||||||||  |  |||||||| ||| ||||| ||||||  |||  ||||||  ||| || | |||||||||||||||||||||| |    
T  26217590 tgaacctaacgaaccgaaccgagtttctcgtgaactttaaacgagccgaactggagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 26217491  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatct 219  Q
    | | || |||||| ||||||| | ||||||||||| ||| || |||| |||||||||||||| | |||||||    
T  26217490 aaccaattcttattgagtcgaaccgagctcagacaagttcgactcgactcgactcatttccaaccctaatct 26217419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 39407141 - 39407028
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    ||||||| |||||||||||||||||||| ||| ||||| ||||||| |||| |||||| ||||    |||||||||||||||||||||| | || | ||     
T  39407141 aacgagctgaaccgaactgttcgtgaactttaaacgagccgaactcgagcttaaaaaaaagttcacttcgaactcgagtcgagtttcgaaccgaaccaat 39407042  T
Q  155 tcttatcgagtcga 168  Q
    ||||||||||||||    
T  39407041 tcttatcgagtcga 39407028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 2675492 - 2675306
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| || ||||||||| ||||||| || |||||||||||||| ||| ||||||||||||| ||||||||||| |||| || |    
T  2675492 agttatgtgctttgaacaaacgaattgaacctaatgagccga-ccaaactgttcgtgaactttaaacgagtcgaactcgagctgaaaaaa-agttcgtat 2675395  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | | |||||  |||  ||||| | |||| || ||||| ||| |||||  || || ||||| ||| ||||||| ||| ||||||||||||    
T  2675394 caagctcgaaccgaagttcgaaccgagccaattcttaacgaatcgagtcgaacttagacaagttcgattcgactcggctcatttccagc 2675306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 20188542 - 20188354
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| ||  |||| ||| |||||||||| |||||||||||||| ||| |||||  |||||  || || ||||| |||| ||||    
T  20188542 agttatgtgctttgaacaaacgaatcgaacttaatgagccgaaccaaactgttcgtgaactttaaacgagcggaacttgagttggaaaaaaagttcgtgt 20188443  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||  |||| ||||| | || |||| |||||  ||||||||  || |||||||| ||| ||||||| | ||||||||||||||    
T  20188442 caaactcgatccgagattcgaaccgaacaaattcttaatgagtcgagtcgaactcagacaagttcgattcgacttgactcatttccagc 20188354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 27195590 - 27195426
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcgagtcgagtttcgagct 146  Q
    ||||||||||||  | |||||| |||||||||||| ||| ||||| ||||||| || | || ||||| ||| || || ||||||||| |||||||||||     
T  27195590 tgaacctaacgaatcaaaccgagctgttcgtgaactttaaacgagccgaactcgagttagagaaaag-gttcgtttcaaactcgagtagagtttcgagcc 27195492  T
Q  147 gagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    || | || |||||| ||||||||  |||||||||||||     ||||| |||||||||||||||| |||||    
T  27195491 gaaccaattcttattgagtcgagtcgagctcagacatg-----ttcgactcgactcatttccagccctaat 27195426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 41782861 - 41782764
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagc 145  Q
    ||||||||||||||||||||||  || |||||||| ||| ||||| ||||||| |||  ||||||  ||| || | ||||||||||||||||||||||    
T  41782861 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagc 41782764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 20191182 - 20191340
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||| | ||||| ||||| || ||||||||| |||||||||| ||||||| |||||| ||| ||||| ||||||  ||||||||||| || | ||||    
T  20191182 agttatgcgctttgaacaaacgaattgaacctaatgagccgaaccaaactgtttgtgaactttaaacgagccgaacttgagctgaaaaaaaagctcgtgt 20191281  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagaca 182  Q
    | ||||| |  |||  ||||| | |||| || ||||| ||| ||||| ||||||||||||    
T  20191282 caaactcaaaccgaagttcgaac-gagctaattcttaacgaatcgagttgagctcagaca 20191340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 28242550 - 28242396
Alignment:
Q  50 aacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgag 149  Q
    ||||||||||| |||| |||  ||||||||||| ||| | ||| ||||||| || | || |||  |||||| || ||||||| |||||||||||||  |     
T  28242550 aacctaacgagtcgaatcgagttgttcgtgaactttaaatgagccgaactcaagttaaagaaaaggtttgtttcaaactcgattcgagtttcgagccaaa 28242451  T
Q  150 caaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    | || ||||||| | || ||||     |||||||||||||||||||||||||||||||||    
T  28242450 ccaattcttatctaatcaagct-----cagacatgtttgattcgattcgactcatttcca 28242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 210
Target Start/End: Complemental strand, 34857102 - 34856951
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaa 154  Q
    ||||||| ||||||||||||||||||||     ||||| ||||||| | || ||||||  ||| |  ||||||||||||| |||||||||| || | ||     
T  34857102 aacgagctgaaccgaactgttcgtgaaca----acgagccgaactcgaacttaaaaaaatgttcgcttcgaactcgagtcaagtttcgagccgaaccaat 34857007  T
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccag 210  Q
    ||||||||||||||   || ||||||||  || || |||| |||||||||||||||    
T  34857006 tcttatcgagtcgaatcgaactcagacagattcgactcgactcgactcatttccag 34856951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 19715921 - 19715806
Alignment:
Q  66 ccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagt 165  Q
    ||||||| ||||||||| ||| ||||| ||||||| || | ||||||| ||| |  |||||||||||||||||||||||| || | || | |||||||||    
T  19715921 ccgaactattcgtgaactttaaacgagccgaactcgagtttaaaaaag-gttcgcttcgaactcgagtcgagtttcgagccgaaccaattattatcgagt 19715823  T
Q  166 cgagctgagctcagaca 182  Q
    |||   |||||||||||    
T  19715822 cgaatcgagctcagaca 19715806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 14501398 - 14501480
Alignment:
Q  127 ctcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    ||||||||||||||||||| || |  | |||||||||||||||| |||||||||||  || || ||||  |||||||||||||    
T  14501398 ctcgagtcgagtttcgagccgaaccgattcttatcgagtcgagccgagctcagacaaattcgactcgacgcgactcatttcca 14501480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 29322123 - 29322061
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    |||||||||||||||| |||||||| || ||| | ||||| |||||||||||||||| |||||    
T  29322123 tcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagccctaat 29322061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 28430642 - 28430593
Alignment:
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    ||||||||||||||||||| ||||||| | || |||||||||||||||||    
T  28430642 tcgaactcgagtcgagttttgagctgaactaattcttatcgagtcgagct 28430593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 38523335 - 38523386
Alignment:
Q  160 tcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||||| ||||||||||| ||| | ||||| ||||||||||||||||    
T  38523335 tcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccagc 38523386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 13937226 - 13937310
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    ||||||||||||| ||||||||   ||| |||||| ||| ||||| ||||||| ||||  |||||  |||||| |||||||||||    
T  13937226 tgaacctaacgagtcgaaccgagtggtttgtgaactttaaacgagccgaactcgagctagaaaaaatgtttgtttcgaactcgag 13937310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 22563451 - 22563267
Alignment:
Q  22 tagttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtg 121  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||    
T  22563451 tagttatgtgatttgagcaaacaaattgaacctaacgaaccgaaccgaactgttcgtgaaccttaaacgagtcgaactcgagctgaaaaaagagttcgtg 22563352  T
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||     ||||||||||||||||||||||||    
T  22563351 ttgaactcgagtcgagtttcgagccgagcaaaatcttatcgagttgagccgagctcagaca-----gattcgattcgactcatttccagc 22563267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 206
Target Start/End: Complemental strand, 11161230 - 11161087
Alignment:
Q  63 gaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcg 162  Q
    |||||||||||||||||||| ||| |||||  |||||| ||||||||||| |||| ||| |||||||||| |||| ||||||| || | || ||||||||    
T  11161230 gaaccgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtggcgaactcgagccgaggttcgagccgaaccaattcttatcg 11161131  T
Q  163 agtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    ||| |||| |||||||| || ||  | ||||| |||||||||||    
T  11161130 agtggagccgagctcaggcaggtccggttcgactcgactcattt 11161087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 43967049 - 43966891
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  || |||||||| ||| ||||| ||||||| |||  |||||| | || || | |||||||||||||||||||||| |    
T  43967049 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaaattcgttttgaactcgagtcgagtttcgagccg 43966950  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | | || |||||||||||||||| ||| ||||||| |     ||||| ||||||||||||||||    
T  43966949 aaccaattcttatcgagtcgagccgagttcagacaag-----ttcgactcgactcatttccagc 43966891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 33280588 - 33280772
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||  ||||| ||||| |||||||||||| |||||||||| || ||||||||||| ||| | ||||||||||  ||||||||||||  || ||||    
T  33280588 agttatgtcctttgaacaaacgaactgaacctaatgagccgaaccaaattgttcgtgaactttaaatgagtcgaacttgagctgaaaaaag--ttcgtgt 33280685  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    | |||||||   ||| ||| | |||| | || ||| | |||||||||  || |||||||| ||| ||||||| ||||||||||||||    
T  33280686 caaactcgaactgaggttctaactgatccaattctaaacgagtcgagtcgaactcagacaggttcgattcgactcgactcatttcca 33280772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 22930869 - 22930979
Alignment:
Q  95 gaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcga 194  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||| || | || ||||||||||||||| |     |||||| ||| | |||||    
T  22930869 gaactcgagctgaaaaaatagtttgtgtcgaactcgagccgagtttcgagccgaaccaattcttatcgagtcgagtt-----cagacaggttcggttcga 22930963  T
Q  195 ttcgactcatttccag 210  Q
     |||||||||||||||    
T  22930964 ctcgactcatttccag 22930979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 211
Target Start/End: Original strand, 9413262 - 9413400
Alignment:
Q  73 gttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctg 172  Q
    |||||||||| ||| | ||| ||||||  |||| ||||||  ||| ||||||||||| ||||||||||||||| || | |  |||||||||||||||  |    
T  9413262 gttcgtgaactttaaatgagccgaacttgagctaaaaaaaaggttcgtgtcgaactcaagtcgagtttcgagccgaaccatttcttatcgagtcgagtcg 9413361  T
Q  173 agctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||| |||   ||||| ||||||||||||||||    
T  9413362 agctcagacaagttcagttcgactcgactcatttccagc 9413400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 15211859 - 15212001
Alignment:
Q  29 gtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaact 128  Q
    |||||| ||||||  |||||||||||||||||||||| |||  |||| ||||||   |  ||||||||  || |||| |||||| |||||||  ||||||    
T  15211859 gtgattcgagcaactaaactgaacctaacgagccgaatcgagttgttagtgaactcaaaccgagtcgagttcgagctaaaaaaaaagtttgtaacgaact 15211958  T
Q  129 cgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    |||| ||||||||||||| | | ||||||||| ||||||||||    
T  15211959 cgagccgagtttcgagctaaaccaaatcttatggagtcgagct 15212001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 23180941 - 23180748
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||  | || ||||||||| |||||||||| |||||||||| ||| ||| ||||||||||||  || |||||||| ||||  |||    
T  23180941 agttatgtgttttgaacagtcgaaatgaacctaatgagccgaaccaaactgttcgtaaactttaaacgagtcgaacttgagatgaaaaaaaagttcctgt 23180842  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatctta-----tcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||  |||| ||||| | || |||| |||||     ||||||||||  ||||||| ||||||| ||||||| |||| | |||||||||    
T  23180841 caaactcgaaccgaggttcgaaccgaacaaattcttaacgagtcgagtcgagtcgagctcatacatgttcgattcgactcgaataatttccagc 23180748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 1091236 - 1091164
Alignment:
Q  58 gagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcga 131  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||| | || ||||||||||| |||||||||||||    
T  1091236 gagccgaactgaactgttcgtgaactttaaacgagtcgaactcaaact-aaaaaagagttcgtgtcgaactcga 1091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 12377886 - 12377754
Alignment:
Q  50 aacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgag 149  Q
    ||||||| |||  |||||||  |||| |||||| ||| |||||  |||||| || | |||||| |||| || |||||||||||||||||||||||||||     
T  12377886 aacctaatgagtggaaccgagttgtttgtgaactttaaacgagatgaactcgagttaaaaaaatagttcgtttcgaactcgagtcgagtttcgagctgaa 12377787  T
Q  150 caaaatcttatcgagtcgagctgagctcagaca 182  Q
    || | ||||||||| |||||  ||| |||||||    
T  12377786 cacattcttatcgaatcgagtcgagttcagaca 12377754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 25731827 - 25731950
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||||| |||||||||| ||  | ||||||||| ||| | ||| ||||||| || | ||||||| |||||  ||||||| ||||||| |||||||| |    
T  25731827 tgaacctaccgagccgaactgagtttttcgtgaactttaaatgagccgaactcaagttaaaaaaagggtttgcatcgaacttgagtcgactttcgagccg 25731926  T
Q  148 agcaaaatcttatcgagtcgagct 171  Q
    | | || |||||||||||||||||    
T  25731927 aaccaattcttatcgagtcgagct 25731950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 17865720 - 17865769
Alignment:
Q  121 gtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagc 170  Q
    |||||||||||||||||||||||||||| | || ||||||||||| ||||    
T  17865720 gtcgaactcgagtcgagtttcgagctgaaccaattcttatcgagttgagc 17865769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 17865650 - 17865694
Alignment:
Q  25 ttatgtgatttgagcaaacaaactgaacctaacgagccgaaccga 69  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  17865650 ttatgtgattcgagcaaacaaattgaacctaacgagtcgaaccga 17865694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 27189633 - 27189689
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||| |||||||||  ||||||||||| ||| ||||||| ||||||||||||||||    
T  27189633 tcttaacgagtcgagtcgagctcagacaagttcgattcgactcgactcatttccagc 27189689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 453119 - 453061
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgag 92  Q
    |||||||| | |||||||||||| || ||||||| |||||||||||||| ||| |||||    
T  453119 ttgagcaaccgaactgaacctaatgaaccgaaccaaactgttcgtgaactttaaacgag 453061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 18962026 - 18961849
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||  |||||||||| |||||||||||||||||||     
T  18962026 ttgagcaaccaaactgaacctagcgagccgaaccgaactgttcgtgaactttaaacgagtcgaactcgggctgaaaaaatagtttgtgtcgaactcgagc 18961927  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || |||||||||||||||| |||||||| || ||| |||| || ||||||||||||||||    
T  18961926 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcaggttcgatttgactcgactcatttccagc 18961849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 7957235 - 7957052
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||| ||| |||||  |||||| ||||||||||| |||| |||| |||||||||     
T  7957235 ttgagaaaacgaactaaacctaacgagccgaaccgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtgttgaactcgagc 7957136  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    |||||||||||| || | || |||||||||||||||| ||||||||||| ||| |  |||| |||||||||||||||| |||||    
T  7957135 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcgggtcgactcgactcatttccagccctaat 7957052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 34 - 220
Target Start/End: Complemental strand, 10346393 - 10346207
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||     
T  10346393 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 10346294  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatctc 220  Q
    |||||||||||| || | || ||||||||| |||||| ||||||| ||| ||| | ||||| | |||||||||| ||| ||| ||||    
T  10346293 cgagtttcgagccgaaccaattcttatcgaatcgagccgagctcaaacaggttcggttcgacttgactcatttctagccctactctc 10346207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 206
Target Start/End: Complemental strand, 472993 - 472835
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||| |||||||| ||| | |||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||||| | |||    
T  472993 tgaacttaacgagctgaatcaaactgttcgtgaactttaaacgagtcgaactcgagctgaaaaaagagttcgtgtcgaacttgagtcgagtttcaaactg 472894  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    |||||| ||||||| |||||||  ||||||| |||| |||||||||| |||||||||||    
T  472893 agcaaattcttatcaagtcgagtcgagctcatacatatttgattcgactcgactcattt 472835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 25181113 - 25181261
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    |||||||||||||||| |||  || |||| ||||||||||||| ||||||||| |||||  ||| ||||||||||||| |||| ||||||||||| ||||    
T  25181113 agttatgtgatttgagaaaatgaattgaaactaacgagccgaatcgaactgtttgtgaattttaaacgagtcgaactcgagcttaaaaaagagttcgtgt 25181212  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    ||||||| ||  ||||||||||||||||||| ||||| |||||||||||    
T  25181213 cgaactcaagctgagtttcgagctgagcaaattcttaacgagtcgagct 25181261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 6998670 - 6998581
Alignment:
Q  121 gtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccag 210  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||| | ||||| |||||||||||||||    
T  6998670 gtcgaactcgagtcgagtttcgagccgagcaaattcttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccag 6998581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 10962370 - 10962558
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||||| ||||||  ||||||||||| |||| ||||    
T  10962370 agttatgtgctttgaacaaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaacttaagctgaaaaaaaagttcgtgt 10962469  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||  | ||  |||| | || | || |||||  || |||||  ||||||||| | ||| ||||||| ||||||||||||||||    
T  10962470 caaactcgaaccaagactcgaaccgaaccaattcttaatgaatcgagtcgagctcagataggttcgattcgactcgactcatttccagc 10962558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 211
Target Start/End: Complemental strand, 7436882 - 7436704
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcga 131  Q
    |||||||||||| |  |||||||||||||| ||||| |  || |||||||| ||| ||||| ||||||| || ||||||||| ||| || || |||||||    
T  7436882 atttgagcaaacgagttgaacctaacgagctgaaccaagttgctcgtgaactttaaacgagccgaactcgagttgaaaaaag-gttcgtttcaaactcga 7436784  T
Q  132 gtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    || ||||||||||| || | |  |||||||||||||||  ||||||||||| ||| ||||||| |||||| |||| ||||    
T  7436783 gtggagtttcgagccgaaccatttcttatcgagtcgagtcgagctcagacaggttcgattcgactcgacttattttcagc 7436704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 12428233 - 12428087
Alignment:
Q  25 ttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcg 124  Q
    |||| ||||||||||  ||||  ||||||||| ||| |||  |||||||||||| ||| ||| ||||||||||||| |||| || ||| |||| || |||    
T  12428233 ttatttgatttgagctgacaagttgaacctaatgagtcgagtcgaactgttcgtaaactttaaacgagtcgaactcgagcttaacaaaaagttcgtatcg 12428134  T
Q  125 aactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    ||||||||||||||||||||| ||   || |||||||||||||||||    
T  12428133 aactcgagtcgagtttcgagccgaatcaattcttatcgagtcgagct 12428087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 202
Target Start/End: Complemental strand, 33109999 - 33109845
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||| || |||  || || ||||| ||| ||||| ||||||| |||  ||||||  ||| || | |||||||||||||||||||||| |    
T  33109999 tgaacctaacgagccaaatcgagttgctcatgaactttaaacgagccgaactcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 33109900  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactc 202  Q
    | | || |||||||||||||||| ||||||||||| ||| || |||| |||||||    
T  33109899 aaccaattcttatcgagtcgagccgagctcagacaagttcgactcgactcgactc 33109845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 6998714 - 6998662
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactc 100  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  6998714 tgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagtcgaactc 6998662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 215
Target Start/End: Original strand, 9463666 - 9463830
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgag 144  Q
    ||||||| |||| ||||||||||||  |  |||| ||| | | ||||| ||||||| |||| ||||||| |||||| | |||||||||| ||||||| ||    
T  9463666 aactgaatctaaagagccgaaccgagttactcgtaaacttaaaacgagccgaactcgagctaaaaaaag-gtttgttttgaactcgagttgagtttcaag 9463764  T
Q  145 ctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctcta 215  Q
    |||| | || ||| |||||||     ||||||||||||| ||  ||| |||||||||||||||||||||||    
T  9463765 ctgaaccaattctaatcgagt-----tgagctcagacatattcaatttgattcgactcatttccagctcta 9463830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 22295523 - 22295389
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||| ||||||||| |||||||  || |||||||  ||| | ||| ||||||| ||| | ||||| ||||||| |||||||||||||||||||||||| |    
T  22295523 tgaatctaacgagctgaaccgagttgctcgtgaattttaaatgagccgaactcgagccggaaaaaaagtttgtttcgaactcgagtcgagtttcgagccg 22295424  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagaca 182  Q
    | | || ||| ||||||| |||| ||||| |||||    
T  22295423 aaccaattctaatcgagttgagccgagctaagaca 22295389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 3082288 - 3082401
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcga 131  Q
    |||||||||||| |  ||||||||||||| ||||| ||  || |||||||| | | ||||||||||||| || ||||||||  ||| || |||||||| |    
T  3082288 atttgagcaaacgagttgaacctaacgagtcgaactgagttgctcgtgaacttaaaacgagtcgaactcgagttgaaaaaaaggttcgtttcgaactcta 3082387  T
Q  132 gtcgagtttcgagc 145  Q
    ||||||||||||||    
T  3082388 gtcgagtttcgagc 3082401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 4442041 - 4442130
Alignment:
Q  121 gtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccag 210  Q
    |||||||| |||| ||||||||||| ||   || ||||||||||||||| |||||||||||| ||| | ||||| |||||||||||||||    
T  4442041 gtcgaacttgagttgagtttcgagccgaattaattcttatcgagtcgagttgagctcagacaggttcggttcgactcgactcatttccag 4442130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 182
Target Start/End: Complemental strand, 13311531 - 13311381
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcg 130  Q
    |||||||||||  |  ||||||||||||| |||| |||   |||||||||| ||| ||||| ||||||| |||| |||||||| ||| || |||||||||    
T  13311531 atttgagcaaatgaggtgaacctaacgagtcgaatcgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaaag-gttcgtttcgaactcg 13311433  T
Q  131 agtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagaca 182  Q
    |  ||||||| |||  || | || |||||||||||||||  |||||||||||    
T  13311432 aaccgagttttgagtcgaaccaattcttatcgagtcgagtcgagctcagaca 13311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 27925582 - 27925474
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||  | || ||||||||| |||||||||| |||||||||||||  ||| ||||| ||||||  || |||||||| ||||  |||    
T  27925582 agttatgtgttttgaacagtcgaaatgaacctaatgagccgaaccaaactgttcgtgaattttaaacgagccgaacttgagatgaaaaaaaagttcttgt 27925483  T
Q  123 cgaactcga 131  Q
    | |||||||    
T  27925482 caaactcga 27925474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 215
Target Start/End: Original strand, 8291385 - 8291555
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgag 144  Q
    |||||||||||  |||| ||||||| || ||||||| | |||  ||||||||  || | ||||||||  | || ||  |||| | |||| ||||||||||    
T  8291385 aactgaacctattgagctgaaccgagctattcgtgagctttaatcgagtcgagttcgaactgaaaaattatttcgtaacgaatttgagttgagtttcgag 8291484  T
Q  145 ctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctcta 215  Q
    | || | |||| |||||||||||||| ||||| |  || |||||| ||   ||||||||||||||||||||    
T  8291485 ccgaactaaattttatcgagtcgagccgagctgaagcaagtttgactcagctcgactcatttccagctcta 8291555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 2557120 - 2557189
Alignment:
Q  107 aaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagct 176  Q
    |||||| |||||||  | ||||||||||||||||  ||| || | |||| ||||||||||||||||||||    
T  2557120 aaaaaatagtttgtaacaaactcgagtcgagtttaaagccgaactaaattttatcgagtcgagctgagct 2557189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 17493281 - 17493388
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| || |  || ||||||||| |||| ||||| |||| | ||||||| ||| | ||| ||||||  ||||||||||| |||||||||    
T  17493281 agttatgtgctttgaacatatgaattgaacctaatgagctgaaccaaactatccgtgaactttaaatgagccgaacttgagctgaaaaaa-agtttgtgt 17493379  T
Q  123 cgaactcga 131  Q
    | |||||||    
T  17493380 caaactcga 17493388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 27925462 - 27925406
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||| |||||||||  ||||||| ||||||| ||||||| |||| |||||||||||    
T  27925462 tcttaacgagtcgagtcgagctcatacatgttcgattcgactcgaatcatttccagc 27925406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 27633323 - 27633146
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| ||||||||| ||||| |||     
T  27633323 ttgagcaaccaaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagtttgtgttgaacttgagc 27633224  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || ||||||| |||||||| |||||||| || ||| | ||||| ||||||||||||||||    
T  27633223 cgagtttcgagccgaaccaattcttatcaagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagc 27633146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 36538258 - 36538081
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||| ||||||||||| |||| ||||||||||||||     
T  36538258 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccaaactcgagctgaaaaaatagttcgtgtcgaactcgagc 36538159  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || |||||||||||||||| ||||||||||| |||   ||||| ||||||||||||||||    
T  36538158 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcagttcgactcgactcatttccagc 36538081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 20986245 - 20986069
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    ||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||| ||     
T  20986245 ttgagcaaacggactgaacttaacgagccgaacagaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcaagc 20986146  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccag 210  Q
    |||||||||||| || | || |||||||||||||||| ||||||||||| ||| | ||||| |||||||||||||||    
T  20986145 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccag 20986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 44741269 - 44741430
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||| | ||||||||||||||||||| ||| |||||||||| |  |||||||||||||||| ||||||||||||||||||||||||||| |    
T  44741269 tgaacctaacgagtcaaaccgaactgttcgtgaactttaaacgagtcgaatttgagctgaaaaaagagttcgtgtcgaactcgagtcgagtttcgagccg 44741368  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |||||| ||||||| |||||||| ||||||||||| ||| | ||| | || |||||||||||    
T  44741369 agcaaattcttatcaagtcgagccgagctcagacaggttcggttcaactcaactcatttcca 44741430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 41958728 - 41958585
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||     
T  41958728 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 41958629  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctc 177  Q
    |||||||||||| || | || | |||||||||||| | ||||||    
T  41958628 cgagtttcgagccgaaccaatttttatcgagtcgaaccgagctc 41958585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 12139536 - 12139399
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgag 144  Q
    |||||||| |||||||| ||||||||| |||||||||| ||| ||||| ||||||| ||||||||||| |||| |||||||||||||| |||||||||||    
T  12139536 aactgaacttaacgagctgaaccgaacagttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgag 12139437  T
Q  145 ctgagcaaaatcttatcgagtcgagctgagctcagaca 182  Q
    | || | || |||||||||||||| | |||||||||||    
T  12139436 ccgaaccaattcttatcgagtcgaaccgagctcagaca 12139399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 26435948 - 26435771
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||||| ||| || |||||||||| || |||||||| | || |||||||||||||      
T  26435948 ttgagcaaccgaactgaacctaacgagccgaaccgaattgttcgtgaactttaaacaagtcgaactcgagttgaaaaaatatttcgtgtcgaactcgaac 26435849  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||| | || | || ||||||||| |||||| |||||||||||  || | ||||| ||||||||||| ||||    
T  26435848 cgagtttcgaaccgaaccaattcttatcgaatcgagccgagctcagacagattcggttcgactcgactcattttcagc 26435771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 2647573 - 2647743
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  || |||||||| ||| ||||| ||||||| |||  ||||||  ||| || | |||||||||||||||||||||| |    
T  2647573 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaaggttggttttgaactcgagtcgagtttcgagccg 2647672  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatc 218  Q
    | | || |||||||||||||||| ||| |||||||  || || |||| |||||||||||||||| ||||||    
T  2647673 aaccaattcttatcgagtcgagccgagttcagacaaattcgactcgactcgactcatttccagccctaatc 2647743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 33164523 - 33164621
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||  ||||||||||| |||| ||||||||||||||    
T  33164523 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactggagctgaaaaaatagttcgtgtcgaactcgag 33164621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 33831059 - 33830961
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | | |||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||| ||||||||||| |||| ||||||||||||||    
T  33831059 ttgagcaaccgagctgaacctaacgagccgaaccgaattgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgag 33830961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 39801270 - 39801156
Alignment:
Q  66 ccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagt 165  Q
    |||||||||| ||||| |||| |||||  |||||| |||||||||||||||| |||||||||||||| ||| ||||||||||| | || |||| ||||||    
T  39801270 ccgaactgtttgtgaatcttaaacgagctgaactcgagctgaaaaaagagttcgtgtcgaactcgagccgaatttcgagctgaactaattcttctcgagt 39801171  T
Q  166 cgagctgagctcaga 180  Q
    ||||| |||||||||    
T  39801170 cgagccgagctcaga 39801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 33 - 209
Target Start/End: Original strand, 34116711 - 34116888
Alignment:
Q  33 tttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctg-aaaaaagagtttgtgtcgaactcga 131  Q
    ||||| ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||||| | ||||  ||||| |||||| || | ||||| |||||||    
T  34116711 tttgaacaaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccaaacttgagctgaaaaaaaaagctcgtgtcaaactcga 34116810  T
Q  132 gtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
      | || || || |||||| || ||||| ||||| ||| |||||||||||| ||| ||||||| ||||||||||||||    
T  34116811 accaaggtttgaactgagctaattcttaacgagttgagttgagctcagacaggttcgattcgactcgactcatttcca 34116888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 38410202 - 38410334
Alignment:
Q  39 caaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagt 138  Q
    ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||||| | ||||| ||||||||||| |||||||||| | |||||  ||||     
T  38410202 caaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagcctaactcgagctgaaaaaaaagtttgtgtcaagctcgaaccgagg 38410301  T
Q  139 ttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    ||||  |||||| || ||||| |||||||||||    
T  38410302 ttcggactgagccaattcttaacgagtcgagct 38410334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 30711643 - 30711535
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| || | ||||||| |||||||||| |||||||||||||| ||| ||||| ||||||  ||||||||||| |||| ||||    
T  30711643 agttatgtgttttgaacaaacgaattaaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaacttgagctgaaaaaaaagttcgtgt 30711544  T
Q  123 cgaactcga 131  Q
    | |||||||    
T  30711543 caaactcga 30711535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 39689747 - 39689627
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||  ||||| ||||| || ||||||||| |||||||||| ||||| |||||||| ||| | ||| ||||||  ||||||||||| |||||||||    
T  39689747 agttatgtactttgatcaaacgaattgaacctaatgagccgaaccaaactgatcgtgaactttaaaggagccgaacttgagctgaaaaaatagtttgtgt 39689648  T
Q  123 cgaactcgagtcgagtttcga 143  Q
    | |||||||| |||| |||||    
T  39689647 caaactcgagccgaggttcga 39689627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 216
Target Start/End: Complemental strand, 11027479 - 11027286
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| ||  ||||  || ||| |||||| |||||||||||||| ||| ||||| ||||||  || || ||||| |||| ||||    
T  11027479 agttatgtgctttgaacaaacgaatcgaactcaatgagtcgaaccaaactgttcgtgaactttaaacgagccgaacttgagttggaaaaaaagttcgtgt 11027380  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
    | |||||||  |||| ||||| | || |||| |||||  |||| |||  || |||||||| ||| ||||||| |||||||||||||||| ||||    
T  11027379 caaactcgatccgaggttcgaaccgaacaaattcttaatgagttgagtcgaactcagacaagttcgattcgactcgactcatttccagccctaa 11027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 40458521 - 40458402
Alignment:
Q  26 tatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcga 125  Q
    ||||| |||||||||||  |  ||||||||||||| ||||||||| || |||||||  ||| ||||| ||||||| || ||||||||  ||| || ||||    
T  40458521 tatgtaatttgagcaaatgagttgaacctaacgagtcgaaccgaattgctcgtgaattttaaacgagccgaactcgagttgaaaaaaatgttcgtttcga 40458422  T
Q  126 actcgagtcgagtttcgagc 145  Q
    ||||||||||||||| ||||    
T  40458421 actcgagtcgagttttgagc 40458402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 34064310 - 34064244
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactc 100  Q
    |||||||| | ||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||    
T  34064310 ttgagcaaccgaactgaacctaacgaaccgaaccgaactgttcgtgaactttaaacgagccgaactc 34064244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 216
Target Start/End: Original strand, 20204352 - 20204529
Alignment:
Q  39 caaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagt 138  Q
    ||||| || |||| |||| ||| |||||| |||||||||||||| ||| ||||| ||||||| | ||||||||| | |||||||  | |||||  ||||     
T  20204352 caaacgaattgaatctaatgagtcgaaccaaactgttcgtgaactttaaacgagccgaactcgaactgaaaaaaaaatttgtgtaaagctcgaaccgagg 20204451  T
Q  139 ttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
    ||||  |  ||| || ||||| |||| |||   | ||||||||||||||||||||| ||||||||||| |||| ||||    
T  20204452 ttcggaccaagccaattcttaacgagacgaatcgggctcagacatgtttgattcgactcgactcatttacagccctaa 20204529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 18667290 - 18667131
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||| ||||||||||||  |  |||| ||| ||| ||||| | ||||  |||||||||||   ||||| ||||||||||||| |||||||||| |    
T  18667290 tgaacctaatgagccgaaccgagttactcgtaaactttaaacgagccaaacttgagctgaaaaaaa--tttgtttcgaactcgagtcaagtttcgagccg 18667193  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |    | ||||||||||||||||  |||||||||  ||| ||||||| |||| |||||||||    
T  18667192 aagctattcttatcgagtcgagccaagctcagacgagttcgattcgactcgattcatttcca 18667131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 3409822 - 3409939
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||   |||||||   |||||||||| ||| ||||| ||||||| || | ||||||  ||| || |||||||||||||||||||| ||| |    
T  3409822 tgaacctaacgatttgaaccgagtagttcgtgaactttaaacgagccgaactcgagttaaaaaaaaggttcgtatcgaactcgagtcgagtttcaagccg 3409921  T
Q  148 agcaaaatcttatcgagt 165  Q
    ||| || |||||||||||    
T  3409922 agctaattcttatcgagt 3409939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 18053590 - 18053398
Alignment:
Q  21 atagttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaaga--gttt 118  Q
    ||||||||||| ||||| |||||| |  ||||||||||| |  |||| || |||| |||||| ||| ||||| ||||||  ||||||||||| |  |||     
T  18053590 atagttatgtgctttgaacaaacagatggaacctaacgaacttaaccaaattgtttgtgaactttaaacgagccgaacttaagctgaaaaaaaaaagttc 18053491  T
Q  119 gtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||| | ||||| |  |||| ||| | | |||| || ||||| |||||||||  ||| ||||||| ||| ||||||| ||||||||||||||||    
T  18053490 gtgccaaactcaaaccgaggttcaaaccgagccaattcttaacgagtcgagtcgagatcagacaagttcgattcgactcgactcatttccagc 18053398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 33830950 - 33830896
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |||||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||    
T  33830950 tcttatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttcca 33830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 40675330 - 40675209
Alignment:
Q  50 aacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgag 149  Q
    |||||| |||||||||||||  |||| |||||| ||| ||||| | || |  || | ||||||  ||| || |||||||||||||||||||||||| ||     
T  40675330 aacctatcgagccgaaccgagttgtttgtgaactttaaacgagccaaatttgagttaaaaaaatggttcgtatcgaactcgagtcgagtttcgagccgaa 40675231  T
Q  150 caaaatcttatcgagtcgagct 171  Q
    | || ||||||||| |||||||    
T  40675230 ccaattcttatcgaatcgagct 40675209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 1094049 - 1093959
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagt 138  Q
    ||||||||||||||||||||||   ||||| |||| ||| ||||| ||||||| || | ||||||  ||| || || ||||||||||||||    
T  1094049 tgaacctaacgagccgaaccgagtagttcgcgaactttaaacgagccgaactcaagttaaaaaaaaggttcgtttcaaactcgagtcgagt 1093959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 33475814 - 33475725
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaa 112  Q
    ||||||||| ||||| | ||| || |||||||||  | ||||| | |||||||||| ||| ||| ||||| ||||||| |||||||||||    
T  33475814 agttatgtgttttgaacgaacgaattgaacctaataaaccgaatcaaactgttcgtaaactttaaacgagccgaactcgagctgaaaaaa 33475725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 5e-47; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 52198943 - 52198780
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||||||||||||||||| ||||||| |||||| ||| ||||||| || || |||||||||||||||| ||||||||||||||||||||||||||| |    
T  52198943 tgaacctaacgagccgaaccaaactgtttgtgaactttaaacgagtcaaattcgagctgaaaaaagagttcgtgtcgaactcgagtcgagtttcgagccg 52198844  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||| | || ||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||||    
T  52198843 agcagattcatatcgagtcgagccgagctcagacaggttcggttcgactcgactcatttccagc 52198780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 34 - 211
Target Start/End: Original strand, 39471038 - 39471215
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||||| |||| |||||||||||||||| |||||||||||||||| ||| |||||  |||||| ||||||||||| |||| ||||||||||||||     
T  39471038 ttgagcaaacgaactaaacctaacgagccgaatcgaactgttcgtgaactttaaacgagctgaactcgagctgaaaaaatagttcgtgtcgaactcgagc 39471137  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || |||||||||||||||| ||| ||||||| ||| | ||||| ||||||||||||||||    
T  39471138 cgagtttcgagccgaaccaattcttatcgagtcgagccgagttcagacaggttcggttcgactcgactcatttccagc 39471215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 15823134 - 15823276
Alignment:
Q  22 tagttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtg 121  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||       |||  ||||||||| ||||||||||||| ||||||||||||||||  ||    
T  15823134 tagttatgtgatttgagcaaacatactgaacttaacgagccgaa-------gttgatgaaccttaaacgagtcgaactcgagctgaaaaaagagttcatg 15823226  T
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  15823227 tcgaactcgagtcgagtttcgagccgagcaaaattttatcgagccgagct 15823276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 38644198 - 38644360
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||| ||||||||||| ||||||||| ||| || ||||||| || ||||||||||| |||| |||||||||||||||||||||| |||| |    
T  38644198 tgaacctaacgagtcgaaccgaactattcgtgaactttaaacaagtcgaattcgagctgaaaaaa-agttcgtgtcgaactcgagtcgagttttgagccg 38644296  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||| ||||||| |||||||| ||||||||||| ||| | ||||| || |||||||||||||    
T  38644297 aacaaattcttatctagtcgagccgagctcagacaggttcggttcgactccactcatttccagc 38644360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 216
Target Start/End: Original strand, 46294187 - 46294378
Alignment:
Q  25 ttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcg 124  Q
    |||||||| ||||| || | |||||||||||||||  |||||||||||||||| |||||||| |||||  |||||| |||| ||||||||||| |||||     
T  46294187 ttatgtgagttgagaaatcgaactgaacctaacgaatcgaaccgaactgttcgcgaaccttaaacgagctgaactcgagctaaaaaaagagttcgtgtca 46294286  T
Q  125 aactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
    | ||||||||||||||||| |||| | || |||||| | ||||||| ||||||||||  ||| || |||| |||||||||||||||| ||||    
T  46294287 atctcgagtcgagtttcgaactgaaccaattcttattgcgtcgagccgagctcagacgagttcgactcgactcgactcatttccagccctaa 46294378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 207
Target Start/End: Complemental strand, 32688740 - 32688567
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| ||||  |||| ||||||||     
T  32688740 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcatgtcaaactcgagc 32688641  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttc 207  Q
     ||||||||||| || | || | |||||||||||||| |||||||||||  || | ||| | ||||||||||||    
T  32688640 tgagtttcgagccgaaccaatttttatcgagtcgagccgagctcagacagattcggttcaactcgactcatttc 32688567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 39943685 - 39943838
Alignment:
Q  28 tgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaac 127  Q
    ||||||||||  |||| || |||||||| |||||||||| ||||||| ||||||| ||| || || ||||||| ||||||||||| |||| ||||| |||    
T  39943685 tgtgatttgaataaacgaaatgaacctatcgagccgaactgaactgtacgtgaactttaaacaagccgaactcaagctgaaaaaaaagttcgtgtcaaac 39943784  T
Q  128 tcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagac 181  Q
    ||||| ||||||||||||||| | || |||||||||||||||| ||||||||||    
T  39943785 tcgagccgagtttcgagctgaaccaattcttatcgagtcgagccgagctcagac 39943838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 53530115 - 53530292
Alignment:
Q  33 tttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    ||||| |||||||| ||||  ||| |||| ||||| |||||||||||||| ||| ||||| ||||||  ||||||||||| |||||||||  |||||||     
T  53530115 tttgaacaaacaaattgaatttaatgagctgaaccaaactgttcgtgaactttaaacgagccgaacttgagctgaaaaaa-agtttgtgttaaactcgaa 53530213  T
Q  133 tcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
     |||| ||| | |||||| || ||||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  53530214 ccgaggttcaaactgagccaattcttaacgagtcgagtcgagctcagacatgttcgattcgattcgactcatttccagc 53530292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 7029324 - 7029139
Alignment:
Q  25 ttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcg 124  Q
    |||||||||||||||||||||||| ||||||| || || |||| || ||||||| ||| ||| ||||| ||||||  | || |||||| | || ||||||    
T  7029324 ttatgtgatttgagcaaacaaactaaacctaaagaacctaaccaaattgttcgtaaactttaaacgagccgaacttaaacttaaaaaaaa-ttcgtgtcg 7029226  T
Q  125 aactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||  || ||||||   ||| || | || ||||||||||||||||    
T  7029225 aactcgagccgagtttcgagctgaacaaattcttatcgagtcgagtcgaactcagatgagttcgactggactcgactcatttccagc 7029139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 33439191 - 33439376
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||||||||||||  ||||||||||| |||| ||||    
T  33439191 agttatgtgctttgaacaaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagtcgaacttgagctgaaaaaa-agttcgtgt 33439289  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    | |||||||  | ||  |||| | |||| || |||||  ||||||||  ||||||||| | ||| ||||||| ||||||||||||||    
T  33439290 caaactcgaaccaaggctcgaaccgagccaattcttaatgagtcgagtcgagctcagataggttcgattcgactcgactcatttcca 33439376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 25253041 - 25252882
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||| ||| |||  ||| |||||||||||| ||| ||||| ||||||| |||| || ||| |||| || | ||||||||||||||||| |||| |    
T  25253041 tgaacctaatgagtcgagtcgagctgttcgtgaactttaaacgagccgaactcgagcttaacaaaaagttcgtattgaactcgagtcgagttttgagccg 25252942  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttc 207  Q
    | | || ||||||||||||||| |||||||||||| ||| || |||| ||||||||||||    
T  25252941 aaccaattcttatcgagtcgagttgagctcagacaggttcgactcgactcgactcatttc 25252882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 39133891 - 39133776
Alignment:
Q  102 agctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgact 201  Q
    ||||||||||| | ||||||||||||||||| |||||||||||| || | || |||||||||||||||||||||||||||| |||   ||||| |||| |    
T  39133891 agctgaaaaaataatttgtgtcgaactcgagccgagtttcgagccgaaccaattcttatcgagtcgagctgagctcagacaggttcagttcgactcgaat 39133792  T
Q  202 catttccagctctaat 217  Q
    ||||| |||| |||||    
T  39133791 cattttcagccctaat 39133776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 27040494 - 27040680
Alignment:
Q  25 ttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcg 124  Q
    |||||||| ||||| ||| ||| ||||| |||||||  |||||||| | |||| |||| | |  ||||||||| |  |||| ||| || |||||||   |    
T  27040494 ttatgtgaattgagaaaaaaaaatgaacataacgagttgaaccgaaatattcgcgaacttcaaccgagtcgaatttgagctaaaataaaagtttgtaatg 27040593  T
Q  125 aactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||||||||||||||| || | |||||||| ||||||||| |||||||| ||| ||| || |||| ||||||||||||||||    
T  27040594 aactcgagtcgagtttcgagccgaaccaaatcttaacgagtcgagttgagctcaaacaagttcgactcgactcgactcatttccagc 27040680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 5418210 - 5418047
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||| |||||||||||||||||  || |||||||| ||| |||||  ||| || |||  ||||||  ||| || | |||||||||||||||||||||| |    
T  5418210 tgaatctaacgagccgaaccgagttgctcgtgaactttaaacgagctgaaatcgagcccaaaaaaaggttcgttttgaactcgagtcgagtttcgagccg 5418111  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | | || |||||||||||| ||| || |||||||| ||| || |||| ||||||||||||||||    
T  5418110 aaccaattcttatcgagtcaagccgaactcagacaagttcgactcgactcgactcatttccagc 5418047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 23206896 - 23206999
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||| |||| ||| || |||| |||||||||| |||     
T  23206896 ttgagcaaccgaactgaacctaacgagtcgaaccgaactgttcgtgaactttaaacgagccgaactcgagctcaaataatagttcgtgtcgaactagagc 23206995  T
Q  134 cgag 137  Q
    ||||    
T  23206996 cgag 23206999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 206
Target Start/End: Complemental strand, 33896083 - 33895925
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||||| | || |||| ||| |||||||||||| ||| ||||| |||| || |||| ||||||  ||| |||||||||||||||||||||| ||||||    
T  33896083 tgaacctatcaagtcgaatcgagctgttcgtgaactttaaacgagccgaattcgagctaaaaaaaaggttcgtgtcgaactcgagtcgagtttggagctg 33895984  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    | | |  |||||| ||||||||  ||||||||||| ||| | ||||| | |||||||||    
T  33895983 aaccatttcttattgagtcgagtcgagctcagacaagttcggttcgacttgactcattt 33895925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 30740872 - 30740736
Alignment:
Q  75 tcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgag 174  Q
    |||||||| ||| ||||| ||||||| |||| ||||||  ||| |||||||||||||||||||||||||||  | | |  |||||||||||| ||   ||    
T  30740872 tcgtgaactttaaacgagccgaactcgagctaaaaaaaaggttcgtgtcgaactcgagtcgagtttcgagccaaaccatttcttatcgagtcaagtaaag 30740773  T
Q  175 ctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||| ||| | ||||| ||||||||||||||||    
T  30740772 ctcagacaagttcggttcgactcgactcatttccagc 30740736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 41609481 - 41609381
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | ||||||||||||| ||||||||||||  |||||||| | | | ||||| ||||||| ||||||||||| |||| |||||||||||||||    
T  41609481 ttgagcaaccgaactgaacctaacaagccgaaccgaa--gttcgtgaccttcaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagt 41609384  T
Q  134 cga 136  Q
    |||    
T  41609383 cga 41609381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 54394001 - 54394109
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| || ||||||||| |||||||||  |||||||||||||| ||| ||||| ||||||  ||||| ||||| |||| ||||    
T  54394001 agttatgtgctttgaacaaacgaattgaacctaatgagccgaactaaactgttcgtgaactttaaacgagccgaacttgagctggaaaaaaagttcgtgt 54394100  T
Q  123 cgaactcga 131  Q
    | |||||||    
T  54394101 caaactcga 54394109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 8086904 - 8087030
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgag 144  Q
    |||||||||||||||||||||||||  |||| | ||||   |  ||||||||  || ||||||||||   ||| ||  |||||| |||||||||||||||    
T  8086904 aactgaacctaacgagccgaaccgagttgtttgcgaactcgaaccgagtcgagttcgagctgaaaaatatgttcgtaacgaactagagtcgagtttcgag 8087003  T
Q  145 ctgagcaaaatcttatcgagtcgagct 171  Q
    |||| |||||| |||||||||||||||    
T  8087004 ctgaacaaaattttatcgagtcgagct 8087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 12710227 - 12710096
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct--gaaaaaagagtttgtgtcgaactcgagtcgagtttcgagc 145  Q
    ||||||||||||||||||||||  |||||| |||| ||| ||||| ||||||| || |  |||||||| ||| || || |||||||||||||||||||||    
T  12710227 tgaacctaacgagccgaaccgagttgttcgcgaactttaaacgagccgaactcgagttaagaaaaaag-gttcgtttcaaactcgagtcgagtttcgagc 12710129  T
Q  146 tgagcaaaatcttatcgagtcgagctgagctcag 179  Q
     || | || |||||||||||||||  ||||||||    
T  12710128 cga-ccaattcttatcgagtcgagtcgagctcag 12710096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 19561377 - 19561503
Alignment:
Q  45 aactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgag 144  Q
    |||||||||||| ||| ||| |||| |||||||  ||| ||| ||||  ||||||| |||| |||||| ||||||| |||||||||| |||||||| ||     
T  19561377 aactgaacctaaagagtcgagccgagctgttcgataactttaaacgaaccgaactcaagcttaaaaaaaagtttgtatcgaactcgaatcgagttttgaa 19561476  T
Q  145 ctgagcaaaatcttatcgagtcgagct 171  Q
    || | | || |||||||||||||||||    
T  19561477 ctaaactaattcttatcgagtcgagct 19561503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 20407784 - 20407881
Alignment:
Q  109 aaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    |||| |||| || |||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||| ||| ||| || |||| |||||||||||    
T  20407784 aaaaaagttcgtatcgaactcgagtcgagtttcgagccgaaccaatacttatcgagtcgagccgagctcaaacacgttggactcgactcgactcattt 20407881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 20661842 - 20661678
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactc-cagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagct 146  Q
    ||||||||||||||||||||||  ||||||||||| ||| |||||  ||||||  | || ||||||| |||||| || ||||| ||||||||||||||||    
T  20661842 tgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagctgaactcgaaccttaaaaaag-gtttgtatcaaactcaagtcgagtttcgagct 20661744  T
Q  147 gagcaaaatcttatcgagtc-gagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||   || | |||||||||| |||  |||||||||   |||||| |||| | ||||||||||||||    
T  20661743 gaatcaatttttatcgagtcagagtcgagctcagatgagtttgaatcgactggactcatttccagc 20661678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 45714263 - 45714187
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcga 131  Q
    ||||||| ||||| |||||||||||||| ||| ||||||||||||  ||||||||||| |||| ||||| |||||||    
T  45714263 aacgagctgaaccaaactgttcgtgaactttaaacgagtcgaacttgagctgaaaaaaaagttcgtgtcaaactcga 45714187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 40943061 - 40942904
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||| ||||||||   |||||||||| ||| | ||| ||||||| ||||  |||||| ||| || | ||||||||| |||||||||||  |    
T  40943061 tgaacctaacgagtcgaaccgagtggttcgtgaactttaaatgagccgaactcgagctagaaaaag-gttcgttttgaactcgagccgagtttcgagtcg 40942963  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | | || ||||||||||| |||  |||||||||||     ||||||| ||||||||||||||||    
T  40942962 aaccaattcttatcgagttgagtcgagctcagaca-----gattcgactcgactcatttccagc 40942904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 7834243 - 7834066
Alignment:
Q  31 gatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaaga--gtttgtgtcgaact 128  Q
    |||| |||||||| |  ||||||||| |||  |||||||||||||||||||| ||| | |||  |||||| |||| |||||| |  ||| || || ||||    
T  7834243 gattcgagcaaacgagttgaacctaatgagttgaaccgaactgttcgtgaactttaaatgagctgaactcgagctaaaaaaaaaaggttcgtttcaaact 7834144  T
Q  129 cgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||| | |||||| ||||||| | || ||||||||||||||| |     |||||| ||| || |||| ||||||||||||||||    
T  7834143 cgaattgagttttgagctgaaccaattcttatcgagtcgagtt-----cagacaggttcgactcgactcgactcatttccagc 7834066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 52934319 - 52934235
Alignment:
Q  122 tcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||| ||||||||||||||| |||  || |||||||||||||||  |||||||||     | ||||||| ||||||||||||||||    
T  52934319 tcgaactcaagtcgagtttcgagccgagtcaattcttatcgagtcgagtcgagctcaga-----tggattcgactcgactcatttccagc 52934235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 41609374 - 41609318
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||||||| |||||||| || ||| | ||||| ||||||||||||||||    
T  41609374 tcttatcgagtcgagccgagctcaggcaggttcggttcgactcgactcatttccagc 41609318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 39714892 - 39714826
Alignment:
Q  105 tgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    ||||||||||||| |||||||||||||||  ||||| ||| ||| | || |||||| ||||||||||    
T  39714892 tgaaaaaagagttcgtgtcgaactcgagtaaagttttgagttgaactaattcttattgagtcgagct 39714826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 54394121 - 54394175
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    ||||| ||||||||| ||| |||||||| ||| ||||||| ||||||||||||||    
T  54394121 tcttaacgagtcgagttgaactcagacaggttcgattcgactcgactcatttcca 54394175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 25633712 - 25633756
Alignment:
Q  25 ttatgtgatttgagcaaacaaactgaacctaacgagccgaaccga 69  Q
    |||||||||| |||||| | |||||||||||| ||||||||||||    
T  25633712 ttatgtgattcgagcaaccgaactgaacctaatgagccgaaccga 25633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 51067817 - 51067701
Alignment:
Q  90 gagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttga 189  Q
    ||||||||||| |||  ||||||   ||||| ||||| |||||| ||||||||||| || | || ||||||||| | ||  |||||| ||||| ||| ||    
T  51067817 gagtcgaactcgagccaaaaaaatgatttgtatcgaagtcgagttgagtttcgagccgaactaattcttatcgattagaattgagcttagacaagttcga 51067718  T
Q  190 ttcgattcgactcattt 206  Q
    || || |||||||||||    
T  51067717 tttgactcgactcattt 51067701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 54432848 - 54432928
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaa 112  Q
    |||||||||||  |  ||||||||||||| ||||||||  ||||||||||  ||| ||||| ||||||| |||| ||||||    
T  54432848 atttgagcaaatgaggtgaacctaacgagtcgaaccgagttgttcgtgaattttaaacgagccgaactcgagctaaaaaaa 54432928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 54432959 - 54433015
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||||||  |||||||||||| || || | || ||||||||||||||||    
T  54432959 tcttatcgagtcgagtcgagctcagacatattcgacttgactcgactcatttccagc 54433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 9e-46; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 36418701 - 36418524
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||  ||||||| ||||||||||| | || ||||||||||||||     
T  36418701 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgaaccgaactcgagctgaaaaaataattcgtgtcgaactcgagc 36418602  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || |||||||||||||||| |||||||| ||  || ||||||| ||||||||||||||||    
T  36418601 cgagtttcgagccgaaccaattcttatcgagtcgagccgagctcaggcagattcgattcgactcgactcatttccagc 36418524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 37 - 209
Target Start/End: Original strand, 45654329 - 45654501
Alignment:
Q  37 agcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcga 136  Q
    |||||||||||||||||||||||||||||||||||| ||| | ||| ||| ||||||||||| | ||||||||||| | || |||||||||||||| |||    
T  45654329 agcaaacaaactgaacctaacgagccgaaccgaactattcataaactttaaacgagtcgaacccgagctgaaaaaataattcgtgtcgaactcgagccga 45654428  T
Q  137 gtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
     |||| |||||| | || |||||||||||||||  |||||||| || ||| || |||| ||||||||||||||    
T  45654429 atttcaagctgaaccaattcttatcgagtcgagtcgagctcaggcaggttcgactcgactcgactcatttcca 45654501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 32179494 - 32179328
Alignment:
Q  54 taacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaa 153  Q
    ||||||||||||||||||||||||||||  ||| ||||| ||||||| ||||||||||| |||| ||||| ||||| || |||||||||||| || | ||    
T  32179494 taacgagccgaaccgaactgttcgtgaattttaaacgagccgaactcgagctgaaaaaatagttcgtgtcaaactcaagccgagtttcgagccgaaccaa 32179395  T
Q  154 atcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatctc 220  Q
     ||||||||| |||||| |||||||| || ||| | ||||| |||||||||||||||| ||||||||    
T  32179394 ttcttatcgaatcgagccgagctcaggcaagttcggttcgactcgactcatttccagccctaatctc 32179328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 37441788 - 37441954
Alignment:
Q  50 aacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgag 149  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| |||||||||||||| |||||||||||| ||     
T  37441788 aacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgagccgagtttcgagccgaa 37441887  T
Q  150 caaaatcttatcgagtcgagctgagc-----tcagacatgtttgattcgattcgactcatttccagc 211  Q
    | || |||||||||||||||| ||||     |||| || ||| | ||||| ||||||||||||||||    
T  37441888 ccaattcttatcgagtcgagccgagccgagctcaggcaggttcggttcgactcgactcatttccagc 37441954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 37 - 209
Target Start/End: Original strand, 21681584 - 21681756
Alignment:
Q  37 agcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcga 136  Q
    ||||||| | |||||||||||||||||||||||||| ||| ||||  ||| |||||| |||| | ||||||||||| |||| |||||||||||||| |||    
T  21681584 agcaaacgagctgaacctaacgagccgaaccgaactattcatgaattttaaacgagttgaacccgagctgaaaaaatagttcgtgtcgaactcgagccga 21681683  T
Q  137 gtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    ||||  |||||| | || ||||||||||||||| ||||||||| || ||| || |||| ||| ||||||||||    
T  21681684 gttttaagctgaaccaattcttatcgagtcgagttgagctcaggcaggttcgactcgactcggctcatttcca 21681756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 206
Target Start/End: Original strand, 48575702 - 48575867
Alignment:
Q  41 aacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagttt 140  Q
    |||| ||||||| ||| ||| |||| | || ||||| ||||| ||| |||||| |||||| |||||||||||||||| |||| ||||| |||||||||||    
T  48575702 aacacactgaacttaatgagtcgaatcaaattgttcatgaactttaaacgagttgaactcgagctgaaaaaagagttcgtgttgaacttgagtcgagttt 48575801  T
Q  141 cgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcattt 206  Q
    ||||   |  ||| |||||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  48575802 cgagtcaaataaattcttatcgagtcgagtcgagctcagacatgttcgattcgattcgactcattt 48575867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 14770811 - 14771006
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| || |||||||||||||||||||| |||||||  ||||| ||| ||||| |||||||  |||||||||| |||| ||||    
T  14770811 agttatgtgctttgaacaaacgaaatgaacctaacgagccgaaccaaactgtttctgaactttaaacgagccgaactcgggctgaaaaaaaagttcgtgt 14770910  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatc 218  Q
    | | |||||  |||| ||||  | |||| || ||||| |||||||||  ||| ||| ||||||| ||||||| ||| |||||||||||| ||||||    
T  14770911 caagctcgaaccgaggttcggaccgagccaattcttaacgagtcgagtcgagttcaaacatgttcgattcgactcggctcatttccagccctaatc 14771006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 24470485 - 24470583
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| || |||||||||||    
T  24470485 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtatcgaactcgag 24470583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 24575467 - 24575306
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  ||||||||||| ||| ||||| ||||||| || | |||||| |||| || || ||||||||||||||||||||| |    
T  24575467 tgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagccgaactcgagttaaaaaaaaagttcgtttcaaactcgagtcgagtttcgagccg 24575368  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    | | || ||||||||| || |   ||||||||||| ||| || |||| ||||||||||||||    
T  24575367 aaccaattcttatcgattcaaatcgagctcagacaggttcgactcgactcgactcatttcca 24575306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 29678080 - 29678240
Alignment:
Q  51 acctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagc 150  Q
    |||||||||||||||| ||  || |||||||| ||| ||||| ||||||| || ||||||||  ||| || ||||||| |||||||||||||||| || |    
T  29678080 acctaacgagccgaacagagttgctcgtgaactttaaacgagccgaactcgagatgaaaaaaaggttcgtttcgaacttgagtcgagtttcgagccgaac 29678179  T
Q  151 aaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
     |  |||||||||||||||   |||||||||| ||| ||||||| ||||||||||||||||    
T  29678180 catttcttatcgagtcgagtcaagctcagacaggttcgattcgactcgactcatttccagc 29678240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 23 - 217
Target Start/End: Complemental strand, 7595912 - 7595718
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||| | ||||| ||||  || ||||||||| |||||||||| || ||| ||||||| ||| ||||| ||||||  ||||||||||| || | ||||    
T  7595912 agttatgcgctttgaacaaatgaattgaacctaatgagccgaaccaaattgtccgtgaactttaaacgagccgaacttgagctgaaaaaaaagctcgtgt 7595813  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    | |||||||  |||| ||||| | |||| || ||||| ||||||||| ||||||||||||  || ||||||||| |||| ||||||||| |||||    
T  7595812 caaactcgaaccgaggttcgaaccgagctaattcttaacgagtcgagttgagctcagacagattcgattcgatttgacttatttccagccctaat 7595718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 216
Target Start/End: Complemental strand, 35810301 - 35810109
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    |||||| || ||||| ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||||| ||||||  ||||| ||||| |||| ||||    
T  35810301 agttatttgctttgaacaaacgaattgaacctaatgagccgaaccaaactgttcgtgaac-ttaaacgagccgaacttgagctggaaaaaaagttcgtgt 35810203  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
      ||||| |  |||| ||||| | |||  || ||||| ||||||||| |||||||||| | ||| ||||||| |||||||||||||||| ||||    
T  35810202 tcaactcaaaccgaggttcgaaccgagtcaattcttaacgagtcgagttgagctcagataggttcgattcgactcgactcatttccagccctaa 35810109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 31869054 - 31868910
Alignment:
Q  50 aacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgag 149  Q
    |||| |||||||||||||||  ||||||||||| ||| ||||| ||||| | || | ||||||  |||||| |||||||||||||||||||||||| |||    
T  31869054 aacccaacgagccgaaccgagatgttcgtgaactttaaacgagccgaacccgagtttaaaaaatggtttgtatcgaactcgagtcgagtttcgagccgag 31868955  T
Q  150 caaaatcttatcgagtcgagctgagctcagacatgtttgattcga 194  Q
      || |||||| ||||||||| ||||||||||  |||||| ||||    
T  31868954 tcaattcttattgagtcgagccgagctcagacgagtttgactcga 31868910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 35309185 - 35309012
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||| ||||||||||| ||| ||| | ||| ||||||| |||||||||||    | |||| ||||||||      
T  35309185 ttgagcaaccgaactgaacctaacgagccgaacggaactgttcgtaaactttaaatgagccgaactcgagctgaaaaaa----tcgtgtggaactcgaac 35309090  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||||||| || | || |||||||||||||| | ||||||||  | ||| | ||||| || |||||||||||||    
T  35309089 cgagtttcgagccgaaccaattcttatcgagtcgaaccgagctcaggtaggttcggttcgactcaactcatttccagc 35309012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 45582051 - 45582235
Alignment:
Q  27 atgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaa 126  Q
    ||||||||||| ||||  |||||||| |||||||| |||  ||||| |||| |||| ||| ||||  ||||||| ||||||||||| |||  ||||||||    
T  45582051 atgtgatttgaacaaatgaactgaacttaacgagctgaattgaactattcgcgaactttaaacgaaccgaactcgagctgaaaaaaaagtccgtgtcgaa 45582150  T
Q  127 ctcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||| |  ||||||||||||||| | ||  ||||||||||||||  ||||||| |||  || || |||| ||||||||||||||||    
T  45582151 ctcaaaccgagtttcgagctgaactaatccttatcgagtcgagtcgagctcatacagattcgactcgactcgactcatttccagc 45582235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 14578979 - 14579174
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||||| ||||| ||||| || ||||||||| ||| |||||| |||||||||||||  ||| ||||| ||||||  | || |||||| |||| ||||    
T  14578979 agttatgtgctttgaacaaacgaattgaacctaatgagtcgaaccaaactgttcgtgaattttaaacgagccgaacttgaactcaaaaaaaagttcgtgt 14579078  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaatc 218  Q
    | |||||||  |||| || || |  ||| || ||||| |||||||||  ||||||| ||| ||| ||||||| |||||||||||||||| ||||||    
T  14579079 caaactcgaaccgaggtttgaacaaagccaattcttaacgagtcgagtcgagctcatacaggttcgattcgactcgactcatttccagccctaatc 14579174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 5205082 - 5205246
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagttt-gtgtcgaactcgagtcgagtttcgagct 146  Q
    ||||||||||||||||||||||  |||||| |||| ||| | ||||||||||  || | |||||| || || || || |||||||||||||||||||||     
T  5205082 tgaacctaacgagccgaaccgagttgttcgcgaactttaaatgagtcgaacttgaggtaaaaaaaaaggttcgtttcaaactcgagtcgagtttcgagcc 5205181  T
Q  147 gagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    || | || |||||| |||||||   ||||||||||| ||| || |||| ||||||||||||||||    
T  5205182 gaaccaattcttatggagtcgaatcgagctcagacaggttcgactcgactcgactcatttccagc 5205246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 15257803 - 15257977
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcga 131  Q
    |||||||||||  |  ||||||||||||| ||||||||   |||||||||| ||| ||||| ||||||| ||||  |||||  ||| || ||||||||||    
T  15257803 atttgagcaaatgaggtgaacctaacgagtcgaaccgagtggttcgtgaactttaaacgagccgaactcgagctagaaaaatggttcgtttcgaactcga 15257902  T
Q  132 gtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
      |||||||||||| || | || ||||||||||||||| ||||||||||||     ||||||| ||||||||||| ||||    
T  15257903 accgagtttcgagccgaaccaattcttatcgagtcgagttgagctcagaca-----gattcgactcgactcattttcagc 15257977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 43090005 - 43090163
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||||||||||||  || |||||||| ||| ||||| ||||||| |||  ||||||  ||| || | |||||||||||||||||||||| |    
T  43090005 tgaacctaacgagccgaaccgagttgctcgtgaactttaaacgagccgaactcgagcccaaaaaaatgttcgttttgaactcgagtcgagtttcgagccg 43090104  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | | || ||||     ||||||| ||||||||||| ||| || |||| ||||||||||||||||    
T  43090105 aaccaattctt-----gtcgagccgagctcagacaagttcgactcgactcgactcatttccagc 43090163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 23916322 - 23916135
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||| ||| ||||| ||||| || |||| |||| || ||||||| ||||||||||| || ||| ||||| ||||||  ||||| ||||| ||||  |||    
T  23916322 agttacgtgttttgaacaaacgaattgaatctaatgaaccgaaccaaactgttcgtggactttaaacgagccgaacttgagctggaaaaa-agttcttgt 23916224  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||  |||| ||| | | ||||||| ||||| |||||||||  ||||| ||||| ||| ||||||| ||||||||||||||||    
T  23916223 caaactcgaaccgagattcaaaccgagcaaattcttaacgagtcgagtcgagcttagacaggttcgattcgactcgactcatttccagc 23916135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 42916714 - 42916902
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||| | ||||| ||||| || ||||||||| |||||||||| |||||||||||||| |||  |||| ||||||  |||| |||||| || | ||||    
T  42916714 agttatgcgctttgaacaaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaagcgagccgaacttgagctaaaaaaaaagctcgtgt 42916813  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||  |||| ||| | |  ||| || ||||| |||||| || |||||| | ||| ||| ||||||| ||||||||||||||||    
T  42916814 caaactcgaaccgaggttcaaaccaagctaattcttaacgagtcaagttgagcttaaacaggttcgattcgactcgactcatttccagc 42916902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 217
Target Start/End: Original strand, 46265556 - 46265748
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||| | ||||| ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||||| ||||||  | ||  ||||| || | ||||    
T  46265556 agttatgcgctttgaacaaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaaacgagccgaacttgaact--aaaaaaagctcgtgt 46265653  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    | ||||||| ||||| ||||| | || | || ||||| |||||| || |||||| | ||| ||| ||||| | |||||||||||||||| |||||    
T  46265654 caaactcgaatcgaggttcgaaccgaactaattcttaacgagtcaagttgagcttaaacaggttcgattcaactcgactcatttccagccctaat 46265748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 209
Target Start/End: Complemental strand, 7955832 - 7955655
Alignment:
Q  32 atttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcg 130  Q
    |||||||||||  |  ||||||||||||| |||||| |   |||||||||| ||| ||||| ||||||| |||| ||||||||| || || |||||||||    
T  7955832 atttgagcaaatgaggtgaacctaacgagtcgaaccaagtggttcgtgaactttaaacgagccgaactcgagctagaaaaaaga-ttcgtttcgaactcg 7955734  T
Q  131 agtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttcca 209  Q
    |  |||||||||||| || | || |||||| ||||||||  |||||||||||  || || |||| ||||||||||||||    
T  7955733 aaccgagtttcgagccgaaccaattcttattgagtcgagtcgagctcagacagattcgactcgactcgactcatttcca 7955655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 13645689 - 13645817
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||||||||||| |||| ||  || |||||||  ||| | ||||||||||| ||| | ||||| ||||||| || ||||||||||||||||||||| |    
T  13645689 tgaacctaacgagctgaacagagttgctcgtgaattttaaatgagtcgaactcgagccggaaaaaaagtttgtttcaaactcgagtcgagtttcgagccg 13645788  T
Q  148 agcaaaatcttatcgagtcgagctgagct 176  Q
    | | || ||| |||||||||||| |||||    
T  13645789 aaccaattctaatcgagtcgagccgagct 13645817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 42936686 - 42936499
Alignment:
Q  26 tatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaaga--gtttgtgtc 123  Q
    |||||| ||||| ||||| || ||||||||  || | ||||| |||||||||||||| ||| ||||| ||||||| | || |||||| |  ||||||| |    
T  42936686 tatgtgctttgaacaaacgaattgaacctattgaactgaaccaaactgttcgtgaactttaaacgagccgaactcgaacttaaaaaaaaaagtttgtgac 42936587  T
Q  124 gaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
     |||||||   ||| |||||   |||| || ||||| ||||||||| ||| |||||||| ||| ||||||| ||||||||||||||||    
T  42936586 aaactcgaactgaggttcgaatcgagccaattcttaacgagtcgagttgaactcagacaagttcgattcgactcgactcatttccagc 42936499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 7994912 - 7994796
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    ||||||||||||| |||| |||||| ||||| ||| ||| |||||  ||||||  ||| ||||||| ||| || ||||||||||||||||||||||||||    
T  7994912 tgaacctaacgagtcgaatcgaactattcgtaaactttatacgagctgaactcgtgctaaaaaaag-gttcgtttcgaactcgagtcgagtttcgagctg 7994814  T
Q  148 agcaaaatcttatcgagt 165  Q
    |   || |||||||||||    
T  7994813 aatcaattcttatcgagt 7994796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 28005827 - 28005739
Alignment:
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||| |||||||||||||||| || | || |||||||||||||||  ||||||||| | ||| || |||| ||||||||||||||||    
T  28005827 cgaacttgagtcgagtttcgagccgaaccaattcttatcgagtcgagtcgagctcagagaggttcgactcgactcgactcatttccagc 28005739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 18349816 - 18349882
Alignment:
Q  109 aaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagc 175  Q
    |||| ||||||| ||||||||||||||||||| ||||| | |||| |||||||||| ||||||||||    
T  18349816 aaaaaagtttgtatcgaactcgagtcgagttttgagcttatcaaattcttatcgagccgagctgagc 18349882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 38061637 - 38061755
Alignment:
Q  93 tcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattc 192  Q
    |||||||| |||| ||||||  ||| |  ||||||||||||||| ||| |||| || | || ||||||||||||||   ||||||||||| ||| || ||    
T  38061637 tcgaactcgagcttaaaaaaaggttcgcttcgaactcgagtcgaattttgagccgaaccaattcttatcgagtcgaatcgagctcagacaggttcgactc 38061736  T
Q  193 gattcgactcatttccagc 211  Q
    || ||||||||||||||||    
T  38061737 gactcgactcatttccagc 38061755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 44595976 - 44595833
Alignment:
Q  62 cgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatc 161  Q
    ||||||||  ||||||||||| ||| ||||| ||||||  || | ||||||| ||| || |||||||| ||||||||||||| | || | || |||||||    
T  44595976 cgaaccgagttgttcgtgaactttaaacgagccgaacttaagtt-aaaaaagggttcgtatcgaactcaagtcgagtttcgaaccgaaccaattcttatc 44595878  T
Q  162 gagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||     |||||||||| ||| | ||||| ||||||||||||||||    
T  44595877 gagtcg-----agctcagacaggttcggttcgactcgactcatttccagc 44595833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 15662482 - 15662382
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||| | ||||| ||||| || ||||||||| ||| |||||| |||||||||||||| ||| ||||| |||||   ||||||||||| |||| ||||    
T  15662482 agttatgcgctttgaacaaacgaattgaacctaatgagtcgaaccaaactgttcgtgaactttaaacgagccgaacatgagctgaaaaaaaagttcgtgt 15662383  T
Q  123 c 123  Q
    |    
T  15662382 c 15662382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 39577784 - 39577640
Alignment:
Q  72 tgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    ||||||||||| ||| ||||| ||||||  ||||||||||| |||| ||||| |||||||  | ||  |||| |||||| || |||||  |||||| |      
T  39577784 tgttcgtgaactttaaacgagccgaacttgagctgaaaaaaaagttcgtgtcaaactcgaaccaaggctcgaactgagccaattcttaatgagtcgggtc 39577685  T
Q  172 gagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
    ||||||||| |  || ||||||| |||||||||||||||| ||||    
T  39577684 gagctcagatagattcgattcgactcgactcatttccagccctaa 39577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 47603463 - 47603551
Alignment:
Q  129 cgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    ||||||||||||||||| || | || ||||||||||| |||| || ||||| || ||| | ||||| |||||||||||||||| |||||    
T  47603463 cgagtcgagtttcgagccgaaccaattcttatcgagttgagccgaactcaggcaggttcggttcgactcgactcatttccagccctaat 47603551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 40002511 - 40002324
Alignment:
Q  24 gttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtc 123  Q
    |||||| | ||||| ||||| || ||||||||| |||| | ||  || ||||| ||||| ||| ||||||||||||  ||||| ||||| |||| |||||    
T  40002511 gttatgcgctttgaacaaacgaattgaacctaatgagctgcactaaattgttcatgaactttaaacgagtcgaacttgagctggaaaaaaagttcgtgtc 40002412  T
Q  124 gaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
     |||| ||  |||| ||||| | |||| || ||||| |||||||||  ||  | ||||  ||| ||||||| ||||||||||||||||    
T  40002411 aaacttgaaccgaggttcgaaccgagccaattcttaacgagtcgagtcgaatttagacgggttcgattcgactcgactcatttccagc 40002324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 47603408 - 47603470
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcga 96  Q
    |||||||| | |||| |||||||||||||||||||||| ||| |||||| ||| |||||||||    
T  47603408 ttgagcaaccgaactaaacctaacgagccgaaccgaacagtttgtgaactttaaacgagtcga 47603470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 3577081 - 3576984
Alignment:
Q  72 tgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgag 169  Q
    ||||||||||| ||| ||||| ||||||| || | || |||  |||||| |||||||| | |||||||||||||||| | || ||||||| |||||||    
T  3577081 tgttcgtgaactttaaacgagccgaactcgagttaaataaaatgtttgtatcgaactcaaatcgagtttcgagctgaaccaattcttatcaagtcgag 3576984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 15014058 - 15014017
Alignment:
Q  172 gagctcagacatgtttgattcgattcgactcatttccagctc 213  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  15014058 gagctcagacaagtttgattcgactcgactcatttccagctc 15014017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 15014196 - 15014107
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaa 112  Q
    ||||||||| ||||| ||||| || ||||  ||| |||||||||| || ||||||||||| ||| ||||| ||||||| || ||||||||    
T  15014196 agttatgtgctttgaacaaacgaattgaatataatgagccgaaccaaattgttcgtgaactttaaacgagccgaactcgagttgaaaaaa 15014107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 38061570 - 38061647
Alignment:
Q  55 aacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgag 132  Q
    ||||||| |||||||||||||||||||  ||| ||||| ||||||| |||| ||||||  ||| || |||||||||||    
T  38061570 aacgagctgaaccgaactgttcgtgaattttaaacgagccgaactcgagcttaaaaaatggttcgtttcgaactcgag 38061647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 36118367 - 36118269
Alignment:
Q  72 tgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagct 171  Q
    |||||||||||   | ||||||||||||| |||| ||||||  |||||| ||||||| |||| |||||| |||||||   || |||||||||||||||||    
T  36118367 tgttcgtgaactacaaacgagtcgaactcgagct-aaaaaaatgtttgtatcgaacttgagttgagttttgagctgaatcaattcttatcgagtcgagct 36118269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 19507993 - 19507937
Alignment:
Q  160 tcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaa 216  Q
    ||||||||||| ||||||||| | ||| || |||| |||||||||||||||| ||||    
T  19507993 tcgagtcgagccgagctcagataagttcgactcgactcgactcatttccagccctaa 19507937  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 24470594 - 24470650
Alignment:
Q  155 tcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||||||| |||| |||||||| || ||| | ||||| ||||||||||||||||    
T  24470594 tcttatcgagttgagccgagctcaggcaggttcggttcgactcgactcatttccagc 24470650  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 27077632 - 27077660
Alignment:
Q  190 ttcgattcgactcatttccagctctaatc 218  Q
    |||||||||||||||||||||||||||||    
T  27077632 ttcgattcgactcatttccagctctaatc 27077660  T

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Target: scaffold0316 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 18891 - 18714
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||| |||||||||||||      
T  18891 ttgagcaaccgaactgaacctaatgagccgaaccgaactgttcgtgaactttaaacgagccgaactcgagctgaaaaaatagttcgtgtcgaactcgaac 18792  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    ||||||| |||| || | || |||||||||||||||| ||||||| |||  || | ||||| ||||||||||||||||    
T  18791 cgagttttgagccgaaccaattcttatcgagtcgagccgagctcaaacagattcggttcgactcgactcatttccagc 18714  T

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Target: scaffold0658 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 211
Target Start/End: Original strand, 6363 - 6529
Alignment:
Q  34 ttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagt 133  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| |||||||           ||||||||||| |||| ||||||||||||||     
T  6363 ttgagcaaccgaactgaacctaacgagccgaaccgaactgttcgtgaactttagacg-----------agctgaaaaaatagttcgtgtcgaactcgagc 6451  T
Q  134 cgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    |||||||| | | || | || |||||||||||||||  |||||||| || |||  |||||| ||||||||||| ||||    
T  6452 cgagtttcaacccgaaccaattcttatcgagtcgagtcgagctcaggcaggttcaattcgactcgactcattttcagc 6529  T

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Target: scaffold0043 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 16658 - 16490
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgtcgaactcgagtcgagtttcgagctg 147  Q
    |||||||||| |||||||| ||||| ||||||||  ||| ||||| | ||||  |||  ||||||| |||||| || ||||||||||||||||||||| |    
T  16658 tgaacctaaccagccgaactgaactattcgtgaattttaaacgagccaaacttgagcctaaaaaag-gtttgtttcaaactcgagtcgagtttcgagccg 16560  T
Q  148 agcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagctctaat 217  Q
    | || | | || | |||| |||  ||||||||||| ||| ||||||| |||||||||||||||| |||||    
T  16559 aacatatttttgttgagttgagtcgagctcagacaggttcgattcgactcgactcatttccagccctaat 16490  T

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Target: scaffold0224 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 7908 - 8096
Alignment:
Q  23 agttatgtgatttgagcaaacaaactgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagctgaaaaaagagtttgtgt 122  Q
    ||||||| | ||||| ||||| || ||||||||| |||||||||| |||||||||||||| |||  |||| ||||||  |||| |||||| || | ||||    
T  7908 agttatgcgctttgaacaaacgaattgaacctaatgagccgaaccaaactgttcgtgaactttaagcgagccgaacttgagctaaaaaaaaagctcgtgt 8007  T
Q  123 cgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttccagc 211  Q
    | |||||||  |||| ||| | |  ||| || ||||| |||||| || |||||| | ||| ||| ||||||| ||||||||||||||||    
T  8008 caaactcgaaccgaggttcaaaccaagctaattcttaacgagtcaagttgagcttaaacaggttcgattcgactcgactcatttccagc 8096  T

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Target: scaffold0444 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 1386 - 1509
Alignment:
Q  48 tgaacctaacgagccgaaccgaactgttcgtgaaccttagacgagtcgaactccagct-gaaaaaagagtttgtgtcgaactcgagtcgagtttcgagct 146  Q
    |||||||||||||||||||| |  ||||||||||| ||| ||||| ||||||| || | || ||||| ||| || || |||||||||||||||||||||     
T  1386 tgaacctaacgagccgaaccaagttgttcgtgaactttaaacgagccgaactcaagttagagaaaag-gttcgtttcaaactcgagtcgagtttcgagcc 1484  T
Q  147 gagcaaaatcttatcgagtcgagct 171  Q
    || | || |||||||||||||||||    
T  1485 gaaccaattcttatcgagtcgagct 1509  T

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Target: scaffold0106 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 26600 - 26497
Alignment:
Q  108 aaaaagagtttgtgtcgaactcgagtcgagtttcgagctgagcaaaatcttatcgagtcgagctgagctcagacatgtttgattcgattcgactcatttc 207  Q
    ||||| |||| || ||||||||||||||| ||||||||||| | || |||||||||||||||  ||||||| ||| ||| ||||| | |||||| |||||    
T  26600 aaaaaaagttcgtttcgaactcgagtcgaatttcgagctgaaccaattcttatcgagtcgagtcgagctcaaacaggttcgattcaactcgactgatttc 26501  T
Q  208 cagc 211  Q
    ||||    
T  26500 cagc 26497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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