View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9833_low_43 (Length: 285)
Name: NF9833_low_43
Description: NF9833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9833_low_43 |
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Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 12 - 275
Target Start/End: Original strand, 55545194 - 55545457
Alignment:
| Q |
12 |
gttacaaagcagaacatcaataaaaatcctactcatcctgcactaattttcagtgaaaaaagattaaatactaggtcattatacttctctttatcataca |
111 |
Q |
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| T |
55545194 |
gttacaaagcagaacatcaataaaaatcctactcatcctgcactaattttcagtgaaaaaagattaaatactaggtcattatacttctctttatcataga |
55545293 |
T |
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| Q |
112 |
tattccatgggaggaagcactagctttctaaattgcacccattatttcaattcctatttccttgagcatgaaaatatcagtgggttgtgcttcaaactgg |
211 |
Q |
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| T |
55545294 |
tattccatgggaggaagcactagctttctaaattgcacccattatttcaattcctatttccttgagcatgaaaatatcagtgggttgtgcttcaaactgg |
55545393 |
T |
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| Q |
212 |
aaatatcaaacaattcgatgaacctctggtccgacactctggctttggcacctgcaaacctttg |
275 |
Q |
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| T |
55545394 |
aaatatcaaacaattcgatgaacctctggtccgacactctggctttggcacctgcaaacctttg |
55545457 |
T |
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