View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9833_low_63 (Length: 242)

Name: NF9833_low_63
Description: NF9833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9833_low_63
NF9833_low_63
[»] chr6 (43 HSPs)
chr6 (1-130)||(30727250-30727379)
chr6 (131-223)||(30728641-30728733)
chr6 (163-225)||(13057593-13057655)
chr6 (163-222)||(9020335-9020394)
chr6 (154-224)||(15540985-15541055)
chr6 (156-225)||(8717192-8717260)
chr6 (165-225)||(15367432-15367492)
chr6 (165-225)||(29754555-29754614)
chr6 (166-225)||(15346747-15346806)
chr6 (163-225)||(18322501-18322562)
chr6 (155-225)||(24338291-24338361)
chr6 (156-225)||(26068232-26068300)
chr6 (156-225)||(26932400-26932468)
chr6 (165-225)||(3629717-3629777)
chr6 (165-225)||(11982878-11982937)
chr6 (165-225)||(12195360-12195419)
chr6 (165-225)||(22491013-22491073)
chr6 (165-225)||(26065967-26066026)
chr6 (165-225)||(32280397-32280457)
chr6 (158-225)||(2628726-2628791)
chr6 (163-218)||(13040173-13040228)
chr6 (175-222)||(15530022-15530069)
chr6 (175-225)||(4816087-4816136)
chr6 (175-225)||(5273072-5273121)
chr6 (156-225)||(3394771-3394840)
chr6 (163-224)||(30967610-30967669)
chr6 (156-220)||(3631781-3631845)
chr6 (158-222)||(14458606-14458669)
chr6 (177-225)||(19704422-19704469)
chr6 (165-204)||(22857849-22857888)
chr6 (174-225)||(26065390-26065440)
chr6 (174-225)||(26085359-26085409)
chr6 (179-225)||(14507037-14507082)
chr6 (165-218)||(25480288-25480340)
chr6 (165-205)||(28037582-28037623)
chr6 (176-225)||(28241179-28241227)
chr6 (176-225)||(33309265-33309313)
chr6 (176-225)||(33311534-33311582)
chr6 (157-225)||(1230088-1230154)
chr6 (165-205)||(7294214-7294254)
chr6 (176-216)||(10584355-10584395)
chr6 (165-205)||(14466745-14466785)
chr6 (165-212)||(24501307-24501352)
[»] scaffold0005 (3 HSPs)
scaffold0005 (156-225)||(50391-50460)
scaffold0005 (163-225)||(52390-52452)
scaffold0005 (164-225)||(183487-183547)
[»] chr4 (65 HSPs)
chr4 (156-225)||(14789270-14789339)
chr4 (165-225)||(6765269-6765329)
chr4 (158-225)||(49088978-49089045)
chr4 (163-225)||(14787278-14787340)
chr4 (156-222)||(36921335-36921401)
chr4 (163-225)||(38928028-38928090)
chr4 (155-225)||(53405560-53405630)
chr4 (156-225)||(22802574-22802643)
chr4 (163-222)||(36919433-36919492)
chr4 (163-225)||(37089216-37089278)
chr4 (156-222)||(16453733-16453799)
chr4 (163-225)||(22800709-22800771)
chr4 (165-222)||(16455651-16455708)
chr4 (165-225)||(2891714-2891774)
chr4 (165-225)||(24446508-24446568)
chr4 (165-225)||(47275146-47275206)
chr4 (158-222)||(47868832-47868895)
chr4 (174-225)||(3824464-3824515)
chr4 (158-225)||(3937125-3937191)
chr4 (158-225)||(22780211-22780277)
chr4 (163-225)||(17662096-17662156)
chr4 (163-225)||(19096304-19096366)
chr4 (163-225)||(37312928-37312990)
chr4 (156-225)||(22782574-22782642)
chr4 (157-225)||(8631258-8631324)
chr4 (165-205)||(27499490-27499530)
chr4 (181-225)||(38270016-38270060)
chr4 (158-225)||(40091258-40091326)
chr4 (174-225)||(22046542-22046592)
chr4 (158-225)||(24348628-24348693)
chr4 (175-225)||(6133259-6133309)
chr4 (152-225)||(18409185-18409259)
chr4 (175-225)||(18847579-18847628)
chr4 (163-225)||(33415338-33415400)
chr4 (176-225)||(2484731-2484779)
chr4 (154-223)||(5635313-5635380)
chr4 (176-225)||(9176331-9176379)
chr4 (168-225)||(11435382-11435438)
chr4 (164-225)||(14633745-14633805)
chr4 (156-225)||(47210634-47210702)
chr4 (176-225)||(47563181-47563230)
chr4 (165-225)||(51015672-51015732)
chr4 (165-225)||(5101338-5101398)
chr4 (165-225)||(11437790-11437849)
chr4 (165-225)||(16931637-16931696)
chr4 (173-225)||(41997909-41997961)
chr4 (158-214)||(44599679-44599734)
chr4 (158-225)||(619297-619364)
chr4 (158-225)||(9173986-9174051)
chr4 (152-218)||(18311208-18311275)
chr4 (174-225)||(22044247-22044297)
chr4 (178-225)||(22132248-22132294)
chr4 (163-225)||(40637500-40637562)
chr4 (175-222)||(52942346-52942393)
chr4 (163-218)||(56030886-56030941)
chr4 (163-225)||(31849444-31849504)
chr4 (176-225)||(11006111-11006159)
chr4 (176-225)||(11008425-11008473)
chr4 (181-222)||(12395712-12395753)
chr4 (181-222)||(12400674-12400715)
chr4 (178-223)||(22134476-22134520)
chr4 (176-225)||(38409631-38409679)
chr4 (165-205)||(9864150-9864190)
chr4 (156-216)||(16933985-16934044)
chr4 (165-205)||(25613816-25613856)
[»] chr7 (49 HSPs)
chr7 (155-225)||(42223534-42223604)
chr7 (163-225)||(9027038-9027099)
chr7 (163-225)||(28487936-28487997)
chr7 (156-225)||(4295778-4295847)
chr7 (156-225)||(7471818-7471886)
chr7 (156-217)||(13099314-13099375)
chr7 (156-225)||(38394369-38394437)
chr7 (165-225)||(25542911-25542970)
chr7 (158-225)||(11759510-11759576)
chr7 (163-225)||(31434896-31434959)
chr7 (176-225)||(7092070-7092119)
chr7 (156-225)||(7094298-7094366)
chr7 (156-225)||(20297745-20297813)
chr7 (156-225)||(21678440-21678509)
chr7 (156-225)||(28485948-28486016)
chr7 (156-225)||(44724956-44725025)
chr7 (165-225)||(1606762-1606821)
chr7 (156-223)||(24748970-24749038)
chr7 (163-225)||(44947-45008)
chr7 (175-225)||(7349134-7349183)
chr7 (175-225)||(7351508-7351557)
chr7 (163-225)||(20626416-20626477)
chr7 (163-225)||(20630307-20630368)
chr7 (163-225)||(20642726-20642787)
chr7 (181-223)||(22251452-22251494)
chr7 (155-225)||(26804889-26804959)
chr7 (163-225)||(27306080-27306142)
chr7 (158-223)||(40836582-40836647)
chr7 (163-225)||(42330850-42330912)
chr7 (184-225)||(39145856-39145897)
chr7 (156-225)||(40550212-40550280)
chr7 (177-225)||(36012-36059)
chr7 (177-225)||(1850364-1850411)
chr7 (173-225)||(20299843-20299894)
chr7 (158-210)||(31153690-31153741)
chr7 (174-225)||(443976-444027)
chr7 (158-225)||(7469863-7469928)
chr7 (174-225)||(37411982-37412033)
chr7 (175-225)||(1046774-1046823)
chr7 (156-225)||(1049126-1049195)
chr7 (168-222)||(9679441-9679495)
chr7 (163-225)||(38397022-38397082)
chr7 (163-225)||(48458036-48458096)
chr7 (176-225)||(1502832-1502880)
chr7 (165-225)||(22137462-22137521)
chr7 (165-205)||(24465929-24465969)
chr7 (166-205)||(25357331-25357371)
chr7 (165-205)||(27832494-27832534)
chr7 (165-225)||(40552489-40552548)
[»] chr2 (34 HSPs)
chr2 (163-225)||(27105146-27105208)
chr2 (156-224)||(11739418-11739486)
chr2 (175-225)||(17849461-17849511)
chr2 (175-225)||(19007984-19008034)
chr2 (156-222)||(21520531-21520597)
chr2 (156-225)||(36560978-36561046)
chr2 (165-225)||(22287187-22287247)
chr2 (165-225)||(22874453-22874513)
chr2 (165-225)||(36558727-36558786)
chr2 (165-225)||(42923357-42923417)
chr2 (158-225)||(19501842-19501907)
chr2 (165-220)||(37962797-37962852)
chr2 (163-222)||(43623427-43623486)
chr2 (158-205)||(45238841-45238888)
chr2 (187-225)||(5375218-5375256)
chr2 (175-225)||(13909902-13909951)
chr2 (168-218)||(28196986-28197036)
chr2 (163-225)||(45279846-45279907)
chr2 (176-225)||(19504194-19504242)
chr2 (156-205)||(20146456-20146505)
chr2 (157-225)||(22707593-22707662)
chr2 (176-225)||(23452094-23452142)
chr2 (165-225)||(3022516-3022576)
chr2 (181-225)||(34979456-34979500)
chr2 (165-225)||(45332026-45332085)
chr2 (163-225)||(7462793-7462856)
chr2 (154-225)||(22162864-22162935)
chr2 (175-225)||(35215449-35215498)
chr2 (165-222)||(6258668-6258725)
chr2 (165-225)||(14837612-14837673)
chr2 (176-225)||(28459054-28459103)
chr2 (176-225)||(38020424-38020473)
chr2 (176-225)||(42453826-42453874)
chr2 (165-205)||(42923299-42923339)
[»] chr5 (56 HSPs)
chr5 (157-222)||(36402168-36402233)
chr5 (165-225)||(27912909-27912969)
chr5 (165-225)||(34530565-34530625)
chr5 (156-225)||(18467057-18467126)
chr5 (165-225)||(18469382-18469442)
chr5 (156-223)||(27910808-27910875)
chr5 (163-225)||(21948402-21948464)
chr5 (163-225)||(38959976-38960037)
chr5 (165-222)||(16776531-16776588)
chr5 (156-225)||(18511053-18511122)
chr5 (165-225)||(21289127-21289187)
chr5 (157-225)||(39798403-39798470)
chr5 (165-225)||(41585586-41585646)
chr5 (158-225)||(4410394-4410459)
chr5 (175-225)||(2724261-2724311)
chr5 (156-225)||(6745441-6745510)
chr5 (165-222)||(24127228-24127285)
chr5 (165-225)||(3372983-3373042)
chr5 (157-225)||(6747677-6747745)
chr5 (166-222)||(18597016-18597072)
chr5 (157-225)||(34476892-34476958)
chr5 (165-225)||(36208941-36209001)
chr5 (173-225)||(40221897-40221949)
chr5 (163-218)||(39854862-39854917)
chr5 (163-225)||(21684298-21684358)
chr5 (156-225)||(31472455-31472525)
chr5 (165-222)||(2954786-2954843)
chr5 (176-225)||(10587188-10587236)
chr5 (156-225)||(15356687-15356755)
chr5 (176-225)||(17818352-17818401)
chr5 (156-225)||(23665419-23665487)
chr5 (156-225)||(23793100-23793168)
chr5 (176-225)||(34479275-34479323)
chr5 (165-225)||(15354420-15354479)
chr5 (165-225)||(23741703-23741762)
chr5 (165-225)||(25921321-25921379)
chr5 (156-225)||(26098126-26098197)
chr5 (165-225)||(31179219-31179278)
chr5 (163-222)||(658208-658266)
chr5 (167-222)||(2818186-2818240)
chr5 (174-225)||(12555773-12555824)
chr5 (158-205)||(31465832-31465879)
chr5 (178-225)||(31545456-31545502)
chr5 (175-225)||(2175274-2175323)
chr5 (175-225)||(15552619-15552668)
chr5 (156-225)||(25804397-25804466)
chr5 (163-225)||(38882461-38882521)
chr5 (165-225)||(1189460-1189518)
chr5 (167-224)||(10474176-10474233)
chr5 (176-225)||(10750073-10750121)
chr5 (176-225)||(10757549-10757597)
chr5 (155-212)||(15143843-15143900)
chr5 (176-225)||(37705644-37705693)
chr5 (176-224)||(696244-696292)
chr5 (165-225)||(4237001-4237059)
chr5 (163-222)||(6756863-6756923)
[»] chr3 (64 HSPs)
chr3 (156-225)||(18099007-18099076)
chr3 (165-225)||(15781227-15781287)
chr3 (163-223)||(36012179-36012239)
chr3 (163-222)||(18096744-18096803)
chr3 (156-222)||(42990655-42990720)
chr3 (163-225)||(53915342-53915404)
chr3 (156-225)||(3315034-3315103)
chr3 (156-225)||(6065630-6065698)
chr3 (165-222)||(18163017-18163074)
chr3 (156-225)||(28101845-28101914)
chr3 (156-225)||(43423305-43423374)
chr3 (156-225)||(53917503-53917572)
chr3 (165-225)||(747112-747171)
chr3 (158-222)||(1321835-1321898)
chr3 (166-218)||(45883298-45883350)
chr3 (163-225)||(880088-880151)
chr3 (163-225)||(1313755-1313818)
chr3 (175-225)||(32219436-32219486)
chr3 (163-224)||(9604451-9604511)
chr3 (156-225)||(10621363-10621431)
chr3 (156-225)||(11168455-11168522)
chr3 (165-222)||(24980063-24980120)
chr3 (176-225)||(27635515-27635564)
chr3 (156-225)||(43226430-43226498)
chr3 (163-204)||(47701524-47701565)
chr3 (157-205)||(43421258-43421306)
chr3 (165-224)||(5926615-5926674)
chr3 (165-224)||(28412876-28412934)
chr3 (154-225)||(41849406-41849475)
chr3 (163-225)||(5192004-5192064)
chr3 (163-225)||(5522470-5522530)
chr3 (156-218)||(25533784-25533845)
chr3 (165-223)||(28761293-28761351)
chr3 (165-223)||(38210726-38210783)
chr3 (176-222)||(42992737-42992783)
chr3 (176-225)||(456261-456309)
chr3 (176-225)||(458638-458686)
chr3 (176-225)||(1626543-1626592)
chr3 (176-225)||(10084245-10084293)
chr3 (176-225)||(10191168-10191216)
chr3 (176-225)||(10955883-10955931)
chr3 (176-225)||(51674626-51674675)
chr3 (176-225)||(53893910-53893958)
chr3 (157-225)||(6063281-6063348)
chr3 (177-225)||(38890394-38890441)
chr3 (165-225)||(50494352-50494411)
chr3 (174-225)||(5886551-5886601)
chr3 (174-225)||(5900024-5900074)
chr3 (158-225)||(11170724-11170789)
chr3 (175-214)||(28181362-28181401)
chr3 (175-225)||(880312-880362)
chr3 (163-225)||(22114147-22114207)
chr3 (175-225)||(25389260-25389309)
chr3 (176-225)||(561640-561689)
chr3 (176-225)||(10958179-10958227)
chr3 (165-205)||(29897533-29897574)
chr3 (165-222)||(32263887-32263944)
chr3 (168-225)||(43228640-43228696)
chr3 (174-222)||(4666865-4666913)
chr3 (165-205)||(17795623-17795663)
chr3 (165-205)||(19104063-19104103)
chr3 (174-222)||(25688015-25688063)
chr3 (165-225)||(31151689-31151748)
chr3 (173-205)||(47148759-47148791)
[»] chr8 (40 HSPs)
chr8 (165-225)||(33541261-33541321)
chr8 (163-225)||(15073136-15073198)
chr8 (165-225)||(15185570-15185630)
chr8 (157-225)||(28283060-28283127)
chr8 (165-222)||(14477677-14477734)
chr8 (156-225)||(15068406-15068475)
chr8 (156-225)||(18811137-18811205)
chr8 (156-225)||(27827414-27827482)
chr8 (156-225)||(41383088-41383157)
chr8 (165-225)||(35872307-35872367)
chr8 (166-225)||(13858341-13858400)
chr8 (175-225)||(14808185-14808235)
chr8 (165-223)||(15956379-15956437)
chr8 (163-225)||(27829725-27829786)
chr8 (165-225)||(3874422-3874481)
chr8 (165-225)||(21482732-21482792)
chr8 (165-225)||(24873045-24873104)
chr8 (165-225)||(25952944-25953004)
chr8 (156-223)||(21480926-21480993)
chr8 (166-225)||(27106754-27106813)
chr8 (165-220)||(27911506-27911561)
chr8 (165-220)||(27957925-27957980)
chr8 (158-225)||(43530544-43530610)
chr8 (178-225)||(44721272-44721318)
chr8 (165-223)||(183246-183304)
chr8 (163-225)||(3883440-3883501)
chr8 (163-225)||(15809647-15809707)
chr8 (163-225)||(18813311-18813372)
chr8 (176-225)||(30480365-30480414)
chr8 (157-222)||(22684489-22684555)
chr8 (158-225)||(32339739-32339804)
chr8 (155-225)||(2467975-2468044)
chr8 (175-225)||(5372042-5372092)
chr8 (156-222)||(14419032-14419098)
chr8 (175-225)||(43082402-43082451)
chr8 (176-225)||(4424448-4424496)
chr8 (176-225)||(36865963-36866012)
chr8 (165-205)||(16833978-16834018)
chr8 (165-205)||(17847956-17847996)
chr8 (181-225)||(37214131-37214175)
[»] chr1 (58 HSPs)
chr1 (165-225)||(2949085-2949145)
chr1 (165-225)||(39932448-39932508)
chr1 (158-225)||(6995539-6995606)
chr1 (163-222)||(39462893-39462952)
chr1 (158-224)||(18839957-18840023)
chr1 (165-225)||(24326036-24326095)
chr1 (165-225)||(25251127-25251187)
chr1 (165-225)||(50248423-50248483)
chr1 (156-222)||(16429324-16429390)
chr1 (156-225)||(50078632-50078702)
chr1 (156-225)||(16226542-16226610)
chr1 (165-225)||(17324484-17324545)
chr1 (156-225)||(31424859-31424928)
chr1 (165-225)||(9459283-9459342)
chr1 (165-225)||(9463110-9463169)
chr1 (166-222)||(15823921-15823977)
chr1 (165-225)||(25248404-25248464)
chr1 (163-223)||(31422710-31422770)
chr1 (158-225)||(31490280-31490346)
chr1 (164-222)||(11457327-11457385)
chr1 (165-223)||(17319257-17319315)
chr1 (163-225)||(23816258-23816319)
chr1 (163-225)||(47906639-47906700)
chr1 (165-222)||(50307395-50307452)
chr1 (156-225)||(51757908-51757976)
chr1 (165-225)||(9240940-9241000)
chr1 (165-225)||(16231937-16231996)
chr1 (165-225)||(23786213-23786272)
chr1 (174-222)||(27336799-27336847)
chr1 (157-225)||(46431546-46431613)
chr1 (173-225)||(47451999-47452051)
chr1 (163-225)||(4131225-4131288)
chr1 (158-225)||(13358947-13359012)
chr1 (163-225)||(13762209-13762271)
chr1 (158-225)||(14097814-14097881)
chr1 (158-225)||(28842867-28842932)
chr1 (165-225)||(30780414-30780476)
chr1 (158-225)||(51750412-51750477)
chr1 (165-223)||(13215454-13215512)
chr1 (156-222)||(28206909-28206975)
chr1 (165-222)||(3579437-3579493)
chr1 (156-222)||(27338970-27339038)
chr1 (165-218)||(40134319-40134372)
chr1 (156-225)||(47177736-47177804)
chr1 (156-224)||(20291831-20291897)
chr1 (165-225)||(47180087-47180146)
chr1 (163-225)||(10399673-10399735)
chr1 (175-222)||(12302367-12302414)
chr1 (167-222)||(16432758-16432813)
chr1 (163-225)||(13447121-13447181)
chr1 (183-225)||(17324442-17324484)
chr1 (163-225)||(31735369-31735430)
chr1 (156-225)||(2617891-2617958)
chr1 (176-225)||(15294694-15294742)
chr1 (181-222)||(38925350-38925391)
chr1 (165-222)||(41647292-41647349)
chr1 (173-225)||(17185993-17186045)
chr1 (173-225)||(25128241-25128293)
[»] scaffold0011 (1 HSPs)
scaffold0011 (163-225)||(35973-36035)
[»] scaffold0031 (1 HSPs)
scaffold0031 (163-220)||(79570-79627)
[»] scaffold0339 (1 HSPs)
scaffold0339 (165-225)||(4371-4431)
[»] scaffold0267 (1 HSPs)
scaffold0267 (165-225)||(408-467)
[»] scaffold0025 (1 HSPs)
scaffold0025 (176-222)||(69149-69195)
[»] scaffold0131 (2 HSPs)
scaffold0131 (165-206)||(15392-15433)
scaffold0131 (176-225)||(14247-14295)
[»] scaffold0127 (1 HSPs)
scaffold0127 (156-225)||(12712-12780)
[»] scaffold0472 (1 HSPs)
scaffold0472 (165-225)||(6581-6640)
[»] scaffold0045 (1 HSPs)
scaffold0045 (163-223)||(85609-85669)
[»] scaffold0068 (1 HSPs)
scaffold0068 (163-225)||(29552-29612)
[»] scaffold0004 (1 HSPs)
scaffold0004 (156-222)||(80242-80308)
[»] scaffold0891 (1 HSPs)
scaffold0891 (176-225)||(4535-4583)
[»] scaffold0250 (1 HSPs)
scaffold0250 (176-225)||(3261-3309)
[»] scaffold0140 (2 HSPs)
scaffold0140 (156-225)||(22499-22567)
scaffold0140 (165-225)||(24774-24833)
[»] scaffold1674 (1 HSPs)
scaffold1674 (165-225)||(1298-1357)
[»] scaffold0154 (1 HSPs)
scaffold0154 (163-225)||(11318-11380)
[»] scaffold0370 (1 HSPs)
scaffold0370 (175-225)||(1309-1358)
[»] scaffold1899 (1 HSPs)
scaffold1899 (168-221)||(1-53)
[»] scaffold0038 (1 HSPs)
scaffold0038 (176-225)||(41341-41389)


Alignment Details
Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 30727250 - 30727379
Alignment:
Q  1 ttttgctttatctgtcactatttcaactttttctaatagtcacatgctaaaatttctatataacttactcaatcaccgattcataaacttcacggctaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30727250 ttttgctttatctgtcactatttcaactttttctaatagtcacatgctaaaatttctatataacttactcaatcaccgattcataaatttcacggctaaa 30727349  T
Q  101 cagaccagaatgaggaaaattgaagattat 130  Q
    ||||||||||||||||||||||||||||||    
T  30727350 cagaccagaatgaggaaaattgaagattat 30727379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 30728641 - 30728733
Alignment:
Q  131 aaacacatgaattaatggcaaaccaaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  30728641 aaacgcatgaattaatggcaaaccaaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaa 30728733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 13057655 - 13057593
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  13057655 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaaggataatcaagc 13057593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 9020394 - 9020335
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  9020394 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagagataatca 9020335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 15540985 - 15541055
Alignment:
Q  154 caaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    |||||||| |||| |||| |||||||||| |||||||||||||||||||||| ||| |||||||| |||||    
T  15540985 caaattgttgcgacttcgatgaaaaatcaaaccaataacaaacttgatgtgtggagcaagggatagtcaag 15541055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 8717192 - 8717260
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  8717192 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 8717260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 15367492 - 15367432
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| | | |||||||||||    
T  15367492 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcatgtgataatcaagc 15367432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 29754555 - 29754614
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  29754555 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 29754614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 15346806 - 15346747
Alignment:
Q  166 aattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||||||||||||||||||||||||||| ||  ||| |||||||||||    
T  15346806 aattcgatgaaaaatcacaccaataacaaacttgatgtgtggaacaagtgataatcaagc 15346747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 18322562 - 18322501
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||  |||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  18322562 gcgaattctatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 18322501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 24338291 - 24338361
Alignment:
Q  155 aaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| | ||||||| |||||||||||| |||||||||||||||||||| ||| ||| |||| ||||||    
T  24338291 aaattgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagagatagtcaagc 24338361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 26068232 - 26068300
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  26068232 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 26068300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 26932400 - 26932468
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||| | |||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  26932400 aattgttgtgaatttgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 26932468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 3629717 - 3629777
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| ||| || ||||||||||||    
T  3629717 gaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaaaggataatcaagc 3629777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 11982878 - 11982937
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||| ||||||||||    
T  11982878 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaaggaataatcaagc 11982937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 12195360 - 12195419
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  12195360 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 12195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 22491073 - 22491013
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||  | ||||||||||||    
T  22491073 gaattcgatgaaaaatcacaccaataacaaacttaatgtgtggagctaaggataatcaagc 22491013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 26065967 - 26066026
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  26065967 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 26066026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 32280457 - 32280397
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| | ||||||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  32280457 gaattcgataaaaaatcacacaaataacaaacttgatgtatggagtaagtgataatcaagc 32280397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 2628726 - 2628791
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  2628726 ttgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 2628791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 13040228 - 13040173
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| ||| || |||||    
T  13040228 gcgaattcgatgaaaaatcacactaataacaaacttgatgtgtggagcaatggata 13040173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 15530022 - 15530069
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||||    
T  15530022 aaaactcacaccaataacaaacttgatgtgtggagtaaggaataatca 15530069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 4816087 - 4816136
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  4816087 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 4816136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 5273072 - 5273121
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  5273072 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 5273121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 3394840 - 3394771
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||| ||| ||||||||||| || |||||||||| ||| || ||||||||||||    
T  3394840 aattgttgcgaattcgatgagaaaacacaccaataaaaatcttgatgtgtggagaaatggataatcaagc 3394771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 30967669 - 30967610
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||    
T  30967669 gcgaattcgttgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagagataatcaag 30967610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 3631781 - 3631845
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataat 220  Q
    |||||| | ||||||| ||||||| |||||||||||||||||||| |||| ||| ||| ||||||    
T  3631781 aattgttgtgaattcgatgaaaaaacacaccaataacaaacttgacgtgtggagcaagtgataat 3631845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 14458606 - 14458669
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||| ||||||||| |||||||||||||||||||  | |||||||||| |||||| |||||||||    
T  14458606 ttgttgcgaattcgatgaaaaatcacaccaataa-tagcttgatgtgtggagtaatggataatca 14458669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 19704422 - 19704469
Alignment:
Q  177 aaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  19704422 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 19704469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 22857849 - 22857888
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtg 204  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  22857849 gaattcgttgaaaaatcacaccaataaaatacttgatgtg 22857888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 26065440 - 26065390
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||| ||||||    
T  26065440 gaaaaatcacaccaataac-aacttgatgtgtggagcaagggatagtcaagc 26065390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 26085409 - 26085359
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||| ||||||    
T  26085409 gaaaaatcacaccaataac-aacttgatgtgtggagcaagggatagtcaagc 26085359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 14507037 - 14507082
Alignment:
Q  179 atcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||| |||||||||| ||| |||||||||||||||    
T  14507037 atcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 14507082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 25480340 - 25480288
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    ||||||| ||||||||||||||||||| | | ||||||||| ||||||||||||    
T  25480340 gaattcgatgaaaaatcacaccaataa-atatttgatgtgtagagtaagggata 25480288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 28037582 - 28037623
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaa-acttgatgtgt 205  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  28037582 gaattcgttgaaaaatcacaccaataaaaatacttgatgtgt 28037623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 28241179 - 28241227
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  28241179 aaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 28241227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 33309313 - 33309265
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  33309313 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagc 33309265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 33311582 - 33311534
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  33311582 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagc 33311534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 1230088 - 1230154
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||||| | |||||||||||||||||| |||||||||||| ||  ||| |||||||||||    
T  1230088 attgttgcgaattcgat-aaaaatcacaccaataac-aacttgatgtgtggatcaagagataatcaagc 1230154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 7294254 - 7294214
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  7294254 gaattcgttaaaaaatcacaccaataaaatacttgatgtgt 7294214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 10584395 - 10584355
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaaggga 216  Q
    |||| ||||||||||||||||||||||||| ||| ||||||    
T  10584395 aaaaccacaccaataacaaacttgatgtgtggagcaaggga 10584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 14466785 - 14466745
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||| ||||||||||||||||||| ||| |||||||||    
T  14466785 gaattcgatgaaaaatcacaccaataataaatttgatgtgt 14466745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 24501307 - 24501352
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaa 212  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  24501307 gaattcgttgaaaaatcacaccaata--aaacatgatgtgtagagtaa 24501352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 50460 - 50391
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  50460 aattgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 50391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 52452 - 52390
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  52452 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 52390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 183487 - 183547
Alignment:
Q  164 cgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||| ||| |||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  183487 cgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 183547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 14789270 - 14789339
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14789270 aattgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 14789339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 6765329 - 6765269
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6765329 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagtaagggataatcaagc 6765269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 49089045 - 49088978
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  49089045 ttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgttgagtaagggatagtcaagc 49088978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 14787278 - 14787340
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14787278 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 14787340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 36921335 - 36921401
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36921335 aattgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatca 36921401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 38928028 - 38928090
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  38928028 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 38928090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 53405630 - 53405560
Alignment:
Q  155 aaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  53405630 aaattgttgcgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagggataatcaagc 53405560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 22802574 - 22802643
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  22802574 aattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 22802643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 36919433 - 36919492
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36919433 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatca 36919492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 37089216 - 37089278
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  37089216 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaatggataatcaagc 37089278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 16453799 - 16453733
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  16453799 aattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataatca 16453733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 22800709 - 22800771
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||| |||||||| ||||||    
T  22800709 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtggggagcaagggatagtcaagc 22800771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 16455708 - 16455651
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  16455708 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataatca 16455651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 2891774 - 2891714
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| || | ||||||||||    
T  2891774 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaagaataatcaagc 2891714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 24446508 - 24446568
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| ||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  24446508 gaattcgatgagaaaacacaccaataacaaacttgatgtgtgaagtaagggataatcaagc 24446568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 47275206 - 47275146
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||  ||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  47275206 gaattcgttgtgaaaacacatcaataacaaacttgatgtgtggagtaagggataatcaagc 47275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 47868895 - 47868832
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  47868895 ttgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatca 47868832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 3824464 - 3824515
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  3824464 gaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 3824515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 3937125 - 3937191
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||  ||| |||||||||||||||    
T  3937125 ttgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgaggagcaagggataatcaagc 3937191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22780211 - 22780277
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  22780211 ttgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 22780277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 17662096 - 17662156
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  17662096 gcgaattcgttgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 17662156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 19096366 - 19096304
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||| ||||| ||| ||||||||| |||||||||||| ||||||    
T  19096366 gcgaattcgatgaaaaatcacactaataataaatttgatgtgtggagtaagggatagtcaagc 19096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 37312928 - 37312990
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| | ||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||    
T  37312928 gcgaatttgatgaaaaatcacaccaataataaacttgatgtgtggagcaagggatagtcaagc 37312990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 22782574 - 22782642
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| |||||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  22782574 aattgttgcgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 22782642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 8631258 - 8631324
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  8631258 attgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 8631324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 27499530 - 27499490
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  27499530 gaattcgatgaaaaatcacaccaataacaaacttgatgtgt 27499490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 38270016 - 38270060
Alignment:
Q  181 cacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  38270016 cacaccaataacaaacttgatgtgtggagtaagggatagtcaagc 38270060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 40091258 - 40091326
Alignment:
Q  158 ttgtagcgaattcgttgaaaaat-cacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||||| ||| ||  |||||||||||    
T  40091258 ttgttgcgaattcgatgaaaaattcacaccaataacaaacttgatgtgtggagcaaaagataatcaagc 40091326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 22046542 - 22046592
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  22046542 gaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 22046592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 24348693 - 24348628
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  24348693 ttgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 24348628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 6133309 - 6133259
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| |||||||||||||||||||||||| ||| |||| ||||||||||    
T  6133309 aaaaattacaccaataacaaacttgatgtgtggagcaaggaataatcaagc 6133259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 18409185 - 18409259
Alignment:
Q  152 accaaattgtagcgaattcgttgaaaa-atcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||| | ||||||| |||||| ||||||||||||| ||||||||||||| ||| ||| |||| ||||||    
T  18409185 accaaattgttgtgaattcgatgaaaaaatcacaccaataataaacttgatgtgtggagcaagtgatagtcaagc 18409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 18847628 - 18847579
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  18847628 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 18847579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 33415338 - 33415400
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| || ||| ||||||||| ||||||||||||||||||| ||| |||||||| ||||||    
T  33415338 gcgaatccgatgagaaatcacacaaataacaaacttgatgtgtggagcaagggatagtcaagc 33415400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 2484731 - 2484779
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  2484731 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 2484779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 5635313 - 5635380
Alignment:
Q  154 caaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    |||| ||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||    
T  5635313 caaactgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaa 5635380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 9176331 - 9176379
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  9176331 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 9176379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 11435438 - 11435382
Alignment:
Q  168 ttcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  11435438 ttcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 11435382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 14633805 - 14633745
Alignment:
Q  164 cgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||| ||| |||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  14633805 cgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 14633745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 47210634 - 47210702
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||||||  |||||||||||||||| |||||||||||| ||| ||| |||||| ||||    
T  47210634 aattgttgcgaattcgttgtgaaatcacaccaataac-aacttgatgtgtggagcaagagataataaagc 47210702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 47563230 - 47563181
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||||||||||||||||||| ||| |||| ||||||||||    
T  47563230 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataatcaagc 47563181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 51015732 - 51015672
Alignment:
Q  165 gaattcgtt-gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| |||||||||||||| |||||||||| ||| |||||||||||||||    
T  51015732 gaattcgttcgaaaaaacacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 51015672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 5101398 - 5101338
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| ||  |||||||| ||||||    
T  5101398 gaattcgatgagaaaacacaccaataacaaacttgatgtgtggatcaagggatagtcaagc 5101338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 11437849 - 11437790
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||| | ||| ||| |||||||||||    
T  11437849 gaattcgatgaaaaatcacaccaataac-aacttgatgtatggagcaagagataatcaagc 11437790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 16931637 - 16931696
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| ||||| |||||| ||| |||||||||| ||||    
T  16931637 gaattcgatgaaaaatcacaccaataac-aacttaatgtgtggagcaagggataattaagc 16931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 41997961 - 41997909
Alignment:
Q  173 tgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||| ||||||||||||| ||| ||| |||||||||||    
T  41997961 tgaaaaaacacaccaataataaacttgatgtgtggagaaagtgataatcaagc 41997909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 44599679 - 44599734
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagg 214  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||| ||| ||||    
T  44599679 ttgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagg 44599734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 619297 - 619364
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||| ||||| ||| ||| ||||||||||| ||| ||||||||| |||||||||||| ||||||    
T  619297 ttgttgcggattcgatgagaaaacacaccaataataaatttgatgtgtggagtaagggatagtcaagc 619364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 9173986 - 9174051
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||| |||||| |||||||| |||||||||| ||| |||||||||||||||    
T  9173986 ttgttgcgaattcgatgaaaa-tcacactaataacaa-cttgatgtgtggagcaagggataatcaagc 9174051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 18311208 - 18311275
Alignment:
Q  152 accaaattgtagcgaattcgttgaaaa-atcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    |||||||||| | ||||||| |||||| ||||||||||||| ||||||||||||| ||| ||| ||||    
T  18311208 accaaattgttgtgaattcgatgaaaaaatcacaccaataataaacttgatgtgtggagcaagtgata 18311275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 22044247 - 22044297
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||| |||||||||| ||| |||||||||||||||    
T  22044247 gaaaaataacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 22044297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 22132248 - 22132294
Alignment:
Q  178 aatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  22132248 aatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 22132294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 40637562 - 40637500
Alignment:
Q  163 gcgaattcgttgaaaa-atcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||| || |||||||||||||||| |||||||||| ||| |||| ||||||||||    
T  40637562 gcgaattcgttgagaatatcacaccaataacaa-cttgatgtgtggagcaaggaataatcaagc 40637500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 52942346 - 52942393
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||||| ||||||||| ||||||||| ||||||| ||||||||    
T  52942346 aaaaatcacacaaataacaaatttgatgtgtggagtaagagataatca 52942393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 56030941 - 56030886
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||| ||| ||| ||||    
T  56030941 gcgaattcgatgaaaaatcacaccaataataaacttgatatgtggagcaagagata 56030886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 31849444 - 31849504
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  31849444 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 31849504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 11006111 - 11006159
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| |||||||||||||| |||||||||| ||| |||||||||||||||    
T  11006111 aaaaacacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 11006159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 11008425 - 11008473
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| |||||||||||||| |||||||||| ||| |||||||||||||||    
T  11008425 aaaaacacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 11008473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 12395712 - 12395753
Alignment:
Q  181 cacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||    
T  12395712 cacaccaataacaaacttgatgtgtggagcaagtgataatca 12395753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 12400674 - 12400715
Alignment:
Q  181 cacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||    
T  12400674 cacaccaataacaaacttgatgtgtggagcaagtgataatca 12400715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 22134476 - 22134520
Alignment:
Q  178 aatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||    
T  22134476 aatcacaccaataacaa-cttgatgtgtggagcaagggataatcaa 22134520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 38409679 - 38409631
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| |||||||||||||| |||||||||| ||| |||||||||||||||    
T  38409679 aaaaacacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 38409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 9864190 - 9864150
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    |||||||||||||||||||| |||||| | |||||||||||    
T  9864190 gaattcgttgaaaaatcacatcaataaaatacttgatgtgt 9864150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 16933985 - 16934044
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaaggga 216  Q
    |||||| | ||||||| |||||||||||||||||||| ||||| |||||| ||| ||||||    
T  16933985 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttaatgtgtggagcaaggga 16934044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 25613816 - 25613856
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    |||||||||| |||| ||||||||||| |||||||||||||    
T  25613816 gaattcgttgcaaaaacacaccaataaaaaacttgatgtgt 25613856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 42223604 - 42223534
Alignment:
Q  155 aaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||| | ||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  42223604 aaattgttgcgaattcgataaaaaaacacaccaataacaaacttgatgtgtggagtaagggataatcaagc 42223534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 9027038 - 9027099
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  9027038 gcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 9027099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 28487997 - 28487936
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  28487997 gcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 28487936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 4295778 - 4295847
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||||| ||| |||| || |||||||    
T  4295778 aattgttgcaaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaggaatcatcaagc 4295847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 7471818 - 7471886
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||  |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  7471818 aattgttgcgaattcaatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 7471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 13099314 - 13099375
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggat 217  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  13099314 aattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggat 13099375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 38394437 - 38394369
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  38394437 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 38394369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 25542970 - 25542911
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  25542970 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 25542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 11759576 - 11759510
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  11759576 ttgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 11759510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 31434896 - 31434959
Alignment:
Q  163 gcgaattcgttga-aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  31434896 gcgaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagc 31434959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 7092070 - 7092119
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  7092070 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 7092119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 7094298 - 7094366
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||||| ||| |||| ||| ||||||    
T  7094298 aattgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaaggcatagtcaagc 7094366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 20297813 - 20297745
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  20297813 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 20297745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 21678509 - 21678440
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||| |||||||||||||| ||| ||| |||| ||||||||||    
T  21678509 aattgttgtgaattcgatgaaaaatcacaccgataacaaacttgatttgtggagcaaggaataatcaagc 21678440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 28486016 - 28485948
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||    
T  28486016 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttgatatgtggagcaagggataatcaagc 28485948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 44725025 - 44724956
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||  ||| ||||||||||||||||||||||||| ||| |||||||| ||||||    
T  44725025 aattgttgcgaattcgatgggaaaacacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 44724956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 1606821 - 1606762
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  1606821 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 1606762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 24749038 - 24748970
Alignment:
Q  156 aattgtagcgaattcgttga-aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    |||||| | ||||||| ||| |||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  24749038 aattgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaagggataatcaa 24748970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 45008 - 44947
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||| |||||||||||||||| |||||||||||| ||| || ||||||||||||    
T  45008 gcgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaatggataatcaagc 44947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 7349134 - 7349183
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  7349134 aaaaatcacaccaataacaa-cttgatgtgtggagtaagggataattaagc 7349183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 7351508 - 7351557
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  7351508 aaaaatcacaccaataacaa-cttgatgtgtggagtaagggataattaagc 7351557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 20626477 - 20626416
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| ||| ||| |||||||||||    
T  20626477 gcgaattcgatgaaaaatcacaccaataac-aacctgatgtgtggagcaagagataatcaagc 20626416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 20630368 - 20630307
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| ||| ||| |||||||||||    
T  20630368 gcgaattcgatgaaaaatcacaccaataac-aacctgatgtgtggagcaagagataatcaagc 20630307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 20642787 - 20642726
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| ||| ||| |||||||||||    
T  20642787 gcgaattcgatgaaaaatcacaccaataac-aacctgatgtgtggagcaagagataatcaagc 20642726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 22251452 - 22251494
Alignment:
Q  181 cacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  22251452 cacaccaataacaaacttgatgtgttgagcaagggataatcaa 22251494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 26804959 - 26804889
Alignment:
Q  155 aaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||| | ||| ||||||||||||||||||| ||||||||| ||| || ||||| ||||||    
T  26804959 aaattgttgcgaatttgatgagaaatcacaccaataacaaatttgatgtgtggagcaaaggatagtcaagc 26804889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 27306080 - 27306142
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||| | ||||||||||||||||||||||||||| ||  |||||||| ||||||    
T  27306080 gcgaattcgatgagagatcacaccaataacaaacttgatgtgtggaacaagggatagtcaagc 27306142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 40836582 - 40836647
Alignment:
Q  158 ttgtagcgaattcgtt-gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    |||| ||||||||| | ||||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  40836582 ttgttgcgaattcgatcgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaa 40836647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 42330850 - 42330912
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||| ||| || ||||||||||||    
T  42330850 gcgaattcgatgagaaatcacgccaataataaacttgatgtgtggagcaatggataatcaagc 42330912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 39145856 - 39145897
Alignment:
Q  184 accaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  39145856 accaataacaaacttgatgtgtggagtaagtgataatcaagc 39145897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 40550280 - 40550212
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  40550280 aattgttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 40550212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 36059 - 36012
Alignment:
Q  177 aaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  36059 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 36012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 1850411 - 1850364
Alignment:
Q  177 aaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  1850411 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 1850364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 20299894 - 20299843
Alignment:
Q  173 tgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  20299894 tgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 20299843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 31153690 - 31153741
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagt 210  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  31153690 ttgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagt 31153741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 444027 - 443976
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| |||||||||||||||||||||||||| ||| |||| ||| ||||||    
T  444027 gaaaactcacaccaataacaaacttgatgtgtggagcaaggaatagtcaagc 443976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 7469863 - 7469928
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||||||||||||||||| || ||||||||| |||  ||||||||||||||    
T  7469863 ttgttgcgaattcgatgaaaaatcacaccaataac-aatttgatgtgtggag-cagggataatcaagc 7469928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 37411982 - 37412033
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| |||||||||||||||||||||||||| ||  |||| ||||||||||    
T  37411982 gaaaactcacaccaataacaaacttgatgtgtggaacaaggaataatcaagc 37412033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 1046774 - 1046823
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  1046774 aaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 1046823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 1049126 - 1049195
Alignment:
Q  156 aattgtagcgaattcgttgaaaaat-cacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| |||||||||  ||||||| |||||||||||||| |||||||||| ||| ||| |||||||||||    
T  1049126 aattgttgcgaattcgaagaaaaattcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 1049195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 9679495 - 9679441
Alignment:
Q  168 ttcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||| ||| ||| ||||||||||||||||||||||||| ||| ||| ||||||||    
T  9679495 ttcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgataatca 9679441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 38397082 - 38397022
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  38397082 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataataaagc 38397022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 48458096 - 48458036
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  48458096 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 48458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 1502832 - 1502880
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  1502832 aaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 1502880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 22137521 - 22137462
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||| ||| |||||| ||||    
T  22137521 gaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataattaagc 22137462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 24465969 - 24465929
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||| ||||||||||||||||||| ||| |||||||||    
T  24465969 gaattcgatgaaaaatcacaccaataataaatttgatgtgt 24465929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 25357371 - 25357331
Alignment:
Q  166 aattcgttga-aaaatcacaccaataacaaacttgatgtgt 205  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  25357371 aattcgttgagaaaaccacaccaataacaaacttgatgtgt 25357331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 27832494 - 27832534
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||| |||||||||| ||||||||||||||| ||||||    
T  27832494 gaattcgatgaaaaatcataccaataacaaacttaatgtgt 27832534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 40552548 - 40552489
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||| ||| |||||| ||||    
T  40552548 gaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataattaagc 40552489  T

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Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 27105208 - 27105146
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  27105208 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 27105146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 11739418 - 11739486
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  11739418 aattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtagagcaagggatagtcaag 11739486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 17849511 - 17849461
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  17849511 aaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 17849461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 19008034 - 19007984
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  19008034 aaaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagc 19007984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 21520531 - 21520597
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| ||||||||| ||| ||| ||||||||||||||||||||||||| ||| ||| ||||||||    
T  21520531 aattgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgataatca 21520597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 36560978 - 36561046
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||||||| ||| |||| ||||||||||    
T  36560978 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaaggaataatcaagc 36561046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 22287187 - 22287247
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| ||| |||||||| ||||||    
T  22287187 gaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 22287247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 22874513 - 22874453
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||| ||| |||| ||||||    
T  22874513 gaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagtgatagtcaagc 22874453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 36558727 - 36558786
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||| || |||||||||| ||| |||||||||||||||    
T  36558727 gaattcgatgaaaaatcacaccaataataa-cttgatgtgtggagcaagggataatcaagc 36558786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 42923357 - 42923417
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||  ||| ||||||||||||||||||||||||| ||| ||| |||||||||||    
T  42923357 gaattcgttgtgaaaacacaccaataacaaacttgatgtgtggagcaagagataatcaagc 42923417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19501842 - 19501907
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  19501842 ttgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 19501907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 37962797 - 37962852
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataat 220  Q
    ||||||| |||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  37962797 gaattcgatgaaaaatcacatcaataataaacttgatgtgtggagtaagtgataat 37962852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 43623427 - 43623486
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||| ||  ||||||||    
T  43623427 gcgaattcgatgaaaaatcacaccaataactaacttgatgtgtggagcaatagataatca 43623486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 45238841 - 45238888
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  45238841 ttgttgcgaattcgatgaaaaatcacaccaataataaacttgatgtgt 45238888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 5375218 - 5375256
Alignment:
Q  187 aataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5375218 aataacaaacttgatgtgtggagtaagggataatcaagc 5375256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 13909902 - 13909951
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  13909902 aaaagtcacaccaataacaa-cttgatgtgtggagtaagggataatcaagc 13909951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 28197036 - 28196986
Alignment:
Q  168 ttcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  28197036 ttcgatgaaaaatcacaccaataacaaatttgatgtgtggagcaagggata 28196986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 45279846 - 45279907
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||| |||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  45279846 gcgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 45279907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 19504194 - 19504242
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  19504194 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 19504242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 20146456 - 20146505
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    |||||| | ||||||||||||||||||||||||||| | |||||||||||    
T  20146456 aattgttgtgaattcgttgaaaaatcacaccaataaaatacttgatgtgt 20146505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22707593 - 22707662
Alignment:
Q  157 attgtagcgaattcgttga-aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||||| ||| |||| ||||||||||||||| ||||||||| |||||||| | ||||||||    
T  22707593 attgttgcgaattcgatgagaaaaccacaccaataacaaatttgatgtgtggagtaaggaacaatcaagc 22707662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 23452094 - 23452142
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  23452094 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 23452142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 3022576 - 3022516
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| | ||||||| ||||||||||||||||||| ||| ||| |||||||||||    
T  3022576 gaattcggtgagagatcacacaaataacaaacttgatgtgtggagcaagtgataatcaagc 3022516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 34979456 - 34979500
Alignment:
Q  181 cacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||    
T  34979456 cacaccaataacaaacttgatgtgtggagtaaggaataataaagc 34979500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 45332026 - 45332085
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||  |||||||||| ||||    
T  45332026 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggaacaagggataattaagc 45332085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 7462793 - 7462856
Alignment:
Q  163 gcgaattcgttga-aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||| |||| |||| | |||||||||||||||||| ||| || ||||||||||||    
T  7462793 gcgaattcgttgagaaaaccacatcgataacaaacttgatgtgtggagcaaaggataatcaagc 7462856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 22162864 - 22162935
Alignment:
Q  154 caaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||| ||||||||| ||| ||| ||||||||||||||  |||||||||  || |||||||||||||||    
T  22162864 caaactgttgcgaattcgatgagaaaacacaccaataacaattttgatgtgtgaagcaagggataatcaagc 22162935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 35215449 - 35215498
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  35215449 aaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 35215498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 6258668 - 6258725
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||| ||| || |||||||||||||||||||||| ||| ||| ||||||||    
T  6258668 gaattcgatgagaaaacataccaataacaaacttgatgtgtggagcaagtgataatca 6258725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 14837673 - 14837612
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaa-acttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| |||||||| ||||||||| ||||||||||| ||| ||| |||||||||||    
T  14837673 gaattcgatgagaaatcacatcaataacaatacttgatgtgtggagcaagtgataatcaagc 14837612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 28459054 - 28459103
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||| | ||||||||||| ||| ||| |||||||||||    
T  28459054 aaaatcacaccaataaaacacttgatgtgtggagcaagtgataatcaagc 28459103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 38020473 - 38020424
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| ||||||| | ||| |||| ||||||||||    
T  38020473 aaaatcacaccaataacaaatttgatgtatggagcaaggaataatcaagc 38020424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 42453874 - 42453826
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  42453874 aaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 42453826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 42923299 - 42923339
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||||||  ||| |||||||||||||||||||||||||    
T  42923299 gaattcgttgtgaaaacacaccaataacaaacttgatgtgt 42923339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 36402168 - 36402233
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36402168 attgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatca 36402233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 27912969 - 27912909
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  27912969 gaattcgatgaaaaatcccaccaataacaaacttgatgtgtggagtaagggataatcaagc 27912909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 34530565 - 34530625
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  34530565 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtcgagcaagtgataatcaagc 34530625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 18467126 - 18467057
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  18467126 aattgttgtgaattcgatgaaaaatcacactaataacaaacttgatgtgtggagcaagggataatcaagc 18467057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 18469442 - 18469382
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  18469442 gaattcgatgaaaaatcataccaataacaaacttgatgtgtggagcaagggataatcaagc 18469382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 27910875 - 27910808
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    |||||| | ||||||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  27910875 aattgttgtgaattcgatgaaaaatcacaccaataacaaatttgatgtgtggagcaagggataatcaa 27910808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 21948464 - 21948402
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  21948464 gcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggataatcaagc 21948402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 38959976 - 38960037
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  38959976 gcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 38960037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 16776588 - 16776531
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  16776588 gaattcattgaaaaatcacaccaataacaaacttgatgtgtggagcaaggaataatca 16776531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 18511053 - 18511122
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||| |||||||| |||||||||||||||||||| ||| |||||||| ||||||    
T  18511053 aattgttgcgaattcgatgataaatcacatcaataacaaacttgatgtgtggagcaagggatagtcaagc 18511122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 21289187 - 21289127
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||| |||||||| ||||||    
T  21289187 gaattcgatgaaaaatcacaccaatatcaaacttgatgtgtggagcaagggatagtcaagc 21289127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 39798470 - 39798403
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||||| ||| |||||||||||||||    
T  39798470 attgttgcgaattcgatgaaaaatcacaccaataac-aatttgatgtgtggagcaagggataatcaagc 39798403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 41585586 - 41585646
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||| | | ||| |||||||||||    
T  41585586 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggggcaagagataatcaagc 41585646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4410459 - 4410394
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  4410459 ttgttgcgaattcgttgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 4410394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 2724311 - 2724261
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||    
T  2724311 aaaaatcacaccaataacaaacttgatgtgtatagcaagggataatcaagc 2724261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 6745510 - 6745441
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||| ||| ||||||||||||||||||||||||| ||| ||| |||| ||||||    
T  6745510 aattgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagagatagtcaagc 6745441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 24127285 - 24127228
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||||||||||||| |||||||||||| |||||| ||| ||||||||||||    
T  24127285 gaattcgatgaaaaatcacacaaataacaaacttaatgtgtggagcaagggataatca 24127228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 3372983 - 3373042
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  3372983 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 3373042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 6747745 - 6747677
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||| | ||| ||| ||||||||||||||||||||||||| ||| ||| |||||||||||    
T  6747745 attgttgcgaattggatgagaaaacacaccaataacaaacttgatgtgtagagcaagagataatcaagc 6747677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 18597072 - 18597016
Alignment:
Q  166 aattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| ||||||||||||||||||||||||||||||| | ||| ||| ||||||||    
T  18597072 aattcgatgaaaaatcacaccaataacaaacttgatgtatggagcaagtgataatca 18597016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 34476892 - 34476958
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  34476892 attgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 34476958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 36209001 - 36208941
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||| |||||| ||||||||||||| ||| ||| |||||||||||    
T  36209001 gaattcgatgaaaaatcacatcaataataaacttgatgtgtagagcaagtgataatcaagc 36208941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 40221949 - 40221897
Alignment:
Q  173 tgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||| ||||||    
T  40221949 tgaaaaatcacaccaataacaaacttgatgtgtggagcaaaggatagtcaagc 40221897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 39854917 - 39854862
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||| ||| ||||||||    
T  39854917 gcgaattcgatgaaaaatcacaccaataataaacttgatatgtggagcaagggata 39854862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 21684298 - 21684358
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  21684298 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 21684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 31472455 - 31472525
Alignment:
Q  156 aattgtagcgaattcgttgaaaaat-cacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| |||||||| |||||| ||||||||||||||||||  |||||| |||| ||||||    
T  31472455 aattgttgcgaattcgatgaaaaatacacaccgataacaaacttgatgtgtgaagtaagagatactcaagc 31472525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 2954843 - 2954786
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||| ||| ||||||||||||||| ||||||||| ||||||| ||||||||    
T  2954843 gaattcgatgagaaaacacaccaataacaaatttgatgtgtggagtaagtgataatca 2954786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 10587236 - 10587188
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  10587236 aaaatcacaccaataacaaacttgatgtgtggagcaa-ggataatcaagc 10587188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 15356687 - 15356755
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  15356687 aattgttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 15356755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 17818352 - 17818401
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||||||||||||||||||| ||| |||| ||||||||||    
T  17818352 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataatcaagc 17818401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 23665487 - 23665419
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  23665487 aattgttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 23665419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 23793100 - 23793168
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  23793100 aattgttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 23793168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 34479275 - 34479323
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  34479275 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 34479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 15354420 - 15354479
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  15354420 gaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 15354479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 23741703 - 23741762
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  23741703 gaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 23741762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 25921321 - 25921379
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||| || ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  25921321 gaattcgttgagaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 25921379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 26098126 - 26098197
Alignment:
Q  156 aattgtagcgaattcgttgaaaaa--tcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||| |||  ||||||||||| |||||||||||||| ||| |||| ||||||||||    
T  26098126 aattgttgcgaattcgatgagaaaactcacaccaatatcaaacttgatgtgtggagcaaggaataatcaagc 26098197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 31179219 - 31179278
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||| | ||| |||||||||| ||||    
T  31179219 gaattcgatgaaaaatcacaccaataac-aacttgatgtatggagcaagggataattaagc 31179278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 658208 - 658266
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||| |||||| |||||||||||||||| ||||||||| ||| |||| |||||||    
T  658208 gcgaattcgatgaaaa-tcacaccaataacaaatttgatgtgtggagcaaggaataatca 658266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 2818186 - 2818240
Alignment:
Q  167 attcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||| ||||||| ||||||||||||||||||||||| | ||| ||||||||||||    
T  2818186 attcgatgaaaaa-cacaccaataacaaacttgatgtatggagcaagggataatca 2818240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 12555773 - 12555824
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| |||||||||||||||| ||||||||| ||| |||| ||||||||||    
T  12555773 gaaaactcacaccaataacaaatttgatgtgtggagcaaggaataatcaagc 12555824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 31465832 - 31465879
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    |||| ||||||| | ||||||||||||||||||||||| |||||||||    
T  31465832 ttgttgcgaatttgatgaaaaatcacaccaataacaaatttgatgtgt 31465879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 31545502 - 31545456
Alignment:
Q  178 aatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  31545502 aatcacaccaataacaa-cttgatgtgtggagtaagggttaatcaagc 31545456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 2175323 - 2175274
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  2175323 aaaagtcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 2175274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 15552668 - 15552619
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  15552668 aaaaatcacaccaataacaa-cttgatgcgtgaagtaagggataatcaagc 15552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 25804466 - 25804397
Alignment:
Q  156 aattgtagcgaattcgttgaaaa-atcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||| ||||| |||||| |||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  25804466 aattgttgcgtattcgatgaaaatatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 25804397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 38882521 - 38882461
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  38882521 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 38882461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 1189460 - 1189518
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||  |||||||||| |||||||||||||| ||| |||| ||||||||||    
T  1189460 gaattcgatgaaaa--cacaccaatatcaaacttgatgtgtggagcaaggaataatcaagc 1189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 10474176 - 10474233
Alignment:
Q  167 attcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    ||||| |||||||| ||| |||||| ||||||||||||| ||| |||| |||||||||    
T  10474176 attcgatgaaaaattacatcaataataaacttgatgtgtggagcaaggaataatcaag 10474233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 10750121 - 10750073
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  10750121 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagc 10750073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 10757597 - 10757549
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  10757597 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagc 10757549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 15143900 - 15143843
Alignment:
Q  155 aaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaa 212  Q
    ||||||| | |||||||||||||||||| |||||||| | | ||||||||| ||||||    
T  15143900 aaattgttgtgaattcgttgaaaaatcataccaataaaataattgatgtgtggagtaa 15143843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 37705644 - 37705693
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||||||||||||||||||| ||| |||| |||| |||||    
T  37705644 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataaccaagc 37705693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 696292 - 696244
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    ||||||| |||||||||| ||||||||||| ||| ||| ||||||||||    
T  696292 aaaatcataccaataacagacttgatgtgtggagcaagagataatcaag 696244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 4237059 - 4237001
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||| ||||||||||||| ||||||||||||  || ||| |||||||||||    
T  4237059 gaattcgttgaaaa-tcacaccaataac-aacttgatgtgtgaagcaagagataatcaagc 4237001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 6756923 - 6756863
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataac-aaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||| ||| ||| |||||||||||| ||||||||||||| ||| ||| ||||||||    
T  6756923 gcgaattcgatgagaaaacacaccaataacaaaacttgatgtgtggagcaagtgataatca 6756863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 18099007 - 18099076
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  18099007 aattgttgggaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 18099076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 15781287 - 15781227
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| || |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  15781287 gaattcgatggaaaaacacaccaataacaaacttgatgtgtggagtaagggataatcaagc 15781227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 36012239 - 36012179
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  36012239 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtatggagcaagggataatcaa 36012179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 18096744 - 18096803
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  18096744 gcgaattcgatgaaaaattacaccaataacaaacttgatgtgtggagcaagggataatca 18096803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 42990720 - 42990655
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  42990720 aattgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggataatca 42990655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 53915342 - 53915404
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||| ||||||    
T  53915342 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtatggagcaagggatagtcaagc 53915404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 3315103 - 3315034
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||| ||| ||||||||||| ||||||||||||| ||| |||||||||||||||    
T  3315103 aattgttgcgaattcgatgagaaaacacaccaataataaacttgatgtgtggagcaagggataatcaagc 3315034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 6065630 - 6065698
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  6065630 aattgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 6065698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 18163074 - 18163017
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  18163074 gaattcgatgaaaaatcacaccaataataaatttgatgtgtggagtaagggataatca 18163017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 28101845 - 28101914
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||| |||||||||| ||||||||||||| ||| |||||||||||||||    
T  28101845 aattgttgtgaattcgatgaaaaattacaccaataataaacttgatgtgtggagcaagggataatcaagc 28101914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 43423305 - 43423374
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| |||||||| |||||||||||||| ||||||||| ||| |||||||| ||||||    
T  43423305 aattgttgcgaattcgatgaaaaattacaccaataacaaagttgatgtgtggagcaagggatagtcaagc 43423374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 53917503 - 53917572
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||    
T  53917503 aattgttgcgaaatcgatgaaaaatcacactaataacaaacttgatgtgtggagcaagggatagtcaagc 53917572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 747171 - 747112
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  747171 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 747112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 1321898 - 1321835
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  1321898 ttgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggataatca 1321835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 45883350 - 45883298
Alignment:
Q  166 aattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  45883350 aattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 45883298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 880088 - 880151
Alignment:
Q  163 gcgaattcgttgaaaaa-tcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||    
T  880088 gcgaattcgatgaaaaagtcacaccaataataaacttgatgtgtggagtaaggaataatcaagc 880151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 1313818 - 1313755
Alignment:
Q  163 gcgaattcgttgaaaaa-tcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||    
T  1313818 gcgaattcgatgaaaaactcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 1313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 32219486 - 32219436
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  32219486 aaaaatcacacaaataacaaacttgatgtgtggagcaagggataatcaagc 32219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 9604451 - 9604511
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||| |||| |||||||||    
T  9604451 gcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaaggaataatcaag 9604511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 10621363 - 10621431
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  10621363 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 10621431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 11168522 - 11168455
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  11168522 aattgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 11168455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 24980120 - 24980063
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  24980120 gaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggataatca 24980063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 27635515 - 27635564
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  27635515 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagc 27635564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 43226498 - 43226430
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||| |||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  43226498 aattgttgcgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 43226430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 47701524 - 47701565
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtg 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  47701524 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtg 47701565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 43421258 - 43421306
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  43421258 attgttgcgaattcgatgaaaaatcacaccaataacaaagttgatgtgt 43421306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 5926615 - 5926674
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    ||||||| |||||| ||||||||||||||||||| ||||||  ||||||| |||||||||    
T  5926615 gaattcgatgaaaactcacaccaataacaaacttcatgtgtgaagtaaggaataatcaag 5926674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 28412876 - 28412934
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    ||||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||||    
T  28412876 gaattcgatgaaaaaacacaccaataacaa-cttgatgtgtggagcaagggataatcaag 28412934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 41849475 - 41849406
Alignment:
Q  154 caaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  41849475 caaaatgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 41849406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 5192064 - 5192004
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  5192064 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 5192004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 5522470 - 5522530
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||| ||||||    
T  5522470 gcgaattcgttgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggatagtcaagc 5522530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 25533845 - 25533784
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||||| ||| ||| ||||    
T  25533845 aattgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 25533784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 28761293 - 28761351
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||| ||||||||||||||||||| || |||||||||| ||| ||| |||||||||    
T  28761293 gaattcgatgaaaaatcacaccaataataatcttgatgtgtggagcaagtgataatcaa 28761351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 38210783 - 38210726
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| ||||||| |||||    
T  38210783 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggattatcaa 38210726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 42992783 - 42992737
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  42992783 aaaatcacactaataacaaacttgatgtgtagagcaagggataatca 42992737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 456309 - 456261
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  456309 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 456261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 458686 - 458638
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  458686 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 458638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 1626543 - 1626592
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||||||||||||||||||| ||| |||| ||||||||||    
T  1626543 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataatcaagc 1626592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 10084245 - 10084293
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  10084245 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 10084293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 10191168 - 10191216
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  10191168 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 10191216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 10955883 - 10955931
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  10955883 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 10955931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 51674626 - 51674675
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||||||||||| | ||| |||| ||||||||||    
T  51674626 aaaatcacaccaataacaaacttgatgtatggagcaaggaataatcaagc 51674675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 53893910 - 53893958
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  53893910 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 53893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 6063281 - 6063348
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||||| |||||||||||||| ||||| |||||||||||| ||  |||||||||| ||||    
T  6063281 attgttgcgaattcgatgaaaaatcacaccgataac-aacttgatgtgtggaacaagggataattaagc 6063348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 38890441 - 38890394
Alignment:
Q  177 aaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  38890441 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 38890394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 50494411 - 50494352
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| ||| |||||| ||||    
T  50494411 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataattaagc 50494352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 5886601 - 5886551
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||||| ||| ||||||||| |||||    
T  5886601 gaaaaatcacaccaataac-aacttgatgtgtggagcaagggataaacaagc 5886551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 5900074 - 5900024
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||||| ||| ||||||||| |||||    
T  5900074 gaaaaatcacaccaataac-aacttgatgtgtggagcaagggataaacaagc 5900024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 11170789 - 11170724
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||| |||||  |||||||| |||||||||| |||||||||||||||||||    
T  11170789 ttgttgcgaattcgatgaaaa-tcacattaataacaa-cttgatgtgtggagtaagggataatcaagc 11170724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 28181401 - 28181362
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagg 214  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  28181401 aaaaatcacaccaataacaaacttgatgtgtggagcaagg 28181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 880312 - 880362
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||| |||||||||||||||||| ||| ||||  |||||||||    
T  880312 aaaaatcacacccataacaaacttgatgtgtggagcaaggattaatcaagc 880362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 22114147 - 22114207
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||| ||| |||||||||| ||| |||||||||||||||    
T  22114147 gcgaattcgatgaaaa-tcacaccaatagcaa-cttgatgtgtggagcaagggataatcaagc 22114207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 25389309 - 25389260
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||| ||||||||||| |||||||||| ||| |||||||||||||||    
T  25389309 aaaaatcataccaataacaa-cttgatgtgtggagcaagggataatcaagc 25389260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 561640 - 561689
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||| | ||||||||||| |||||||  ||||||||||    
T  561640 aaaatcacaccaataaaatacttgatgtgtggagtaagtaataatcaagc 561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 10958179 - 10958227
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  10958179 aaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 10958227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 29897533 - 29897574
Alignment:
Q  165 gaattcgttga-aaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  29897533 gaattcgttgagaaaaccacaccaataacaaacttgatgtgt 29897574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 32263887 - 32263944
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||||  |||||||||||| ||||||||| ||||||||| ||| ||| ||||||||    
T  32263887 gaattcgaagaaaaatcacactaataacaaatttgatgtgtggagcaagtgataatca 32263944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 43228696 - 43228640
Alignment:
Q  168 ttcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||| |||||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  43228696 ttcgatgagaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 43228640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 4666913 - 4666865
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||||||||||||||| ||| ||||||||| ||||||| ||| ||||    
T  4666913 gaaaaatcacaccaataataaatttgatgtgtggagtaagtgattatca 4666865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 17795663 - 17795623
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||| ||||||||||||||||||| ||| |||||||||    
T  17795663 gaattcgatgaaaaatcacaccaataataaatttgatgtgt 17795623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 19104103 - 19104063
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||| ||||||||||||||||||| ||| |||||||||    
T  19104103 gaattcgatgaaaaatcacaccaataataaatttgatgtgt 19104063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 25688015 - 25688063
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||| ||||||||||||||||||| |||||| ||| ||| ||||||||    
T  25688015 gaaaactcacaccaataacaaactttatgtgtggagcaagtgataatca 25688063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 31151748 - 31151689
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||| | ||||||||||| ||| |||  ||||||||||    
T  31151748 gaattcgatgaaaaatcacaccaataa-atacttgatgtgtggagcaagtaataatcaagc 31151689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 47148759 - 47148791
Alignment:
Q  173 tgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    |||||| ||||||||||||||||||||||||||    
T  47148759 tgaaaactcacaccaataacaaacttgatgtgt 47148791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 33541261 - 33541321
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33541261 gaattcgatcaaaaatcacaccaataacaaacttgatgtgtggagtaagggataatcaagc 33541321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 15073198 - 15073136
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  15073198 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 15073136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 15185570 - 15185630
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  15185570 gaattcggtgaaaaatcacatcaataacaaacttgatgtgtggagtaagggatagtcaagc 15185630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 28283060 - 28283127
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  28283060 attgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 28283127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 14477734 - 14477677
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  14477734 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataatca 14477677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 15068475 - 15068406
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||||| ||  |||||||| ||||||    
T  15068475 aattgttgcgaattcgatgaaaaatcacaccaacaacaaacttgatgtgtggaacaagggatagtcaagc 15068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 18811205 - 18811137
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  18811205 aattgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 18811137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 27827482 - 27827414
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||||| ||| |||||||| ||||||    
T  27827482 aattgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 27827414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 41383157 - 41383088
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| |||| |||| ||||||| ||||||||||||||||||||||||| ||| ||| |||||||||||    
T  41383157 aattgttgcgagttcgatgaaaaaccacaccaataacaaacttgatgtgtggagcaagagataatcaagc 41383088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 35872307 - 35872367
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| ||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  35872307 gaattcgatgagaaaacacaccaataacaaacttgatgtgtgaagtaagggataatcaagc 35872367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 13858341 - 13858400
Alignment:
Q  166 aattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||| ||| |||||||||||    
T  13858341 aattcgatgaaaaatcacaccaataagaaacttgatgtgtggagcaagtgataatcaagc 13858400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 14808235 - 14808185
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  14808235 aaaaatcacaccaataacaaacttgatgtgtggagcaacggataatcaagc 14808185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 15956437 - 15956379
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||| |||||||| ||||    
T  15956437 gaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagggatagtcaa 15956379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 27829786 - 27829725
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| |||||||||||||||||||||||||| ||| |||||||| ||||||    
T  27829786 gcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 27829725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 3874481 - 3874422
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||| |||||    
T  3874481 gaattcgttgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataaccaagc 3874422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 21482792 - 21482732
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||| ||| |||||| ||||    
T  21482792 gaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagtgataatgaagc 21482732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 24873045 - 24873104
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  24873045 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 24873104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 25953004 - 25952944
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| ||| ||| |||||||||||    
T  25953004 gaattcgatgagaaaacacaccaataacaaacttgatgtgtggagaaagtgataatcaagc 25952944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 21480993 - 21480926
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    |||||| | ||||||| |||||||| |||||||||| ||||||||||||| ||||||| || ||||||    
T  21480993 aattgttgtgaattcgatgaaaaataacaccaataataaacttgatgtgtggagtaagtgacaatcaa 21480926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 27106754 - 27106813
Alignment:
Q  166 aattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||| ||| ||||||||||||||||||||||||| ||| |||||||| ||||||    
T  27106754 aattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 27106813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 27911561 - 27911506
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataat 220  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||| ||| ||||||    
T  27911561 gaatttgttgaaaaatcacaccaataaaaaacttgatgtgtggagcaagtgataat 27911506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 27957980 - 27957925
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataat 220  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||| ||| ||||||    
T  27957980 gaatttgttgaaaaatcacaccaataaaaaacttgatgtgtggagcaagtgataat 27957925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 43530610 - 43530544
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||  |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  43530610 ttgttgcgaattcaatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 43530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 44721318 - 44721272
Alignment:
Q  178 aatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  44721318 aatcacaccaataacaa-cttgatgtgtggagtaagggataatcaagc 44721272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 183304 - 183246
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  183304 gaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggatagtcaa 183246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 3883440 - 3883501
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||| ||||||| |||||||||||| ||| || ||||||||||||    
T  3883440 gcgaattcgatgaaaaatcacatcaataac-aacttgatgtgtggagcaaaggataatcaagc 3883501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 15809707 - 15809647
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  15809707 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 15809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 18813372 - 18813311
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| |||||||| ||| ||| ||| |||||||||||    
T  18813372 gcgaattcgatgaaaaatcacaccaataac-aacttgatatgtagagcaagagataatcaagc 18813311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 30480365 - 30480414
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| |||||||||||||| ||||||||| |||||||| ||||||||||    
T  30480365 aaaatgacaccaataacaaatttgatgtgtggagtaaggaataatcaagc 30480414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 22684489 - 22684555
Alignment:
Q  157 attgtagcgaattcgttg--aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||| ||||||||| ||  |||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  22684489 attgttgcgaattcgatggaaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatca 22684555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 32339804 - 32339739
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||||| | | |||||||||||||||    
T  32339804 ttgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggggcaagggataatcaagc 32339739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 2467975 - 2468044
Alignment:
Q  155 aaattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| | ||||||| |||||| |||||||||||| ||||||||||||| ||| ||| |||| ||||||    
T  2467975 aaattgttgtgaattcgatgaaaa-tcacaccaataataaacttgatgtgtggagcaagtgatagtcaagc 2468044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 5372042 - 5372092
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||| |||||||||||||||||||| ||| || ||||| ||||||    
T  5372042 aaaaatcacatcaataacaaacttgatgtgtggagcaatggatattcaagc 5372092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 14419032 - 14419098
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| | ||||||| ||| ||| ||||||||||||||||||||||| | ||| ||| ||||||||    
T  14419032 aattgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtatggagcaagtgataatca 14419098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 43082451 - 43082402
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  43082451 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagc 43082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 4424496 - 4424448
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||| ||||| ||| |||||||||||||||    
T  4424496 aaaatcacaccaataacaa-cttggtgtgtggagcaagggataatcaagc 4424448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 36866012 - 36865963
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| |||| |||||||||||||||||||| ||| ||| |||||||||||    
T  36866012 aaaaccacatcaataacaaacttgatgtgtggagcaagtgataatcaagc 36865963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 16834018 - 16833978
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    |||||||||||||| |||||||||||| | |||||||||||    
T  16834018 gaattcgttgaaaagtcacaccaataaaatacttgatgtgt 16833978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 17847996 - 17847956
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgt 205  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  17847996 gaattcgttaaaaaatcacaccaataaaatacttgatgtgt 17847956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 37214131 - 37214175
Alignment:
Q  181 cacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||||| | ||||||| ||||| |||||    
T  37214131 cacaccaataacaaacttgatgtatggagtaagagataagcaagc 37214175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 2949085 - 2949145
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  2949085 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 2949145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 39932508 - 39932448
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  39932508 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagc 39932448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 6995539 - 6995606
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  6995539 ttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 6995606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 39462952 - 39462893
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  39462952 gcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatca 39462893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 18840023 - 18839957
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  18840023 ttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaag 18839957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 24326095 - 24326036
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  24326095 gaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagtaagggataatcaagc 24326036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 25251127 - 25251187
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  25251127 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 25251187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 50248423 - 50248483
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  50248423 gaattcgatgataaatcacaccaataacaaatttgatgtgtggagtaagggataatcaagc 50248483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 16429390 - 16429324
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  16429390 aattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataatca 16429324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 50078632 - 50078702
Alignment:
Q  156 aattgtagcgaattcgttga-aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  50078632 aattgttgcgaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagc 50078702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 16226610 - 16226542
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  16226610 aattgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 16226542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 17324484 - 17324545
Alignment:
Q  165 gaattcgttgaaaaa-tcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||    
T  17324484 gaattcgatgaaaaactcacaccaataacaaacttgatgtgtggagtaagggatagtcaagc 17324545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 31424859 - 31424928
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||| ||| |||| ||| ||||||    
T  31424859 aattgttgcgaattcaatgaaaaatcacaccaataacaaacttgatgtgtggagcaaggaatactcaagc 31424928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 9459283 - 9459342
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  9459283 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 9459342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 9463110 - 9463169
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  9463110 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 9463169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 15823977 - 15823921
Alignment:
Q  166 aattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  15823977 aattcctttaaaaatcacaccaataacaaacttgatgtgtggagtaaggggtaatca 15823921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 25248404 - 25248464
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||||||| ||| ||||||    
T  25248404 gaattcgatgaaaaatcacaacaataacaaacttgatgtgtggagtaaggaatagtcaagc 25248464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 31422710 - 31422770
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||||| |||||||||||| |||||||||||||||||||| ||| |||| ||||||||    
T  31422710 gcgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaaggaataatcaa 31422770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 31490346 - 31490280
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||||| ||| ||| |||||||||||    
T  31490346 ttgttgcgaattcgatgaaaaatcacaccaat-acaaacttgatgtgtggagcaagagataatcaagc 31490280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 11457327 - 11457385
Alignment:
Q  164 cgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||||| |||||||||||||||||||||||||||||||||  || ||| ||||||||    
T  11457327 cgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgaagcaagtgataatca 11457385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 17319315 - 17319257
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||| ||||||||| ||||||||||||| ||||||||| |||||||| ||||||||    
T  17319315 gaattcgatgaaaaatcgcaccaataacaaatttgatgtgtggagtaaggaataatcaa 17319257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 23816319 - 23816258
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||| |||| ||||||||||    
T  23816319 gcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaaggaataatcaagc 23816258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 47906700 - 47906639
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  47906700 gcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 47906639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 50307395 - 50307452
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||||||||||||||||||| ||||||||||| | ||| ||||||||||||    
T  50307395 gaattcgatgaaaaatcacaccaataataaacttgatgtctggagcaagggataatca 50307452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 51757976 - 51757908
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||| ||||||||||||| |||||||||| ||| |||||||||||||||    
T  51757976 aattgttgtgaattcgatgaaaaatgacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 51757908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 9240940 - 9241000
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| | |||||||||||||||||||||||||| |||| ||| ||| |||||||||||    
T  9240940 gaattcgataaaaaatcacaccaataacaaacttgaagtgtggagcaagtgataatcaagc 9241000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 16231996 - 16231937
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| || ||||||||||||    
T  16231996 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaacggataatcaagc 16231937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 23786272 - 23786213
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  23786272 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 23786213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 27336799 - 27336847
Alignment:
Q  174 gaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  27336799 gaaaaatcacatcaataacaaacttgatgtgtggagcaagggataatca 27336847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 46431546 - 46431613
Alignment:
Q  157 attgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||||| | ||| ||| |||||||||||    
T  46431546 attgttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtttggagcaagagataatcaagc 46431613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 47452051 - 47451999
Alignment:
Q  173 tgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||| ||||||    
T  47452051 tgaaaaatcacatcaataacaaatttgatgtgtcgagcaagggatagtcaagc 47451999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 4131225 - 4131288
Alignment:
Q  163 gcgaattcgttgaaaaa-tcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||||||| |||||||||||||||||||||||||  ||| ||| |||||||||||    
T  4131225 gcgaattcgatgaaaaactcacaccaataacaaacttgatgtgcggagcaagagataatcaagc 4131288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 13359012 - 13358947
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||| ||||||    
T  13359012 ttgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagtaagggatagtcaagc 13358947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 13762271 - 13762209
Alignment:
Q  163 gcgaattcgttga-aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  13762271 gcgaattcgatgagaaaatcacaccaataacaa-cttgatgtgtggagaaagggataatcaagc 13762209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 14097814 - 14097881
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||||  || ||| |||||||||||    
T  14097814 ttgttgcgaattcgaagaaaaaacacaccaataacaaacttgatgtgtgaagcaagagataatcaagc 14097881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 28842932 - 28842867
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| |||||| |||||| |||||||| |||||||||| |||||||||||||||||||    
T  28842932 ttgttgcgaattcgatgaaaa-tcacactaataacaa-cttgatgtgtggagtaagggataatcaagc 28842867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 30780476 - 30780414
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgat--gtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||| ||||||||||||||||||||||  |||| |||||||| ||||||||||    
T  30780476 gaattcgatgaaaactcacaccaataacaaacttgatgtgtgtggagtaaggaataatcaagc 30780414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 51750477 - 51750412
Alignment:
Q  158 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||| ||||||||| | |||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  51750477 ttgttgcgaattcgat-aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 51750412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 13215512 - 13215454
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| ||| |||||||| ||||    
T  13215512 gaattcgttgagaaaacacaccaataataaacttgatgtgtggagcaagggatagtcaa 13215454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 28206909 - 28206975
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| | ||||||| ||| ||| ||||||||||||||||||||||||| ||| ||| ||||||||    
T  28206909 aattgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgataatca 28206975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 3579437 - 3579493
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||||||| ||||||||||||||||||||||||| ||| ||| ||||||||    
T  3579437 gaattcgatgaaaaa-cacaccaataacaaacttgatgtgtggagcaagtgataatca 3579493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 27338970 - 27339038
Alignment:
Q  156 aattgtagcgaattcgttga--aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| | |||||||||||  ||||||||| |||||||||||||||||||| ||  ||||||||||||    
T  27338970 aattgttgtgaattcgttgagaaaaatcacatcaataacaaacttgatgtgtggaacaagggataatca 27339038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 40134372 - 40134319
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggata 218  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||| ||| ||||    
T  40134372 gaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagtgata 40134319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 47177804 - 47177736
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| | |||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  47177804 aattgttgtgaattcgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 47177736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 20291897 - 20291831
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaag 224  Q
    |||||| ||||||||| |||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||    
T  20291897 aattgttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagagataatcaag 20291831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 47180146 - 47180087
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| | |||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  47180146 gaattcgatcaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 47180087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 10399673 - 10399735
Alignment:
Q  163 gcgaattcgttgaaaa-atcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| |||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  10399673 gcgaattcgatgaaaatatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 10399735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 12302367 - 12302414
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||| ||||||||||||||||||||||||| ||| ||| ||||||||    
T  12302367 aaaaaacacaccaataacaaacttgatgtgtggagcaagtgataatca 12302414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 16432813 - 16432758
Alignment:
Q  167 attcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||| |||  |||||||    
T  16432813 attcgatgaaaaatcacaccaataacaaatttgatgtgtggagcaagtaataatca 16432758  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 13447121 - 13447181
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  13447121 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 13447181  T

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Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 17324484 - 17324442
Alignment:
Q  183 caccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||    
T  17324484 caccaataacaaacttgatgtgtggagcaaggaataatcaagc 17324442  T

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Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 31735369 - 31735430
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| ||| |||| ||||||||||| |||||||||||| ||| ||| |||||||||||    
T  31735369 gcgaattcgatgagaaattacaccaataac-aacttgatgtgtggagcaagagataatcaagc 31735430  T

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Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 2617958 - 2617891
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||||||| ||||||  |||||||||||||| ||||||||||  || |||||||||||||||    
T  2617958 aattgttgcgaattcgatgaaaac-cacaccaataacaa-cttgatgtgtgaagcaagggataatcaagc 2617891  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 15294694 - 15294742
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  15294694 aaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 15294742  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 38925350 - 38925391
Alignment:
Q  181 cacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  38925350 cacaccaataataaacttgatgtgtggagtaagtgataatca 38925391  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 41647349 - 41647292
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    ||||||| ||| ||| ||||||||||||||||||||||||  ||| ||| ||||||||    
T  41647349 gaattcgatgagaaaacacaccaataacaaacttgatgtgcggagcaagtgataatca 41647292  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 17185993 - 17186045
Alignment:
Q  173 tgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| ||||||||| ||| ||| ||| |||| ||||||    
T  17185993 tgaaaaatcacaccaataataaacttgatatgtggagcaagtgatagtcaagc 17186045  T

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Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 25128293 - 25128241
Alignment:
Q  173 tgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| ||||  |||||||||||||||||||| ||| |||| ||||||||||    
T  25128293 tgaaaactcacgtcaataacaaacttgatgtgtagagcaaggaataatcaagc 25128241  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 36035 - 35973
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||| |||||||| ||||||    
T  36035 gcgaattcgatgaaaaattacaccaataacaaacttgatgtgtggagcaagggatagtcaagc 35973  T

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Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 79627 - 79570
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataat 220  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  79627 gcgaattcaatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataat 79570  T

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Target: scaffold0339 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 4431 - 4371
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||  ||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  4431 gaattcgttgtgaaaacacatcaataacaaacttgatgtgtggagtaagggataatcaagc 4371  T

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Target: scaffold0267 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 467 - 408
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  467 gaattcgttgagaaatcacaccaataac-aacttgatgtgtggagcaagggataatcaagc 408  T

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Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 69149 - 69195
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  69149 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatca 69195  T

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Target: scaffold0131 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 15433 - 15392
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtc 206  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  15433 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtc 15392  T

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Target: scaffold0131; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 14247 - 14295
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  14247 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 14295  T

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Target: scaffold0127 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 12712 - 12780
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | ||||||| |||||||| ||||||||||||| |||||||||| ||| |||||||||||||||    
T  12712 aattgttgtgaattcgatgaaaaatgacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 12780  T

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Target: scaffold0472 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 6640 - 6581
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  6640 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 6581  T

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Target: scaffold0045 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 85669 - 85609
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaa 223  Q
    ||||||||| |||||||||||||||||||||| ||| |||||| ||| ||| |||||||||    
T  85669 gcgaattcgatgaaaaatcacaccaataacaatcttaatgtgtggagcaagagataatcaa 85609  T

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Target: scaffold0068 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 29612 - 29552
Alignment:
Q  163 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  29612 gcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 29552  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 80308 - 80242
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatca 222  Q
    |||||| ||||||||| ||| ||| ||||||||||||||||||||||||| ||| |||  |||||||    
T  80308 aattgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtaataatca 80242  T

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Target: scaffold0891 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 4535 - 4583
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  4535 aaaatcacaccaataacaat-ttgatgtgtggagtaagggataatcaagc 4583  T

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Target: scaffold0250 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 3309 - 3261
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  3309 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagc 3261  T

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Target: scaffold0140 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 22567 - 22499
Alignment:
Q  156 aattgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||| | |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  22567 aattgttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 22499  T

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Target: scaffold0140; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 24833 - 24774
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||| ||||    
T  24833 gaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaagc 24774  T

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Target: scaffold1674 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 1298 - 1357
Alignment:
Q  165 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| ||  |||||||||||    
T  1298 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagaaaaagataatcaagc 1357  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 11318 - 11380
Alignment:
Q  163 gcgaattcgttgaaaa-atcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||| |||||| |||||||||||||||| |||||||||| |||||||| ||||| ||||    
T  11318 gcgaattcgatgaaaatatcacaccaataacaa-cttgatgtgtggagtaaggaataattaagc 11380  T

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Target: scaffold0370 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 1309 - 1358
Alignment:
Q  175 aaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    |||||||||||||||||| |||||||||||| ||| ||| |||||||||||    
T  1309 aaaaatcacaccaataac-aacttgatgtgtggagcaagagataatcaagc 1358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 53 - 1
Alignment:
Q  168 ttcgttgaaaaatcacaccaataacaaacttgatgtgtcgagtaagggataatc 221  Q
    |||| |||||||||||||||||||| |||||||||||| ||| ||| |||||||    
T  53 ttcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataatc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 41341 - 41389
Alignment:
Q  176 aaaatcacaccaataacaaacttgatgtgtcgagtaagggataatcaagc 225  Q
    ||||||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  41341 aaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagc 41389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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