View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9833_low_84 (Length: 204)
Name: NF9833_low_84
Description: NF9833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9833_low_84 |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 33990833 - 33990998
Alignment:
| Q |
19 |
tgactgacaatagataaatattactatatcattgtaatttcatctcatcacatacatatagttgctatatgcatttattttaaactgtttaatgaaaatc |
118 |
Q |
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| T |
33990833 |
tgaccgacaatagataaatattactatatcattgtaatttcatctcatcacatacatatagttgcta-atgcatttattttaaactgtttaatgaaaatc |
33990931 |
T |
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| Q |
119 |
aaaattacagattccacaaagttacatagttcaatggtatttattttaaaatactccatgtctaata |
185 |
Q |
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| T |
33990932 |
aaagttacagattccacaaagttacatagttcaatggtatttattttaaaatactcattgtctaata |
33990998 |
T |
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