View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9834_high_3 (Length: 238)
Name: NF9834_high_3
Description: NF9834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9834_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 34262215 - 34261994
Alignment:
| Q |
1 |
cttaatttcgagtaaataaactttatataccattcaactgaatttcatattacacatagagaccagccaagacaagacaaacgcttctccctcactcacc |
100 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34262215 |
cttaatttcgagtaaataaactttatttaccattcaactgaatctcatattacacatagagaccagccaagacaagacaaacgcttctccctcactcacc |
34262116 |
T |
|
| Q |
101 |
cccacaaaccaaaccaaacctgtcacatagagactcttcctcacgccacaacactaatcatcaaatcaaactcaaagttatgtaattatgttatgttccc |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34262115 |
cccaccaaccaaaccaaacctgtcacatagagactcttcctcacgccacaacactaatcatcaaatcaaactcaaagttatgtaattatgttatgttccc |
34262016 |
T |
|
| Q |
201 |
ttaactcattttggctccattc |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
34262015 |
ttaactcattttggctccattc |
34261994 |
T |
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