View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9834_low_3 (Length: 246)
Name: NF9834_low_3
Description: NF9834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9834_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 47956773 - 47957014
Alignment:
| Q |
1 |
aaagtcactaattcactacgttctatactgcttgacagttggaagaaatgaaaagctcccatgccttagcaatggtatctactaaggaaacaactgatca |
100 |
Q |
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| T |
47956773 |
aaagtcactaattcactacgttctatactgcttgacagttggaagaaatgaaaagctcccatgccttagcaatggtatctactaaggaaacaactgatca |
47956872 |
T |
|
| Q |
101 |
tgaatcaccaaataaagatgattcttgaaggttgcattacattactggagtatctaacctggttttcaacttttctgttgcttttttgtcatcgagtggt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
47956873 |
tgaatcaccaaataaagatgattcttgaaggttgcattacattgatggagtatctaacctggttttcaacttttctgttgcttttttgtcattgagtggt |
47956972 |
T |
|
| Q |
201 |
tatatgttaatgttggtttgttcattgtttcttgtctctgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
47956973 |
tatatgttaatgttggtttgttcattgtttcttgtctctgct |
47957014 |
T |
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