View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9834_low_7 (Length: 229)
Name: NF9834_low_7
Description: NF9834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9834_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 47956359 - 47956583
Alignment:
| Q |
6 |
acaattcactatacgtacggaaaggaatgaggttggggactgacaagtgacagaaaa-agagaataaatgaagacatcggccaatcattatccctgactg |
104 |
Q |
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| T |
47956359 |
acaattcactatacgtacagaaaggaatgaggttggggactgacaagtgacagaaaaaagagaataaatgaagacatcggccaatcattatccctgactg |
47956458 |
T |
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| Q |
105 |
attgtgcttgataattataataagattattacattcaaagatcgtgtgcttccatnnnnnnntcgcatagcttaacaaatcaacatttatagggattgga |
204 |
Q |
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| T |
47956459 |
attgtgcttgataattataataagattgttacattcaaagatcgcgtgcttccataaaaaaatcgcatagcttatcaaatcaacatttatagggattgga |
47956558 |
T |
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| Q |
205 |
aaattgtatcaggttaattatcatc |
229 |
Q |
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| T |
47956559 |
aaattgtatcaggttaattatcatc |
47956583 |
T |
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