View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9835_high_1 (Length: 501)

Name: NF9835_high_1
Description: NF9835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9835_high_1
NF9835_high_1
[»] chr3 (15 HSPs)
chr3 (263-484)||(32901451-32901672)
chr3 (263-484)||(42643776-42643997)
chr3 (1-106)||(32901867-32901972)
chr3 (2-106)||(42644211-42644315)
chr3 (2-102)||(52736716-52736817)
chr3 (24-102)||(30301260-30301336)
chr3 (29-102)||(50671880-50671953)
chr3 (3-78)||(32932162-32932238)
chr3 (29-98)||(25181166-25181235)
chr3 (29-102)||(44225517-44225590)
chr3 (3-102)||(4486764-4486864)
chr3 (45-102)||(53567883-53567940)
chr3 (29-102)||(29252197-29252270)
chr3 (29-102)||(10852789-10852862)
chr3 (54-102)||(21023316-21023364)
[»] scaffold0015 (1 HSPs)
scaffold0015 (29-102)||(65452-65525)
[»] chr5 (7 HSPs)
chr5 (3-102)||(32560319-32560419)
chr5 (31-102)||(43152438-43152509)
chr5 (31-102)||(3748864-3748935)
chr5 (2-102)||(19204049-19204150)
chr5 (51-102)||(33740851-33740902)
chr5 (29-78)||(43045247-43045296)
chr5 (29-94)||(22811000-22811065)
[»] chr4 (12 HSPs)
chr4 (39-102)||(38306201-38306264)
chr4 (2-102)||(20676987-20677087)
chr4 (27-102)||(1589668-1589743)
chr4 (31-102)||(40286226-40286297)
chr4 (21-102)||(20231919-20232000)
chr4 (2-102)||(14597672-14597773)
chr4 (31-94)||(46957968-46958031)
chr4 (403-481)||(1594086-1594164)
chr4 (29-83)||(22699698-22699752)
chr4 (29-83)||(22980778-22980832)
chr4 (29-83)||(22994365-22994419)
chr4 (31-83)||(28658051-28658103)
[»] chr8 (7 HSPs)
chr8 (2-91)||(29970773-29970863)
chr8 (8-101)||(35239434-35239527)
chr8 (2-86)||(35550198-35550282)
chr8 (5-102)||(12124782-12124880)
chr8 (29-99)||(39219684-39219754)
chr8 (29-83)||(19649165-19649219)
chr8 (6-102)||(15115682-15115779)
[»] chr2 (8 HSPs)
chr2 (24-102)||(37543866-37543944)
chr2 (29-102)||(5055130-5055203)
chr2 (31-91)||(1763192-1763252)
chr2 (29-102)||(23360004-23360077)
chr2 (29-94)||(29844146-29844211)
chr2 (52-102)||(14532042-14532092)
chr2 (2-91)||(12110847-12110936)
chr2 (29-102)||(23377465-23377538)
[»] chr1 (7 HSPs)
chr1 (2-102)||(7765332-7765433)
chr1 (2-95)||(36447725-36447818)
chr1 (29-102)||(4346950-4347023)
chr1 (29-102)||(5930736-5930809)
chr1 (2-102)||(7335928-7336029)
chr1 (29-102)||(29438562-29438635)
chr1 (53-89)||(47981895-47981931)
[»] chr7 (6 HSPs)
chr7 (26-102)||(38494189-38494265)
chr7 (6-102)||(16353401-16353497)
chr7 (37-102)||(20088842-20088907)
chr7 (31-102)||(37148675-37148746)
chr7 (29-102)||(33936883-33936956)
chr7 (2-83)||(4228539-4228621)
[»] chr6 (2 HSPs)
chr6 (31-102)||(3605829-3605900)
chr6 (26-98)||(28020523-28020594)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-102)||(219605-219706)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-102)||(199442-199518)
[»] scaffold0184 (1 HSPs)
scaffold0184 (5-102)||(6914-7010)
[»] scaffold0172 (1 HSPs)
scaffold0172 (2-91)||(15305-15394)


Alignment Details
Target: chr3 (Bit Score: 144; Significance: 2e-75; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 263 - 484
Target Start/End: Complemental strand, 32901672 - 32901451
Alignment:
Q  263 cacactttccaccaaacagtgtcttcttctacctttaaatttctgcaacaaccnnnnnnnttcacagcaacacnnnnnnntgacgcagactttagtcaac 362  Q
    |||||||| || | ||||||||||||||||||||| | |||||||||||||||       |||||||||||||       |||||||||||| |||||||    
T  32901672 cacacttttcatcgaacagtgtcttcttctaccttcagatttctgcaacaaccaaaagaattcacagcaacacaaaaaaatgacgcagacttcagtcaac 32901573  T
Q  363 agaaatacagagtaatgaatttctcacataggtgaatgagtttttcaaatataacaagatatgtgaaatgaattgatgtgattcaaggacaaaagagaca 462  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32901572 agaaatacagagtaatgaatttctcacataggtgaatggatttttcaaatataacaagatatgtgaaaggaattgatgtgattcaaggacaaaagagaca 32901473  T
Q  463 aattgatgttatgtatttccac 484  Q
    ||||||||||||||||||||||    
T  32901472 aattgatgttatgtatttccac 32901451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 263 - 484
Target Start/End: Complemental strand, 42643997 - 42643776
Alignment:
Q  263 cacactttccaccaaacagtgtcttcttctacctttaaatttctgcaacaaccnnnnnnnttcacagcaacacnnnnnnntgacgcagactttagtcaac 362  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||        ||| ||||||||       |||||||||||| |||||||    
T  42643997 cacactttccaccgaacagtgtcttcttctacctttaaatttctgcaacaaccaaaaaaaatcaaagcaacacaaaaaaatgacgcagacttcagtcaac 42643898  T
Q  363 agaaatacagagtaatgaatttctcacataggtgaatgagtttttcaaatataacaagatatgtgaaatgaattgatgtgattcaaggacaaaagagaca 462  Q
    | |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  42643897 aaaaatacagagtaatgaatttctcatataggtgaatgggtttttcaaatataaaaagatatgtgaaaggaattgatgtgattcaaggacaaaagagaca 42643798  T
Q  463 aattgatgttatgtatttccac 484  Q
    ||||| ||||||||||||||||    
T  42643797 aattgctgttatgtatttccac 42643776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32901972 - 32901867
Alignment:
Q  1 cgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32901972 cgtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtgaatgacca 32901873  T
Q  101 aagtag 106  Q
    ||||||    
T  32901872 aagtag 32901867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 42644315 - 42644211
Alignment:
Q  2 gtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaa 101  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42644315 gtgatttatgtttggatattttataataaaaatgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgtttttgggtgtgtaaatgaccaa 42644216  T
Q  102 agtag 106  Q
    |||||    
T  42644215 agtag 42644211  T

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Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 52736817 - 52736716
Alignment:
Q  2 gtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacca 100  Q
    ||||||| |||||| ||| ||||| ||||||||||||||||| |||| ||||||||| |||||||||||| |||||||||||||| ||||||||||| ||    
T  52736817 gtgatttgtgtttggatacttttacaataaaagtgatttgtatgaaatatgttgtttagatattttgtgtcaaaattgcttttggttgtgtaaatgatca 52736718  T
Q  101 aa 102  Q
    ||    
T  52736717 aa 52736716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 30301260 - 30301336
Alignment:
Q  24 ataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||| |||||||||||| |||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  30301260 ataatagaagtgatttgtatgaaagatgttgtttggatatt--gtgtcaaaattgcttttgggtgtgtaaatgaccaaa 30301336  T

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Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 50671880 - 50671953
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||||  | ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||    
T  50671880 aaaagtgatttacatgaaaaatgttgtttggatattttgtattaaaattgattttggttgtgtaaatgatcaaa 50671953  T

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Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 32932162 - 32932238
Alignment:
Q  3 tgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 78  Q
    |||||||||||||||||  ||||| | |||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  32932162 tgatttatgtttgaatacctttattacaaaagtgatttgtatgaaatatgttgtttggatattttgtgtcaaaattg 32932238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 25181235 - 25181166
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgac 98  Q
    |||||||||||||   ||| |||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  25181235 aaaagtgatttgtttaaaatatgttgtttggatattttgtgtcaaaattgattttgggtgtttaaatgac 25181166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 44225590 - 44225517
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    ||||||| |||||| ||||||||||||||||||| |   ||| |||||||||||||| ||||||||||||||||    
T  44225590 aaaagtgctttgtatgaaaaatgttgtttggatactcgatgtcaaaattgcttttggatgtgtaaatgaccaaa 44225517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 4486864 - 4486764
Alignment:
Q  3 tgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaa 101  Q
    ||||||||||||||||| ||||| || | | || ||||| | ||||||| |||| |||||||||||||| | |||||||||| ||||||||||||| |||    
T  4486864 tgatttatgtttgaatacttttaaaagataggtaatttgcatgaaaaatattgtgtggatattttgtgtaacaattgctttttggtgtgtaaatgatcaa 4486765  T
Q  102 a 102  Q
    |    
T  4486764 a 4486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 53567940 - 53567883
Alignment:
Q  45 aaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||| ||||||||||||||||||| |||||||||||| | | ||||||||||||||    
T  53567940 aaaaatattgtttggatattttgtgtcaaaattgcttttcgttatgtaaatgaccaaa 53567883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 29252197 - 29252270
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    ||||||||||| || |||| |||||||||| | |||||| || |||||||||||||| | ||||||| ||||||    
T  29252197 aaaagtgatttatatgaaagatgttgtttgaaaattttgcgtcaaaattgcttttggatatgtaaattaccaaa 29252270  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 10852789 - 10852862
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    ||||||||||| || |||||||||| ||||||| ||||| || | ||||||||||   |||||||| |||||||    
T  10852789 aaaagtgatttatatgaaaaatgttatttggatgttttgagtcagaattgcttttaaatgtgtaaaagaccaaa 10852862  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 21023316 - 21023364
Alignment:
Q  54 gtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    ||||||||||||||| ||  |||||||||||||||||| || |||||||    
T  21023316 gtttggatattttgtatttgaattgcttttgggtgtgtgaaagaccaaa 21023364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 65525 - 65452
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||||||| ||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  65525 aaaagtgatttgtatgaaaaatattgtttggatactttgtgtcaaaattgattttgggtgtgtaaatgaccaaa 65452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 8e-19; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 32560319 - 32560419
Alignment:
Q  3 tgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaa 101  Q
    |||||| |||||| ||| |||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||||||| | | || ||||||||||    
T  32560319 tgatttttgtttggatacttttatgataaaagtgattcatatgaaaaatgttgtttggatattttgtgtcaaaattgcttttagttatgaaaatgaccaa 32560418  T
Q  102 a 102  Q
    |    
T  32560419 a 32560419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 43152438 - 43152509
Alignment:
Q  31 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||  | ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  43152438 aagtgatttacatgaaaaatgttgtttggatattttgtgtcaaaattgattttggttgtgtaaatgaccaaa 43152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 3748935 - 3748864
Alignment:
Q  31 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||| ||||||| |||| || |||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  3748935 aagttatttgtatgaaagattttgtttggatatttggtgtcaaaattacttttgggtgtgtaaatgaccaaa 3748864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 19204049 - 19204150
Alignment:
Q  2 gtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacca 100  Q
    ||||||| |||||| ||| |||||| ||| ||||||||  || ||||||| ||||||||||||||||||| |||||||||||| | | || |||||||||    
T  19204049 gtgatttttgtttggatacttttatgatagaagtgattcatatgaaaaatattgtttggatattttgtgtcaaaattgcttttagttatgaaaatgacca 19204148  T
Q  101 aa 102  Q
    ||    
T  19204149 aa 19204150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 33740902 - 33740851
Alignment:
Q  51 gttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    ||||||| |||||||||||| |||||||| ||| ||||||||||||||||||    
T  33740902 gttgtttagatattttgtgtcaaaattgcgtttaggtgtgtaaatgaccaaa 33740851  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 43045247 - 43045296
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattg 78  Q
    |||||||||||||| |||| |||||||||||||||||||| | |||||||    
T  43045247 aaaagtgatttgtatgaaatatgttgtttggatattttgtatcaaaattg 43045296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 22811065 - 22811000
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaa 94  Q
    |||||||||| ||| ||||||||||||||| || ||||| || | |||||||||| | ||||||||    
T  22811065 aaaagtgattagtatgaaaaatgttgtttgcatgttttgagtcagaattgcttttagatgtgtaaa 22811000  T

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Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 38306201 - 38306264
Alignment:
Q  39 tgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  38306201 tgtatgaaaaatgttgtttggatattttatgttaaaattacttttgggtatgtaaatgaccaaa 38306264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 20677087 - 20676987
Alignment:
Q  2 gtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaa 101  Q
    |||||||||||||| ||| || ||| || ||||||||| ||  |||  ||||||||||||||||||||| |||||||||||||| | ||||||| |||||    
T  20677087 gtgatttatgtttggatacttcatagtagaagtgatttatacaaaagttgttgtttggatattttgtgtcaaaattgcttttggatatgtaaattaccaa 20676988  T
Q  102 a 102  Q
    |    
T  20676987 a 20676987  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 1589668 - 1589743
Alignment:
Q  27 ataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||| ||||||||| ||||| | ||||||||||||||| |||| ||||||||||| ||| ||||||||||||||    
T  1589668 ataaaattgatttgtatgaaaagtattgtttggatattttatgttgaaattgctttttggtttgtaaatgaccaaa 1589743  T

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Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 40286297 - 40286226
Alignment:
Q  31 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||  | |||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  40286297 aagtgatttacatgaaaaatgttgtttggctattttgtgtcaaaattgattttggttgtgtaaatgaccaaa 40286226  T

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Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 20232000 - 20231919
Alignment:
Q  21 tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||| |||| |||||||||||| |||| ||||||||| |||||||||||| |||||||||||||| | | || |||||||||    
T  20232000 tttacaatagaagtgatttgtatgaaatatgttgtttagatattttgtgtcaaaattgcttttggttatatagatgaccaaa 20231919  T

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Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 14597672 - 14597773
Alignment:
Q  2 gtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacca 100  Q
    |||||||||||||| |||| ||||  ||| ||||||||  || || | |||||||||||||||||||||| |||||||||||| | | || |||||||||    
T  14597672 gtgatttatgtttggatatctttaagatagaagtgattcttatgagagatgttgtttggatattttgtgtcaaaattgcttttagttatgaaaatgacca 14597771  T
Q  101 aa 102  Q
    ||    
T  14597772 aa 14597773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 46958031 - 46957968
Alignment:
Q  31 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaa 94  Q
    ||||| |||||| |||||||||||||||||| |||||||| | |||||||||| | ||||||||    
T  46958031 aagtgctttgtatgaaaaatgttgtttggatgttttgtgtcagaattgcttttagatgtgtaaa 46957968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 481
Target Start/End: Original strand, 1594086 - 1594164
Alignment:
Q  403 tttttcaaatataacaagatatgtgaaatgaattgatgtgattcaaggacaaaagagacaaattgatgttatgtatttc 481  Q
    |||||||||||||| ||| | ||||||| ||| ||||| ||||||||| |||||| ||||||  |||||| ||||||||    
T  1594086 tttttcaaatataaaaaggtttgtgaaaggaagtgatgagattcaagggcaaaagggacaaacagatgttgtgtatttc 1594164  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 22699752 - 22699698
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctttt 83  Q
    |||||||||||||| ||||||| |||||||||| ||||| || | ||||||||||    
T  22699752 aaaagtgatttgtatgaaaaattttgtttggatgttttgagtcataattgctttt 22699698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 22980778 - 22980832
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctttt 83  Q
    |||||||||||||| ||||||| |||||||||| ||||| || | ||||||||||    
T  22980778 aaaagtgatttgtatgaaaaattttgtttggatgttttgagtcataattgctttt 22980832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 22994365 - 22994419
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctttt 83  Q
    |||||||||||||| ||||||| |||||||||| ||||| || | ||||||||||    
T  22994365 aaaagtgatttgtatgaaaaattttgtttggatgttttgagtcataattgctttt 22994419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 28658103 - 28658051
Alignment:
Q  31 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctttt 83  Q
    |||||||||||| ||||||| ||||||||||||||| ||| | ||||| ||||    
T  28658103 aagtgatttgtatgaaaaatattgtttggatattttttgtaagaattgttttt 28658051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 29970863 - 29970773
Alignment:
Q  2 gtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgt 91  Q
    |||||||||||||| |||  |||| |||| || ||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  29970863 gtgatttatgtttggatacctttacaatagaaatgatttgtatgaaaaatgttatttgaatattttatgttaaaattgcttttgggtgtgt 29970773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 35239527 - 35239434
Alignment:
Q  8 tatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaa 101  Q
    |||||||||||| || | || ||||||||||| || ||||| || | |||||||||||||  ||| |||||||||||| |||||||||||||||    
T  35239527 tatgtttgaatacttcaaaacaaaagtgatttttatgaaaattgatttttggatattttgcattagaattgcttttggatgtgtaaatgaccaa 35239434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 35550282 - 35550198
Alignment:
Q  2 gtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttggg 86  Q
    ||||||| |||||| ||  || ||| || ||||||||  || |||| |||||||||||||||||||||| |||||||||||||||    
T  35550282 gtgatttttgtttggatgcttcatagtagaagtgattgatacgaaagatgttgtttggatattttgtgtcaaaattgcttttggg 35550198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 12124782 - 12124880
Alignment:
Q  5 atttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    ||||||||||| |||  ||||| ||| |||||||||  | ||||||||||||| | ||||||| ||| ||||||| |||||| ||||||||||| ||||    
T  12124782 atttatgtttggatacctttatgatagaagtgatttacatgaaaaatgttgttcgaatattttatgtcaaaattgattttggttgtgtaaatgatcaaa 12124880  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 39219754 - 39219684
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacc 99  Q
    ||||||| |||||| ||||||||||||||||||| |  |||| |||||||||||||| ||  |||||||||    
T  39219754 aaaagtgctttgtatgaaaaatgttgtttggatactcggtgtcaaaattgcttttggatgcataaatgacc 39219684  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 19649219 - 19649165
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctttt 83  Q
    |||||||||||||| ||||||| |||||||||| ||||| || | ||||||||||    
T  19649219 aaaagtgatttgtatgaaaaattttgtttggatgttttgagtcagaattgctttt 19649165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 15115682 - 15115779
Alignment:
Q  6 tttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||| |||| |||| || | ||||||||||||   |||||||||||||||||   ||||| |||||||||||| |||  | |||||||||||    
T  15115682 tttatgtttggatatctttacaaaagaagtgatttgtatataaaatgttgtttggatacagtgtgtcaaaattgcttttaggtacgcaaatgaccaaa 15115779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 37543944 - 37543866
Alignment:
Q  24 ataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||| |||||||||| ||||||||||| ||| || |||||||||||||||| |||| | ||||||||||||||||    
T  37543944 ataataaacgtgatttgtatgaaaaatgttgattgaattttttgtgttaaaattgtttttagatgtgtaaatgaccaaa 37543866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 5055203 - 5055130
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||| ||||||||| | || ||| |||||||||||||||||| ||||||||||||| | ||| |||||||||||    
T  5055203 aaaattgatttgtatgtaagatgatgtttggatattttgtgtcaaaattgcttttgagcgtggaaatgaccaaa 5055130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 1763252 - 1763192
Alignment:
Q  31 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgt 91  Q
    ||||||||| || ||||| || |||||||||||||||| ||| ||||||||||||||||||    
T  1763252 aagtgatttttatgaaaactgatgtttggatattttgtattagaattgcttttgggtgtgt 1763192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 23360004 - 23360077
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||| ||| |||||||||||||||||| |||||  | | |||||||||| | |||||||| |||||||    
T  23360004 aaaagtgattagtatgaaaaatgttgtttggatgttttgaatcagaattgcttttagatgtgtaaaagaccaaa 23360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 29844211 - 29844146
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaa 94  Q
    |||||||||||||| |||||||||||||||||| ||||| || | |||| ||||| | ||||||||    
T  29844211 aaaagtgatttgtatgaaaaatgttgtttggatgttttgagtcataattacttttagatgtgtaaa 29844146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 14532042 - 14532092
Alignment:
Q  52 ttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||| ||||| |||| ||||||| |||||| ||||||||||||||||    
T  14532042 ttgtttgggtatttcgtgtcaaaattgtttttggttgtgtaaatgaccaaa 14532092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 12110936 - 12110847
Alignment:
Q  2 gtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgt 91  Q
    |||||||||||||| ||| || | || | ||||||||| || ||||| || |||||| ||||||||  ||| |||||||||||| |||||    
T  12110936 gtgatttatgtttggatacttcaaaacataagtgatttttatgaaaactggtgtttgaatattttgcattagaattgcttttggatgtgt 12110847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 23377538 - 23377465
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||| |||  ||||||||||||||||| |||||  | | |||||||||| | |||||||| |||||||    
T  23377538 aaaagtgattagtataaaaaatgttgtttggatgttttgaatcagaattgcttttagatgtgtaaaagaccaaa 23377465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 7765332 - 7765433
Alignment:
Q  2 gtgatttatgtttgaata-ttttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacca 100  Q
    ||||||| |||||| ||| |||||| ||| ||||||||  || ||||||||||||||||||||||||||| |||||||||||| | | || |||||||||    
T  7765332 gtgatttttgtttggatacttttatgatagaagtgattcatatgaaaaatgttgtttggatattttgtgtcaaaattgcttttagttatgaaaatgacca 7765431  T
Q  101 aa 102  Q
    ||    
T  7765432 aa 7765433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 36447725 - 36447818
Alignment:
Q  2 gtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaat 95  Q
    |||||||||||| ||||  || ||| || ||||||||| ||  ||| |||||||||||||||||||||| |||||||||||||| | |||||||    
T  36447725 gtgatttatgttggaatgcttcatagtagaagtgatttatataaaagatgttgtttggatattttgtgtcaaaattgcttttggatatgtaaat 36447818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 4347023 - 4346950
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||||||| ||||||| |||||||||| ||||| || | |||||||||| | |||||||| |||||||    
T  4347023 aaaagtgatttgtatgaaaaattttgtttggatgttttgagtgagaattgcttttagatgtgtaaaagaccaaa 4346950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 5930809 - 5930736
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||||||| ||||||||||||||| || ||||| || | |||||||||| | |||||||| |||||||    
T  5930809 aaaagtgatttgtatgaaaaatgttgtttgaatgttttgagtgagaattgcttttagatgtgtaaaagaccaaa 5930736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 7335928 - 7336029
Alignment:
Q  2 gtgatttatgtttgaatattttat-aataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacca 100  Q
    ||||||||||||||||| |||||  || |||||||||||  |  ||| ||| ||||||||||  |||  | |||||||||||| ||||||||||| ||||    
T  7335928 gtgatttatgtttgaatgttttaacaacaaaagtgatttacatcaaagatggtgtttggatagcttgaatcaaaattgcttttaggtgtgtaaattacca 7336027  T
Q  101 aa 102  Q
    ||    
T  7336028 aa 7336029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 29438635 - 29438562
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||| ||||||||| | ||||| ||||||||||||| ||||| ||| ||||||||  || || |||||||||||    
T  29438635 aaaaatgatttgtatgtaaaatattgtttggatattgtgtgtcaaacttgcttttaagtatgcaaatgaccaaa 29438562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 47981895 - 47981931
Alignment:
Q  53 tgtttggatattttgtgttaaaattgcttttgggtgt 89  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  47981895 tgtttggatattttgtattagaattgcttttgggtgt 47981931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 38494265 - 38494189
Alignment:
Q  26 aataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||| |||||||||||| |||| || |||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  38494265 aatagaagtgatttgtatgaaatattttgtttggatatttggtgtcaaaattgtttttgagtgtgtaaatgaccaaa 38494189  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 16353497 - 16353401
Alignment:
Q  6 tttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    ||||||||||||||| ||   | |||| | ||||||| | ||||||||||||||||| | ||||| |||||||||||| |||||| |||||||||||    
T  16353497 tttatgtttgaatatctttgcaaaaaaataatttgtatgtaaaatgttgtttggatactgtgtgtcaaaattgcttttaggtgtgcaaatgaccaaa 16353401  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 20088907 - 20088842
Alignment:
Q  37 tttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||| |||||||||||||||||| |||||||| | |||||||||| | |||||||| |||||||    
T  20088907 tttgtatgaaaaatgttgtttggatgttttgtgtcagaattgcttttagatgtgtaaaagaccaaa 20088842  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 37148675 - 37148746
Alignment:
Q  31 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||||| |||  || ||||||||||||||| ||| ||||||| |||| | ||||||||||||||||    
T  37148675 aagtgatttgtatgaatgatattgtttggatattttatgtcaaaattgattttcgttgtgtaaatgaccaaa 37148746  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 33936883 - 33936956
Alignment:
Q  29 aaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||||||| |||||||||||||||||| |||||  | | | |||||||| | |||||||| |||||||    
T  33936883 aaaagtgatttgtatgaaaaatgttgtttggatgttttgaatcagacttgcttttagatgtgtaaaagaccaaa 33936956  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 4228621 - 4228539
Alignment:
Q  2 gtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgctttt 83  Q
    |||||||||||||| |||  ||||  ||| ||||||||  || |||| |||||||||| ||||||||||| ||||||||||||    
T  4228621 gtgatttatgtttggatacctttaagatagaagtgattcatatgaaagatgttgtttgaatattttgtgtcaaaattgctttt 4228539  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 3605829 - 3605900
Alignment:
Q  31 aagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||||||||  | |||||||||||||||  |||||||||| ||||||| |||||| ||||||||||||||||    
T  3605829 aagtgatttacatgaaaaatgttgtttgactattttgtgtcaaaattgattttggttgtgtaaatgaccaaa 3605900  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 28020523 - 28020594
Alignment:
Q  26 aataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgac 98  Q
    |||| |||||||||||| |||||||||||||||||||||||  | | ||||||||||||||| | ||||||||    
T  28020523 aatataagtgatttgtacgaaaaatgttgtttggatattttaag-tcaaattgcttttgggtttataaatgac 28020594  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 219706 - 219605
Alignment:
Q  2 gtgatttatgtttgaatat-tttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgacca 100  Q
    |||||||||||||| |||| ||||  ||| ||||||||  || || | |||||||||||||||||||||| |||||||||||| | | || |||||||||    
T  219706 gtgatttatgtttggatatctttaagatagaagtgattcttatgagagatgttgtttggatattttgtgtcaaaattgcttttagttatgaaaatgacca 219607  T
Q  101 aa 102  Q
    ||    
T  219606 aa 219605  T

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Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 199442 - 199518
Alignment:
Q  26 aataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    |||| ||||| |||||| |||||||||||||||||| |||||||| | |||||||||| |  ||||||| |||||||    
T  199442 aatataagtgctttgtatgaaaaatgttgtttggatgttttgtgtcagaattgcttttagaagtgtaaaagaccaaa 199518  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 7010 - 6914
Alignment:
Q  5 atttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgtaaatgaccaaa 102  Q
    ||||||||||| ||| || | || ||||||||||||||  ||| |||||||||  ||| ||| ||| ||||||| |||||  ||||||||||||||||    
T  7010 atttatgtttggatacttcaaaacaaaagtgatttgtataaaatatgttgtttaaata-tttatgtcaaaattgattttgaatgtgtaaatgaccaaa 6914  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 15305 - 15394
Alignment:
Q  2 gtgatttatgtttgaatattttataataaaagtgatttgtaggaaaaatgttgtttggatattttgtgttaaaattgcttttgggtgtgt 91  Q
    |||||||||||||| ||| || | || | ||||||||| || ||||| || |||||| ||||||||  ||| |||||||||||| |||||    
T  15305 gtgatttatgtttggatacttcaaaacataagtgatttttatgaaaactggtgtttgaatattttgcattagaattgcttttggatgtgt 15394  T

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