View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9835_low_14 (Length: 257)

Name: NF9835_low_14
Description: NF9835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9835_low_14
NF9835_low_14
[»] chr6 (8 HSPs)
chr6 (1-102)||(35163751-35163852)
chr6 (1-103)||(20685354-20685456)
chr6 (1-99)||(17948713-17948811)
chr6 (1-103)||(19686828-19686930)
chr6 (1-113)||(2711741-2711847)
chr6 (3-103)||(15070154-15070254)
chr6 (9-103)||(14505533-14505626)
chr6 (29-100)||(24336647-24336718)
[»] chr7 (16 HSPs)
chr7 (1-113)||(35109710-35109822)
chr7 (1-103)||(38265238-38265340)
chr7 (1-102)||(21577099-21577200)
chr7 (1-99)||(37095211-37095309)
chr7 (1-103)||(34721863-34721965)
chr7 (4-113)||(12472140-12472249)
chr7 (3-103)||(38405157-38405257)
chr7 (3-103)||(16059356-16059456)
chr7 (4-99)||(41151205-41151301)
chr7 (1-103)||(245265-245367)
chr7 (3-103)||(18116947-18117047)
chr7 (5-103)||(11216798-11216896)
chr7 (1-103)||(45278481-45278583)
chr7 (3-103)||(48176428-48176529)
chr7 (1-100)||(28407540-28407635)
chr7 (1-42)||(39234853-39234894)
[»] chr8 (20 HSPs)
chr8 (1-99)||(11404034-11404132)
chr8 (1-102)||(22711539-22711640)
chr8 (3-103)||(17095579-17095679)
chr8 (1-103)||(19723340-19723442)
chr8 (1-103)||(32296640-32296742)
chr8 (3-113)||(28739564-28739674)
chr8 (1-99)||(36261679-36261777)
chr8 (1-103)||(29767217-29767317)
chr8 (1-103)||(4840169-4840271)
chr8 (20-108)||(21355004-21355092)
chr8 (1-113)||(30682858-30682969)
chr8 (3-86)||(11909426-11909509)
chr8 (1-99)||(41553318-41553416)
chr8 (4-99)||(43288105-43288200)
chr8 (1-103)||(11610309-11610411)
chr8 (37-103)||(24475033-24475099)
chr8 (1-60)||(27879561-27879620)
chr8 (56-103)||(27881044-27881091)
chr8 (1-60)||(28019742-28019801)
chr8 (56-103)||(28021225-28021272)
[»] chr5 (12 HSPs)
chr5 (1-103)||(17064352-17064454)
chr5 (3-103)||(20983006-20983106)
chr5 (1-84)||(37976598-37976681)
chr5 (1-91)||(41910865-41910955)
chr5 (5-99)||(31673863-31673956)
chr5 (4-95)||(39162859-39162947)
chr5 (1-99)||(5009418-5009515)
chr5 (1-56)||(38255559-38255614)
chr5 (33-99)||(18303343-18303409)
chr5 (1-43)||(35237060-35237102)
chr5 (57-90)||(21968782-21968815)
chr5 (1-66)||(38031257-38031322)
[»] chr4 (28 HSPs)
chr4 (3-113)||(46494401-46494511)
chr4 (3-103)||(51066522-51066622)
chr4 (1-103)||(7173586-7173688)
chr4 (1-103)||(29576444-29576546)
chr4 (1-113)||(36192560-36192672)
chr4 (1-113)||(51713966-51714078)
chr4 (1-103)||(30970385-30970487)
chr4 (1-103)||(55231716-55231818)
chr4 (4-99)||(32139197-32139292)
chr4 (3-99)||(41523430-41523526)
chr4 (1-104)||(2570229-2570332)
chr4 (1-84)||(22304092-22304175)
chr4 (1-103)||(39863779-39863881)
chr4 (1-94)||(676766-676859)
chr4 (30-103)||(8740477-8740550)
chr4 (1-103)||(50905777-50905879)
chr4 (1-113)||(47626994-47627106)
chr4 (2-94)||(51279035-51279127)
chr4 (1-99)||(4080553-4080651)
chr4 (3-103)||(2294719-2294813)
chr4 (37-100)||(22423408-22423471)
chr4 (4-97)||(50399646-50399739)
chr4 (3-65)||(23084468-23084530)
chr4 (4-68)||(37990599-37990663)
chr4 (3-46)||(51066240-51066283)
chr4 (8-53)||(28202598-28202643)
chr4 (4-97)||(40012548-40012640)
chr4 (6-87)||(28202701-28202782)
[»] chr3 (29 HSPs)
chr3 (1-103)||(8400884-8400986)
chr3 (1-103)||(50823727-50823829)
chr3 (1-103)||(50852031-50852133)
chr3 (1-103)||(7417827-7417929)
chr3 (1-102)||(35198795-35198896)
chr3 (3-98)||(55468033-55468129)
chr3 (1-103)||(22371730-22371832)
chr3 (1-99)||(22855920-22856018)
chr3 (1-103)||(52545350-52545452)
chr3 (3-103)||(34824585-34824685)
chr3 (3-95)||(43334057-43334149)
chr3 (144-245)||(32902062-32902168)
chr3 (1-85)||(37330608-37330692)
chr3 (1-103)||(19872484-19872586)
chr3 (1-85)||(30534903-30534987)
chr3 (1-103)||(29635897-29636000)
chr3 (1-85)||(37454745-37454829)
chr3 (1-72)||(25910667-25910738)
chr3 (4-91)||(42876256-42876343)
chr3 (37-103)||(48077978-48078044)
chr3 (1-100)||(25589253-25589345)
chr3 (3-93)||(30203657-30203744)
chr3 (6-99)||(50726003-50726096)
chr3 (6-99)||(50786752-50786845)
chr3 (1-47)||(358943-358989)
chr3 (1-35)||(773674-773708)
chr3 (5-50)||(31297529-31297574)
chr3 (54-95)||(38724459-38724500)
chr3 (4-68)||(39623823-39623887)
[»] chr2 (25 HSPs)
chr2 (1-103)||(17136416-17136518)
chr2 (1-102)||(2754052-2754153)
chr2 (1-103)||(45136971-45137073)
chr2 (1-104)||(36836330-36836433)
chr2 (1-103)||(21637926-21638028)
chr2 (1-103)||(36380133-36380235)
chr2 (1-103)||(40156069-40156171)
chr2 (1-103)||(44650422-44650524)
chr2 (1-103)||(25987662-25987765)
chr2 (9-103)||(6672802-6672896)
chr2 (1-103)||(10745233-10745335)
chr2 (1-103)||(558440-558542)
chr2 (1-103)||(26690183-26690285)
chr2 (1-99)||(33066623-33066721)
chr2 (2-103)||(30372682-30372783)
chr2 (1-100)||(2357077-2357175)
chr2 (1-99)||(21487181-21487280)
chr2 (1-103)||(3200910-3201012)
chr2 (1-103)||(5039449-5039551)
chr2 (1-103)||(7860147-7860249)
chr2 (1-99)||(13047157-13047252)
chr2 (3-98)||(4553561-4553657)
chr2 (1-49)||(2098827-2098875)
chr2 (54-94)||(30477240-30477280)
chr2 (62-103)||(20961510-20961551)
[»] chr1 (16 HSPs)
chr1 (3-103)||(30054445-30054545)
chr1 (1-113)||(30370061-30370173)
chr1 (1-117)||(45324021-45324137)
chr1 (1-103)||(22024132-22024234)
chr1 (1-104)||(14498080-14498183)
chr1 (1-99)||(4573412-4573510)
chr1 (3-103)||(21090144-21090244)
chr1 (1-103)||(12025210-12025312)
chr1 (1-99)||(30850841-30850939)
chr1 (1-100)||(20014490-20014589)
chr1 (9-88)||(35371754-35371833)
chr1 (1-103)||(33762541-33762643)
chr1 (1-103)||(33763255-33763357)
chr1 (3-73)||(35618034-35618104)
chr1 (3-102)||(44438553-44438652)
chr1 (1-60)||(17015192-17015251)
[»] scaffold0021 (1 HSPs)
scaffold0021 (9-103)||(107700-107794)
[»] scaffold0691 (1 HSPs)
scaffold0691 (25-103)||(6994-7072)


Alignment Details
Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 35163751 - 35163852
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35163751 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 35163850  T
Q  101 ca 102  Q
    ||    
T  35163851 ca 35163852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20685456 - 20685354
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20685456 aattttagggtgaagggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 20685357  T
Q  101 cac 103  Q
    |||    
T  20685356 cac 20685354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17948811 - 17948713
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17948811 aattttaaggtgaggggatggtgtcccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctctctccaaag 17948713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19686828 - 19686930
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||| |||||||||| |||  ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  19686828 aattttagggtgaggggatgatgccccagtctaagggaggaaagatcttcgggctcaaagagcacttacaaaggtaattacatttacctccctacaaagg 19686927  T
Q  101 cac 103  Q
    |||    
T  19686928 cac 19686930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2711741 - 2711847
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||      |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  2711741 aattttagggtgaggggatggtg------tccaaggcagggaagaccttcgagctcaaagagcacttacaaaggtatttacatttacctccctccaaaag 2711834  T
Q  101 caccggtggggct 113  Q
    |||  ||||||||    
T  2711835 cactagtggggct 2711847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 15070254 - 15070154
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||| ||| ||| |||||||||||||||||||||    
T  15070254 tttttgggtgaggggatggtgccccagtctaaggcagggaagaccttcgggctcaatgaacacttacaaatgtaattatatttacctccctccaaaggca 15070155  T
Q  103 c 103  Q
    |    
T  15070154 c 15070154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 14505533 - 14505626
Alignment:
Q  9 ggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    ||||||||||||||||||||||||||| || |||||| ||||| || ||||||  | ||||||||||| ||||||||||||||||||||| ||||    
T  14505533 ggtgaggggatggtgccccagtccaaggcacggaagatcttcgcgcccaaagaatatttacaaaggta-ttacatttacctccctccaaaagcac 14505626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 24336718 - 24336647
Alignment:
Q  29 gtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||| ||||||||| |||| |||||||| | |||||||||| |||||||||||||||||||||||||||    
T  24336718 gtccaaggcagggaagatcttcaggctcaaaaaacacttacaaaagtatttacatttacctccctccaaagg 24336647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 9e-48; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 35109822 - 35109710
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35109822 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 35109723  T
Q  101 caccggtggggct 113  Q
    |||  ||||||||    
T  35109722 cactagtggggct 35109710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 38265238 - 38265340
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38265238 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 38265337  T
Q  101 cac 103  Q
    |||    
T  38265338 cac 38265340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21577099 - 21577200
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21577099 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcggactcaaagagcacttacaaaggtatttacatttacctccctccaaagg 21577198  T
Q  101 ca 102  Q
    ||    
T  21577199 ca 21577200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37095211 - 37095309
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37095211 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaag 37095309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34721965 - 34721863
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34721965 aattttagggtgaggggatggtgcccgagtccaaggcagggaagtccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 34721866  T
Q  101 cac 103  Q
    |||    
T  34721865 cac 34721863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 12472249 - 12472140
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  12472249 tttagggtgaggggatggtaccccagtccaagacagggaagaccttcgtgctcaaagagcacttacaaaggtaattatatttacctccctccaaaggcac 12472150  T
Q  104 cggtggggct 113  Q
      ||||||||    
T  12472149 tagtggggct 12472140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 38405157 - 38405257
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||    
T  38405157 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggttcaaagagcacttacaaagataattacatttacctccctccaaaggca 38405256  T
Q  103 c 103  Q
    |    
T  38405257 c 38405257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 16059356 - 16059456
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  16059356 ttttagggtgaggggatggtgccccagtccaaggtagggaagaccttcgggctcagagagcacttacaaaggtaattacatttacctccctgcaaaggca 16059455  T
Q  103 c 103  Q
    |    
T  16059456 c 16059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 41151301 - 41151205
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttac-aaaggtatttacatttacctccctccaaag 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  41151301 tttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaaggtaattacatttacctccctccaaag 41151205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 245265 - 245367
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| || |||||||||||||||||||| ||    
T  245265 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcgtttacaaagataattacatttacctccctccaaggg 245364  T
Q  101 cac 103  Q
    |||    
T  245365 cac 245367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 18116947 - 18117047
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  18116947 ttttagggtgaggggatggtgccccagtccaaggcagggaagatcttcgacctcaaagagcacctacaaaggtaattacatttacctccctctaaaggca 18117046  T
Q  103 c 103  Q
    |    
T  18117047 c 18117047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 11216896 - 11216798
Alignment:
Q  5 ttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    |||||||||||| ||| ||||| |||||||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11216896 ttagggtgagggaatgatgccctagtccaaagtagagaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 11216798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 45278583 - 45278481
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||| | ||||||||||||||||| || |||||||||| ||||| ||||||    
T  45278583 aattttagggtgaggggatggtgctccagtccaaggcagggaagacattcgggtttaaagagcacttacaaagataattacatttacttcccttcaaagg 45278484  T
Q  101 cac 103  Q
    |||    
T  45278483 cac 45278481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 48176529 - 48176428
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagac-agggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggc 101  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||| |||||||| | |||||||||| |||||||||||||||||| |||||||||    
T  48176529 ttttagggtgaggggatggtgccccagtccaaggggagggaaaaccttccggctcaaaaaacacttacaaaagtatttacatttacctccttccaaaggc 48176430  T
Q  102 ac 103  Q
    ||    
T  48176429 ac 48176428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28407635 - 28407540
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||||| |||||| |  |    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  28407635 aattttagggtgaggggatggtgccccaatccaaggcttg----accttcgggctcaaagagcacttacaaaagtatttacatttacctccctctaaagg 28407540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39234894 - 39234853
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacaggga 42  Q
    |||||| |||||||||||||||||||||||||| | ||||||    
T  39234894 aatttttgggtgaggggatggtgccccagtccatggcaggga 39234853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11404132 - 11404034
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11404132 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 11404034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22711640 - 22711539
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22711640 aattttaggatgaggggatggtgccccagtccaaggcaaggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 22711541  T
Q  101 ca 102  Q
    ||    
T  22711540 ca 22711539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 17095679 - 17095579
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  17095679 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcatttacaaaggtaattacatttacctccctccaaaggca 17095580  T
Q  103 c 103  Q
    |    
T  17095579 c 17095579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19723442 - 19723340
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19723442 aattttagggtgaggggatggtgccccagtccaaggcagggaagatctttgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 19723343  T
Q  101 cac 103  Q
    |||    
T  19723342 cac 19723340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32296640 - 32296742
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  32296640 aattttagggtgaggggatggtgccccaatccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctcccttcaaagg 32296739  T
Q  101 cac 103  Q
    |||    
T  32296740 cac 32296742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 28739564 - 28739674
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  28739564 ttttagggtgaggggatggtgctgcagtccaaggtagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttactttcctccaaaggca 28739663  T
Q  103 ccggtggggct 113  Q
    |  ||||||||    
T  28739664 ctagtggggct 28739674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36261777 - 36261679
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36261777 aattttaaggtgaggggatggtgccccagttcaaggcagggaagatcttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaag 36261679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29767317 - 29767217
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||    
T  29767317 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagaacacttacaaaggtaatt--atttacctcccttcaaagg 29767220  T
Q  101 cac 103  Q
    |||    
T  29767219 cac 29767217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4840271 - 4840169
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| || |||||||||||||||||| |||| | |||||||||||||||||||||    
T  4840271 aattttagggtgaggggatggtgccctagtccaaggcagggaagacctttggactcaaagagcacttacaatggtaatgacatttacctccctccaaagg 4840172  T
Q  101 cac 103  Q
    |||    
T  4840171 cac 4840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 21355004 - 21355092
Alignment:
Q  20 ggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcaccggtg 108  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  21355004 ggtgccccagtccaaggcagggaagaccttcgggttcaaagagcacttacaaaggtaattacatttacctccctccaaaggcacgggtg 21355092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30682969 - 30682858
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||| |||||||||    
T  30682969 aattttaaggtgaggggatggtgccc-agtccaaggcagggaagatcttcgggctcaaagaacacttacaaaagtatttacatttatctctctccaaagg 30682871  T
Q  101 caccggtggggct 113  Q
    |||| ||||||||    
T  30682870 caccagtggggct 30682858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 11909426 - 11909509
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacattta 86  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  11909426 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgagctcaaagagcacttagaaaggtatttacattta 11909509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41553416 - 41553318
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| | |||||||||    
T  41553416 aattttagggtgaggggatggtgctccagtctaaggcagggaagaccttcgagctcaaagaacacttacaaaggtatttacatttacgttcctccaaag 41553318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 43288200 - 43288105
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||| |||||| | || ||||||||||| ||||||||||||||||||||||    
T  43288200 tttagggtgaggggatggtgctccagtccaaggcagggaagaccttcggactcaaaaatcaattacaaaggtaattacatttacctccctccaaag 43288105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 11610411 - 11610309
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||||||| ||| ||||||||||||| |||||| ||||||||  |||||||||    
T  11610411 aattttagggtgaggggatggtgccccagtccaagataagtaagaccttcgggcttaaacagcacttacaaagatatttatatttacctttctccaaagg 11610312  T
Q  101 cac 103  Q
    |||    
T  11610311 cac 11610309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 24475033 - 24475099
Alignment:
Q  37 cagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24475033 caggaaagaccttcgggctcaaagaacacttacaaaggtatttacatttacctccctccaaaggcac 24475099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27879561 - 27879620
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaag 60  Q
    |||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||    
T  27879561 aattttagggtgaggggatggtgccccagtccaaggtagggaagatcttcaggctcaaag 27879620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 27881044 - 27881091
Alignment:
Q  56 caaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  27881044 caaagagcacttacaaaggtatttacatttacctcccttcaaaggcac 27881091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28019742 - 28019801
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaag 60  Q
    |||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||    
T  28019742 aattttagggtgaggggatggtgccccagtccaaggtagggaagatcttcaggctcaaag 28019801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 28021225 - 28021272
Alignment:
Q  56 caaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  28021225 caaagagcacttacaaaggtatttacatttacctcccttcaaaggcac 28021272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 17064454 - 17064352
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17064454 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggcttaaagagcacttacaaaggtatttacatttacctccctccaaagg 17064355  T
Q  101 cac 103  Q
    |||    
T  17064354 cac 17064352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 20983006 - 20983106
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||    
T  20983006 ttttagggtgaggggatggtgccccagtccaaggcagggaagactttcgggctcaaagagcacttacaaatgtaattgcatttacctctctccgaaggca 20983105  T
Q  103 c 103  Q
    |    
T  20983106 c 20983106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37976681 - 37976598
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatt 84  Q
    |||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||| ||||||||||||||||||||||||    
T  37976681 aattttagggtgaggggatggtgccccagttcaaggcaggaaaaaccttcgggctcaaatagcacttacaaaggtatttacatt 37976598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 41910955 - 41910865
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctcc 91  Q
    ||||||| |||||||||||||||||||||| |||| ||| |||||| |||||||||||||| ||||||||||| || ||||||||||||||    
T  41910955 aattttaaggtgaggggatggtgccccagttcaaggcagagaagacattcgggctcaaagaacacttacaaagttaattacatttacctcc 41910865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 31673956 - 31673863
Alignment:
Q  5 ttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||| |||||||||| |||||| |||||| |||||||||| |||| ||||||||    
T  31673956 ttagggtgaggggttggtgccccagtccaaggcagggaggaccttagggctcaaagggcactt-caaagggatttacattttcctctctccaaag 31673863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 39162859 - 39162947
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttaca-aaggtatttacatttacctccctcc 95  Q
    |||||||||| |||| |||||||||||||||| ||  |||||||    ||||||||||||| ||||| ||||||||||||||||||| |||||    
T  39162859 tttagggtgatgggacggtgccccagtccaaggcacagaagacc----ggctcaaagagcatttacacaaggtatttacatttaccttcctcc 39162947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5009418 - 5009515
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||||||| ||||||| ||| ||||| |||| || |||||||||||||  ||||||| || |||||||  |||||||||||| ||| ||||||||    
T  5009418 aattttagggtg-ggggatgatgcaccagttcaaggcatggaagaccttcggattcaaagaacatttacaaaaatatttacatttatctctctccaaag 5009515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38255559 - 38255614
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctc 56  Q
    ||||||| ||||||| |||||||||||||||||| | |||||||||||| ||||||    
T  38255559 aattttaaggtgaggagatggtgccccagtccaaaatagggaagacctttgggctc 38255614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 18303343 - 18303409
Alignment:
Q  33 aagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||| ||| |||||||||||| | |||||||||||||||| |||||||| ||||| | |||||||||    
T  18303343 aagataggaaagaccttcgggtttaaagagcacttacaaaagtatttacgtttactttcctccaaag 18303409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35237060 - 35237102
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaa 43  Q
    |||||||| |||||||||||||||| ||||||||| |||||||    
T  35237060 aattttagagtgaggggatggtgcctcagtccaaggcagggaa 35237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 21968815 - 21968782
Alignment:
Q  57 aaagagcacttacaaaggtatttacatttacctc 90  Q
    |||||||||||||||| |||||||||||||||||    
T  21968815 aaagagcacttacaaaagtatttacatttacctc 21968782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38031322 - 38031257
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcact 66  Q
    ||||||| |||||| | ||| ||||| |||||||||||| |||||||| |||  ||||||||||||    
T  38031322 aattttaaggtgagtgcatgatgccctagtccaagacagagaagacctacggattcaaagagcact 38031257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 46494401 - 46494511
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46494401 ttttagggtgaggggatggtgccccagtccaaggtagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 46494500  T
Q  103 ccggtggggct 113  Q
    |  ||||||||    
T  46494501 ctagtggggct 46494511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 51066622 - 51066522
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  51066622 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattatatttacctccctccaaaggca 51066523  T
Q  103 c 103  Q
    |    
T  51066522 c 51066522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7173586 - 7173688
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  7173586 aattttagggtgaggggatggtgccccagtccaacgcagggaagaccttcgggctcaaagagcacttacaaaggtattgacatttacctccttccaaagg 7173685  T
Q  101 cac 103  Q
    |||    
T  7173686 cac 7173688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29576546 - 29576444
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29576546 aattttagggtgagggggtggtgccccaatccaaggcagggaagaccttcgggctcaaagagcacttacaaagttatttacatttacctccctccaaagg 29576447  T
Q  101 cac 103  Q
    |||    
T  29576446 cac 29576444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 36192672 - 36192560
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  36192672 aattttagggtgaggggatggtgccccagtccaaggtagggaagaccttcgggctcaaagagcatttacaaaagtaattacatttacctccctccaaagg 36192573  T
Q  101 caccggtggggct 113  Q
    |||  ||||||||    
T  36192572 cactagtggggct 36192560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 51713966 - 51714078
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  51713966 aattttagggtgaggggatggtgccccagttcaaagcagggaagaccttcgggctcaaagagcacttacaaaggtatttatatttacctcccttcaaagg 51714065  T
Q  101 caccggtggggct 113  Q
    |||  ||||||||    
T  51714066 cactagtggggct 51714078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30970385 - 30970487
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30970385 aattttagggtgaggggatggtgccccagtctaaggtagggaagaccttcgagctcaaagagcacttacaaaggtatttacatttacctcccttcaaagg 30970484  T
Q  101 cac 103  Q
    |||    
T  30970485 cac 30970487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 55231818 - 55231716
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  55231818 aattttagggtgaggggatggtgccccagtccaaggcagggaagacattcaggctcaaagagcacttacaaaagtatttacatttacctcccttcaaagg 55231719  T
Q  101 cac 103  Q
    |||    
T  55231718 cac 55231716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 32139292 - 32139197
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  32139292 tttagggtgaagggatggtgccccagtccaaggcagagaagaccttcaggctcaaagaacacttacaaaggtaattacatttacctccctccaaag 32139197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 41523526 - 41523430
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||| ||| ||||||||| |||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  41523526 ttttaggatgaagggatggtgtcccaatccaagatagggaagaccttcgagctcaaagagcacttataaaggtatttacatttacctccctccaaag 41523430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2570332 - 2570229
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||| || ||| || | |||||| |||||||||||||||||||    
T  2570332 aattttagggtgaggggatggtgccccagtccaaggcagggaagatcttcggactcaaagaacatttataatgatatttatatttacctccctccaaagg 2570233  T
Q  101 cacc 104  Q
    ||||    
T  2570232 cacc 2570229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22304092 - 22304175
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatt 84  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22304092 aattttagggtgagaggatggtgccccagtccaaggtagggaagaccttcgggctcaaagagcacttacaaaggtattgacatt 22304175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39863779 - 39863881
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||| ||| | |||||||||  || ||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||    
T  39863779 aattttagggtgaggggatagtgtctcagtccaaggtagagaagaccttcgggttcaaagagcacttacaaaggtaattacatttacttccctccaaagg 39863878  T
Q  101 cac 103  Q
    |||    
T  39863879 cac 39863881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 676859 - 676766
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctc 94  Q
    ||||||| ||| |||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  676859 aattttaaggtaaggggatggtgttacagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtatttacacttacctccctc 676766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 8740550 - 8740477
Alignment:
Q  30 tccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8740550 tccaaggcatggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 8740477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 50905879 - 50905777
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||  ||||||||||||||| |||| || ||||||||||||| |||||||||||| ||||||| || ||||||||||||| |||||||||    
T  50905879 aattttagggtgaaaggatggtgccccagttcaaggcatggaagaccttcggactcaaagagcacctacaaagataattacatttacctctctccaaagg 50905780  T
Q  101 cac 103  Q
    |||    
T  50905779 cac 50905777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 47626994 - 47627106
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||| |||||||  |||||||||| ||||||||||||||| | |||||||| | ||| | |||||||||||||||||||||| ||||||    
T  47626994 aattttagggtgaggagatggtgttccagtccaaggcagggaagaccttcgagttcaaagagtatttatagaggtatttacatttacctcccttcaaagg 47627093  T
Q  101 caccggtggggct 113  Q
    |||  ||||||||    
T  47627094 cactagtggggct 47627106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 51279035 - 51279127
Alignment:
Q  2 attttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctc 94  Q
    ||||||||||||||||||||||||  | ||||||   ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||    
T  51279035 attttagggtgaggggatggtgccttaatccaaggttgggaagacctttgggctcaaagagcacttacaaaagtatttacattgacctccctc 51279127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4080553 - 4080651
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||| || ||||||||||||| ||| |||||||||| |||||| ||| | ||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  4080553 aattttaaggcgaggggatggtgctccaatccaagacagagaagacattcagactcaaagagcatttacaaatgtaattacatttacctccctccaaag 4080651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 2294719 - 2294813
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||| || |||||      ||| |||||||||||| ||||||||||||    
T  2294719 ttttagggtgaggggatggtgccccagtctaaggcagtgaagactttcgggctcaacgaacactt------gtaattacatttaccttcctccaaaggca 2294812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 22423471 - 22423408
Alignment:
Q  37 cagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||  | |||||| |||||||||| |||||||||||||||||||||||||||    
T  22423471 cagggaagaccttcgaacacaaagaacacttacaaaagtatttacatttacctccctccaaagg 22423408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 50399646 - 50399739
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaa 97  Q
    ||||||||||| ||||| |||||   ||||||  || |||||| ||  |||||||||| ||||||||||||||||||||||||||| |||||||    
T  50399646 tttagggtgagcggatgatgcccttatccaaggtagagaagacatttaggctcaaagaacacttacaaaggtatttacatttaccttcctccaa 50399739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 23084468 - 23084530
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcac 65  Q
    ||||||||||||| |||||| ||||||| ||||  ||||||||||||||| ||||||||||||    
T  23084468 ttttagggtgaggagatggtaccccagttcaaggtagggaagaccttcggactcaaagagcac 23084530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 37990599 - 37990663
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcactta 68  Q
    |||||| |||||| ||||||||||||||||||  |||||||| |||| ||||||||||| |||||    
T  37990599 tttaggatgagggaatggtgccccagtccaaggtagggaagatcttcaggctcaaagagtactta 37990663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 51066283 - 51066240
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagac 46  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  51066283 ttttagggtgaggggatggtgccccagttcaaggcagggaagac 51066240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 28202598 - 28202643
Alignment:
Q  8 gggtgaggggatggtgccccagtccaagacagggaagaccttcggg 53  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||    
T  28202598 gggtgaggggatggtgctccagtctaagacaggaaagaccttcggg 28202643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 40012640 - 40012548
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaa 97  Q
    ||||| ||||| ||| |||| || |||||||   ||||||||||||  | ||||| ||||||| ||||||| ||||||||||||||||||||||    
T  40012640 tttagtgtgagaggacggtgtcctagtccaacgtagggaagaccttatgactcaa-gagcactcacaaagggatttacatttacctccctccaa 40012548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 28202782 - 28202701
Alignment:
Q  6 tagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttac 87  Q
    |||||||||||||||||||  || |  ||| || |||||| |||| |||||| ||| |||||||||| | ||||||||||||    
T  28202782 tagggtgaggggatggtgcatcaattaaaggcaaggaagatcttcaggctcatagaacacttacaaatgcatttacatttac 28202701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 8400986 - 8400884
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8400986 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 8400887  T
Q  101 cac 103  Q
    |||    
T  8400886 cac 8400884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 50823829 - 50823727
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50823829 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 50823730  T
Q  101 cac 103  Q
    |||    
T  50823729 cac 50823727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 50852031 - 50852133
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50852031 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 50852130  T
Q  101 cac 103  Q
    |||    
T  50852131 cac 50852133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7417929 - 7417827
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7417929 aattttagggtgaggggatggtgccccagtccaaggcagtgaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 7417830  T
Q  101 cac 103  Q
    |||    
T  7417829 cac 7417827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35198896 - 35198795
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35198896 aattttagggtgaggggatggtgctccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctgcaaagg 35198797  T
Q  101 ca 102  Q
    ||    
T  35198796 ca 35198795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 55468129 - 55468033
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcggg-ctcaaagagcacttacaaaggtatttacatttacctccctccaaa 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  55468129 ttttagggtgaggggatggtgccccagtccaaggcagagaagaccttcggggctcaaagagcacttacaaaggtatttacatttacctccctccaaa 55468033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 22371730 - 22371832
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  22371730 aattttagggtgaggggatggtgccccagtctaaagcagggaagatcttcgggttcaaagagcacttacaaaggtaattacatttacctccctccaaagg 22371829  T
Q  101 cac 103  Q
    |||    
T  22371830 cac 22371832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22856018 - 22855920
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  22856018 aattttagggtgaggggatggtgctccagtccaaggcagggaagacctttgggcttaaagagcacttacaaaggtaattacatttacctccctccaaag 22855920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 52545452 - 52545350
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||  |||||    
T  52545452 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagactacttacaaaagtatttacatttacctccctttaaagg 52545353  T
Q  101 cac 103  Q
    |||    
T  52545352 cac 52545350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 34824685 - 34824585
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||    
T  34824685 ttttagggtgaggggatggtgccccagtccaaggccgggaagaccttcgggatcaaagagcacttacaaagataattacatttacctcccttcaaaggca 34824586  T
Q  103 c 103  Q
    |    
T  34824585 c 34824585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 43334057 - 43334149
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctcc 95  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  43334057 ttttagggtgaggggatggtaccccagtccaaggcagggaagaccttcgggctcaaatagcacttacaaaagtatttacatttacctccctcc 43334149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 32902062 - 32902168
Alignment:
Q  144 tagtcacctaattctggttacacc-----atgacaaaaatatccataattaaaatttaattccaaatttcaccaaaataaaaccctttcaatcgttctct 238  Q
    ||||||||||||||||||||||||     |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32902062 tagtcacctaattctggttacaccttgaaatgagaaaaatatccataattaaaatttaattcccaatttcaccaaaataaaaccctttcaatcgttctct 32902161  T
Q  239 gcttctc 245  Q
    | |||||    
T  32902162 gattctc 32902168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37330608 - 37330692
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 85  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  37330608 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcggactcaaagagcacttacaaaggtaattacattt 37330692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19872484 - 19872586
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| |||  ||||||| ||||||||||    
T  19872484 aattttaggatgaggggatggtgccccagtccaagacagggaagaccttcggattcaaagagtacttacaaaggtaattaattttaccttcctccaaagg 19872583  T
Q  101 cac 103  Q
    |||    
T  19872584 cac 19872586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30534903 - 30534987
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 85  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  30534903 aattttagggtgaggggatggtaccccagtccaaggcagggaagatcttcgggctcaaagagcacttacaaaggtaattacattt 30534987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29636000 - 29635897
Alignment:
Q  1 aattttagggtgaggggat-ggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||| ||||||| || ||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  29636000 aattttagcgtgagggaattggtgccccactccaaggcagggaagacattcgggcttaaagagcacttacaaaggtaattacatttacctcccttcaaag 29635901  T
Q  100 gcac 103  Q
    ||||    
T  29635900 gcac 29635897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37454745 - 37454829
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacattt 85  Q
    |||||||||||||||||||||||||||| || |||  ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  37454745 aattttagggtgaggggatggtgccccaatctaaggtagggaagaccttcgggctcaaagagcacttacaaaggtaattatattt 37454829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25910667 - 25910738
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaa 72  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||    
T  25910667 aattttagggtgaggggatggtgcctcagtccaaggcagggaagatcttcggactcaaagagcacttacaaa 25910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 42876343 - 42876256
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctcc 91  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||| |||  | |||||||||||||||||||||| ||||||||||||||    
T  42876343 tttagggtgagaggatggtgccctagtccaagatagggaagacattcaagttcaaagagcacttacaaaggtaattacatttacctcc 42876256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 48077978 - 48078044
Alignment:
Q  37 cagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  48077978 cagggaagaccttcaggctcaaagagcacttacaaagatatttacatttaccttcctccaaaggcac 48078044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25589345 - 25589253
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||| |||||||| ||||||| |||||       |||| |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  25589345 aattttagggtgaggggagggtgcccccgtccaaggcaggg-------tcggactcaaagagcacttactaaggtatttacatttacctccttccaaagg 25589253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 30203657 - 30203744
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccct 93  Q
    |||||| ||||||||||||||||||||| ||||||| |||| ||||||| ||||||||| || |||||||||  |||||||||||||||||    
T  30203657 ttttagagtgaggggatggtgccccagttcaagaca-ggaaaaccttcgagctcaaagaacatttacaaagg--tttacatttacctccct 30203744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 50726003 - 50726096
Alignment:
Q  6 tagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||| |||||||||||||| |||||   ||||||||| ||||  |||||| || ||||||||| ||| ||| |||||||| |||||||||    
T  50726003 tagggtgaagggatggtgccccaatccaaagtagggaagactttcgaactcaaaaagaacttacaaaagtaattatatttaccttcctccaaag 50726096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 50786845 - 50786752
Alignment:
Q  6 tagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||| |||||||||||||| |||||   ||||||||| ||||  |||||| || ||||||||| ||| ||| |||||||| |||||||||    
T  50786845 tagggtgaagggatggtgccccaatccaaagtagggaagactttcgaactcaaaaagaacttacaaaagtaattatatttaccttcctccaaag 50786752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 358943 - 358989
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagacc 47  Q
    |||||||||||||||||||||||||  |||| ||||||| |||||||    
T  358943 aattttagggtgaggggatggtgccatagtctaagacagagaagacc 358989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 773708 - 773674
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaag 35  Q
    |||| ||||||||||||||||||||||||||||||    
T  773708 aattctagggtgaggggatggtgccccagtccaag 773674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 31297529 - 31297574
Alignment:
Q  5 ttagggtgaggggatggtgccccagtccaagacagggaagaccttc 50  Q
    |||||||||||| ||||| |||||||||||| || |||||||||||    
T  31297529 ttagggtgagggcatggttccccagtccaaggcaaggaagaccttc 31297574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 38724459 - 38724500
Alignment:
Q  54 ctcaaagagcacttacaaaggtatttacatttacctccctcc 95  Q
    |||||| |||||||||||||| |||||| |||||||||||||    
T  38724459 ctcaaatagcacttacaaagggatttacgtttacctccctcc 38724500  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 39623887 - 39623823
Alignment:
Q  4 tttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcactta 68  Q
    ||||||||||| ||||||| || |||||||||| | ||||||| ||||| |||||| | ||||||    
T  39623887 tttagggtgagaggatggtcccacagtccaagaaaaggaagacattcggactcaaaaaacactta 39623823  T

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Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 17136518 - 17136416
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17136518 aattttagggtgaggggatggtgccccagtccaaggcggggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 17136419  T
Q  101 cac 103  Q
    |||    
T  17136418 cac 17136416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2754052 - 2754153
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2754052 aattttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgagctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 2754151  T
Q  101 ca 102  Q
    ||    
T  2754152 ca 2754153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 45136971 - 45137073
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45136971 aattttagggtgaagggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 45137070  T
Q  101 cac 103  Q
    |||    
T  45137071 cac 45137073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36836330 - 36836433
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36836330 aattttaaggtgaggggatggtgccccagtccaaggcagggaagatcttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 36836429  T
Q  101 cacc 104  Q
    ||||    
T  36836430 cacc 36836433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21638028 - 21637926
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21638028 aattttagggtgaggggatggtgccctagtccaaggcagagaagacctttgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 21637929  T
Q  101 cac 103  Q
    |||    
T  21637928 cac 21637926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36380133 - 36380235
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  36380133 aattttagggtgaggggatggtgcctcagtccaaggtagggaagaccttcgggctcaaagagcacttacaaagggaattacatttacctccctccaaagg 36380232  T
Q  101 cac 103  Q
    |||    
T  36380233 cac 36380235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40156171 - 40156069
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||| |||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40156171 aattttatggtgaggggatggtgccccagttcaaggtagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 40156072  T
Q  101 cac 103  Q
    |||    
T  40156071 cac 40156069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44650524 - 44650422
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44650524 aattttagggtgaggggatggtgccccggtccaaggcagggaagatcttcggactcaaagagcacttacaaaggtaattacatttacctccctccaaagg 44650425  T
Q  101 cac 103  Q
    |||    
T  44650424 cac 44650422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25987662 - 25987765
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaa-gaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  25987662 aattttagggtgaggggatggtgccccagaccaaggcagggaaagaccttcggactcaaagagcacttacaaaggtaattacatttacctccctccaaag 25987761  T
Q  100 gcac 103  Q
    ||||    
T  25987762 gcac 25987765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 6672802 - 6672896
Alignment:
Q  9 ggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  6672802 ggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcgcgtacaaaggtaattacatttacctccctccaaaggcac 6672896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 10745233 - 10745335
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||    
T  10745233 aattttagggtgaggggatggtgccccagtccaaggcagggaataccttcgggttcaaagagcacttacaaagataattacatttacctccctctaaagg 10745332  T
Q  101 cac 103  Q
    |||    
T  10745333 cac 10745335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 558440 - 558542
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||  |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  558440 aattttagggtgaggggatggtgccccattccaaggaagggaagaccttctagctcaaagagcacttacaaaagtaattacatttacctccctccaaagg 558539  T
Q  101 cac 103  Q
    |||    
T  558540 cac 558542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26690285 - 26690183
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||  | |||||| |||||||||||||| ||||||||||||||||||||| |    
T  26690285 aattttagggtgaggggatggtgcctcagtccaaggcagggaagaccttcgaacacaaagatcacttacaaaggtaattacatttacctccctccaaaag 26690186  T
Q  101 cac 103  Q
    |||    
T  26690185 cac 26690183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33066721 - 33066623
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||||| |||||||||||||||||||||||||  || |||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  33066721 aattttaggatgaggggatggtgccccagtccaaggtagagaagaccttcaggctcaaagagcacttacaaagatatttacatttacctctctccaaag 33066623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 30372682 - 30372783
Alignment:
Q  2 attttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggc 101  Q
    ||||||||||||||| ||||| ||||||| |||| || ||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  30372682 attttagggtgagggtatggtaccccagttcaaggcatggaagaccttcgggctcaaagagcactaacaaagatatttacatttacctccttccaaaggc 30372781  T
Q  102 ac 103  Q
    ||    
T  30372782 ac 30372783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2357077 - 2357175
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||| |||| |||||| ||||||||||||||||||||||||||||    
T  2357077 aattttagggtgaggggatggtgccccagtccaaggcatggaagaccttcgaactcaaa-agcatttacaatggtatttacatttacctccctccaaagg 2357175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21487280 - 21487181
Alignment:
Q  1 aattttagggtgagggg-atggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||||| ||||||| |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  21487280 aattttaggatgagggggatggtgccccagtctaaggcagggaagactttcgggctcaaagagcacttacaaaaatatttacatttacctccctccaaag 21487181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3201012 - 3200910
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||| |||| ||||||||||||||| ||| ||| ||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  3201012 aattttagggcgaggagatggtgccccagtctaaggcagagaagatcttcaggctcaaagaacacttacaaaggtaattacatttacctccctccaaagg 3200913  T
Q  101 cac 103  Q
    |||    
T  3200912 cac 3200910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5039551 - 5039449
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||| ||||||||||||||||| ||||||||  |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||| ||| |    
T  5039551 aattttagagtgaggggatggtgccctagtccaaggtagggaagatcttcgggctcaaagagcacttacaaaggtaattacgtttacctccctctaaaag 5039452  T
Q  101 cac 103  Q
    |||    
T  5039451 cac 5039449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7860147 - 7860249
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||| ||||||||| |||| ||||||||| ||| ||| | ||||||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  7860147 aattttagggagaggggatgatgcctcagtccaaggcagagaaaatcttcgggctcaaagaacacttacaaatgtatgtacatttacctccctccaaagg 7860246  T
Q  101 cac 103  Q
    |||    
T  7860247 cac 7860249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13047157 - 13047252
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||   |||||| ||| ||||||||||||||||||    
T  13047157 aattttagggtgaggggatggtgctccagtccaaggcagggaagatctttgggctcaaagagcactt---aaggtaattatatttacctccctccaaag 13047252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 4553561 - 4553657
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctc-cctccaaa 98  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||| ||| ||||||||| ||||||||| ||||||| ||||||||| ||||||||    
T  4553561 ttttagagtgaggggatggtgccccagtctaagacagagaagacctccggactcaaagagtacttacaaatgtatttatatttacctctcctccaaa 4553657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2098827 - 2098875
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagacctt 49  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2098827 aattttagggtgaggggatggtgccccagtccaaggcagggaagacctt 2098875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 30477240 - 30477280
Alignment:
Q  54 ctcaaagagcacttacaaaggtatttacatttacctccctc 94  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  30477240 ctcaaagagaacttacaaaggtatttagatttacctccctc 30477280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 20961551 - 20961510
Alignment:
Q  62 gcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    ||||||||||| | |||||||||||||||||||||| |||||    
T  20961551 gcacttacaaatggatttacatttacctccctccaagggcac 20961510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 30054445 - 30054545
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  30054445 ttttagggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcatttacaaaggtaattacatttacctccctccaaaggca 30054544  T
Q  103 c 103  Q
    |    
T  30054545 c 30054545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 30370061 - 30370173
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  30370061 aattttaaggtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaaga 30370160  T
Q  101 caccggtggggct 113  Q
    |||  ||||||||    
T  30370161 cactagtggggct 30370173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45324137 - 45324021
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  45324137 aattttagggtgaggggatggtgccccagtccaaagcagggaagaccttcgggctcaaggagcacttacaaaggtatttacatttacctccctccaaaag 45324038  T
Q  101 caccggtggggctggaa 117  Q
    |||  | ||||||||||    
T  45324037 cactagcggggctggaa 45324021  T

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Target: chr1; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22024234 - 22024132
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22024234 aattttagggtgaggggatggtgccccagtccaaggcagagaagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccatccaaagg 22024135  T
Q  101 cac 103  Q
    |||    
T  22024134 cac 22024132  T

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Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 14498080 - 14498183
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  14498080 aattttagggtgaggggatggcgccccagtccaaggcagggaagacctttggtctcaaagagcacttacaaaggtaattacatttacctccctccaaagg 14498179  T
Q  101 cacc 104  Q
    ||||    
T  14498180 cacc 14498183  T

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Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4573510 - 4573412
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4573510 aattttagggtgaggggatagtgcctcagtccaaaacagggaagaccttcgagctcaaagagcacttacaaaggtatttacatttacctccctccaaag 4573412  T

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Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 21090244 - 21090144
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  21090244 ttttagagtgaggggatggtgccccagtccaaggcagggaagaccttcgggctcaaagagcatttacaaatgtatttacatttacctccctccaacggca 21090145  T
Q  103 c 103  Q
    |    
T  21090144 c 21090144  T

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Target: chr1; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12025312 - 12025210
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||| ||||||||||    
T  12025312 aattttagggtgagggggtggtgccccagtccaaggcagggaagaccttcgggctcaaatagtacttacaaaggtaattacatttaccttcctccaaagg 12025213  T
Q  101 cac 103  Q
    |||    
T  12025212 cac 12025210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30850841 - 30850939
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaag 99  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| | ||| ||||||||||||||||||    
T  30850841 aattttagggtgaggggatggtgccccagtccaagacaggaaagaccttcgggttcaaagagcacttacaaaggcaattatatttacctccctccaaag 30850939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 20014589 - 20014490
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  20014589 aattttagggtgaggggatggtgcctcagtccaaggcagggaagaccttcaggctcaaagagcatttacaaatgtaattacatttacctccctccaaagg 20014490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 35371754 - 35371833
Alignment:
Q  9 ggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacc 88  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  35371754 ggtgaggggatggtgccccagtccaaggcagggaagaacttcgggctcaaagagcacttacaaaggtaattacatttacc 35371833  T

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Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33762541 - 33762643
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||| |||||||||||||| ||||||| || |||||||||||| | |||||||||||||| |||||||| |||||||| |||||    
T  33762541 aattttagggtgaggggatgatgccccagtccaaggcagggaaaactttcgggctcaaaaaacacttacaaaggtaattacatttgcctccctctaaagg 33762640  T
Q  101 cac 103  Q
    |||    
T  33762641 cac 33762643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33763255 - 33763357
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaagg 100  Q
    |||||||||||||||||||| ||||||||| |||| ||||||| || |||||||||||| | |||||||||||||| |||||||| |||||||| |||||    
T  33763255 aattttagggtgaggggatgatgccccagttcaaggcagggaaaactttcgggctcaaaaaacacttacaaaggtaattacatttgcctccctctaaagg 33763354  T
Q  101 cac 103  Q
    |||    
T  33763355 cac 33763357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 35618104 - 35618034
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaag 73  Q
    |||||||||||||||||||| |||||||||||  || ||||||||||||||||||||||||||||||||||    
T  35618104 ttttagggtgaggggatggtaccccagtccaaagcaaggaagaccttcgggctcaaagagcacttacaaag 35618034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 44438553 - 44438652
Alignment:
Q  3 ttttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggca 102  Q
    ||||| || ||||||||||| ||||||| |||| |||||||||||||||   | ||||| |||||||||| ||| |||||||||||||||||||||||||    
T  44438553 ttttaaggcgaggggatggtaccccagttcaaggcagggaagaccttcgaatttaaagaacacttacaaaagtaattacatttacctccctccaaaggca 44438652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17015251 - 17015192
Alignment:
Q  1 aattttagggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaag 60  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17015251 aattttaggatgaggggatggtgccccagtccaaagcagggaagaccttcgggctcaaag 17015192  T

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Target: scaffold0021 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 107700 - 107794
Alignment:
Q  9 ggtgaggggatggtgccccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  107700 ggtgaggggatggtgccccagtccaaggcagggtagaccttcgggctcaaagagcacttacaaaggtaattacatttacctccctccaaaggcac 107794  T

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Target: scaffold0691 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 6994 - 7072
Alignment:
Q  25 cccagtccaagacagggaagaccttcgggctcaaagagcacttacaaaggtatttacatttacctccctccaaaggcac 103  Q
    |||||||||||  ||||||||||||||| |||||||| ||||| |||||||| |||||||||| |||||||||| ||||    
T  6994 cccagtccaaggtagggaagaccttcggactcaaagaacacttgcaaaggtaattacatttacttccctccaaacgcac 7072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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