View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9836_high_28 (Length: 242)
Name: NF9836_high_28
Description: NF9836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9836_high_28 |
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Alignment Details
Target: chr6 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 34070463 - 34070603
Alignment:
| Q |
19 |
aaggtatccttctttgcacttagattccaagttccaaccaatattcattaatctaaaagaaaatcattgtctcccnnnnnnnntcatatgcatgctctan |
118 |
Q |
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| T |
34070463 |
aaggtatccttctttgcacttagattccaagttccaaccaatattcattaatctaaaagaaaatcattgtctcccaaaaaaaatcatatgcatgctctat |
34070562 |
T |
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| Q |
119 |
nnnnnngatcatcttctcccaaaaaacacatgtatgtcagc |
159 |
Q |
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|||||||||||||||||||| |||||||||||||| |
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| T |
34070563 |
ttttttgatcatcttctcccaaaaaaaacatgtatgtcagc |
34070603 |
T |
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