View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9836_low_50 (Length: 265)
Name: NF9836_low_50
Description: NF9836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9836_low_50 |
 | |
|
| [»] scaffold0084 (1 HSPs) |
| | |
|
| [»] scaffold0116 (1 HSPs) |
| | |
|
| [»] scaffold0022 (2 HSPs) |
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| [»] scaffold1747 (1 HSPs) |
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| [»] scaffold1745 (1 HSPs) |
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| [»] scaffold0025 (1 HSPs) |
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| [»] scaffold0210 (1 HSPs) |
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| [»] scaffold0859 (1 HSPs) |
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| [»] scaffold0205 (1 HSPs) |
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| [»] scaffold0471 (1 HSPs) |
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| [»] scaffold0275 (1 HSPs) |
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| [»] scaffold0163 (1 HSPs) |
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| [»] scaffold1657 (1 HSPs) |
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| [»] scaffold1359 (1 HSPs) |
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| [»] scaffold0081 (1 HSPs) |
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| [»] scaffold0045 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0315 (1 HSPs) |
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| [»] scaffold0273 (1 HSPs) |
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| [»] scaffold0028 (1 HSPs) |
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| [»] scaffold0023 (1 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0249 (1 HSPs) |
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| [»] scaffold0004 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 21284272 - 21284519
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatattaaacggtagatagtagaatatatttcttac |
104 |
Q |
| |
|
||||||| |||||| ||||| |||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21284272 |
cttaggaaaaaacggagaaaaagtaaacacaattcaaccccccttcttgtgtttttctcaccttcatattaaacagtagatagtagaatatatttcttac |
21284371 |
T |
|
| Q |
105 |
ctatattttttaaggcacgataaaaatctagccaaacacataagttaatcatataacatttcaacctttatagataaaagcagtaatgaaagatggacat |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
21284372 |
ctatattttttaaggcacgataaaaatctagccaaacacattaagtaatcatataacattacaacctttattgataaaagcagtaatgaaagatggacat |
21284471 |
T |
|
| Q |
205 |
tcaaaaaataaattatacatgtattcatagaaatataattactcaaca |
252 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21284472 |
tcaaaaaataaattatacatatattcatagaaatataattactcaaca |
21284519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 13259341 - 13259411
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatta |
75 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||| |
|
|
| T |
13259341 |
cttaggagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcatatta |
13259411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 2499288 - 2499220
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatat |
73 |
Q |
| |
|
|||||||||||| ||||||| ||| ||||||||||||| | ||||||||| |||||||||||||||||| |
|
|
| T |
2499288 |
cttaggagaaaatgaagaaaaagttaacacaattcaatcccccttcttgtgtttttctcaccttcatat |
2499220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11792134 - 11792062
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatat |
73 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| | ||||||||| |||||||||||||||||| |
|
|
| T |
11792134 |
tcaacttaggagaaaacgaagaaaaagataacacaattcaaccccccttcttgtgtttttctcaccttcatat |
11792062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 13261573 - 13261643
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatta |
75 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| | ||||||||| ||||||||||||| |||||| |
|
|
| T |
13261573 |
cttaggagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcacctttatatta |
13261643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 4493804 - 4493735
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatt |
74 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
4493804 |
cttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcatatt |
4493735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 33604164 - 33604099
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
33604164 |
cttaggagaaaacgaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca |
33604099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 33692621 - 33692686
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| ||| |||||||||||| || |||| |||| ||||||||||||||| |
|
|
| T |
33692621 |
cttaggagaaaaggaagaaaaagttaacacaattcaactcccctttttgtgtttttctcaccttca |
33692686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 30025194 - 30025128
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
30025194 |
cttaggagaaaacgaagaaaaagcaaacacaattcaacccccccttcttgtgtttttctcaccttca |
30025128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 10884068 - 10884133
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||||| |||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
10884068 |
cttaggagaaaacaaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca |
10884133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 13027849 - 13027914
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
13027849 |
cttaggagaaaatgaagaaaaagcaaacacaattcaacctcccttcttgtgtttttctcaccttca |
13027914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 14186944 - 14186880
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
14186944 |
taggagaaaaagaagaaaaagtaaacacaattcaacccccccttcttgtgtttttctcaccttca |
14186880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41843320 - 41843384
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttc |
69 |
Q |
| |
|
|||| ||||||||||||||| || |||||||||||| || | ||||| |||||||||||||||| |
|
|
| T |
41843320 |
cttaagagaaaacgaagaaaaaggtaacacaattcaactccctttcttatatttttctcaccttc |
41843384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 14424566 - 14424531
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaa |
41 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14424566 |
ttaggagaaaacgaagaaaaagtaaacacaattcaa |
14424531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 24883256 - 24883310
Alignment:
| Q |
20 |
agaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatt |
74 |
Q |
| |
|
||||| || ||||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
24883256 |
agaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcatatt |
24883310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 1292312 - 1292247
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| || |||||||||||| || ||||||||| ||||||||||||||| |
|
|
| T |
1292312 |
ttaggagaaaaagaagaaaaagctaacacaattcaacctccccttcttgtgtttttctcaccttca |
1292247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 12367655 - 12367720
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | || |||||| ||||||||| ||||| |
|
|
| T |
12367655 |
cttaggagaaaacgaagaaaaagataacacaattcaaccccccgtcttgtgtttttctcaacttca |
12367720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 14746532 - 14746585
Alignment:
| Q |
20 |
agaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatat |
73 |
Q |
| |
|
||||| || ||||||||||||| | ||||||||| |||||||||||||||||| |
|
|
| T |
14746532 |
agaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcatat |
14746585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 16557508 - 16557573
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||| || ||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
16557508 |
cttaggagataaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca |
16557573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 16608154 - 16608089
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||| || ||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
16608154 |
cttaggagataaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca |
16608089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 13902553 - 13902617
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||||||||||||||||| || |||||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
13902553 |
taggagaaaacgaagaaaaagctaacacaattcaacctcccttcttgtgtttttctccccttcat |
13902617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 16315435 - 16315503
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
16315435 |
cttaggagaaaacgaagaaaaacctaacacaattcaacccctccttcttgtgtttttctcaccgtcata |
16315503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 19237962 - 19238022
Alignment:
| Q |
10 |
gagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||| ||||||| || ||||||||||||| | ||||||| | ||||||||||||||| |
|
|
| T |
19237962 |
gagaaaatgaagaaaaagaaaacacaattcaaccccccttcttttgtttttctcaccttca |
19238022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 41122520 - 41122586
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatat |
73 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
41122520 |
taggagaaaacgaagaaaaagtaaacacaattcaaccctccttcttgtgtttttctcaccttcatat |
41122586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 21538027 - 21538093
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||| ||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21538027 |
cttaagagaaaacgaagaaaaagcaaacacaattcaatcttccttcttgtatttttctcaccttcat |
21538093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 24851512 - 24851577
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
24851512 |
cttaggagaaaacgaagaaaaagcaaacacaattcaaccctccttcttgtgtttttctcaccttca |
24851577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 39038480 - 39038546
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
39038480 |
cttaggagaaaacgaagaaaaagctaacacaattcaactccccttcttgtttttttctcaccttcat |
39038546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 20569589 - 20569652
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcacctt |
68 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||| | ||||||||| ||||||||||||| |
|
|
| T |
20569589 |
cttaggagaaaacgaagaaaaagttaacacaattcaaccccccttcttgtgtttttctcacctt |
20569652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 17964143 - 17964208
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||| | ||||||| | ||||||||||||||| |
|
|
| T |
17964143 |
cttaggagaaaacgaagaaaaagttaacacaattcaaccccccttcttttgtttttctcaccttca |
17964208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 28702064 - 28702129
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
28702064 |
cttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca |
28702129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 40780569 - 40780504
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
40780569 |
cttaggagaaaacgaagaaaaaactaacacaattcaaccctccttcttgtgtttttctcaccttca |
40780504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 45087837 - 45087902
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
45087837 |
cttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca |
45087902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 13964823 - 13964889
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctcc-ttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| | ||||||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
13964823 |
cttaggagaaaaagaagaaaaaacaaacacaattcaactcttcattcttgtatttttctcaccttca |
13964889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 24376378 - 24376310
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||||||||||||||||| | | |||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
24376378 |
cttaggagaaaacgaagaaaaacttaacacaattcaacccccccttcttgtgtttttctcaccttcata |
24376310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 19539706 - 19539643
Alignment:
| Q |
11 |
agaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatt |
74 |
Q |
| |
|
|||||| ||||||| || |||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
19539706 |
agaaaatgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcatatt |
19539643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 31328815 - 31328878
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
31328815 |
taggagaaaaagaagaaaaaacaaacacaattcaaccccccttcttgtgtttttctcaccttca |
31328878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 31335536 - 31335599
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
31335536 |
taggagaaaaagaagaaaaaacaaacacaattcaaccccccttcttgtgtttttctcaccttca |
31335599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 22455799 - 22455865
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
22455799 |
cttaggagaaaacgaagaaaaagctaacacaattcaacccccccttcttgtgtttttctcaccttca |
22455865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 25828414 - 25828352
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcacct |
67 |
Q |
| |
|
|||||||||||||||||||| || |||| ||||||| | ||||||||| |||||||||||| |
|
|
| T |
25828414 |
cttaggagaaaacgaagaaaaagctaacataattcaaccccccttcttgtgtttttctcacct |
25828352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 9851517 - 9851468
Alignment:
| Q |
21 |
gaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||| |||||| || ||||| |
|
|
| T |
9851517 |
gaaagagtcaacacaattcaactctccttcttgtgtttttcccatcttca |
9851468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 24450299 - 24450356
Alignment:
| Q |
13 |
aaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||| ||||||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
24450299 |
aaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca |
24450356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 28551765 - 28551826
Alignment:
| Q |
10 |
gagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
||||||| ||||||| || |||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
28551765 |
gagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcat |
28551826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 1041578 - 1041526
Alignment:
| Q |
20 |
agaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
||||| || ||||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
1041578 |
agaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcata |
1041526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 28732703 - 28732755
Alignment:
| Q |
20 |
agaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
||||| || ||||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
28732703 |
agaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcata |
28732755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 24628748 - 24628814
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattc-tccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
24628748 |
cttaggagaaaacgaagaaaaagctaacacaattcaactcctccttcttgtatttttctcaccttca |
24628814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 41115665 - 41115728
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
41115665 |
taggagaaaacgaagaaaaagttaacacaattcaaacccccttcttgtgtttttctcaccttca |
41115728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 11914927 - 11914864
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
11914927 |
taggagaaaacgaagaaaaagttaacacaattcaatcccccttctttagtttttctcaccttca |
11914864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 12600013 - 12599948
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| | ||||||| | |||||||||| |||| |
|
|
| T |
12600013 |
cttaggagaaaacgaagaaaaagctaacacaattcaatcccccttcttatgtttttctcacattca |
12599948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 54679119 - 54679058
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcacc |
66 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
54679119 |
cttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcacc |
54679058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 15560527 - 15560463
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| |||||| || ||||||||||||| | ||||||||| ||||| ||||||||| |
|
|
| T |
15560527 |
ttaggagaaaacaaagaaaaagcaaacacaattcaaccccccttcttgtgtttttttcaccttca |
15560463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 19611224 - 19611288
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
19611224 |
ttaggagaaaacgaagaaaaaactaacacaattcaaccccccttcttgtgtttttctcaccttca |
19611288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 23749784 - 23749715
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaat----tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| || ||||||||| ||||||||||||||| |
|
|
| T |
23749784 |
cttaggagaaaacgaagaaaaagctaacacaattcaatcccctccccttcttgtgtttttctcaccttca |
23749715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17788890 - 17788957
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctc-cttcttgtatttttctcaccttcatat |
73 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||| || | |||||||| ||||| |||||||||||| |
|
|
| T |
17788890 |
taggagaaaacgaagaaaaaacaaacacaattcaactcccacttcttgtgtttttttcaccttcatat |
17788957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 40859963 - 40859900
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||| ||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
40859963 |
taggagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca |
40859900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 14605757 - 14605823
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
14605757 |
cttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttgtgtttttctcaccttca |
14605823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15134981 - 15134915
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcacct |
67 |
Q |
| |
|
|||||||| ||||||||||||||| | |||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
15134981 |
tcaacttaagagaaaacgaagaaataactaacacaattcaaccccccttcttgtgtttttctcacct |
15134915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 45832678 - 45832616
Alignment:
| Q |
11 |
agaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||| ||||||| ||| ||||| |||||| || ||||||||||||||||||||||||||| |
|
|
| T |
45832678 |
agaaaaagaagaaaaagtcaacactattcaacctccccttcttgtatttttctcaccttcata |
45832616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 22089534 - 22089478
Alignment:
| Q |
13 |
aaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||| |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
22089534 |
aaaacgaagaaaaagttaacacaattcaaccc-ccttcttgtgtttttctcaccttca |
22089478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 37986465 - 37986532
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaat---tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
37986465 |
ttaggagaaaacgaagaaaaaactaacacaattcaacccctctccttcttgtatttttctcactttca |
37986532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 13890070 - 13890026
Alignment:
| Q |
30 |
aacacaattcaattctccttcttgtatttttctcaccttcatatt |
74 |
Q |
| |
|
|||||||||||| | ||||||| ||||||||||||||||||||| |
|
|
| T |
13890070 |
aacacaattcaaccccccttcttttatttttctcaccttcatatt |
13890026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36470179 - 36470139
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaa |
41 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
36470179 |
tcaacttaggagaaaacgaagaaaaagataacacaattcaa |
36470139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 22465631 - 22465696
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||| ||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
22465631 |
cttaggagtaaacgaataaaaagtaaacacaattcaaccccccttcttgtatttttctcaccttca |
22465696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 12283654 - 12283585
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatta |
75 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
12283654 |
cttaggagaaaacgaagaaaaagctaacacaattcaaca-tccttcttgtgtttttctcaccttcatatta |
12283585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 12625367 - 12625431
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||||||||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
12625367 |
taggagaaaacgaagaaaaaactaacacaattcaaccctccttcttgtgtttttctcaccttcat |
12625431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 14388954 - 14389005
Alignment:
| Q |
20 |
agaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
||||| || ||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
14388954 |
agaaaaagaaaacacaattcaactctccttcttgtgtttttctcaccttcat |
14389005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 7309050 - 7308984
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
7309050 |
ttaggagaaaacgaagaaaaaaccaacacaattcaaccccccttcttgtgtttttctcaccttcata |
7308984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 22428157 - 22428193
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa |
41 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22428157 |
cttaggagaaaacgaagaaaaagtaaacacaattcaa |
22428193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 33257187 - 33257247
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcac |
65 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||| || ||||||||| |||||||||| |
|
|
| T |
33257187 |
cttaggagaaagcgaagaaaaagctaacacaattcaactccccttcttgtgtttttctcac |
33257247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 33277359 - 33277419
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcac |
65 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||| || ||||||||| |||||||||| |
|
|
| T |
33277359 |
cttaggagaaagcgaagaaaaagctaacacaattcaactccccttcttgtgtttttctcac |
33277419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 22153083 - 22153021
Alignment:
| Q |
8 |
aggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||| ||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
22153083 |
aggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca |
22153021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 30892325 - 30892259
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
||||| ||||| |||||||| || |||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
30892325 |
cttagaagaaatcgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcat |
30892259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 27858038 - 27857981
Alignment:
| Q |
13 |
aaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||| ||||||| || |||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
27858038 |
aaaaagaagaaaaagctaacacaattcaaccctccttcttgtgtttttctcaccttca |
27857981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 9346014 - 9345974
Alignment:
| Q |
30 |
aacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
9346014 |
aacacaattcaaccctccttcttgtgtttttctcaccttca |
9345974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 19037215 - 19037163
Alignment:
| Q |
20 |
agaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
||||| || ||||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
19037215 |
agaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcata |
19037163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 21983857 - 21983793
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctcc-ttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||| ||||||| || ||||||||||||| | || ||||||| ||||||||||||||| |
|
|
| T |
21983857 |
taggagaaaaagaagaaaaagaaaacacaattcaaccccccgttcttgtgtttttctcaccttca |
21983793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 22202701 - 22202764
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||||||||||| || |||||||||||| | ||| ||||| ||||||||||||||| |
|
|
| T |
22202701 |
ttaggagaaaacgaagaaaaagataacacaattcaa-ccccctccttgtgtttttctcaccttca |
22202764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 32786754 - 32786822
Alignment:
| Q |
2 |
caacttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||||||| ||| ||| | |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
32786754 |
caacttaggagaaaaagaaaaaaaatctaacacaattcaaccccccttcttgtgtttttctcaccttca |
32786822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 48571071 - 48571135
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| | | |||||||||||| | | ||||||| ||||||||||||||| |
|
|
| T |
48571071 |
ttaggagaaaaagaagaaaaaatcaacacaattcaacccccattcttgtgtttttctcaccttca |
48571135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 51657276 - 51657328
Alignment:
| Q |
20 |
agaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
||||| || ||||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
51657276 |
agaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcata |
51657328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 2560447 - 2560383
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttc |
69 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||| | ||||||||| |||||||||||||| |
|
|
| T |
2560447 |
cttaggagaagacgaagaaaaagtaaacacaattcaaccccccttcttgtgtttttctcaccttc |
2560383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14393886 - 14393958
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
14393886 |
tcaacttaggagaaaacgaagaaaaagctaacacaattcaacgcccccttcttgtatttttctcaccttcata |
14393958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46350732 - 46350802
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaattctc-cttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||| ||||||| ||| ||||||||||||| ||| |||||||| |||||||||||||| |
|
|
| T |
46350732 |
tcaacttaggagaaaaagaagaaaaagtcaacacaattcaatcctctcttcttgtgattttctcaccttca |
46350802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 12727131 - 12727196
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||| ||| || |||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
12727131 |
cttaggagaaaacgaaaaaaaagctaacacaattcaaccctccttcttgtgtttttctcaccttca |
12727196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 12963984 - 12964046
Alignment:
| Q |
8 |
aggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||| ||||||| || |||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
12963984 |
aggagaaaatgaagaaaaagctaacacaattcaaccctccttcttgtgtttttctcaccttca |
12964046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 14954672 - 14954607
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
14954672 |
cttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca |
14954607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 19889834 - 19889899
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||| ||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
19889834 |
cttaggagaaaacgaagaaaaagctaacaaaattcaaccccccttcttgtgtttttctcaccttca |
19889899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 6252658 - 6252602
Alignment:
| Q |
19 |
aagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatta |
75 |
Q |
| |
|
|||||| || || |||||||||| |||||||||||| ||||| |||||||||||||| |
|
|
| T |
6252658 |
aagaaaaagaaaccacaattcaactctccttcttgtgtttttgtcaccttcatatta |
6252602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 12967574 - 12967511
Alignment:
| Q |
8 |
aggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||||||||| || |||||||||||| | | ||||||||| ||||||||||||||| |
|
|
| T |
12967574 |
aggagaaaacgaagaaaaagctaacacaattcaactcccccttcttgtgtttttctcaccttca |
12967511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 14310940 - 14310877
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
14310940 |
taggagaaaacgaagaaaaataaaacacaattcaacctcccttcttgtatttttgtcaccttca |
14310877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 6089990 - 6089925
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||||||| |||| || |||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
6089990 |
cttaggagaaaacgatgaaaaagctaacacaattcaacctcccttcttgtgtttttctcaccttca |
6089925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 15902457 - 15902393
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
15902457 |
cttaggagaaaaagaagaaaaagctaacacaattcaaccc-ccttcttgtgtttttctcaccttca |
15902393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 19885973 - 19886038
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||| ||||| | |||| |||| ||||||||||||||| |
|
|
| T |
19885973 |
cttaggagaaaacgaagaaaaagataacacatttcaacccccctttttgtgtttttctcaccttca |
19886038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 21640096 - 21640035
Alignment:
| Q |
10 |
gagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||| ||||||| |||||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
21640096 |
gagaaaaagaagaaaaagtaaacacaattcaacccccccttcttgtgtttttctcaccttca |
21640035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 28581357 - 28581292
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || |||||||||||| | | ||||||| ||||||||||||||| |
|
|
| T |
28581357 |
cttaggagaaaaagaagaaaaagctaacacaattcaacccccattcttgtgtttttctcaccttca |
28581292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 29854672 - 29854607
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| || |||||||||||| || ||||||||| ||||||||||||||| |
|
|
| T |
29854672 |
ttaggagaaaaagaagaaaaagctaacacaattcaacctccccttcttgtgtttttctcaccttca |
29854607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 52919686 - 52919618
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatt |
74 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
52919686 |
cttaggagaaaacgaagaaaaaactaacacaattcagccc-ccttcttgtgtttttctcaccttcatatt |
52919618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 15663528 - 15663572
Alignment:
| Q |
29 |
aaacacaattcaattctccttcttgtatttttctcaccttcatat |
73 |
Q |
| |
|
||||||||||||| | ||||||||| |||||||||||||||||| |
|
|
| T |
15663528 |
aaacacaattcaaccccccttcttgtgtttttctcaccttcatat |
15663572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20645420 - 20645360
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtattttt |
60 |
Q |
| |
|
||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
20645420 |
tcaacttagaagaaaacgaagaaaaagctaacacaattcaacacctccttcttgtattttt |
20645360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 21639177 - 21639237
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcacc |
66 |
Q |
| |
|
||||||||||| ||||||| || |||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
21639177 |
ttaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcacc |
21639237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 46797290 - 46797354
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| | | |||||| ||||| | ||||||||| ||||||||||||||| |
|
|
| T |
46797290 |
ttaggagaaaaagaagaaaaaatcaacacagttcaaccccccttcttgtgtttttctcaccttca |
46797354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 49554405 - 49554473
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatat |
73 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||| | ||||| ||| |||||||||||||||||| |
|
|
| T |
49554405 |
cttaggagaaaaagaagaaaaaaccaacacaattcaaccccccttcgtgtgtttttctcaccttcatat |
49554473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 49643659 - 49643727
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| || |||||||| ||||||||| ||||||| |
|
|
| T |
49643659 |
cttaggagaaaacgaagaaaaagctaacacaattcaacctccgcttcttgtgtttttctcatcttcata |
49643727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0084 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 31851 - 31785
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
31851 |
cttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcat |
31785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20383242 - 20383316
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttcatatt |
74 |
Q |
| |
|
|||||||||||||||||||||||| || | |||||||||| |||||||||||| ||||||||||||| ||||| |
|
|
| T |
20383242 |
tcaacttaggagaaaacgaagaaaaagccatcacaattcaacctctccttcttgtgtttttctcacctttatatt |
20383316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 17007565 - 17007500
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
17007565 |
cttaggagaaaacgaagaaaaaacaaacacaattcaaccccccttcttgtgtttttctcaccttca |
17007500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 45539380 - 45539445
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
45539380 |
cttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca |
45539445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 19957235 - 19957299
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| || ||||||||| ||||||||||||||| |
|
|
| T |
19957235 |
taggagaaaacgaagaaaaagctaacacaattcaatctccccttcttgtgtttttctcaccttca |
19957299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 25163326 - 25163260
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||| | |||||||||||||||| |
|
|
| T |
25163326 |
cttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttatgtttttctcaccttcat |
25163260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 30422326 - 30422391
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||| | |||||||| ||||||||||||||| |
|
|
| T |
30422326 |
cttaggagaaaaagaagaaaaagcaaacacaattcaacccctcttcttgtgtttttctcaccttca |
30422391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 13431520 - 13431581
Alignment:
| Q |
11 |
agaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||| ||||||| || |||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
13431520 |
agaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcata |
13431581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 17541385 - 17541450
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
17541385 |
cttaggagaaaatgaagaaaaaactaacacaattcaaccccccttcttgtgtttttctcaccttca |
17541450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 19942491 - 19942426
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||| ||||||| | | ||||| ||||||||||||||||| |
|
|
| T |
19942491 |
cttaggagaaaacgaagaaaaagccaacataattcaacccccattcttatatttttctcaccttca |
19942426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 40846308 - 40846365
Alignment:
| Q |
13 |
aaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||| ||||||| || |||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
40846308 |
aaaaagaagaaaaagctaacacaattcaaccccccttcttgtatttttctcaccttca |
40846365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0116
Description:
Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21780 - 21849
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||| |||||||||||||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
21780 |
tcaacttaaaagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca |
21849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 36691 - 36626
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
36691 |
cttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca |
36626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 134751 - 134686
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
134751 |
cttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca |
134686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 13435145 - 13435080
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||||| |||||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
13435145 |
cttaggagaaaacaaagaaaaagcaaacacaattcaaccccccttcttgtttttttctcaccttca |
13435080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 15301478 - 15301413
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
15301478 |
cttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca |
15301413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 32543522 - 32543458
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| || |||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
32543522 |
ttaggagaaaaagaagaaaaagctaacacaattcaaccctccttcttgtgtttttctcaccttca |
32543458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9717090 - 9717020
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||| ||||||| | ||||||||||||| || ||||||||| ||||||||||||||| |
|
|
| T |
9717090 |
tcaacttaggagaaaaagaagaaaatgcaaacacaattcaacctccccttcttgtgtttttctcaccttca |
9717020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 14101333 - 14101398
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | | ||||||| ||||||||||||||| |
|
|
| T |
14101333 |
cttaggagaaaacgaagaaaaagctaacacaattcaaccccctttcttgtgtttttctcaccttca |
14101398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 19833878 - 19833943
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
||||||||||| || |||| || ||||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
19833878 |
ttaggagaaaaagatgaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcat |
19833943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16528579 - 16528511
Alignment:
| Q |
1 |
tcaacttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcacctt |
68 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| | ||||||||| ||||||||||||| |
|
|
| T |
16528579 |
tcaacttaggagaaaacgaagaaaaagctaacacaattcaacccccccttcttgtgtttttctcacctt |
16528511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 10631397 - 10631330
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctcc-ttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||||||||||| ||||||| || |||||||||||| |||| ||||||| |||||||||||||||| |
|
|
| T |
10631397 |
cttaggagaaaaagaagaaaaagctaacacaattcaaccctccattcttgtgtttttctcaccttcat |
10631330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 16124326 - 16124380
Alignment:
| Q |
20 |
agaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatatt |
74 |
Q |
| |
|
||||| || ||||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
16124326 |
agaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcatatt |
16124380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 19085392 - 19085326
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||| ||||||||||||||| || |||||||||||| | ||||||||| |||||| ||||||||| |
|
|
| T |
19085392 |
cttatgagaaaacgaagaaaaagccaacacaattcaaccccccttcttgtgtttttcacaccttcat |
19085326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 20113523 - 20113559
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa |
41 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| |
|
|
| T |
20113523 |
cttaggagaaaacgaagaaaaagcaaacacaattcaa |
20113559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 21234416 - 21234348
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctcc-ttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||||||||| || |||| || |||||||||||| | || ||||||||||||||||||||||||| |
|
|
| T |
21234416 |
cttaggagaaaaagaggaaaaagctaacacaattcaaccccccattcttgtatttttctcaccttcata |
21234348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 37395427 - 37395362
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||| | ||||||| |||||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
37395427 |
cttaggagaagaagaagaaaaagtaaacacaattcaaccccccttcttgtgtttttctcaccttca |
37395362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 3246339 - 3246403
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
3246339 |
ttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca |
3246403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 22000904 - 22000972
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcatat |
73 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||| | ||||||||| |||||||||||||||||| |
|
|
| T |
22000904 |
cttaggagaaaacgaagaaaaagctaacacaactcaaccccccttcttgtgtttttctcaccttcatat |
22000972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 21076060 - 21076127
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||||||||||||||||| || |||| ||||||| ||||||||||| |||||||||| |||||| |
|
|
| T |
21076060 |
cttaggagaaaacgaagaaaaagctaacataattcaaccctccttcttgtgtttttctcacattcata |
21076127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 21199890 - 21199953
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
21199890 |
taggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca |
21199953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 13546404 - 13546470
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctc-cttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| | | |||||||| ||||||||||||||| |
|
|
| T |
13546404 |
cttagaagaaaacgaagaaaaagtaaacacaattcaacccactcttcttgtgtttttctcaccttca |
13546470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 90311 - 90375
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
90311 |
cttaggagaaaacgaagaaaaagctaacacaattcaa-cctcattcttgtgtttttctcaccttca |
90375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 31487468 - 31487403
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
31487468 |
cttaggagaaaacgaagaaaaaaccaacacaattcaaccccccttcttgtgtttttctcaccttca |
31487403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 6513307 - 6513374
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattc-tccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||| ||||||||||||||| || |||||||||||| | |||||||||| |||||||||||||||| |
|
|
| T |
6513307 |
cttaagagaaaacgaagaaaaagccaacacaattcaacccctccttcttgtgtttttctcaccttcat |
6513374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 7746573 - 7746639
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgt-atttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| | |||| |||| ||||||||||||||| |
|
|
| T |
7746573 |
cttaggagaaaacgaagaaaaagcaaacacaattcaaccccccttattgtgttttttctcaccttca |
7746639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 25097920 - 25097981
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcacctt |
68 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
25097920 |
taggagaaaacgaagaaaaagcaaacataattcaaccacccttcttgtgtttttctcacctt |
25097981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 25157012 - 25157073
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcacctt |
68 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
25157012 |
taggagaaaacgaagaaaaagcaaacataattcaaccacccttcttgtgtttttctcacctt |
25157073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 30742193 - 30742133
Alignment:
| Q |
11 |
agaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||||| ||||||| ||| |||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
30742193 |
agaaaaagaagaaaaagtcaacacaattcaaccc-ccttcttgtgtttttctcaccttcata |
30742133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 35932885 - 35932958
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttca-tattaaac |
78 |
Q |
| |
|
|||||||||| ||||||| || |||||||||||| || ||||||||| ||||||||||||||| |||||||| |
|
|
| T |
35932885 |
taggagaaaaagaagaaaaagctaacacaattcaacctccccttcttgtgtttttctcaccttcagtattaaac |
35932958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 23413853 - 23413913
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctcc-ttcttgtatttttctca |
64 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| || || ||||||| ||||||||| |
|
|
| T |
23413853 |
cttaggagaaaacgaagaaaaagctaacacaattcaactccccattcttgtgtttttctca |
23413913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 31117135 - 31117099
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa |
41 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
31117135 |
cttaggagaaaacgaagaaaaagtaaacactattcaa |
31117099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1747 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1747
Description:
Target: scaffold1747; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 581 - 517
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
581 |
taggagaaaacgaagaaaaagcaaacacaattcaatccccccttcttgtgtttttctcaccttca |
517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1745 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1745
Description:
Target: scaffold1745; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 830 - 894
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
830 |
taggagaaaacgaagaaaaagcaaacacaattcaatccccccttcttgtgtttttctcaccttca |
894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 73791 - 73727
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| | ||||||||| ||||||| | |||||| |
|
|
| T |
73791 |
taggagaaaacgaagaaaaagtaaacaaaattcaatcccccttcttgtgtttttcttagcttcat |
73727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0210 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0210
Description:
Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 883 - 817
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattc-aattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||| || | ||||||||| ||||||||||||||| |
|
|
| T |
883 |
cttaggagaaaacgaagaaaaagttaacacaattcaaaccccccttcttgtgtttttctcaccttca |
817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0859 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0859
Description:
Target: scaffold0859; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 2231 - 2166
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||| | |||||||| ||||||||||||||| |
|
|
| T |
2231 |
cttaggagaaaaagaagaaaaagaaaacacaattcaaccccacttcttgtgtttttctcaccttca |
2166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0205 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0205
Description:
Target: scaffold0205; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 801 - 866
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| ||| |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
801 |
cttaggagaaatagaagaaaaagttaacacaattcaaccccccttcttgtgtttttctcaccttca |
866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0471 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0471
Description:
Target: scaffold0471; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 2715 - 2651
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| || |||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
2715 |
ttaggagaaaatgaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttca |
2651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0275 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0275
Description:
Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 23888 - 23824
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
||||||||||| ||||||| | |||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
23888 |
ttaggagaaaaagaagaaaaaaccaacacaattcaaccctccttcttgtgtttttctcaccttca |
23824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0163 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0163
Description:
Target: scaffold0163; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 25690 - 25654
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa |
41 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |
|
|
| T |
25690 |
cttaggagaaaacgaagaaaaagtaaacacaattcaa |
25654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1657 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1657
Description:
Target: scaffold1657; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 1077 - 1014
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||| | ||||||||| |||| |||||||||| |
|
|
| T |
1077 |
taggagaaaacgaagaaaaatcaaacacaattcaaccccccttcttgtgttttgctcaccttca |
1014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1359 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1359
Description:
Target: scaffold1359; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 56 - 91
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaa |
41 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |
|
|
| T |
56 |
ttaggagaaaacgaagaaaaagtaaacacaattcaa |
91 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0081 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0081
Description:
Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 13254 - 13191
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||| || |||||||||||| | |||| |||| ||||||||||||||| |
|
|
| T |
13254 |
taggagaaaacgaagaaaaagctaacacaattcaacccccctttttgtgtttttctcaccttca |
13191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 88456 - 88515
Alignment:
| Q |
13 |
aaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcata |
72 |
Q |
| |
|
|||| ||||||| ||| |||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
88456 |
aaaaagaagaaaaagttaacacaattcaaccccccttcttgtgtttttctcaccttcata |
88515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 211621 - 211555
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaat-tctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
211621 |
cttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttgtgtttttctcaccttca |
211555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0315 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0315
Description:
Target: scaffold0315; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 7931 - 7866
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | |||||| | ||||||||||||||| |
|
|
| T |
7931 |
cttaggagaaaacgaagaaaaagctaacacaattcaacccctcttcttatgtttttctcaccttca |
7866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0273 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0273
Description:
Target: scaffold0273; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 4950 - 4882
Alignment:
| Q |
7 |
taggagaaaacgaagaaagagtaaacacaattcaattctcc-ttcttgtatttttctcaccttcatatta |
75 |
Q |
| |
|
||||||||||||| ||| ||| |||||||||||| || || ||||||| |||||||||||||||||||| |
|
|
| T |
4950 |
taggagaaaacgacaaaa-agttaacacaattcaactcccccttcttgtgtttttctcaccttcatatta |
4882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 24625 - 24690
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttcat |
71 |
Q |
| |
|
||||||||||| |||||||||| ||||| ||||||| | | ||||| | |||||||||||||||| |
|
|
| T |
24625 |
ttaggagaaaaagaagaaagagcaaacataattcaacccccattcttatgtttttctcaccttcat |
24690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 102817 - 102752
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaa-ttctccttcttgtatttttctcaccttc |
69 |
Q |
| |
|
|||||||||||||||||||| ||| || ||||||||| | ||||||||| |||||||||||||| |
|
|
| T |
102817 |
cttaggagaaaacgaagaaaaagttaatacaattcaacacccccttcttgtgtttttctcaccttc |
102752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 83558 - 83494
Alignment:
| Q |
5 |
cttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
|
|||||||||||| ||||||| || |||||||||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
83558 |
cttaggagaaaaagaagaaaaagctaacacaattcaa-cctcattcttgtgtttttctcaccttca |
83494 |
T |
|
Back To:
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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0249
Description:
Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 18608 - 18672
Alignment:
| Q |
6 |
ttaggagaaaacgaagaaagagtaaacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
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|
| T |
18608 |
ttaggagaaaaagaagcaaaaacaaacataattcaaccctccttcttgtgtttttctcaccttca |
18672 |
T |
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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 245126 - 245166
Alignment:
| Q |
30 |
aacacaattcaattctccttcttgtatttttctcaccttca |
70 |
Q |
| |
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|||| ||||||| || ||||||||||||||||||||||||| |
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|
| T |
245126 |
aacagaattcaactccccttcttgtatttttctcaccttca |
245166 |
T |
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