View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9836_low_57 (Length: 252)
Name: NF9836_low_57
Description: NF9836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9836_low_57 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 10590141 - 10590380
Alignment:
| Q |
13 |
cataggtggttcttactactttattttggcccaataataaattttcttaatgataaaaatggtagcaattcaatcttctatgacactagtctagccattt |
112 |
Q |
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| T |
10590141 |
cataggtggttcttactactttattttggcccaataataaattttcttaatgataaaaatggtagcaattcaatcttctataacactagtctagccattt |
10590240 |
T |
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| Q |
113 |
cttgatttaatttctaacaattggtgcttgtgagccacatgccatggccaaatccatccaatgtttgtgtttttgaaggaaatagtttgctacataattt |
212 |
Q |
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| T |
10590241 |
cttgatttaatttctaacaattggtgcttgtgagccacttgccatggccaaatccatccaatgtttgtgtttttgaaggaaatagtttgctacataattt |
10590340 |
T |
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| Q |
213 |
tgcatttctattattagtcacagcttctgatatgtacaaa |
252 |
Q |
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|||||||||||||||||| | ||||||||||||||||||| |
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| T |
10590341 |
tgcatttctattattagtgatagcttctgatatgtacaaa |
10590380 |
T |
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