View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9836_low_64 (Length: 246)
Name: NF9836_low_64
Description: NF9836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9836_low_64 |
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Alignment Details
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 26787864 - 26788110
Alignment:
| Q |
1 |
tgaaaaatagggtttcagaaaattgaaattagaaattagaa-------taagaatgtggagatgaaacgaaagttacgaacca-ttattggaatcca-tt |
91 |
Q |
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| T |
26787864 |
tgaaaaatagggtttcagaaaattgaaattagaaattagaaattagaataagaatgtggagatgaaacgaaagttacgaaccacttgttggaatccactt |
26787963 |
T |
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| Q |
92 |
ggagtggaatcggaagccatggattggttttgagaaaacgcgggaatggaaaatggaaaatgaagaagtgagtgaggaggacaagagtatgaatgaagat |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
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| T |
26787964 |
ggagtggaatcggaagccatggattggttttgagaaaacgcgcgaatggaaaatggaaa-tgaagaagtgagtgagg---acaagagtatgaatgaagat |
26788059 |
T |
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| Q |
192 |
gtaactgcgagatatggcgcgcaaaaggtacttgttttcccgcctttgctt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26788060 |
gtaactgcgagatatggcgcgcaaaaggtacttgttttcccgccttagctt |
26788110 |
T |
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