View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9837_low_11 (Length: 293)
Name: NF9837_low_11
Description: NF9837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9837_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 288
Target Start/End: Original strand, 32850858 - 32851128
Alignment:
| Q |
18 |
ccaataagttcctccacaaggtttcaagatgctaagcatcttcgccatcactcatgctgacatgactatcgatataaaactccgttgaggaatcaacatc |
117 |
Q |
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| T |
32850858 |
ccaataagttactccacaaggtttcaagatgctaagcatcttcgccatcactcatgctgacatgactatcgatataaaactccgttgaggaatcaacatc |
32850957 |
T |
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| Q |
118 |
gtcaacaatccttcctctgttgtatgtatcaacatatgcaagatatgcacgataagtgttaaacactagatacaatgtgtaactaatttgttttaaccaa |
217 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
32850958 |
gtcaacaatccttcctctgttgtttgtatcaacatatgcaagatatgcacgataagtgttaaacactagatacaatgtgtaactaaattgttttaaccaa |
32851057 |
T |
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| Q |
218 |
gatatagtgactacataatatgaaaataacaaaatacctttcaagaacaaacttcccttccctatgcttct |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |
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| T |
32851058 |
gatatagtgactacataatatgaaaataacaaaatacctttcaagaacaaacttcccttccttatacttct |
32851128 |
T |
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