View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9837_low_4 (Length: 538)

Name: NF9837_low_4
Description: NF9837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9837_low_4
NF9837_low_4
[»] chr4 (16 HSPs)
chr4 (1-366)||(10247065-10247431)
chr4 (363-503)||(10385631-10385775)
chr4 (407-503)||(11702881-11702977)
chr4 (399-493)||(10247523-10247617)
chr4 (415-502)||(23653017-23653104)
chr4 (406-503)||(11560541-11560638)
chr4 (415-503)||(33400626-33400714)
chr4 (399-503)||(18859498-18859603)
chr4 (399-503)||(49640109-49640213)
chr4 (441-503)||(56089608-56089670)
chr4 (399-503)||(3734035-3734139)
chr4 (399-503)||(49636816-49636920)
chr4 (406-503)||(14701634-14701730)
chr4 (399-456)||(17670124-17670181)
chr4 (441-503)||(26703785-26703847)
chr4 (406-503)||(3719790-3719886)
[»] chr6 (20 HSPs)
chr6 (399-503)||(34502063-34502167)
chr6 (403-503)||(2330354-2330454)
chr6 (399-503)||(31262491-31262595)
chr6 (399-503)||(17696309-17696413)
chr6 (400-503)||(7560469-7560572)
chr6 (426-503)||(9314079-9314156)
chr6 (415-503)||(31123166-31123254)
chr6 (441-503)||(33679482-33679544)
chr6 (399-503)||(22920250-22920354)
chr6 (441-503)||(12746568-12746630)
chr6 (399-503)||(14969389-14969492)
chr6 (426-503)||(22464162-22464239)
chr6 (426-503)||(28117587-28117664)
chr6 (399-503)||(17231577-17231680)
chr6 (399-503)||(13095992-13096095)
chr6 (403-500)||(2331017-2331103)
chr6 (399-503)||(3827110-3827214)
chr6 (454-503)||(5618602-5618651)
chr6 (399-503)||(11410487-11410589)
chr6 (441-503)||(28894775-28894837)
[»] chr5 (20 HSPs)
chr5 (399-503)||(34653049-34653153)
chr5 (399-503)||(19685888-19685994)
chr5 (399-503)||(19689271-19689377)
chr5 (399-503)||(2453058-2453157)
chr5 (426-503)||(17944398-17944475)
chr5 (399-503)||(26547813-26547918)
chr5 (399-503)||(26551372-26551477)
chr5 (399-489)||(25185106-25185196)
chr5 (399-503)||(28562653-28562758)
chr5 (399-503)||(28566221-28566326)
chr5 (367-486)||(2453008-2453144)
chr5 (441-503)||(33920904-33920966)
chr5 (399-503)||(4732125-4732230)
chr5 (441-503)||(1810702-1810765)
chr5 (441-503)||(9690525-9690587)
chr5 (465-503)||(3194945-3194983)
chr5 (441-503)||(26337745-26337807)
chr5 (365-403)||(3194868-3194906)
chr5 (1-58)||(1811121-1811178)
chr5 (406-503)||(26726675-26726771)
[»] chr3 (29 HSPs)
chr3 (399-503)||(18882934-18883038)
chr3 (399-503)||(44508529-44508633)
chr3 (399-503)||(9157710-9157813)
chr3 (407-503)||(42354705-42354801)
chr3 (399-498)||(9154537-9154635)
chr3 (399-503)||(10963128-10963232)
chr3 (399-503)||(10966637-10966741)
chr3 (419-503)||(20536870-20536954)
chr3 (399-499)||(10959621-10959721)
chr3 (399-503)||(5887275-5887379)
chr3 (399-503)||(5897259-5897363)
chr3 (441-503)||(4250148-4250210)
chr3 (399-503)||(23375021-23375125)
chr3 (431-503)||(29233879-29233951)
chr3 (399-503)||(2783841-2783946)
chr3 (399-476)||(25888734-25888811)
chr3 (399-503)||(30158325-30158435)
chr3 (441-503)||(19868744-19868807)
chr3 (406-503)||(6173645-6173741)
chr3 (365-403)||(9154485-9154523)
chr3 (415-459)||(18551405-18551449)
chr3 (441-503)||(3305612-3305674)
chr3 (441-503)||(28327206-28327268)
chr3 (441-503)||(28330531-28330593)
chr3 (406-503)||(16314881-16314977)
chr3 (406-503)||(16415047-16415143)
chr3 (406-503)||(18495875-18495971)
chr3 (406-503)||(18516021-18516117)
chr3 (435-475)||(2279939-2279979)
[»] chr2 (20 HSPs)
chr2 (407-503)||(1503727-1503823)
chr2 (407-503)||(1506931-1507027)
chr2 (399-503)||(38326090-38326194)
chr2 (399-503)||(38326565-38326669)
chr2 (416-503)||(4577593-4577677)
chr2 (399-503)||(15704264-15704367)
chr2 (399-503)||(18938616-18938720)
chr2 (402-503)||(18011673-18011775)
chr2 (399-503)||(13518024-13518129)
chr2 (399-503)||(15719518-15719621)
chr2 (399-503)||(11059516-11059624)
chr2 (426-503)||(30719524-30719599)
chr2 (436-503)||(29435509-29435575)
chr2 (365-403)||(38326038-38326076)
chr2 (365-403)||(38326683-38326721)
chr2 (365-403)||(1503843-1503881)
chr2 (365-403)||(1507047-1507085)
chr2 (441-503)||(40678066-40678128)
chr2 (406-503)||(22592243-22592339)
chr2 (367-403)||(4577522-4577558)
[»] chr8 (19 HSPs)
chr8 (399-503)||(30645194-30645298)
chr8 (399-503)||(27863848-27863953)
chr8 (277-356)||(30645011-30645090)
chr8 (399-499)||(14187721-14187822)
chr8 (399-503)||(22653982-22654087)
chr8 (399-503)||(18696220-18696323)
chr8 (399-503)||(20262277-20262380)
chr8 (399-503)||(21048907-21049010)
chr8 (399-503)||(24434753-24434857)
chr8 (441-503)||(5827789-5827851)
chr8 (399-503)||(5963976-5964081)
chr8 (399-503)||(24444799-24444903)
chr8 (399-503)||(31981080-31981173)
chr8 (456-503)||(31984767-31984814)
chr8 (406-503)||(17543779-17543875)
chr8 (432-503)||(24903778-24903848)
chr8 (441-503)||(39660251-39660313)
chr8 (406-503)||(17013326-17013422)
chr8 (435-475)||(452901-452941)
[»] scaffold0214 (3 HSPs)
scaffold0214 (399-503)||(19778-19880)
scaffold0214 (399-503)||(13328-13431)
scaffold0214 (399-503)||(27344-27447)
[»] chr1 (12 HSPs)
chr1 (399-503)||(28918094-28918199)
chr1 (399-503)||(37641587-37641692)
chr1 (399-503)||(16839226-16839330)
chr1 (399-503)||(16849156-16849260)
chr1 (399-503)||(17903081-17903184)
chr1 (406-503)||(20964185-20964281)
chr1 (436-503)||(49716129-49716195)
chr1 (436-503)||(49719612-49719678)
chr1 (441-503)||(23441578-23441640)
chr1 (441-503)||(33898088-33898150)
chr1 (406-503)||(24200537-24200633)
chr1 (435-475)||(20981117-20981157)
[»] scaffold0134 (1 HSPs)
scaffold0134 (426-503)||(6985-7062)
[»] chr7 (22 HSPs)
chr7 (399-503)||(26182023-26182127)
chr7 (399-503)||(20100364-20100468)
chr7 (426-503)||(22083736-22083813)
chr7 (399-503)||(26460187-26460291)
chr7 (399-503)||(5827002-5827106)
chr7 (399-489)||(11825664-11825754)
chr7 (399-503)||(748335-748440)
chr7 (407-503)||(22256985-22257082)
chr7 (402-481)||(2349198-2349277)
chr7 (441-503)||(3541462-3541524)
chr7 (407-503)||(22232921-22233018)
chr7 (407-503)||(22253721-22253818)
chr7 (399-441)||(23467442-23467484)
chr7 (365-403)||(22233044-22233082)
chr7 (365-403)||(22253657-22253695)
chr7 (406-503)||(710311-710407)
chr7 (1-58)||(7569604-7569661)
chr7 (1-58)||(7576019-7576076)
chr7 (425-489)||(8397590-8397654)
chr7 (441-503)||(38431155-38431217)
chr7 (406-503)||(23599056-23599152)
chr7 (443-503)||(44018086-44018146)
[»] scaffold0062 (2 HSPs)
scaffold0062 (399-503)||(53176-53279)
scaffold0062 (399-503)||(68075-68178)
[»] scaffold0067 (1 HSPs)
scaffold0067 (399-503)||(27083-27187)
[»] scaffold0360 (2 HSPs)
scaffold0360 (367-502)||(2151-2287)
scaffold0360 (363-502)||(5973-6113)
[»] scaffold0401 (1 HSPs)
scaffold0401 (441-503)||(4021-4083)
[»] scaffold0043 (1 HSPs)
scaffold0043 (441-503)||(13354-13416)
[»] scaffold0083 (2 HSPs)
scaffold0083 (441-502)||(52881-52942)
scaffold0083 (441-502)||(29084-29145)
[»] scaffold0014 (1 HSPs)
scaffold0014 (456-503)||(227125-227172)
[»] scaffold0012 (2 HSPs)
scaffold0012 (406-503)||(27173-27269)
scaffold0012 (406-503)||(31359-31455)
[»] scaffold0273 (1 HSPs)
scaffold0273 (441-503)||(19979-20041)
[»] scaffold0175 (1 HSPs)
scaffold0175 (406-503)||(28954-29050)


Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 366
Target Start/End: Original strand, 10247065 - 10247431
Alignment:
Q  1 acaaaaacatggttttgtgatggatgtgattggccaagaaaaatgataacatgttgaacgaaagaaaagaagaccactcaatgttgcattagggtgcagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10247065 acaaaaacatggttttgtgatggatgtgattggccaagaaaaatgataacaagttgaacgaaagaaaagaagaccacacaatgttgcattagggtgcagg 10247164  T
Q  101 aatcaaaaccaatataattgggctttctttcatg-acgttgaaccnnnnnnnnnnnnnnnnnnnntaacttgctgcataatgttaatttggaaagaaaaa 199  Q
    |||||||||||||||||||||||||||||||||| ||||||||||                    |||||||||||||||||||||||||||||||||||    
T  10247165 aatcaaaaccaatataattgggctttctttcatggacgttgaaccaagaaaaagaaaagaaaagataacttgctgcataatgttaatttggaaagaaaaa 10247264  T
Q  200 taggtttgacaagctataaaaggagaccacgcacacgaacaaaccagacgattgggaaagaaagagcagcacgcggtacgagacaaaaggagaaggagaa 299  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10247265 taggtttgacaagctataaaaggagaccacgcacaggaacaaagcagacgattgggaaagaaagagcagcacgcggtacgagacaaaaggaggaggagaa 10247364  T
Q  300 aagctcatggaatttggaatatgcaagagtactgattaaatagaacaaagccggtagactataattc 366  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  10247365 aagctcatggaatttggaatatgcaacagtactgattaaatagaacaaagccggtagaccataattc 10247431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 363 - 503
Target Start/End: Original strand, 10385631 - 10385775
Alignment:
Q  363 attcatgtctagctaagtccctttgattgagccatgat----gaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaatta 458  Q
    |||||||||||| ||| || ||||||||||||||||||    |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  10385631 attcatgtctagttaattctctttgattgagccatgatatatgaattagtagttgaaactctctttattatcaatattattcagtctttattcagaatta 10385730  T
Q  459 tttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  10385731 tttgtgttcattgcttttcatatgattgcttgcatgactattaac 10385775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 407 - 503
Target Start/End: Complemental strand, 11702977 - 11702881
Alignment:
Q  407 gtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  11702977 gtagttgaaactctctttattatcaatattattcagtctttattcagaataatttgtgttcattgcttttcatatgattgtttgcatgactattaac 11702881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 399 - 493
Target Start/End: Original strand, 10247523 - 10247617
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcat 493  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||    
T  10247523 atgaatcagtagttaaaactctttttattatcaatattattcagtctttattcagaattatctgtgttcattgcctttcatatgattgtttgcat 10247617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 23653017 - 23653104
Alignment:
Q  415 aactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaa 502  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  23653017 aactctctttattatcaatgttattcaatctttattcagaattatttgtgttcattgcttttattatgattgtttgcatgactattaa 23653104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 406 - 503
Target Start/End: Original strand, 11560541 - 11560638
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| |||||||||||||||||||| |||| || |||||||| | |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  11560541 agtagttgaaactctctttattatcaatgttatacaatctttattcaaaattatttgtgttcattgcttttattatgattgtttgcatgactattaac 11560638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 415 - 503
Target Start/End: Complemental strand, 33400714 - 33400626
Alignment:
Q  415 aactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||| | || |||||||||||||||||||||||| |||||||||||    
T  33400714 aactctctttgttatcaatattattcggtctttattcagaattatttatgttaattgcttttcatatgattgtttgcttgactattaac 33400626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 18859498 - 18859603
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||| ||||||| | |||||||||||||| || ||||||||||||||||| ||||||| |||| |||||||||||||| || |||| |||| ||||||    
T  18859498 atgaattagtagttgatactctctttattattaaaattattcagtctttattcagaattacttgtgttcattgcttttcaaataattgatttgtatgact 18859597  T
Q  498 attaac 503  Q
    ||||||    
T  18859598 attaac 18859603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 49640213 - 49640109
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | |||||||    
T  49640213 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcggatgacta 49640114  T
Q  499 ttaac 503  Q
    |||||    
T  49640113 ttaac 49640109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 56089670 - 56089608
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  56089670 agtctttattcagaattatttgtgttcattgcttttcgtatgattgtttgcatgactattaac 56089608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 3734035 - 3734139
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | || ||||    
T  3734035 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcggataacta 3734134  T
Q  499 ttaac 503  Q
    |||||    
T  3734135 ttaac 3734139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 49636920 - 49636816
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | || ||||    
T  49636920 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcgtataacta 49636821  T
Q  499 ttaac 503  Q
    |||||    
T  49636820 ttaac 49636816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 503
Target Start/End: Original strand, 14701634 - 14701730
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||||| ||||||||  |||  |||||||||||||||||||| ||||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  14701634 agtagttaatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 14701730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 456
Target Start/End: Original strand, 17670124 - 17670181
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaat 456  Q
    |||||| ||||||| | |||||||||||||| ||| |||||||||||||||| |||||    
T  17670124 atgaattagtagttgatactctctttattattaatgttattcagtctttattcagaat 17670181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 26703847 - 26703785
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  26703847 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 26703785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 3719886 - 3719790
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | |||| || ||||  |||||||| |||| ||| ||||||||||||    
T  3719886 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattg-atttcatataattgcttgtatgactattaac 3719790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 5e-45; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 34502063 - 34502167
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  34502063 atgaatcagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcatgacta 34502162  T
Q  499 ttaac 503  Q
    |||||    
T  34502163 ttaac 34502167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 403 - 503
Target Start/End: Original strand, 2330354 - 2330454
Alignment:
Q  403 atcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaa 502  Q
    |||||||||| || |||||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  2330354 atcagtagttgaagctctctttattatcaatattattcagtctttattcataattatttgtgttcattgtttttcatatgattatttgcatgactattaa 2330453  T
Q  503 c 503  Q
    |    
T  2330454 c 2330454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 31262491 - 31262595
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| |||| || |||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  31262491 atgaattagtatttgaaactctctttattatcaattttattcggtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcatgatta 31262590  T
Q  499 ttaac 503  Q
    |||||    
T  31262591 ttaac 31262595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 17696309 - 17696413
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaat-attattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgact 497  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||||    
T  17696309 atgaatcagtagttgaa-ctctctttattatcaatgattattcagtctttatttagaattatttgtgttcatcgcttttcatatgactgtttgtatgact 17696407  T
Q  498 attaac 503  Q
    ||||||    
T  17696408 attaac 17696413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 503
Target Start/End: Complemental strand, 7560572 - 7560469
Alignment:
Q  400 tgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactat 499  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | |||| || ||||| |||||||||||| ||||| ||    
T  7560572 tgaatcagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttatgttcagtgtttttcttatgattgtttgtatgacaat 7560473  T
Q  500 taac 503  Q
    ||||    
T  7560472 taac 7560469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 426 - 503
Target Start/End: Complemental strand, 9314156 - 9314079
Alignment:
Q  426 ttatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||    
T  9314156 ttatcaatataattcagtctttattcagaattatttatgttcattgctttttatatgattgtttgcatgactattaac 9314079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 415 - 503
Target Start/End: Original strand, 31123166 - 31123254
Alignment:
Q  415 aactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||||||||||| |||  |||  |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  31123166 aactctctttattataaatgatatgtagtctttattcagaattatttgttttcattgcttttattatgattgtttgcatgactattaac 31123254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 33679544 - 33679482
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  33679544 agtctttatttagaattatttgtgttcattgcttttcgtatgattgtttgcatgactattaac 33679482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 22920250 - 22920354
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||| ||| |||||||    
T  22920250 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagagttatttgtgttcattgcttttcatataattgcttgtatgacta 22920349  T
Q  499 ttaac 503  Q
    |||||    
T  22920350 ttaac 22920354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 12746568 - 12746630
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  12746568 agtctttattcagaattatttgtgttcattgcttttcgtatgattgtttgcatgactattaac 12746630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 14969389 - 14969492
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||  |||||||||||||| || |||| |||| ||||||    
T  14969389 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttg--ttcattgcttttcagataattgctttgtatgact 14969486  T
Q  498 attaac 503  Q
    ||||||    
T  14969487 attaac 14969492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 426 - 503
Target Start/End: Original strand, 22464162 - 22464239
Alignment:
Q  426 ttatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||  ||||||| |||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||    
T  22464162 ttatcaataaaattcagtttttattcagaattatttatgttcattgctttttatatgattgtttgcatgactattaac 22464239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 426 - 503
Target Start/End: Original strand, 28117587 - 28117664
Alignment:
Q  426 ttatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||| |||||||||||| ||||| |||||||    
T  28117587 ttatcaatataattcagtctttattcagaattatttatgttcattgctttttatatgattgttttcatgattattaac 28117664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 17231577 - 17231680
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||  | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||| |||||||| |||| ||| |||||||    
T  17231577 atgaattagtagtcgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgc-tttcatataattgcttgtatgacta 17231675  T
Q  499 ttaac 503  Q
    |||||    
T  17231676 ttaac 17231680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 13096095 - 13095992
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | |||||||||||||  ||| |||||||||||||||| ||||||| |||| |||||||  |||||||| |||| ||| |||||||    
T  13096095 atgaattagtagttgatactctctttattaataatgttattcagtctttattcagaattacttgtattcattg-atttcatataattgcttgtatgacta 13095997  T
Q  499 ttaac 503  Q
    |||||    
T  13095996 ttaac 13095992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 403 - 500
Target Start/End: Original strand, 2331017 - 2331103
Alignment:
Q  403 atcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactatt 500  Q
    |||||||||| || |||||||||||||||||||||||||            |||||||||| ||||||||||||||||||||||||||||||||||||    
T  2331017 atcagtagttgaagctctctttattatcaatattattcat-----------aattatttgtgttcattgcttttcatatgattgtttgcatgactatt 2331103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 3827214 - 3827110
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||| ||||||| | ||||| |||||||| ||| |||||||||||||||| |||||||||||| || |||| |||| |||| |||| |||| ||||||    
T  3827214 atgaattagtagttgatactct-tttattattaatgttattcagtctttattcagaattatttgtatttattgttttttatataattgctttgtatgact 3827116  T
Q  498 attaac 503  Q
    ||||||    
T  3827115 attaac 3827110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 454 - 503
Target Start/End: Complemental strand, 5618651 - 5618602
Alignment:
Q  454 aattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  5618651 aattatttgtgtttattgcttttcatatgattgtttgcatgactattaac 5618602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 11410487 - 11410589
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | |||||||| ||||  ||| |||||||||||||||| ||||||| |||| | |||||| |||||||| |||| ||| |||||||    
T  11410487 atgaattagtagttgatactctctt-attaataatgttattcagtctttattcagaattacttgtgtccattgc-tttcatataattgcttgtatgacta 11410584  T
Q  499 ttaac 503  Q
    |||||    
T  11410585 ttaac 11410589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 28894837 - 28894775
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  28894837 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 28894775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 34653153 - 34653049
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  34653153 atgaattagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcatgacta 34653054  T
Q  499 ttaac 503  Q
    |||||    
T  34653053 ttaac 34653049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 19685888 - 19685994
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttc--atatgattgtttgcatgac 496  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||    
T  19685888 atgaatcagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatatgattgtttgcatgac 19685987  T
Q  497 tattaac 503  Q
    |||||||    
T  19685988 tattaac 19685994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 19689271 - 19689377
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttc--atatgattgtttgcatgac 496  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||    
T  19689271 atgaatcagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatatgattgtttgcatgac 19689370  T
Q  497 tattaac 503  Q
    |||||||    
T  19689371 tattaac 19689377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 2453058 - 2453157
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    ||||||||    
T  2453058 atgaattagtagttgaaactct-tttattatcaatattattcagtctttattcagaattatttgtattcattgcttttcatatgattg----catgacta 2453152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 426 - 503
Target Start/End: Original strand, 17944398 - 17944475
Alignment:
Q  426 ttatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||    
T  17944398 ttatcaatataattcagtctttattcagaattatttatgttcattgctttttatatgattgtttgcatgactattaac 17944475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 26547813 - 26547918
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||||| || |||| |||| ||||||    
T  26547813 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcagataattgttttgtatgact 26547912  T
Q  498 attaac 503  Q
    ||||||    
T  26547913 attaac 26547918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 26551372 - 26551477
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||||| || |||| |||| ||||||    
T  26551372 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcagataattgttttgtatgact 26551471  T
Q  498 attaac 503  Q
    ||||||    
T  26551472 attaac 26551477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 399 - 489
Target Start/End: Original strand, 25185106 - 25185196
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgttt 489  Q
    |||||||||||||| | ||||||||| |||| ||||||||||| ||||||||||||| || |||| |||||||||||| ||||||||||||    
T  25185106 atgaatcagtagttgatactctctttgttattaatattattcaatctttatttagaaatacttgtgttcattgctttttatatgattgttt 25185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 28562758 - 28562653
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| |  ||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||||| || |||| |||| ||||||    
T  28562758 atgaatcagtagttgatcctctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcagataattgctttgtatgact 28562659  T
Q  498 attaac 503  Q
    ||||||    
T  28562658 attaac 28562653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 28566326 - 28566221
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| |  ||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||||| || |||| |||| ||||||    
T  28566326 atgaatcagtagttgatcctctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcagataattgctttgtatgact 28566227  T
Q  498 attaac 503  Q
    ||||||    
T  28566226 attaac 28566221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 367 - 486
Target Start/End: Original strand, 2453008 - 2453144
Alignment:
Q  367 atgtctagctaagtccctttgattgagccatg------------------atgaatcagtagttaaaactctctttattatcaatattattcagtcttta 448  Q
    |||||||||||| |||||||||||||||||||                  |||||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  2453008 atgtctagctaattccctttgattgagccatgatgaacctattgtaatatatgaattagtagttgaaactct-tttattatcaatattattcagtcttta 2453106  T
Q  449 tttagaattatttgttttcattgcttttcatatgattg 486  Q
    || |||||||||||| ||||||||||||||||||||||    
T  2453107 ttcagaattatttgtattcattgcttttcatatgattg 2453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 33920904 - 33920966
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  33920904 agtctttattcagaattatttgtgttcattgcttttcgtatgattgtttgcatgactattaac 33920966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 4732230 - 4732125
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| |   |||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||| |||| |||| |||| ||||||    
T  4732230 atgaatcagtagttgatcttctctttattattaatcttattcagtctttattcagaattacttgtgttcattgctttttatataattgctttgtatgact 4732131  T
Q  498 attaac 503  Q
    ||||||    
T  4732130 attaac 4732125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 1810765 - 1810702
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  1810765 agtctttattgagaattatttgtgttcattgtttttcatatgattgttttgcatgactattaac 1810702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 9690525 - 9690587
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| | |||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  9690525 agtctttattcataattatttgtgttcattgcttttcgtacgattgtttgcatgactattaac 9690587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 465 - 503
Target Start/End: Original strand, 3194945 - 3194983
Alignment:
Q  465 ttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3194945 ttcattgcttttcatatgattgtttgcatgactattaac 3194983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 26337745 - 26337807
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||| || |||||||||| ||||||||| || ||||||||||||    
T  26337745 agtctttattcagaattatttgtgtttattgcttttcgtatgattgtatgaatgactattaac 26337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 403
Target Start/End: Original strand, 3194868 - 3194906
Alignment:
Q  365 tcatgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  3194868 tcatgtatagctaattccctttgattgagccatgatgaa 3194906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1811178 - 1811121
Alignment:
Q  1 acaaaaacatggttttgtgatggatgtgattggccaagaaaaatgataacatgttgaa 58  Q
    ||||||||||||||||   ||| ||||||||||||||| || ||||||||| ||||||    
T  1811178 acaaaaacatggttttacaatgaatgtgattggccaaggaatatgataacaagttgaa 1811121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Original strand, 26726675 - 26726771
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  ||||||||| |||||||||| ||||| | |||| || |||||||| ||||| |||| ||| ||||||||||||    
T  26726675 agtagttgatactctcttatttaataatattattaagtctttattcagaatcacttgtgtttattgcttt-catataattgcttgtatgactattaac 26726771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 18882934 - 18883038
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  18882934 atgaatcagtagttgaaaatctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcatgacta 18883033  T
Q  499 ttaac 503  Q
    |||||    
T  18883034 ttaac 18883038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 44508529 - 44508633
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  44508529 atgaatcagtagttaaaactctctttattatcaatattattcaatctttattcagaattatttgtgttcattgtttttcatatgattgtttgcatgacta 44508628  T
Q  499 ttaac 503  Q
    |||||    
T  44508629 ttaac 44508633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 9157710 - 9157813
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  9157710 atgaatcagtagttgaa-ctctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcatgacta 9157808  T
Q  499 ttaac 503  Q
     ||||    
T  9157809 gtaac 9157813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 407 - 503
Target Start/End: Complemental strand, 42354801 - 42354705
Alignment:
Q  407 gtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||| ||| | ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  42354801 gtagttgaaattgtctttattatcaatattattcagtctttattcagaatcatttgtgttcattgcttttcatatgattgtttgcatgactattaac 42354705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 399 - 498
Target Start/End: Original strand, 9154537 - 9154635
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| ||| ||||||||||||| |||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  9154537 atgaatcagtagttgaaa-tctctttattatcgatattactcggtctttattcagaattatttgtattcattgcttttcatatgattgtttgcatgacta 9154635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 10963128 - 10963232
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| |||||||  ||| ||||||||||||||||| |||||||| |||||||    
T  10963128 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacgtgtgttcattgcttttcatataattgtttgtatgacta 10963227  T
Q  499 ttaac 503  Q
    |||||    
T  10963228 ttaac 10963232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 10966637 - 10966741
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| |||||||  ||| ||||||||||||||||| |||||||| |||||||    
T  10966637 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacgtgtgttcattgcttttcatataattgtttgtatgacta 10966736  T
Q  499 ttaac 503  Q
    |||||    
T  10966737 ttaac 10966741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 419 - 503
Target Start/End: Complemental strand, 20536954 - 20536870
Alignment:
Q  419 ctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  20536954 ctctttattatcaatattatgcagtctttattcaaaattatttgtgttcattgcttttcttatgattgtttgtatgactattaac 20536870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 399 - 499
Target Start/End: Original strand, 10959621 - 10959721
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| | |||||||||||||| ||| |||||||| ||||||| ||||||| |||| ||||||||||||||||| |||| ||| |||||||    
T  10959621 atgaatcagtagttgatactctctttattattaatgttattcagcctttattcagaattacttgtgttcattgcttttcatataattgcttgtatgacta 10959720  T
Q  499 t 499  Q
    |    
T  10959721 t 10959721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 5887379 - 5887275
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | |||||||    
T  5887379 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcggatgacta 5887280  T
Q  499 ttaac 503  Q
    |||||    
T  5887279 ttaac 5887275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 5897363 - 5897259
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | |||||||    
T  5897363 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcggatgacta 5897264  T
Q  499 ttaac 503  Q
    |||||    
T  5897263 ttaac 5897259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 4250148 - 4250210
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  4250148 agtctttattcagaattatttgtgttcattgcttttcgtatgattgtttgcatgactattaac 4250210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 23375125 - 23375021
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  ||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||| | | |||||||    
T  23375125 atgaattagtagttgatactctcttatttaataatattattcagtttttattcagaattatttgtgttcattgcttttcatataattgctcgtatgacta 23375026  T
Q  499 ttaac 503  Q
    |||||    
T  23375025 ttaac 23375021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 431 - 503
Target Start/End: Complemental strand, 29233951 - 29233879
Alignment:
Q  431 aatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||| ||| ||||||||||||    
T  29233951 aatattattcagtctttattcagaattatttgtgttcattgtttttcatataattgcttgtatgactattaac 29233879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 2783841 - 2783946
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||| ||||||| |  ||||||||| ||| ||| |||||||||||||||| ||||||| |||| |||||||||||||| || |||| |||| ||||||    
T  2783841 atgaatgagtagttgatcctctctttagtattaatgttattcagtctttattcagaattacttgtgttcattgcttttcagataattgctttgtatgact 2783940  T
Q  498 attaac 503  Q
    ||||||    
T  2783941 attaac 2783946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 476
Target Start/End: Complemental strand, 25888811 - 25888734
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgctttt 476  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| ||||||| ||||    
T  25888811 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgttttt 25888734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 30158435 - 30158325
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaatta-----tttgttttcattgcttttcatatgattg-tttgca 492  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| |||||||      |||| |||||||||||||| || |||| |||| |    
T  30158435 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttgtgttcattgcttttcagataattgctttgta 30158336  T
Q  493 tgactattaac 503  Q
    |||||||||||    
T  30158335 tgactattaac 30158325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 19868744 - 19868807
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||  |||||||||||||||||| |||||||||||||||||    
T  19868744 agtctttattcagaattatttgtgtttgttgcttttcatatgattgctttgcatgactattaac 19868807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 6173741 - 6173645
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | |||| |||||||| |||||| | |||||||| ||||||||||||    
T  6173741 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgttcattgc-tttcatttaattgtttgtatgactattaac 6173645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Original strand, 9154485 - 9154523
Alignment:
Q  365 tcatgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  9154485 tcatgtctagctaattccctttgattgagccatgatgaa 9154523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 18551405 - 18551449
Alignment:
Q  415 aactctctttattatcaatattattcagtctttatttagaattat 459  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||    
T  18551405 aactctctttattatcaataacattcagtctttattcagaattat 18551449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 3305612 - 3305674
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  3305612 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 3305674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 28327206 - 28327268
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  28327206 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 28327268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 28330531 - 28330593
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  28330531 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 28330593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 16314977 - 16314881
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | || | || ||||| |||||||| |||| ||| ||||||||||||    
T  16314977 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttatgtttattgc-tttcatataattgcttgtatgactattaac 16314881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 16415143 - 16415047
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| |||||   |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  16415143 agtagttgatactctcttatttaataatattattcagtctttattcagaatcgcttgtgtttattgc-tttcatataattgcttgtatgactattaac 16415047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 18495971 - 18495875
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | || | || ||||| |||||||| |||| ||| ||||||||||||    
T  18495971 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttatgtttattgc-tttcatataattgcttgtatgactattaac 18495875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 18516117 - 18516021
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| |||||   |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  18516117 agtagttgatactctcttatttaataatattattcagtctttattcagaatcgcttgtgtttattgc-tttcatataattgcttgtatgactattaac 18516021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 435 - 475
Target Start/End: Complemental strand, 2279979 - 2279939
Alignment:
Q  435 ttattcagtctttatttagaattatttgttttcattgcttt 475  Q
    ||||||||| |||||| |||||||||||| |||||||||||    
T  2279979 ttattcagtttttattcagaattatttgtgttcattgcttt 2279939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 407 - 503
Target Start/End: Complemental strand, 1503823 - 1503727
Alignment:
Q  407 gtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  1503823 gtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgcttgcatgactattaac 1503727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 407 - 503
Target Start/End: Complemental strand, 1507027 - 1506931
Alignment:
Q  407 gtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  1507027 gtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgtttttcatatgattgcttgcatgactattaac 1506931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 38326090 - 38326194
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||||    
T  38326090 atgaatcagtagttgaaactttctttattatcaatattattccgtctttattcagaattatttgtgttcattacttttgatatgattgtttgcatgacta 38326189  T
Q  499 ttaac 503  Q
    |||||    
T  38326190 ttaac 38326194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 38326669 - 38326565
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||||    
T  38326669 atgaatcagtagttgaaactttctttattatcaatattattccgtctttattcagaattatttgtgttcattacttttgatatgattgtttgcatgacta 38326570  T
Q  499 ttaac 503  Q
    |||||    
T  38326569 ttaac 38326565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 503
Target Start/End: Original strand, 4577593 - 4577677
Alignment:
Q  416 actctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||| ||||||||||||||||||||||   |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  4577593 actctttttattatcaatattattcagt---tattcagaattatttgtgttcattgcttttcatataattgtttgcatgactattaac 4577677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 15704367 - 15704264
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| || |||| | |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||| |||| |||| ||| |||||||    
T  15704367 atgaattagaagttgatactctctttattattaatgttattcagtctttatttagaattatttgtgttcattg-tttttatataattgcttgtatgacta 15704269  T
Q  499 ttaac 503  Q
    |||||    
T  15704268 ttaac 15704264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 18938616 - 18938720
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | |||||||    
T  18938616 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcggatgacta 18938715  T
Q  499 ttaac 503  Q
    |||||    
T  18938716 ttaac 18938720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 402 - 503
Target Start/End: Original strand, 18011673 - 18011775
Alignment:
Q  402 aatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgactatt 500  Q
    ||||||||||| | |||||||||||||| ||| |||||||||||||||||| ||||| |||| |||||||||||| ||||  ||| |||| |||||||||    
T  18011673 aatcagtagttgatactctctttattattaatgttattcagtctttatttataattacttgtgttcattgctttttatatagttgctttgtatgactatt 18011772  T
Q  501 aac 503  Q
    |||    
T  18011773 aac 18011775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 13518024 - 13518129
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| |  ||||||||||||| ||| |||||||||||||||| | ||||| |||| ||||| |||||||| || |||| |||| ||||||    
T  13518024 atgaatcagtagtttatcctctctttattattaatgttattcagtctttattcaaaattacttgtgttcatagcttttcaaataattgatttgtatgact 13518123  T
Q  498 attaac 503  Q
    ||||||    
T  13518124 attaac 13518129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 15719621 - 15719518
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| ||||||| |||| |||| |||| ||  |||||||    
T  15719621 atgaattagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattg-tttttatataattgcttatatgacta 15719523  T
Q  499 ttaac 503  Q
    |||||    
T  15719522 ttaac 15719518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 11059516 - 11059624
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaat---attattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatg 494  Q
    |||||||||||||| | |||||||||||||| |||   ||||||||||||||||| ||| ||| |||| ||||||| |||||| || |||| |||| |||    
T  11059516 atgaatcagtagttgatactctctttattattaatgttattattcagtctttattcagagttacttgtgttcattgtttttcagataattgctttgtatg 11059615  T
Q  495 actattaac 503  Q
    |||||||||    
T  11059616 actattaac 11059624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 503
Target Start/End: Original strand, 30719524 - 30719599
Alignment:
Q  426 ttatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||| |||||| ||||||||||   |||||||||||| |||||||  |||||||||||||||||    
T  30719524 ttatcaatataattcagtttttattcagaattatttaagttcattgctttttatatgat--tttgcatgactattaac 30719599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 29435509 - 29435575
Alignment:
Q  436 tattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||||||||||| ||||||| |||| |||||||| |||||||| |||| ||| ||||||||||||    
T  29435509 tattcagtctttattcagaattacttgtgttcattgc-tttcatataattgcttgtatgactattaac 29435575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Original strand, 38326038 - 38326076
Alignment:
Q  365 tcatgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  38326038 tcatgtctagctaattccctttgattgagccatgatgaa 38326076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 38326721 - 38326683
Alignment:
Q  365 tcatgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  38326721 tcatgtctagctaattccctttgattgagccatgatgaa 38326683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 1503881 - 1503843
Alignment:
Q  365 tcatgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||||||||||| || |||||||||||||||||||||    
T  1503881 tcatgtctagctaattctctttgattgagccatgatgaa 1503843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 1507085 - 1507047
Alignment:
Q  365 tcatgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||||||||||| || |||||||||||||||||||||    
T  1507085 tcatgtctagctaattctctttgattgagccatgatgaa 1507047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 40678128 - 40678066
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  40678128 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 40678066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Original strand, 22592243 - 22592339
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| |  ||| || ||||| |||||||| |||| ||| ||||||||||||    
T  22592243 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacatgtgtttattgc-tttcatataattgcttgtatgactattaac 22592339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 403
Target Start/End: Original strand, 4577522 - 4577558
Alignment:
Q  367 atgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||||||||| |||||||||||||| |||||||||    
T  4577522 atgtctagctaattccctttgattgagtcatgatgaa 4577558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 30645194 - 30645298
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| | ||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||    
T  30645194 atgaattaatagttgaaactctctttattattaatattatccagtctttattcagaattatttgtgttcattgcttttgatatgattgtttgcatgacta 30645293  T
Q  499 ttaac 503  Q
    |||||    
T  30645294 ttaac 30645298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 27863953 - 27863848
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||| ||||||||| |||| ||||||    
T  27863953 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgctttttatatgattgttttgtatgact 27863854  T
Q  498 attaac 503  Q
    ||||||    
T  27863853 attaac 27863848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 277 - 356
Target Start/End: Original strand, 30645011 - 30645090
Alignment:
Q  277 acgagacaaaaggagaaggagaaaagctcatggaatttggaatatgcaagagtactgattaaatagaacaaagccggtag 356  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  30645011 acgagacaaaaggacgacgagaaaagctcatggaatttggaatatgcaacagtactgattaaatagagcaaagtcggtag 30645090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 399 - 499
Target Start/End: Original strand, 14187721 - 14187822
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||| |||| |||| |||| ||||||    
T  14187721 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgctttttatataattgctttgtatgact 14187820  T
Q  498 at 499  Q
    ||    
T  14187821 at 14187822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 22653982 - 22654087
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||| ||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||| |||| |||| |||| ||||||    
T  22653982 atgaatcaatagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgctttttatattattgctttgtatgact 22654081  T
Q  498 attaac 503  Q
    ||||||    
T  22654082 attaac 22654087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 18696323 - 18696220
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| || |||| | |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||| |||| |||| ||| |||||||    
T  18696323 atgaattagaagttgatactctctttattattaatgttattcagtctttatttagaattatttgtgttcattg-tttttatataattgcttgtatgacta 18696225  T
Q  499 ttaac 503  Q
    |||||    
T  18696224 ttaac 18696220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 20262277 - 20262380
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||| |||||||| |||| ||| |||||||    
T  20262277 atgaattagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgc-tttcatataattgcttgtatgacta 20262375  T
Q  499 ttaac 503  Q
    |||||    
T  20262376 ttaac 20262380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 21048907 - 21049010
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||| |||||||| |||| ||| |||||||    
T  21048907 atgaattagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgc-tttcatataattgcttgtatgacta 21049005  T
Q  499 ttaac 503  Q
    |||||    
T  21049006 ttaac 21049010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 24434753 - 24434857
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||  | | |||||||    
T  24434753 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattactcgtatgacta 24434852  T
Q  499 ttaac 503  Q
    |||||    
T  24434853 ttaac 24434857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 5827789 - 5827851
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  5827789 agtctttattcagaattatttgtgttcattgcttttcttatgattgtttgcttgactattaac 5827851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 5963976 - 5964081
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | ||||||| |||||| |||   |||||||||||||| ||||||| |||| |||||||||||||| || |||| |||| ||||||    
T  5963976 atgaatcagtagttgatactctctgtattattaatgcgattcagtctttattcagaattacttgtgttcattgcttttcagataattgctttgtatgact 5964075  T
Q  498 attaac 503  Q
    ||||||    
T  5964076 attaac 5964081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 24444799 - 24444903
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| |||||| |||||||||| |||  | | |||||||    
T  24444799 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcatttcttttcatataattactcgtatgacta 24444898  T
Q  499 ttaac 503  Q
    |||||    
T  24444899 ttaac 24444903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 31981080 - 31981173
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| ||||||| |||||||||||||||||||||           |||||||||| ||||||| |||||||||||||||||  |||||||    
T  31981080 atgaatcagtagttgaaactctttttattatcaatattattcag-----------aattatttgtgttcattgattttcatatgattgtttcaatgacta 31981168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 31984767 - 31984814
Alignment:
Q  456 ttatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  31984767 ttatttgtattcattgcttttcatatgattggttgcatgactattaac 31984814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 503
Target Start/End: Original strand, 17543779 - 17543875
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  17543779 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 17543875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 503
Target Start/End: Complemental strand, 24903848 - 24903778
Alignment:
Q  432 atattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||||||||||||||| ||||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  24903848 atattattcagtctttattcagaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 24903778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 39660313 - 39660251
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  39660313 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 39660251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 17013422 - 17013326
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||| ||||||||||||||| ||||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  17013422 agtagttgatactctcttatttaataataatattcagtctttattcagaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 17013326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 435 - 475
Target Start/End: Original strand, 452901 - 452941
Alignment:
Q  435 ttattcagtctttatttagaattatttgttttcattgcttt 475  Q
    |||||||||||||||| ||||||| |||| |||||||||||    
T  452901 ttattcagtctttattcagaattacttgtgttcattgcttt 452941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 70; Significance: 3e-31; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 19778 - 19880
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||  |||||||||||| |||||  |||||||||| ||||||||||||||||    
T  19778 atgaatcagtagttgaaactctctttattatcaatattattcactctttatccagaattatttgtgttcat--cttttcatattattgtttgcatgacta 19875  T
Q  499 ttaac 503  Q
    |||||    
T  19876 ttaac 19880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 13328 - 13431
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||  | |||||||||| || | |||||||||||||||| ||||||||||||    
T  13328 atgaatcagtaattgaaactct-tttattatcaatattattcagtctttatccaaaattatttgtgttaactgcttttcatatgattttttgcatgacta 13426  T
Q  499 ttaac 503  Q
    |||||    
T  13427 ttaac 13431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 27344 - 27447
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||  | |||||||||| || | |||||||||||||||| ||||||||||||    
T  27344 atgaatcagtaattgaaactct-tttattatcaatattattcagtctttatccaaaattatttgtgttaactgcttttcatatgattttttgcatgacta 27442  T
Q  499 ttaac 503  Q
    |||||    
T  27443 ttaac 27447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 28918094 - 28918199
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgt-ttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| ||||||||||||||||| ||||| ||| ||||||    
T  28918094 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcatataattgtgttgtatgact 28918193  T
Q  498 attaac 503  Q
    ||||||    
T  28918194 attaac 28918199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 37641587 - 37641692
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||||| || |||| |||| ||||||    
T  37641587 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcagataattgctttgtatgact 37641686  T
Q  498 attaac 503  Q
    ||||||    
T  37641687 attaac 37641692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 16839330 - 16839226
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | |||||||    
T  16839330 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcggatgacta 16839231  T
Q  499 ttaac 503  Q
    |||||    
T  16839230 ttaac 16839226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 16849260 - 16849156
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | |||||||    
T  16849260 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcggatgacta 16849161  T
Q  499 ttaac 503  Q
    |||||    
T  16849160 ttaac 16849156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 17903184 - 17903081
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | |||||||| ||||| ||| |||||||||||||||| ||||||| |||| |||||||| |||||||| |||  ||| |||||||    
T  17903184 atgaattagtagttgatactctcttaattattaatgttattcagtctttattcagaattacttgtgttcattgc-tttcatataatttcttgtatgacta 17903086  T
Q  499 ttaac 503  Q
    |||||    
T  17903085 ttaac 17903081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 503
Target Start/End: Original strand, 20964185 - 20964281
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  ||| |||||||||||||||| |||||||||||| |||||||| |||||| | |||| ||| ||||||||||||    
T  20964185 agtagttgatactctcttatttaataatgttattcagtctttattcagaattatttgtgttcattgc-tttcatttaattgcttgtatgactattaac 20964281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 49716129 - 49716195
Alignment:
Q  436 tattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||||||||||| ||||||| |||| |||||||| |||||||| |||| ||| ||||||||||||    
T  49716129 tattcagtctttattcagaattacttgtgttcattgc-tttcatataattgcttgtatgactattaac 49716195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 49719612 - 49719678
Alignment:
Q  436 tattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||||||||||| ||||||| |||| |||||||| |||||||| |||| ||| ||||||||||||    
T  49719612 tattcagtctttattcagaattacttgtgttcattgc-tttcatataattgcttgtatgactattaac 49719678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 23441640 - 23441578
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  23441640 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 23441578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 33898088 - 33898150
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  33898088 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 33898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 24200633 - 24200537
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| | ||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  24200633 agtagttgatactctcttatttaataatattattcagtctttattcaaaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 24200537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 435 - 475
Target Start/End: Original strand, 20981117 - 20981157
Alignment:
Q  435 ttattcagtctttatttagaattatttgttttcattgcttt 475  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  20981117 ttattcagtctatattcagaattatttgtgttcattgcttt 20981157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 426 - 503
Target Start/End: Original strand, 6985 - 7062
Alignment:
Q  426 ttatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||    
T  6985 ttatcaatataattcagtctttattcagaattatttatgttcattgctttttatatgattgtttgcatgactattaac 7062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 26182023 - 26182127
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| ||| |||||||    
T  26182023 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgcttgtatgacta 26182122  T
Q  499 ttaac 503  Q
    |||||    
T  26182123 ttaac 26182127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 20100364 - 20100468
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||||| |||| |||| |||| ||||||    
T  20100364 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgctttt-atataattgctttgtatgact 20100462  T
Q  498 attaac 503  Q
    ||||||    
T  20100463 attaac 20100468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 426 - 503
Target Start/End: Complemental strand, 22083813 - 22083736
Alignment:
Q  426 ttatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||| |||||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||    
T  22083813 ttatcaatataatttagtctttattcagaattatttatgttcattgctttttatatgattgtttgcatgactattaac 22083736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 26460187 - 26460291
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | |||||||    
T  26460187 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattgctcggatgacta 26460286  T
Q  499 ttaac 503  Q
    |||||    
T  26460287 ttaac 26460291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 5827106 - 5827002
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| ||||||| |||||| || |||| |||| ||||||    
T  5827106 atgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattg-ttttcaaataattgctttgtatgact 5827008  T
Q  498 attaac 503  Q
    ||||||    
T  5827007 attaac 5827002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 489
Target Start/End: Complemental strand, 11825754 - 11825664
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgttt 489  Q
    |||||||||||||| | |||||||||||||| ||| ||||||| |||||||| ||||||| |||| |||||| ||||||| || |||||||    
T  11825754 atgaatcagtagttgatactctctttattattaatgttattcaatctttattcagaattacttgtgttcattacttttcacataattgttt 11825664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 748440 - 748335
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgact 497  Q
    |||||||||||||| | |||||||||||||| ||| |||||| ||||||||| ||||||| |||| ||||||| |||| |||||| || |||| ||||||    
T  748440 atgaatcagtagttgatactctctttattattaatgttattctgtctttattcagaattacttgtgttcattgttttttatatgactgctttgtatgact 748341  T
Q  498 attaac 503  Q
     |||||    
T  748340 tttaac 748335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 407 - 503
Target Start/End: Original strand, 22256985 - 22257082
Alignment:
Q  407 gtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgactattaac 503  Q
    |||||| | |||||||||||||| ||  |||||||||||||||| ||||||| |||| |||||||||||| |||| |||| |||| ||||||||||||    
T  22256985 gtagttgatactctctttattattaacgttattcagtctttattcagaattacttgtgttcattgctttttatataattgctttgtatgactattaac 22257082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 481
Target Start/End: Original strand, 2349198 - 2349277
Alignment:
Q  402 aatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatat 481  Q
    ||||||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||| ||||| ||||    
T  2349198 aatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcatttctttttatat 2349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 3541524 - 3541462
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||| ||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  3541524 agtcttcattcagaattatttgtgttcattgcttttcgtatgattgtttgaatgactattaac 3541462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 503
Target Start/End: Complemental strand, 22233018 - 22232921
Alignment:
Q  407 gtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgactattaac 503  Q
    |||||| | |||||||||| ||| ||| ||||| |||||||||| ||||||| |||| |||||||||||| |||| |||| |||| ||||||||||||    
T  22233018 gtagttgatactctctttactattaatgttatttagtctttattcagaattacttgtgttcattgctttttatataattgttttgtatgactattaac 22232921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 503
Target Start/End: Original strand, 22253721 - 22253818
Alignment:
Q  407 gtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattg-tttgcatgactattaac 503  Q
    |||||| | |||||||||| ||| ||| ||||| |||||||||| ||||||| |||| |||||||||||| |||| |||| |||| ||||||||||||    
T  22253721 gtagttgatactctctttactattaatgttatttagtctttattcagaattacttgtgttcattgctttttatataattgttttgtatgactattaac 22253818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 441
Target Start/End: Complemental strand, 23467484 - 23467442
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattca 441  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  23467484 atgaatcagtagttgaaactctctttattatcaatattattca 23467442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 22233082 - 22233044
Alignment:
Q  365 tcatgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22233082 tcatgtctagctaattccctttgattgagccatgatgaa 22233044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Original strand, 22253657 - 22253695
Alignment:
Q  365 tcatgtctagctaagtccctttgattgagccatgatgaa 403  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22253657 tcatgtctagctaattccctttgattgagccatgatgaa 22253695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 710407 - 710311
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  710407 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7569604 - 7569661
Alignment:
Q  1 acaaaaacatggttttgtgatggatgtgattggccaagaaaaatgataacatgttgaa 58  Q
    |||||||||||||| | ||||| ||||||||||||||| ||||||||| || ||||||    
T  7569604 acaaaaacatggttctatgatgaatgtgattggccaaggaaaatgatatcaagttgaa 7569661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7576019 - 7576076
Alignment:
Q  1 acaaaaacatggttttgtgatggatgtgattggccaagaaaaatgataacatgttgaa 58  Q
    |||||||||||||| | ||||| ||||||||||||||| ||||||||| || ||||||    
T  7576019 acaaaaacatggttctatgatgaatgtgattggccaaggaaaatgatatcaagttgaa 7576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 489
Target Start/End: Original strand, 8397590 - 8397654
Alignment:
Q  425 attatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgttt 489  Q
    ||||| ||| |||||||||||||||| ||||||| |||| ||||||| |||||| || |||||||    
T  8397590 attattaatgttattcagtctttattcagaattacttgtgttcattgtttttcagataattgttt 8397654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 38431155 - 38431217
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  38431155 agtctttattcagaattatttgtgcttactgcttttcttatgattgtttgtatgactactaac 38431217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 23599152 - 23599056
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | |||| || |||||  ||||||| |||| ||| ||||||||||||    
T  23599152 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgc-cttcatataattgcttgtatgactattaac 23599056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 503
Target Start/End: Complemental strand, 44018146 - 44018086
Alignment:
Q  443 tctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  44018146 tctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 44018086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 53279 - 53176
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| || |||| | |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||| |||| |||| ||| |||||||    
T  53279 atgaattagaagttgatactctctttattattaatgttattcagtctttatttagaattatttgtgttcattg-tttttatataattgcttgtatgacta 53181  T
Q  499 ttaac 503  Q
    |||||    
T  53180 ttaac 53176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 68178 - 68075
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | |||||||||||||| ||| |||||||||||||||| ||||||| |||| ||||||| |||| |||| |||| ||  |||||||    
T  68178 atgaattagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattg-tttttatataattgcttatatgacta 68080  T
Q  499 ttaac 503  Q
    |||||    
T  68079 ttaac 68075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 503
Target Start/End: Original strand, 27083 - 27187
Alignment:
Q  399 atgaatcagtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgacta 498  Q
    |||||| ||||||| | ||||||||  |||  |||||||||||||||||||| |||||||||||| |||||||||||||| || |||| | | |||||||    
T  27083 atgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcagataattgctagtatgacta 27182  T
Q  499 ttaac 503  Q
    |||||    
T  27183 ttaac 27187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 502
Target Start/End: Original strand, 2151 - 2287
Alignment:
Q  367 atgtctagctaagtccctttgattgagccatgatgaatcagta--gttaaaactctctttattatcaatattattcagtctttatttagaattatttgtt 464  Q
    |||||||||||| ||||||||||||||||||||| |||   ||  ||| | ||| |||||||||  ||| |||||||||||||||| ||||||| ||||     
T  2151 atgtctagctaattccctttgattgagccatgattaatatatatagttgatactttctttattaataatgttattcagtctttattcagaattagttgtg 2250  T
Q  465 ttcattgcttttcatatgattgtttgcatgactattaa 502  Q
    |||||||| |||||||| |||| ||| |||| ||||||    
T  2251 ttcattgc-tttcatataattgcttgtatgattattaa 2287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 502
Target Start/End: Original strand, 5973 - 6113
Alignment:
Q  363 attcatgtctagctaagtccctttgattgagccatgatgaatcagta--gttaaaactctctttattatcaatattattcagtctttatttagaattatt 460  Q
    |||||||| ||||||| ||||||||||||||||||||| |||   ||  ||| | ||| |||||||||  ||| |||||||||||||||| ||||||| |    
T  5973 attcatgtttagctaattccctttgattgagccatgattaatatatatagttgatactttctttattaataatgttattcagtctttattcagaattact 6072  T
Q  461 tgttttcattgcttttcatatgattgtttgcatgactattaa 502  Q
    ||| || ||||| |||||||| |||| ||| |||| ||||||    
T  6073 tgtgtttattgc-tttcatataattgcttgtatgattattaa 6113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 4021 - 4083
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  4021 agtctttattcagaattatttgtgttcattggttttcgtatgattggttgcatgactattaac 4083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 13354 - 13416
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| |||||||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  13354 agtctttattcagaattatttgtgttcattgctttttgtataattgtttgcatgactattaac 13416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 52881 - 52942
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaa 502  Q
    |||||||||| |||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  52881 agtctttattcagaattatttgtgttcaaagcttttcgtatgattgtttgcatgactattaa 52942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 29084 - 29145
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaa 502  Q
    |||||||||| |||||||||||| ||||  | |||||||||||||| |||||||||||||||    
T  29084 agtctttattcagaattatttgtgttcaaagattttcatatgattgattgcatgactattaa 29145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 227125 - 227172
Alignment:
Q  456 ttatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  227125 ttatttgtattcattgcttttcatatgattggttgcatgactattaac 227172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 27269 - 27173
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  27269 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 27173  T

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Target: scaffold0012; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 31455 - 31359
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||||||||||||||||||| ||||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  31455 agtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 31359  T

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Target: scaffold0273 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 20041 - 19979
Alignment:
Q  441 agtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    |||||||||| ||||||||||||  | | |||||||| |||||||||||| ||||||| ||||    
T  20041 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaac 19979  T

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Target: scaffold0175 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 29050 - 28954
Alignment:
Q  406 agtagttaaaactctctttattatcaatattattcagtctttatttagaattatttgttttcattgcttttcatatgattgtttgcatgactattaac 503  Q
    ||||||| | ||||||||  |||  |||| ||||||||||||||| ||||| | |||| || ||||| |||||||| |||| ||| ||||||||||||    
T  29050 agtagttgatactctcttatttaataatagtattcagtctttattcagaatcacttgtgtttattgc-tttcatataattgcttgtatgactattaac 28954  T

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