View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9837_low_5 (Length: 458)
Name: NF9837_low_5
Description: NF9837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9837_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 126 - 445
Target Start/End: Original strand, 6305758 - 6306077
Alignment:
| Q |
126 |
taaaaagataaggaatgcctggaagtgttactatttacgcttacaatggaacttaattatatagtccaaggcatgtgaatacatgaagtattggattaat |
225 |
Q |
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| T |
6305758 |
taaaaagataaggaatgcctggacgtgttactatttacgcttacaatggaacttaattata--gtccaaggcatgtgaatacatgaagtattggattaat |
6305855 |
T |
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| Q |
226 |
gatg---cctttta----gattcgaaagcttatattgacatgtgaatacatga----agctgtccgtgatcatccatacatttgattttcagagtctctt |
314 |
Q |
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| T |
6305856 |
gatgatgccttttatttagattcgaaagcttatattgacatgtgaatacatgaatgaagctgtccgtgatcatccatacatttgattttcagagtctctt |
6305955 |
T |
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| Q |
315 |
tacactgtagccggatatttgaccccaaattcgaatatcctactgtcctctttacccctaacaattccttaacagccataactatctatggctgttaagg |
414 |
Q |
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| T |
6305956 |
tacactgtagccggatatttgaccccaaattcgaatatccaactgtcctctttacccctaacaatt---------ccctaactatctatggctgttaagg |
6306046 |
T |
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| Q |
415 |
aatggttcctcaaacattactattcacacct |
445 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
6306047 |
aatggttcctcaaacattactattcacacct |
6306077 |
T |
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