View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9837_low_7 (Length: 408)

Name: NF9837_low_7
Description: NF9837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9837_low_7
NF9837_low_7
[»] chr7 (33 HSPs)
chr7 (113-408)||(26633091-26633386)
chr7 (1-114)||(26632689-26632802)
chr7 (257-408)||(40738032-40738184)
chr7 (1-156)||(26609972-26610130)
chr7 (257-408)||(36438392-36438543)
chr7 (281-408)||(9479027-9479150)
chr7 (257-408)||(18895438-18895594)
chr7 (281-408)||(32956670-32956798)
chr7 (8-127)||(26623121-26623240)
chr7 (316-406)||(7366618-7366708)
chr7 (292-408)||(30739029-30739146)
chr7 (290-408)||(25061809-25061926)
chr7 (290-408)||(41908081-41908201)
chr7 (281-405)||(40841289-40841414)
chr7 (259-408)||(18015623-18015774)
chr7 (302-408)||(33909980-33910087)
chr7 (41-95)||(26617196-26617250)
chr7 (315-408)||(26282583-26282676)
chr7 (315-408)||(1365939-1366032)
chr7 (315-408)||(40001737-40001830)
chr7 (302-408)||(36796413-36796520)
chr7 (301-408)||(6380125-6380234)
chr7 (301-352)||(12251485-12251536)
chr7 (314-408)||(44894070-44894165)
chr7 (281-382)||(41852365-41852466)
chr7 (318-403)||(42311943-42312027)
chr7 (301-408)||(8358335-8358443)
chr7 (301-408)||(42161161-42161271)
chr7 (301-408)||(4099883-4099991)
chr7 (301-406)||(33419161-33419267)
chr7 (1-58)||(26652214-26652271)
chr7 (1-58)||(26640541-26640602)
chr7 (298-345)||(38525097-38525145)
[»] chr2 (33 HSPs)
chr2 (253-408)||(36059946-36060103)
chr2 (257-408)||(39081269-39081421)
chr2 (257-408)||(1418781-1418932)
chr2 (252-388)||(32186211-32186349)
chr2 (281-408)||(38599298-38599425)
chr2 (315-406)||(13997244-13997335)
chr2 (252-407)||(27302570-27302724)
chr2 (299-404)||(29480682-29480787)
chr2 (306-408)||(1226308-1226408)
chr2 (301-406)||(42411601-42411706)
chr2 (301-408)||(2063721-2063828)
chr2 (301-408)||(45042303-45042412)
chr2 (297-398)||(13001556-13001658)
chr2 (298-408)||(34061897-34062007)
chr2 (259-408)||(7993503-7993655)
chr2 (301-408)||(19367460-19367568)
chr2 (252-408)||(31273207-31273364)
chr2 (259-408)||(26151788-26151941)
chr2 (259-408)||(13020292-13020446)
chr2 (315-408)||(21747271-21747364)
chr2 (301-408)||(45618892-45619000)
chr2 (315-408)||(18916095-18916188)
chr2 (315-408)||(38985750-38985842)
chr2 (301-408)||(18676352-18676460)
chr2 (301-408)||(41096579-41096687)
chr2 (315-408)||(15457430-15457523)
chr2 (327-408)||(6530601-6530682)
chr2 (290-398)||(9029519-9029625)
chr2 (315-408)||(18172981-18173073)
chr2 (301-408)||(12269341-12269448)
chr2 (315-400)||(17117686-17117771)
chr2 (301-406)||(36481321-36481425)
chr2 (356-408)||(18482548-18482600)
[»] chr4 (25 HSPs)
chr4 (257-408)||(22423558-22423707)
chr4 (257-408)||(43154829-43154983)
chr4 (281-407)||(24449019-24449148)
chr4 (281-408)||(35654021-35654146)
chr4 (290-408)||(21791588-21791706)
chr4 (300-407)||(5545244-5545351)
chr4 (259-408)||(53011585-53011735)
chr4 (301-406)||(27632313-27632419)
chr4 (301-408)||(19661295-19661402)
chr4 (290-400)||(26329081-26329189)
chr4 (301-408)||(32130831-32130938)
chr4 (315-408)||(45172686-45172778)
chr4 (322-408)||(10575564-10575647)
chr4 (301-408)||(16072509-16072617)
chr4 (301-408)||(23426207-23426315)
chr4 (315-408)||(34982154-34982247)
chr4 (315-408)||(55134138-55134231)
chr4 (301-408)||(28463629-28463737)
chr4 (281-341)||(48512330-48512390)
chr4 (301-406)||(21168972-21169078)
chr4 (301-408)||(11681783-11681892)
chr4 (301-408)||(11690062-11690171)
chr4 (301-405)||(29221665-29221770)
chr4 (328-408)||(29579823-29579903)
chr4 (301-408)||(23256511-23256617)
[»] chr5 (27 HSPs)
chr5 (283-408)||(138043-138167)
chr5 (281-408)||(16515424-16515547)
chr5 (290-408)||(27351254-27351372)
chr5 (257-402)||(10033421-10033563)
chr5 (318-408)||(17325777-17325867)
chr5 (290-408)||(23069125-23069243)
chr5 (290-408)||(8379562-8379680)
chr5 (290-408)||(40956223-40956336)
chr5 (315-408)||(43511548-43511641)
chr5 (315-408)||(5829315-5829408)
chr5 (315-408)||(10591314-10591407)
chr5 (315-408)||(42291922-42292015)
chr5 (301-408)||(13656123-13656233)
chr5 (323-408)||(4734623-4734708)
chr5 (327-408)||(20975927-20976008)
chr5 (300-404)||(26377819-26377925)
chr5 (290-408)||(931283-931403)
chr5 (315-408)||(17513977-17514070)
chr5 (315-408)||(29156120-29156213)
chr5 (323-399)||(40779130-40779206)
chr5 (290-345)||(12661208-12661263)
chr5 (341-408)||(18873409-18873480)
chr5 (315-408)||(3349770-3349862)
chr5 (327-408)||(26311948-26312029)
chr5 (301-408)||(13474545-13474653)
chr5 (301-408)||(36718608-36718717)
chr5 (327-408)||(19099355-19099436)
[»] chr1 (35 HSPs)
chr1 (281-408)||(37873803-37873929)
chr1 (252-408)||(44836762-44836926)
chr1 (290-408)||(15441195-15441313)
chr1 (281-406)||(42740005-42740131)
chr1 (281-407)||(26486407-26486529)
chr1 (290-408)||(27703570-27703688)
chr1 (306-406)||(24556727-24556827)
chr1 (314-408)||(17674395-17674488)
chr1 (257-408)||(22386878-22387026)
chr1 (290-408)||(5560388-5560506)
chr1 (297-394)||(1269471-1269568)
chr1 (295-406)||(31369432-31369542)
chr1 (296-408)||(50371045-50371157)
chr1 (315-408)||(12971336-12971429)
chr1 (325-408)||(38263804-38263887)
chr1 (327-408)||(10109662-10109743)
chr1 (301-374)||(13121752-13121825)
chr1 (281-408)||(6333557-6333684)
chr1 (301-408)||(25930518-25930627)
chr1 (252-408)||(29208139-29208297)
chr1 (259-406)||(30899526-30899677)
chr1 (301-408)||(12884178-12884286)
chr1 (301-408)||(14084742-14084849)
chr1 (301-407)||(50552410-50552517)
chr1 (301-408)||(6150636-6150744)
chr1 (301-404)||(20905332-20905437)
chr1 (301-406)||(33124673-33124781)
chr1 (252-408)||(30004948-30005103)
chr1 (301-408)||(48722411-48722521)
chr1 (301-408)||(51110142-51110250)
chr1 (327-406)||(17487326-17487405)
chr1 (276-408)||(18127978-18128111)
chr1 (290-408)||(3907377-3907494)
chr1 (301-379)||(28189313-28189391)
chr1 (301-342)||(20470643-20470684)
[»] chr8 (20 HSPs)
chr8 (281-407)||(35874819-35874948)
chr8 (281-408)||(3628788-3628914)
chr8 (290-408)||(32098219-32098337)
chr8 (315-408)||(34523992-34524085)
chr8 (315-406)||(39697981-39698072)
chr8 (297-402)||(33452705-33452808)
chr8 (301-408)||(7858000-7858108)
chr8 (301-408)||(18420650-18420758)
chr8 (281-408)||(30915329-30915459)
chr8 (301-408)||(43968111-43968219)
chr8 (259-408)||(13585171-13585322)
chr8 (315-408)||(23567315-23567408)
chr8 (259-352)||(3445553-3445648)
chr8 (259-408)||(44665087-44665235)
chr8 (290-345)||(41666040-41666097)
chr8 (300-398)||(42777668-42777766)
chr8 (315-408)||(12531489-12531582)
chr8 (324-408)||(42076046-42076131)
chr8 (327-408)||(43926364-43926445)
chr8 (330-408)||(3471545-3471623)
[»] chr3 (32 HSPs)
chr3 (257-408)||(46904603-46904765)
chr3 (257-408)||(36538227-36538377)
chr3 (281-408)||(7766959-7767086)
chr3 (299-408)||(42009303-42009412)
chr3 (301-408)||(27303103-27303210)
chr3 (281-408)||(50677355-50677480)
chr3 (281-408)||(51146836-51146960)
chr3 (290-408)||(21596240-21596358)
chr3 (281-407)||(40152172-40152298)
chr3 (301-408)||(23164613-23164720)
chr3 (301-408)||(54430468-54430575)
chr3 (314-408)||(21784825-21784919)
chr3 (293-406)||(19965923-19966038)
chr3 (301-408)||(46791738-46791846)
chr3 (301-408)||(18408107-18408214)
chr3 (298-408)||(41707096-41707207)
chr3 (301-408)||(51939597-51939704)
chr3 (302-408)||(1649872-1649978)
chr3 (259-403)||(23067771-23067919)
chr3 (252-408)||(28132776-28132936)
chr3 (315-408)||(48627070-48627163)
chr3 (301-408)||(8364087-8364195)
chr3 (301-408)||(29387795-29387903)
chr3 (298-408)||(24252531-24252643)
chr3 (301-408)||(25599127-25599236)
chr3 (315-408)||(43905884-43905977)
chr3 (316-408)||(52655164-52655257)
chr3 (301-408)||(13401375-13401482)
chr3 (341-407)||(1255092-1255158)
chr3 (290-332)||(1255176-1255218)
chr3 (298-347)||(27110909-27110959)
chr3 (301-408)||(27729810-27729918)
[»] chr6 (24 HSPs)
chr6 (281-408)||(30915407-30915537)
chr6 (281-392)||(6294176-6294286)
chr6 (306-404)||(7341130-7341228)
chr6 (257-408)||(3748609-3748760)
chr6 (290-400)||(11088461-11088569)
chr6 (281-408)||(350312-350437)
chr6 (300-408)||(19231528-19231635)
chr6 (301-408)||(6360676-6360783)
chr6 (301-408)||(57603-57711)
chr6 (301-408)||(2618271-2618378)
chr6 (314-408)||(12614757-12614851)
chr6 (299-408)||(7525207-7525317)
chr6 (323-408)||(1093081-1093166)
chr6 (315-408)||(1690674-1690767)
chr6 (315-408)||(29308508-29308601)
chr6 (301-408)||(3514891-3514999)
chr6 (281-408)||(14893458-14893584)
chr6 (327-408)||(29149345-29149426)
chr6 (301-408)||(6754122-6754229)
chr6 (281-370)||(21945948-21946034)
chr6 (334-408)||(31234862-31234934)
chr6 (334-408)||(31243999-31244071)
chr6 (301-342)||(31258565-31258606)
chr6 (315-408)||(31860933-31861024)
[»] scaffold0126 (1 HSPs)
scaffold0126 (314-408)||(16638-16733)
[»] scaffold0100 (1 HSPs)
scaffold0100 (301-408)||(46214-46322)
[»] scaffold0606 (1 HSPs)
scaffold0606 (323-408)||(8436-8521)


Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 113 - 408
Target Start/End: Original strand, 26633091 - 26633386
Alignment:
Q  113 tagatacaaaaaggtcatagctggattttttacaactgcaacactatactgctactgtagcagtagacagggctgaaccttgggagtgcaaggagctcaa 212  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  26633091 tagatacaaaaaggttataactggattttttacaactgcaacactatactgcaactgtagcagtagacagggccgaaccttgggagtgcaaggagctcaa 26633190  T
Q  213 ctaagccgaacctctaaaaactttgggcctnnnnnnnnnttaagtataatacccacccccatttaaagaaaaattacatgttacttctttttctttcttc 312  Q
    |||||||| |||||||||||||||||||||         |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  26633191 ctaagccggacctctaaaaactttgggcctaaaaacaaattaagtataatacccaccccaacttaaagaaaaattacatgttacttctttttctttcttc 26633290  T
Q  313 ggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26633291 ggtacacgtatgagttttttctagactctagttctactttctggacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 26633386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26632689 - 26632802
Alignment:
Q  1 tgttatttacttgaaattattgctttggaaatatggataccgaataattttctgtatatttgataaatgattgagtctctcaaacatgttgtattagtcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |     
T  26632689 tgttatttacttgaaattattgctttggaaatatggataccgaataattttctgtatatttgatacatgattgggtctctcaaatatgttgtattagcct 26632788  T
Q  101 taatttaagttata 114  Q
    ||||||||||||||    
T  26632789 taatttaagttata 26632802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 40738184 - 40738032
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttct 354  Q
    ||||||||||||||||| |||||   |||||||||||||||| | ||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| |    
T  40738184 tataatacccacccccacttaaattaaaaaattacatgttacgttttttt-tttattcggtacgcgtatgagttttttctaaactctagttctacttttt 40738086  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     ||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  40738085 tgacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatca 40738032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26609972 - 26610130
Alignment:
Q  1 tgttatttacttgaaattattgctttggaaatatggataccgaataattttctgtatatttgataaat-gattgagtctctc--aaacatgttgtattag 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||  |||||  |||||||||| |  |||||||||||||||     
T  26609972 tgttatttacttgaaattattgctttgcaaatatggataccgaataattttctacatatttcgtaaatatattgagtctcccaaaaacatgttgtattaa 26610071  T
Q  98 tcctaatttaagttatagatacaaaaaggtcatagctggattttttacaactgcaacac 156  Q
    | || ||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  26610072 ttctgatttaggttatagatacaaaaaggtcataactggattttctacgactgcaacac 26610130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 36438543 - 36438392
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttct 354  Q
    |||||||||||||| || |||||   ||||||||||| ||||| || ||| ||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  36438543 tataatacccaccctcacttaaattaaaaaattacattttact-ctcttt-tttcttcagtacaggtatgagttttttctaggctctagttctactttct 36438446  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  36438445 ggacataaatttgatgctatcaaaccactatcaatttgtataatcacttaatca 36438392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 281 - 408
Target Start/End: Original strand, 9479027 - 9479150
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    |||||||||||||||||| |||||||||  |    |||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  9479027 aaaaattacatgttacttttttttctttaat----acacgtatgatttttttctaaactctagttctactttctggacataaatttgatgctatcaaacc 9479122  T
Q  381 accatcaatttgtataatcacttaatca 408  Q
    |||||||||||||||||| |||||||||    
T  9479123 accatcaatttgtataattacttaatca 9479150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 18895594 - 18895438
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttact---tctttttctttcttcggtacacgtatgagttttttctagactctagttctactt 351  Q
    ||||||||||||| |||||||||   |||||||||||||||||   | |||||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  18895594 tataatacccacctccatttaaattaaaaaattacatgttactctttttttttcttccttcgatacacgtatgagttttttctagactcgagttctactt 18895495  T
Q  352 tctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
      | ||||||||||||||| ||| ||||||| || |||||||||||||| |||||||    
T  18895494 attagacataaatttgatgttatcaaaccactattaatttgtataatcaattaatca 18895438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 408
Target Start/End: Original strand, 32956670 - 32956798
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttct-agactctagttctactttctcgacataaatttgatgctataaaac 379  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||| ||||||||| ||||||||| ||||    
T  32956670 aaaaaatatatgttacttctttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaac 32956769  T
Q  380 caccatcaatttgtataatcacttaatca 408  Q
    ||||  |||||| |||||||| |||||||    
T  32956770 cacccccaatttttataatcatttaatca 32956798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 26623121 - 26623240
Alignment:
Q  8 tacttgaaattattgctttggaaatatggataccgaataattttctgtatatttgataaatgattgagtctctcaaacatgttgtattagtcctaattta 107  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||||||| ||| |||   || |||||    
T  26623121 tacttaaaattattgctttggaaatatggataacaaataattttctacatatttgataaatgattgagtctctcaaacatggtgtgttacctctgattta 26623220  T
Q  108 agttatagatacaaaaaggt 127  Q
     |||||||||||||||||||    
T  26623221 ggttatagatacaaaaaggt 26623240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 406
Target Start/End: Original strand, 7366618 - 7366708
Alignment:
Q  316 acacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaat 406  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||| ||||| |||||||    
T  7366618 acacgtatgagttttttctatactctagttccactttctggacataaatttgatgatattaaaccaccatcaatttgaataattacttaat 7366708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 408
Target Start/End: Original strand, 30739029 - 30739146
Alignment:
Q  292 gttacttctttttctttcttcggtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatt 390  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||||| || | |||| |||||| |||||||||  |||||||| |||||| | ||||||    
T  30739029 gttacttctttttcttttttcggtacacgtttgagtttttttctagattccaattctcctttctggacataaatcggatgctatcaaaccatcttcaatt 30739128  T
Q  391 tgtataatcacttaatca 408  Q
    | ||||||||||||||||    
T  30739129 tttataatcacttaatca 30739146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 25061809 - 25061926
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||||||||||||||||||||||||||||| | | |||||| |||||||||||||| |||| | ||||||||| ||||||||| |||| |   |||||    
T  25061809 atgttacttctttttctttcttcggtacacgttttaatttttt-tagactctagttcttctttttggacataaatctgatgctatcaaactattctcaat 25061907  T
Q  390 ttgtataatcacttaatca 408  Q
    ||||| |||||||| ||||    
T  25061908 ttgtacaatcactttatca 25061926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 41908081 - 41908201
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgag-ttttttctagactctagttct-actttctcgacataaatttgatgctataaaaccaccatca 387  Q
    ||||||||||||||||||||||||||||| || |||| |||||||| |||||| ||||| | ||| | ||||||||| ||||||| | ||||||||  ||    
T  41908081 atgttacttctttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattttttggacataaatctgatgctttcaaaccacctcca 41908180  T
Q  388 atttgtataatcacttaatca 408  Q
    ||||||| |||||||||||||    
T  41908181 atttgtacaatcacttaatca 41908201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 405
Target Start/End: Complemental strand, 40841414 - 40841289
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    ||||| || ||||| ||||||||||||||||| ||||| || |||||||||||||||||||| || | |||| | ||||||||| ||||| ||| |||||    
T  40841414 aaaaaatatatgtttcttctttttctttcttcagtacatgtttgagttttttctagactctaattattctttttggacataaatatgatgttatcaaacc 40841315  T
Q  381 accatc-aatttgtataatcacttaa 405  Q
    |||  | |||||||||||| ||||||    
T  40841314 acctcctaatttgtataattacttaa 40841289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 259 - 408
Target Start/End: Complemental strand, 18015774 - 18015623
Alignment:
Q  259 taatacccacccccatttaaagaaaaattacat--gttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcg 356  Q
    ||||||||||||||| ||||| ||||| || ||  ||||  || |||||||||||  ||||| || ||||||||||||||||||||||| | |||| |      
T  18015774 taatacccacccccacttaaataaaaaatatatatgttatatccttttctttctttagtacatgtttgagttttttctagactctagttttcctttttgt 18015675  T
Q  357 acataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  18015674 acataaatcggatcctatcaaaccacccctaatttgtataatcacttaatca 18015623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 408
Target Start/End: Original strand, 33909980 - 33910087
Alignment:
Q  302 tttctttcttcggtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| |||| |  |||||||| |||| |||| ||| ||||   |||||||||||||     
T  33909980 tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatttgtataatcg 33910079  T
Q  401 cttaatca 408  Q
    ||||||||    
T  33910080 cttaatca 33910087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 26617196 - 26617250
Alignment:
Q  41 cgaataattttctgtatatttgataaatgattgagtctctcaaacatgttgtatt 95  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  26617196 cgaataattttctatatatttgataaatgattgagtcgctcaaacatgttgtatt 26617250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 26282676 - 26282583
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||||| || |||  |||||||| || | |||| ||||||||  |||||||||||||||||||||||    
T  26282676 tacacgtttgagttttttctagactttagttctcctatctgcacataaatctggtactatcaaaccacccccaatttgtataatcacttaatca 26282583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 1365939 - 1366032
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||| ||||||||| ||||||| || ||| |||||||||||| | |||| ||||||| | ||||| ||||||| |||||||||    
T  1365939 tacacgtttgagtttcttctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatca 1366032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 40001830 - 40001737
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||| |||||||||||| ||||||| || |||  |||||||| || | |||| ||||||||  |||||||||||||||||||||||    
T  40001830 tacacgtttgaggtttttctagactttagttcttctatctgaacataaatctggtactatcaaaccacctccaatttgtataatcacttaatca 40001737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 408
Target Start/End: Complemental strand, 36796520 - 36796413
Alignment:
Q  302 tttctttcttcggtacacgtatgagttttttctagac-tctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    ||||||||||  |||||||| |||||||||||||||| ||||||||| |||| |  ||||||||  ||| |||| |||| ||| | |||||||||||| |    
T  36796520 tttctttctttagtacacgtttgagttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaactacccttaatttgtataataa 36796421  T
Q  401 cttaatca 408  Q
    ||||||||    
T  36796420 cttaatca 36796413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 6380234 - 6380125
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt--ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||| ||||||  |||||||| ||||||||||  ||||||||||||||| |||| |  |||| ||| |||| |||| ||||||||   ||||||||||||    
T  6380234 ttttatttctttagtacacgtttgagttttttttctagactctagttcttctttttgtacatgaatctgatcctatcaaaccacccctaatttgtataat 6380135  T
Q  399 cacttaatca 408  Q
    ||||||||||    
T  6380134 cacttaatca 6380125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 352
Target Start/End: Complemental strand, 12251536 - 12251485
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctacttt 352  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||| ||||    
T  12251536 ttttctttctttagtacacgtttgagttttttctagactctagttctccttt 12251485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 44894165 - 44894070
Alignment:
Q  314 gtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||| |||||||||| ||||||| ||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  44894165 gtacacgtttgagtttttttctagactatagttcttctttttgtacataaatcggatcctattaaaccacccctaatttgtataatcacttaatca 44894070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 41852466 - 41852365
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    ||||| || ||||||||| ||||||| ||||   ||||||| || |||||||||||||| ||||||| |||||  ||  ||||| || ||||||||||||    
T  41852466 aaaaaatatatgttacttatttttctctctttaatacacgtttgggttttttctagactttagttctcctttcaggatgtaaatatggtgctataaaacc 41852367  T
Q  381 ac 382  Q
    ||    
T  41852366 ac 41852365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 403
Target Start/End: Original strand, 42311943 - 42312027
Alignment:
Q  318 acgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcactt 403  Q
    |||| |||||||||||||||||||| ||||  ||||| ||||||||| ||||| ||  |||| ||| || ||||||||||||||||    
T  42311943 acgtttgagttttttctagactctaattctcttttctggacataaatctgatgtta-caaactaccctcgatttgtataatcactt 42312027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 8358443 - 8358335
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttt-tctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  ||| |||| ||||||||| |||||||| ||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||| |||||||    
T  8358443 ttttctttctttagtatacgtttgagtttttctctagactttagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttatataatc 8358344  T
Q  400 acttaatca 408  Q
    |||||||||    
T  8358343 acttaatca 8358335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 42161271 - 42161161
Alignment:
Q  301 ttttctttcttcggtacacgtatgag-ttttttctagactctagttctactttctcgacataaatttgatgctata--aaaccaccatcaatttgtataa 397  Q
    |||||||||||  |||||||| |||| |||||||||||||||| ||||  ||| |  ||||||||| ||| |||||  ||||||||   |||||||||||    
T  42161271 ttttctttctttagtacacgtttgagtttttttctagactctaattctcatttttgtacataaattggatcctatatcaaaccacccctaatttgtataa 42161172  T
Q  398 tcacttaatca 408  Q
    |||||| ||||    
T  42161171 tcacttgatca 42161161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 4099883 - 4099991
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt--ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||||||||  |||||||| ||||||||||  |||||| ||| |||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||||    
T  4099883 ttttctttctttagtacacgtttgagttttttttctagacgctaattctcctttttgtacataaatcggat-ctatcaaaccacccctaatttgtataat 4099981  T
Q  399 cacttaatca 408  Q
    ||||||||||    
T  4099982 cacttaatca 4099991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 406
Target Start/End: Complemental strand, 33419267 - 33419161
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||   ||||||| |||||||||| |||||||||||||||  ||| |  ||||||||  ||| |||| |||| |||   |||||||||||||    
T  33419267 ttttctttctttaatacacgtttgagtttttttctagactctagttcttgtttttgtacataaatcggatcctatcaaactacccctaatttgtataatc 33419168  T
Q  400 acttaat 406  Q
    |||||||    
T  33419167 acttaat 33419161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26652271 - 26652214
Alignment:
Q  1 tgttatttacttgaaattattgctttggaaatatggataccgaataattttctgtata 58  Q
    |||||||||| | ||||||| | || ||||||||||||||| ||||||||||| ||||    
T  26652271 tgttatttacattaaattatcgtttgggaaatatggataccaaataattttctttata 26652214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26640541 - 26640602
Alignment:
Q  1 tgttatttacttgaaattattgctttggaa----atatggataccgaataattttctgtata 58  Q
    ||||||||||||||||||||| ||| ||||    ||||||||||| ||||||||||| ||||    
T  26640541 tgttatttacttgaaattatttcttgggaaatatatatggataccaaataattttctttata 26640602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 38525097 - 38525145
Alignment:
Q  298 tctttttctttcttcggtacacgtatgag-ttttttctagactctagtt 345  Q
    ||||||||||||||  |||||||| |||| |||||||||||||||||||    
T  38525097 tctttttctttctttagtacacgtttgagtttttttctagactctagtt 38525145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 253 - 408
Target Start/End: Complemental strand, 36060103 - 36059946
Alignment:
Q  253 taagtataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctact 350  Q
    ||||||| ||||||||||||| |||||   ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  36060103 taagtatgatacccacccccacttaaattaaaaaattacatgttacttctttttctttctttggtacgcgtataagttttttctagactctagttctact 36060004  T
Q  351 ttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    || | |||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  36060003 ttttagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatca 36059946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 257 - 408
Target Start/End: Original strand, 39081269 - 39081421
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttct 354  Q
    ||||||||||| ||||| |||||   ||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  39081269 tataatacccatccccacttaaattaaaaaattacatgttact-ctttttttttcttcagtacacgtatgagttttttctagactctagttttactttct 39081367  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39081368 ggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatca 39081421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 257 - 408
Target Start/End: Original strand, 1418781 - 1418932
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttct 354  Q
    ||||||||||||||||||| |||   |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| |    
T  1418781 tataatacccacccccattaaaattaaaaaattacatgttacttttttttctt-cttcagtacacgtatgagttttttctagactctagttctacttttt 1418879  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  1418880 agacat-aatttgatgctatcaaaccaccatcaatttgtataatcacttaatca 1418932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 252 - 388
Target Start/End: Complemental strand, 32186349 - 32186211
Alignment:
Q  252 ttaagtataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctac 349  Q
    |||||||||||| ||||||||| |||||   |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  32186349 ttaagtataatatccacccccaattaaattaaaaaattacatgttacttctttttctttcttcggcacatatatgagttttttctagactctagttctac 32186250  T
Q  350 tttctcgacataaatttgatgctataaaaccaccatcaa 388  Q
    ||| | ||||||||||||||||||| |||||||||||||    
T  32186249 tttttagacataaatttgatgctatcaaaccaccatcaa 32186211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 281 - 408
Target Start/End: Original strand, 38599298 - 38599425
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||| ||||||| ||| | || |||||||||||||||| ||| |    
T  38599298 aaaaattacatgttacttctttttctttcttcggtacaactatgagttttttcttaactcaagttctattttatggatataaatttgatgctatcaaatc 38599397  T
Q  381 accatcaatttgtataatcacttaatca 408  Q
    |  |||||||||||||||||||||||||    
T  38599398 attatcaatttgtataatcacttaatca 38599425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 406
Target Start/End: Original strand, 13997244 - 13997335
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaat 406  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||||||||||||||||  ||||||| |||||||| |||||||||||||    
T  13997244 tacacgtatgagtttttcctagactctagtttcactttctggacataaatttgatgctattgaaccaccgtcaatttgaataatcacttaat 13997335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 27302724 - 27302570
Alignment:
Q  252 ttaagtataatacccacccccatttaaagaaaaat-tacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctact 350  Q
    |||||| |||||||||| |||| ||||| |||||  |||||||||||| |||||||||  |||  |||| | |||||||||||||||||||| |||| ||    
T  27302724 ttaagtctaatacccacgcccacttaaataaaaaaatacatgttacttttttttcttt--tcgaaacacatttgagttttttctagactctaattcttct 27302627  T
Q  351 ttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatc 407  Q
     ||| |||| ||||| |||||||  ||| |||| |||||||||||||||||||||||    
T  27302626 gtctggacaaaaattcgatgctaccaaatcaccctcaatttgtataatcacttaatc 27302570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 299 - 404
Target Start/End: Complemental strand, 29480787 - 29480682
Alignment:
Q  299 ctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||| || |||| ||| |||||||| |||||| |||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||||||| ||||     
T  29480787 cttttttttccttcagtagacgtatgatttttttttagactttagttcaactttctggacataaatttgatgctattaaaccaccatcaatttgaataaa 29480688  T
Q  399 cactta 404  Q
    ||||||    
T  29480687 cactta 29480682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 1226408 - 1226308
Alignment:
Q  306 tttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaa 405  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||  | ||||||||| ||||||||  |||||||| ||||||| |||||||||| ||    
T  1226408 tttcttcggtacacgtttgagttttttctagactctaattctcctt--tggacataaatctgatgctaccaaaccaccctcaatttatataatcactcaa 1226311  T
Q  406 tca 408  Q
    |||    
T  1226310 tca 1226308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 406
Target Start/End: Complemental strand, 42411706 - 42411601
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||    
T  42411706 ttttctttctttagtacacgtttgagttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatca 42411607  T
Q  401 cttaat 406  Q
    ||||||    
T  42411606 cttaat 42411601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 2063721 - 2063828
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||||||| |||| |||||||||| |||||||||||| | |||| |  |||||||| | || |||| ||||||||   ||||||||||||||    
T  2063721 ttttctttcttcggtatacgtttgagttttttttagactctagttttcctttttgtacataaatataatcctatcaaaccacccctaatttgtataatca 2063820  T
Q  401 cttaatca 408  Q
    ||||||||    
T  2063821 cttaatca 2063828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 45042303 - 45042412
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt--ctagactctagttctactttctcg-acataaatttgatgctataaaaccaccatcaatttgtataa 397  Q
    |||||||||||| ||| |||| ||||||||||  ||||||||||||||| |||| ||| ||||||||||||| |||| ||||||||   |||||||||||    
T  45042303 ttttctttcttcagtatacgtttgagttttttttctagactctagttcttcttt-tcgtacataaatttgatcctatcaaaccacccctaatttgtataa 45042401  T
Q  398 tcacttaatca 408  Q
    |||||||||||    
T  45042402 tcacttaatca 45042412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 13001556 - 13001658
Alignment:
Q  297 ttctttttctttcttcggtacacgtat-gagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtat 395  Q
    |||||||||||| ||||||| |||| | |||||||||||| |||||| |||| |||| |  |||||||||||||||||| ||||||||  ||||||||||    
T  13001556 ttctttttcttttttcggtatacgttttgagttttttctaaactctaattctcctttttatacataaatttgatgctatcaaaccacccccaatttgtat 13001655  T
Q  396 aat 398  Q
    |||    
T  13001656 aat 13001658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 408
Target Start/End: Complemental strand, 34062007 - 34061897
Alignment:
Q  298 tctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataa 397  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||| |  |||||||| || | |||| ||||||||   ||||||||| |    
T  34062007 tctttttctttcttcagtacacgtatgagttttttttagactatagttcttctttttgtacataaatctggtcctatcaaaccacccataatttgtatga 34061908  T
Q  398 tcacttaatca 408  Q
    | |||||||||    
T  34061907 ttacttaatca 34061897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 408
Target Start/End: Original strand, 7993503 - 7993655
Alignment:
Q  259 taatacccaccccc-atttaaagaaaaattacat--gttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctc 355  Q
    |||||||||||||| ||||||| ||||| || ||  ||||  || |||||||||||  |||||| | ||||||||||||||||||||||||| |||| |     
T  7993503 taatacccaccccctatttaaataaaaaatatatatgttatatccttttctttctttagtacacatttgagttttttctagactctagttctcctttttg 7993602  T
Q  356 gacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     |||||||   ||| |||| ||||||||   ||||||||||||||||||||||    
T  7993603 tacataaaccggatcctatcaaaccacccctaatttgtataatcacttaatca 7993655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 19367568 - 19367460
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  19367568 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggattctatcaaaccacccctaatttgtataatc 19367469  T
Q  400 acttaatca 408  Q
    |||||||||    
T  19367468 acttaatca 19367460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 408
Target Start/End: Complemental strand, 31273364 - 31273207
Alignment:
Q  252 ttaagtataatacccacccccatttaaagaaaaattacat--gttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctac 349  Q
    |||||| ||||||||||||||| | ||| ||||| || ||  ||||| || |||||||||||  ||| || | |||||||||| || |||| || ||| |    
T  31273364 ttaagtttaatacccacccccactcaaataaaaaatatatatgttacatcattttctttctttagtatacatttgagttttttgtatactccagctctcc 31273265  T
Q  350 tttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||| ||| ||||||||||| ||| ||||||||  ||||||||||||||| |||||||    
T  31273264 tttctggacttaaatttgatgttatcaaaccacc-ccaatttgtataatcatttaatca 31273207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 408
Target Start/End: Complemental strand, 26151941 - 26151788
Alignment:
Q  259 taatacccacccccatttaaagaaaaattacat--gttacttctttttctttcttcggtacacgtatgagtttttt-ctagact-ctagttctactttct 354  Q
    ||||||||||||||||||||| ||||| || ||  ||||  || |||||||||||  ||| |||| |||||||||| ||||||| |||||||| |||| |    
T  26151941 taatacccacccccatttaaataaaaaatatatatgttatatccttttctttctttagtatacgtttgagtttttttctagacttctagttctccttttt 26151842  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
      ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  26151841 gtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatca 26151788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 408
Target Start/End: Original strand, 13020292 - 13020446
Alignment:
Q  259 taatacccacccccatttaaagaaaaat---tacatgttacttctttttctttcttcggtacacgtatgagtttt--ttctagactctagttctactttc 353  Q
    ||||||||||||||| ||||| |||||    || ||||||  || |||||||||||  |||||||| ||||||||  |||||||||||||||||  |||     
T  13020292 taatacccacccccacttaaataaaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctcttttt 13020391  T
Q  354 tcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |  ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  13020392 tgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatca 13020446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 21747364 - 21747271
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||| |||||||||||| ||||||| || |||  |||||||| || | |||| ||||||||  |||||||||||||||||||||||    
T  21747364 tacacgtttgaggtttttctagactttagttcttctatctgaacataaatctggtactatcaaaccacccccaatttgtataatcacttaatca 21747271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 45618892 - 45619000
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagact-ctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  ||| |||| ||||||||||||||||| |||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  45618892 ttttctttctttagtatacgtttgagttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 45618991  T
Q  400 acttaatca 408  Q
    |||||||||    
T  45618992 acttaatca 45619000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 18916188 - 18916095
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||| |||||||||||| ||||||| |  ||| ||||||||| || | |||| |||||| |  |||||||||||||||||||||||    
T  18916188 tacacgtttgaggtttttctagactttagttcttcaatctggacataaatctggtactatcaaaccatccccaatttgtataatcacttaatca 18916095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 38985842 - 38985750
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||| ||| || |||| || ||| |||||||||||| | |||| ||||||||  ||||||||||||||| |||||||    
T  38985842 tacacgtttgagttttttctaaacttta-ttctcctatctggacataaatttggtactatcaaaccacctccaatttgtataatcatttaatca 38985750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 18676460 - 18676352
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||||| |||| |  ||||||||  ||| |||| |||| |||   ||||||||||||     
T  18676460 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaactacccctaatttgtataata 18676361  T
Q  400 acttaatca 408  Q
    |||||||||    
T  18676360 acttaatca 18676352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 41096687 - 41096579
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||| | |||||||||| ||||||||||||||| |||| |  ||||||||  ||| |||| ||| ||||   |||||||||||||    
T  41096687 ttttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccctaatttgtataatc 41096588  T
Q  400 acttaatca 408  Q
    |||||||||    
T  41096587 acttaatca 41096579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 15457430 - 15457523
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactt-tctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| |||||| |||| ||  ||||||||| || | |||| |||| |||  |||||||||||||||||||||||    
T  15457430 tacacgtttgagttttttctagactttagttc-acttatccggacataaatctggtactatcaaactacccccaatttgtataatcacttaatca 15457523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 6530601 - 6530682
Alignment:
Q  327 ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||||||||||||||||  ||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  6530601 ttttttctagactctagttctcatttttgtacataaatcggatactatcaaaccacccctaatttgtataatcacttaatca 6530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 9029519 - 9029625
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||| |||||||| |||  |||||| | || |||||||||| ||||||||| |||| |||||| ||||||||| || |||||| ||| || |  ||||    
T  9029519 atgttatttcttttttttt--tcggtatatgtttgagttttttttagactctaattctcctttctagacataaatatgttgctatcaaagcagccccaat 9029616  T
Q  390 ttgtataat 398  Q
    |||||||||    
T  9029617 ttgtataat 9029625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 18173073 - 18172981
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| || |||| || | | ||||||||| || | |||| ||||||||   ||||||||||||||||||||||    
T  18173073 tacacgtttgagttttttctagacttta-ttctcctatatggacataaatctggtactatcaaaccacccctaatttgtataatcacttaatca 18172981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 12269341 - 12269448
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||| ||||||  |||||| | ||| |||||| ||||||||||||||  ||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||    
T  12269341 ttttttttctttagtacacatttgaattttttttagactctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtataatca 12269440  T
Q  401 cttaatca 408  Q
    ||||||||    
T  12269441 cttaatca 12269448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 400
Target Start/End: Complemental strand, 17117771 - 17117686
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    ||||||| ||| ||||||||||| | ||| ||| || ||| ||||||||| || | |||| ||||||||  |||||||||||||||    
T  17117771 tacacgtttgaattttttctagattttagctctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatca 17117686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 406
Target Start/End: Original strand, 36481321 - 36481425
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    ||||||||||| | ||||| | ||||||| || ||||||||| |||| |||| |  ||||||||| ||| || | ||||||||   ||||||||||||||    
T  36481321 ttttctttcttag-tacacatttgagtttcttttagactctaattctcctttttgtacataaattggatcctttcaaaccacccctaatttgtataatca 36481419  T
Q  401 cttaat 406  Q
    ||||||    
T  36481420 cttaat 36481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 18482600 - 18482548
Alignment:
Q  356 gacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||  |||| |||  |||||||||||||| ||||||||    
T  18482600 gacataaatttgatgctaacaaactacccccaatttgtataatcgcttaatca 18482548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 9e-46; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 257 - 408
Target Start/End: Original strand, 22423558 - 22423707
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttct 354  Q
    ||||||||||||||||| ||| |   |||||||| ||||||||| |||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  22423558 tataatacccacccccacttatattaaaaaattatatgttacttttttttcttt----ggtacacgtatgagttttttctagactctagttctactttct 22423653  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     ||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  22423654 ggacataaatttgatgctatcaaaccaccatcaatttgtatgatcacttaatca 22423707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 43154983 - 43154829
Alignment:
Q  257 tataatacccacccccatttaaagaaaaa-ttacatgttacttcttttt--ctttcttcggtacacgtatgagttttttctagactctagttctactttc 353  Q
    |||||||||||||||  |||||  ||||| ||||||||||||| |||||  |||||||  | |||||||||||||||||||||| ||||||||||||||     
T  43154983 tataatacccaccccactttaattaaaaaattacatgttacttttttttttctttctttaggacacgtatgagttttttctagattctagttctactttt 43154884  T
Q  354 tcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43154883 tggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatca 43154829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 24449019 - 24449148
Alignment:
Q  281 aaaaattacatgttac-ttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaac 379  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  24449019 aaaaattacatgttacattttttttctttcttcagtacacgtatgagttttttctagactctagttctactttctggatataaatttgatgctatcaaac 24449118  T
Q  380 cac--catcaatttgtataatcacttaatc 407  Q
    |||   ||||||||||||||||||||||||    
T  24449119 cactatatcaatttgtataatcacttaatc 24449148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 281 - 408
Target Start/End: Complemental strand, 35654146 - 35654021
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    ||||||||||||| |||| |||||  | ||||  |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  35654146 aaaaattacatgtaactttttttt--tccttcactacacgtatgagttttttctagactctagttctactttctggacataaatatgatgctatcaaacc 35654049  T
Q  381 accatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||||||||||||    
T  35654048 accatcaatttgtataatcacttaatca 35654021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 290 - 408
Target Start/End: Complemental strand, 21791706 - 21791588
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||||||||||||||||| || ||||| || ||||||||||||||||||||||||| ||||||  ||||||||||||||| || |||||||| |||||    
T  21791706 atgttacttctttttctttcatcagtacatgtttgagttttttctagactctagttctcctttctgaacataaatttgatgccatcaaaccaccttcaat 21791607  T
Q  390 ttgtataatcacttaatca 408  Q
     ||||||||||||||||||    
T  21791606 gtgtataatcacttaatca 21791588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 407
Target Start/End: Original strand, 5545244 - 5545351
Alignment:
Q  300 tttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    ||||| ||| |||||  ||||| |||||||||||||||||||| |||| || ||| |||||||||||||||| || ||||||||| ||||||||||||||    
T  5545244 ttttttttttttcggagcacgtttgagttttttctagactctaattcttctgtctggacataaatttgatgccatcaaaccaccaccaatttgtataatc 5545343  T
Q  400 acttaatc 407  Q
    ||||||||    
T  5545344 acttaatc 5545351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 408
Target Start/End: Original strand, 53011585 - 53011735
Alignment:
Q  259 taataccca-cccccatttaaagaaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcga 357  Q
    ||||||||| |||||||||||| ||||| || ||||||  || |||||||||||  |||||||| ||||||||||||| |||||| |||| |||| |  |    
T  53011585 taatacccatcccccatttaaataaaaaatatatgttatatcattttctttctttagtacacgtttgagttttttctaaactctaattctcctttttgta 53011684  T
Q  358 cataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  53011685 cataaatcagatcctatcaaaccacccctaatttgtataatcacttaatca 53011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 301 - 406
Target Start/End: Original strand, 27632313 - 27632419
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||| |||||||| |||||||| ||||||| ||||||||| |||| |  ||||||||||||| |||| ||||||||   |||||||||||||    
T  27632313 ttttctttcttcagtacacgtttgagtttttttctagattctagttctcctttttgtacataaatttgatcctatcaaaccacccctaatttgtataatc 27632412  T
Q  400 acttaat 406  Q
    |||||||    
T  27632413 acttaat 27632419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 19661295 - 19661402
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||  ||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||    
T  19661295 ttttctttctttagtacacgtttgagttttttctagactctagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataatca 19661394  T
Q  401 cttaatca 408  Q
    ||||||||    
T  19661395 cttaatca 19661402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 26329189 - 26329081
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||||| || |||| |||  | ||||||||| ||||||||  ||||||||  ||||    
T  26329189 atgttacttctttttctttctttggtacacgtttgaattttttctagactgtaattctcctt--tggacataaatctgatgctaccaaaccacctccaat 26329092  T
Q  390 ttgtataatca 400  Q
    || ||||||||    
T  26329091 ttatataatca 26329081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 32130938 - 32130831
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||  |||| ||| |||||||||||||||| |||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||    
T  32130938 ttttctttctttagtacccgtttgagttttttctagacactagttcttctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatca 32130839  T
Q  401 cttaatca 408  Q
    ||||||||    
T  32130838 cttaatca 32130831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 45172778 - 45172686
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||||| |  ||| ||||||||| || | |||| |||||||| | ||||||||||||||||||||||    
T  45172778 tacacgtttgagttttttctagactttagttctccaatctggacataaatctggtactatcaaaccaccct-aatttgtataatcacttaatca 45172686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 408
Target Start/End: Complemental strand, 10575647 - 10575564
Alignment:
Q  322 atgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||||||||| |||||||||||  |||    |||||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  10575647 atgagttttttctaaactctagttctttttta---acataaattttatgctatcaaaccaccctcaacttgtataatcacttaatca 10575564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 16072509 - 16072617
Alignment:
Q  301 ttttctttcttcggtacacgtatgag-ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    ||||||||||||||||||||| |||| |||||||||  |||||| ||| |||| |  ||||||||||||| |||| |||||| |   |||||||||||||    
T  16072509 ttttctttcttcggtacacgtttgagtttttttctaagctctagatctcctttttgtacataaatttgatcctatcaaaccatccctaatttgtataatc 16072608  T
Q  400 acttaatca 408  Q
    | |||||||    
T  16072609 atttaatca 16072617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 23426315 - 23426207
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  ||| |||| |||||||||| ||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  23426315 ttttctttctttagtatacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataatc 23426216  T
Q  400 acttaatca 408  Q
    |||||||||    
T  23426215 acttaatca 23426207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 34982154 - 34982247
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||| | || ||| ||||||||| || | |||  |||||| |  |||||||||||||||||||||||    
T  34982154 tacacgtttgagttttttctagactttagtttttctatctggacataaatctggtactaacaaaccatccccaatttgtataatcacttaatca 34982247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 55134138 - 55134231
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||||||||| |||||| |||||||  | ||| |||||||||||| | |||| ||||||| | ||||| ||||||| |||||||||    
T  55134138 tacacgtttgagttttttgtagactttagttctcttatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatca 55134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 28463737 - 28463629
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  ||| |||| |||||||||| ||||||||||||||| |||| |  ||||||||  |||  ||| ||||||||   |||||||||||||    
T  28463737 ttttctttctttagtaaacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcttatcaaaccacccctaatttgtataatc 28463638  T
Q  400 acttaatca 408  Q
    |||||||||    
T  28463637 acttaatca 28463629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 48512390 - 48512330
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactct 341  Q
    ||||| || |||||| |||||||||||||||  |||||||| |||||||||||||||||||    
T  48512390 aaaaaatatatgttatttctttttctttctttagtacacgtttgagttttttctagactct 48512330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 406
Target Start/End: Original strand, 21168972 - 21169078
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||| ||||||||||||||||| |||| |  ||||||||  ||| |||| ||| ||||   |||||||||||||    
T  21168972 ttttctttcttttgtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaatcacccctaatttgtataatc 21169071  T
Q  400 acttaat 406  Q
    | |||||    
T  21169072 aattaat 21169078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 11681892 - 11681783
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctac-tttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||||| | ||| |  ||||||||  ||| |||| ||||||||   ||||| ||||||    
T  11681892 ttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccacccctaatttttataat 11681793  T
Q  399 cacttaatca 408  Q
    ||||||||||    
T  11681792 cacttaatca 11681783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 11690171 - 11690062
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctac-tttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||||| | ||| |  ||||||||  ||| |||| ||||||||   ||||| ||||||    
T  11690171 ttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccacccctaatttttataat 11690072  T
Q  399 cacttaatca 408  Q
    ||||||||||    
T  11690071 cacttaatca 11690062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 405
Target Start/End: Complemental strand, 29221770 - 29221665
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    ||||||||||||  | ||||| |||||||||| |||||||||| ||||  ||| |  |||||||| |||| |||| |||||||  | |||||||||||||    
T  29221770 ttttctttcttcatttcacgtttgagtttttttctagactctaattctcgtttttgtacataaatctgatcctatcaaaccactcttaatttgtataatc 29221671  T
Q  400 acttaa 405  Q
    ||||||    
T  29221670 acttaa 29221665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 29579823 - 29579903
Alignment:
Q  328 tttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||||| ||| |  |||||||| |||| |||| ||||||||   |||||||||||| | |||||||    
T  29579823 tttttctagactctagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatca 29579903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 23256511 - 23256617
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    ||||||||||| | ||||| | |||||||||| ||||||| |||||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||| ||    
T  23256511 ttttctttcttag-tacacatttgagttttttttagactccagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataacca 23256609  T
Q  401 cttaatca 408  Q
    ||||||||    
T  23256610 cttaatca 23256617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 283 - 408
Target Start/End: Original strand, 138043 - 138167
Alignment:
Q  283 aaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccac 382  Q
    |||||||||||||||| |||||||| |||| | |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||    
T  138043 aaattacatgttacttttttttctt-cttctggacacgtatgagttttttctagactctagttctacttttcggacataaatttgatgctatcaaaccac 138141  T
Q  383 catcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||||||||||    
T  138142 catcaatttgtataatcacttaatca 138167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 281 - 408
Target Start/End: Original strand, 16515424 - 16515547
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    |||||||||||||||||| ||||||||    | ||||||||||||| ||||| || ||| |||||||||||||| ||||||||||||||||||| ||| |    
T  16515424 aaaaattacatgttacttttttttctt----cagtacacgtatgagctttttttaaactttagttctactttctagacataaatttgatgctattaaaac 16515519  T
Q  381 accatcaatttgtataatcacttaatca 408  Q
    |||||||||||  |||||||||||||||    
T  16515520 accatcaattttaataatcacttaatca 16515547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 27351254 - 27351372
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||||||| |||||||||||| ||| |||| |||| |||||||||||||||||||| ||||||  ||||||||||| |||||| ||||||||  ||||    
T  27351254 atgttacttccttttctttcttcagtatacgtttgagatttttctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctccaat 27351353  T
Q  390 ttgtataatcacttaatca 408  Q
    |||||||| ||||||||||    
T  27351354 ttgtataaccacttaatca 27351372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 257 - 402
Target Start/End: Original strand, 10033421 - 10033563
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttct 354  Q
    ||||||||||||||||| |||||   |||||| || |||||    ||||| ||||||| | |||| |||||||||| |||||||||||||||||||||||    
T  10033421 tataatacccacccccacttaaattaaaaaatcacttgtta----tttttttttcttcaggacacatatgagtttt-tctagactctagttctactttct 10033515  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcact 402  Q
      |||||||||||||||||| ||||| |||||||||||||||||||||    
T  10033516 gtacataaatttgatgctatcaaacccccatcaatttgtataatcact 10033563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 408
Target Start/End: Original strand, 17325777 - 17325867
Alignment:
Q  318 acgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  17325777 acgtatgagttttttttagactctagttccactttctggacataaatttgatgctattaaactaccatcgatttgaataatcacttaatca 17325867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 23069125 - 23069243
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||||||||||||||||||||| ||||||| || ||||||| || |||||| |||| ||||||  |||||||| ||||||||  ||||||||  ||||    
T  23069125 atgttacttctttttctttcttcgttacacgtttgtgttttttttatactctaattctcctttctgaacataaatatgatgctagcaaaccacccccaat 23069224  T
Q  390 ttgtataatcacttaatca 408  Q
    |||||||||| ||||||||    
T  23069225 ttgtataatcccttaatca 23069243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 408
Target Start/End: Complemental strand, 8379680 - 8379562
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||||||||  ||||  ||| | ||||||||| ||||| ||| ||| ||||   |||    
T  8379680 atgttatttctttttctttcttcggtacacatttgagttttttctagactctcattctcatttatggacataaatatgatgttatcaaatcacccctaat 8379581  T
Q  390 ttgtataatcacttaatca 408  Q
    ||||||||| |||||||||    
T  8379580 ttgtataattacttaatca 8379562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 40956223 - 40956336
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||||||||||||||||||||     |||| ||||||||||||||||||||||||| |||| | ||||||||| |||||| || ||||   |  ||||    
T  40956223 atgttacttctttttctttcttc-----acgtttgagttttttctagactctagttctcctttgtggacataaatctgatgcaatcaaacattctccaat 40956317  T
Q  390 ttgtataatcacttaatca 408  Q
    |||||||||||||||||||    
T  40956318 ttgtataatcacttaatca 40956336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 43511548 - 43511641
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||||| || ||| ||||||||| || | |||| ||||||||  |||||||||||||||||||||||    
T  43511548 tacacgtttgagttttttctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatca 43511641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 5829315 - 5829408
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||||||||| |||||| ||||||| || ||| ||||||||| || | |||| |||||| | ||||||||||||||||||||||||    
T  5829315 tacacgtttgagttttttatagactttagttctcctatcttgacataaatctggtactatcaaaccaacctcaatttgtataatcacttaatca 5829408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 10591407 - 10591314
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||||| || |||  |||||||| || | |||| ||||||||  |||||||||||||||||||||||    
T  10591407 tacacgtttgagttttttctagactttagttctcctatctgaacataaatatggtactatcaaaccacccccaatttgtataatcacttaatca 10591314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 42292015 - 42291922
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||| ||||||||| ||| ||||||| || ||| |||||||||||| | |||| ||| ||||| |||||||||||||||||||||||    
T  42292015 tacacgtttgacttttttctaaactttagttctcctatctggacataaatttggtactatcaaatcaccaccaatttgtataatcacttaatca 42291922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 13656123 - 13656233
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatc---aatttgtataa 397  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||| |||| |  ||||||||  ||| ||| ||||  ||||||   |||||||||||    
T  13656123 ttttctttctttagtacacgtttgagttttttctagactctagttctcctttttgtacataaatcggatcctaaaaaaaaaccatccctaatttgtataa 13656222  T
Q  398 tcacttaatca 408  Q
    |||||||||||    
T  13656223 tcacttaatca 13656233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 4734708 - 4734623
Alignment:
Q  323 tgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||| ||||||| || ||| ||||||||| || | |||| ||||||||| |||||||||||||| ||| ||||    
T  4734708 tgagttttttctagactttagttctcctatctggacataaatctggtactatcaaaccaccaccaatttgtataatcccttgatca 4734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 20975927 - 20976008
Alignment:
Q  327 ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||| |||||||  | ||| |||||||||||| | |||| ||||||||| ||||||||||||||| |||||||    
T  20975927 ttttttctagactttagttctcttatcttgacataaatttggtactatcaaaccaccaccaatttgtataatcatttaatca 20976008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 26377925 - 26377819
Alignment:
Q  300 tttttctttcttcggtacacgtatgagtttttt--ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataa 397  Q
    ||||||||||||  |||||||| ||||||||||  ||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||    
T  26377925 tttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtataa 26377826  T
Q  398 tcactta 404  Q
    |||||||    
T  26377825 tcactta 26377819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 931283 - 931403
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagtttttt-----ctagactctagttctactttctcgacataaatttgatgctataaaaccacca 384  Q
    ||||||||||||||||||||||   |||| || ||||||||||     ||||||| |||||||  |||||  | |||||||||||||||| ||| |||      
T  931283 atgttacttctttttctttctt---tacatgtttgagttttttttcttctagactatagttctcttttctatatataaatttgatgctattaaatcacac 931379  T
Q  385 tcaatttgtataatcacttaatca 408  Q
     |||||||||||||||||||||||    
T  931380 ccaatttgtataatcacttaatca 931403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 17514070 - 17513977
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||| |||||||||||| ||||||| || ||| || |||||| || | |||  ||||||||  |||||||||||||||||||||||    
T  17514070 tacacgtttgaggtttttctagactttagttctcctatctggatataaatctggtactaacaaaccacccccaatttgtataatcacttaatca 17513977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 29156120 - 29156213
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||| | || |||  |||||||| || | |||| ||||||||   ||||||||||||||||||||||    
T  29156120 tacacgtttgagttttttctagactatagttatcctatctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatca 29156213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 40779130 - 40779206
Alignment:
Q  323 tgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    ||||||||||||||| ||||||||| ||||||  |||||||||||||| ||| |||| | |  ||||||||||||||    
T  40779130 tgagttttttctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatc 40779206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 12661208 - 12661263
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagtt 345  Q
    |||||| ||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  12661208 atgttatttcattttctttctttagtacacgtttgagttttttctagactctagtt 12661263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 408
Target Start/End: Original strand, 18873409 - 18873480
Alignment:
Q  341 tagttctactttctcgacataaatttgatgctataaaaccaccatc----aatttgtataatcacttaatca 408  Q
    ||||| ||||||||  |||||||||||||||||| |||||||||||    ||||||||||| ||||||||||    
T  18873409 tagttttactttctgaacataaatttgatgctatcaaaccaccatcaattaatttgtataaccacttaatca 18873480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 3349862 - 3349770
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||||| || ||| |||||||||||| | | || ||||||| | ||||| | ||||| |||||||||    
T  3349862 tacacgtttgagttttttctagactttagttctcctatctggacataaatttggtac-atcaaaccactaccaattggaataatgacttaatca 3349770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 26311948 - 26312029
Alignment:
Q  327 ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||| ||||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  26311948 ttttttctagattctagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaatca 26312029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 13474545 - 13474653
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||| ||||||  |||||||| |||||||||| ||| |||||||||||  ||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  13474545 ttttttttctttagtacacgtttgagtttttttctaaactctagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 13474644  T
Q  400 acttaatca 408  Q
    |||||||||    
T  13474645 acttaatca 13474653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 36718717 - 36718608
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt--ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||||| ||  |||||||| ||||||||||  ||||||||||||||| |||| |  |||| |||  ||| |||| ||||||||   ||||||||||||    
T  36718717 ttttctttttttagtacacgtgtgagttttttttctagactctagttctcctttttgtacatgaatcggatcctatcaaaccacccctaatttgtataat 36718618  T
Q  399 cacttaatca 408  Q
    || |||||||    
T  36718617 catttaatca 36718608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 19099436 - 19099355
Alignment:
Q  327 ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||| |||||| ||||||| |||| |  |||||||| |||| |||| |||||| |   ||||||||||||||||||||||    
T  19099436 ttttttttagactatagttctcctttttgtacataaatctgatcctatcaaaccatccctaatttgtataatcacttaatca 19099355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 281 - 408
Target Start/End: Complemental strand, 37873929 - 37873803
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaac 379  Q
    |||||||||||||||||| |||||  |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  37873929 aaaaattacatgttactttttttt--ttctccggtacacgtatgagtttttttctagactctagttctactttctagacataaatttgatgctatcaaac 37873832  T
Q  380 caccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||| |||||||||||    
T  37873831 caccatcaatttgtatagtcacttaatca 37873803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 252 - 408
Target Start/End: Complemental strand, 44836926 - 44836762
Alignment:
Q  252 ttaagtataatacccacccccatttaaagaaaaat--tacatgttacttctttttctttcttcggtacacgtatgagtttttt------ctagactctag 343  Q
    |||||||||||| | ||||||| |||||  |||||  ||||||||||||| ||||||||||||| ||||||||||||||||||      ||||| |||||    
T  44836926 ttaagtataatatctacccccacttaaattaaaatattacatgttacttcattttctttcttcgatacacgtatgagttttttttctttctagattctag 44836827  T
Q  344 ttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44836826 ttctactttctgaacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatca 44836762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 15441195 - 15441313
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| ||||||||| | ||||||| ||||||||  ||||    
T  15441195 atgttacttctttttctttcttcgatacacgtttgagttttttctagactctagttctcctttctagacataaatataatgctatcaaaccacctacaat 15441294  T
Q  390 ttgtataatcacttaatca 408  Q
    |||||||||||||||||||    
T  15441295 ttgtataatcacttaatca 15441313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 42740005 - 42740131
Alignment:
Q  281 aaaaattacatgttacttctttttct-ttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaac 379  Q
    |||||||||||||||||| ||||||| ||||||   ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  42740005 aaaaattacatgttacttttttttctcttcttcaagacatgtatgagttttttctagactctagttctactttctggacataagtttgatgctatcaaac 42740104  T
Q  380 caccatcaatttgtataatcacttaat 406  Q
     |||||||||||||||||| |||||||    
T  42740105 aaccatcaatttgtataataacttaat 42740131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 26486529 - 26486407
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    ||||||||||||||| || |||||||||     |||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||| |||||    
T  26486529 aaaaattacatgttatttttttttcttta----gtacacgtatgagttttttctaaactctagttctactttctggaaataaatttgatgctatcaaacc 26486434  T
Q  381 accatcaatttgtataatcacttaatc 407  Q
    | |||||||||||||||||||||||||    
T  26486433 atcatcaatttgtataatcacttaatc 26486407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 290 - 408
Target Start/End: Complemental strand, 27703688 - 27703570
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||  ||| |  |||||||||||||||||| ||||||||  ||||    
T  27703688 atgttacttctttttctttctttagtacacgtttgagttttttctagactctagttctcttttttgaacataaatttgatgctatcaaaccacccccaat 27703589  T
Q  390 ttgtataatcacttaatca 408  Q
    |||||||||||||||||||    
T  27703588 ttgtataatcacttaatca 27703570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 306 - 406
Target Start/End: Original strand, 24556727 - 24556827
Alignment:
Q  306 tttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaa 405  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  24556727 tttctttggtacacgtatgagttttttctagactctaattccactttctcaacataaatttggtgctattaaaccaccatcaatttgaataatcacttaa 24556826  T
Q  406 t 406  Q
    |    
T  24556827 t 24556827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 17674488 - 17674395
Alignment:
Q  314 gtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||||||||||||| |||||||||||||  ||||||| || |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  17674488 gtacacgtatgagttttt-ctagactctagtttcactttctagatataaatttgatgctattaaaccaccatcaatttgaataatcacttaatca 17674395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 22387026 - 22386878
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttct 354  Q
    ||||||||||||| ||| |||||   |||||||| ||||||||| |||||||     | ||||| | ||||||||||||||||||||||||| ||| |||    
T  22387026 tataatacccaccaccacttaaattaaaaaattatatgttacttttttttct-----cagtacatgaatgagttttttctagactctagttccactgtct 22386932  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     |||||||||||||||||||  |||||||||||||||| | |||||||||||||    
T  22386931 ggacataaatttgatgctatttaaccaccatcaatttgaacaatcacttaatca 22386878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 5560388 - 5560506
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| |||||| |||||||  ||||| ||||||||| || |||||  ||||||||  ||||    
T  5560388 atgttacttttttttctttcttcagtacacgtttgagatttttttagactatagttctcatttctggacataaatctggtgctaccaaaccacccccaat 5560487  T
Q  390 ttgtataatcacttaatca 408  Q
    |||||||||||||||||||    
T  5560488 ttgtataatcacttaatca 5560506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 394
Target Start/End: Original strand, 1269471 - 1269568
Alignment:
Q  297 ttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgta 394  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||||||  |||||||||    
T  1269471 ttctttttcttttttctgtacacgtttgagttttttctagactctaattctcctttctagacataaatctgatgctatgaaaccacccccaatttgta 1269568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 295 - 406
Target Start/End: Complemental strand, 31369542 - 31369432
Alignment:
Q  295 acttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgta 394  Q
    |||||||||||||||||||  ||| || ||||||||||||| |||||| |||| |||||| ||||||||| ||||| ||| |||||||  ||||||||||    
T  31369542 acttctttttctttcttcga-acatgtttgagttttttctaaactctaattctcctttctggacataaatctgatgttatcaaaccactttcaatttgta 31369444  T
Q  395 taatcacttaat 406  Q
    ||||||||||||    
T  31369443 taatcacttaat 31369432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 50371045 - 50371157
Alignment:
Q  296 cttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtat 395  Q
    |||||||||||||||||  ||| | | ||  ||| ||||||||||||||||| |||||| || ||||| |||||||||| ||| |||| |||||||||||    
T  50371045 cttctttttctttcttcaatacgcatttggatttcttctagactctagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtat 50371144  T
Q  396 aatcacttaatca 408  Q
    |||||||||||||    
T  50371145 aatcacttaatca 50371157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 12971336 - 12971429
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||||| || ||| ||||||||| ||||  ||| ||||||||  |||||||||||||||||||||||    
T  12971336 tacacgtttgagttttttctagactttagttctcctatctggacataaatctgatattatcaaaccacccccaatttgtataatcacttaatca 12971429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 408
Target Start/End: Original strand, 38263804 - 38263887
Alignment:
Q  325 agttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||||| ||||||| ||| ||||| || || |||||||||    
T  38263804 agttttttctagactctagttccactttttggacataaatttgatgctattaaaccactatcgatttgaattattacttaatca 38263887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 10109662 - 10109743
Alignment:
Q  327 ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||||| |||| |  ||||||||| ||| |||| |||||||||  ||||||||||||||||||||||    
T  10109662 ttttttctagactctagttctcctttttgtacataaattggatcctatcaaaccaccactaatttgtataatcacttaatca 10109743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 13121825 - 13121752
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctat 374  Q
    |||| ||||||| | |||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||    
T  13121825 ttttttttcttcagcacacgtatgagttttttctatactctagttccactttctggatataaatttgatgctat 13121752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 408
Target Start/End: Complemental strand, 6333684 - 6333557
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttt-tctagactctagttctactttctcgacataaatttgatgctataaaac 379  Q
    ||||| || ||||||||| |||||||||||||||||||||| ||||||||| | ||||||||||||||  || ||  |||||||| |||| |||| ||||    
T  6333684 aaaaaatatatgttacttatttttctttcttcggtacacgtttgagtttttctttagactctagttctcattcctgtacataaatctgatactatcaaac 6333585  T
Q  380 caccatcaatttgtataatcacttaatca 408  Q
    || | | ||| |||| |||||||||||||    
T  6333584 catcct-aatctgtaaaatcacttaatca 6333557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 25930518 - 25930627
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt--ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||||| |||||||||||| ||||||||||  |||||||||||||||  ||| |  |||||||| |||| |||| |||| |||   ||||||||||||    
T  25930518 ttttcttttttcggtacacgtttgagttttttgtctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataat 25930617  T
Q  399 cacttaatca 408  Q
    ||||||||||    
T  25930618 cacttaatca 25930627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 408
Target Start/End: Complemental strand, 29208297 - 29208139
Alignment:
Q  252 ttaagtataatacccacccccatttaaagaaaaat-tacatgttacttctttttctttcttcggtacacgtatg-agttttttctagactctagttctac 349  Q
    |||||| |||||| |||||||| ||||| |||||  || ||||||  || ||||||||||||||||||||| || | |||||||||||||||||||||      
T  29208297 ttaagtctaatactcacccccacttaaataaaaaaatatatgttatatccttttctttcttcggtacacgtttgaatttttttctagactctagttctct 29208198  T
Q  350 tttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||| |  |||||||| | ||  ||| ||||||||   |||||||||||||| |||||||    
T  29208197 tttttgtacataaatctaatcatatcaaaccacccctaatttgtataatcatttaatca 29208139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 406
Target Start/End: Original strand, 30899526 - 30899677
Alignment:
Q  259 taatacccacccccatttaaagaaaaattacat--gttacttctttttctttcttcggtacacgtatgagtttt--ttctagactctagttctactttct 354  Q
    ||||||||||||||| ||||| ||||| || ||  ||||  || |||||||||||  |||||||| ||||||||  ||||||||||||||||| |||| |    
T  30899526 taatacccacccccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctccttttt 30899625  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaat 406  Q
      ||||||||  ||| |||| ||| ||||   ||||||||||||||||||||    
T  30899626 gtacataaatcggatcctatcaaatcacccctaatttgtataatcacttaat 30899677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 12884286 - 12884178
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||| | |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  12884286 ttttctttctttagtacacgtttgagtttttttctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 12884187  T
Q  400 acttaatca 408  Q
    |||||||||    
T  12884186 acttaatca 12884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 14084849 - 14084742
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||| ||||| || ||| ||||||||||||||||||||| |||| |  |||||||| |||| |||| ||| ||||   ||  ||||||||||    
T  14084849 ttttctttcttcagtacaggtttgaattttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaaaatgtataatca 14084750  T
Q  401 cttaatca 408  Q
    ||||||||    
T  14084749 cttaatca 14084742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 407
Target Start/End: Original strand, 50552410 - 50552517
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttc-tagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| ||||||||||  |||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  50552410 ttttctttctttagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 50552509  T
Q  400 acttaatc 407  Q
    ||||||||    
T  50552510 acttaatc 50552517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 6150636 - 6150744
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    ||||||||||||| || |||| |||||||| ||||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||| |||||||    
T  6150636 ttttctttcttcgctatacgtttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttatataatc 6150735  T
Q  400 acttaatca 408  Q
    | |||||||    
T  6150736 atttaatca 6150744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 20905437 - 20905332
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttt--ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||||||||  |||||||| ||||||||  ||||||||||||||||| |||| |  |||||||| | || |||| |||||| |   ||||||||||||    
T  20905437 ttttctttctttagtacacgtttgagttttatttctagactctagttctcctttttgtacataaatctaatcctatcaaaccagccctaatttgtataat 20905338  T
Q  399 cactta 404  Q
    ||||||    
T  20905337 cactta 20905332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 406
Target Start/End: Complemental strand, 33124781 - 33124673
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttct-agactcta--gttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataa 397  Q
    |||||||||||  |||||||| |||||||||| | ||||||||  ||||| |||| || ||||||||  ||| |||| ||||||||   |||||||||||    
T  33124781 ttttctttctttagtacacgtttgagtttttttttagactctatagttctcctttttctacataaatcggatcctattaaaccacctctaatttgtataa 33124682  T
Q  398 tcacttaat 406  Q
    |||||||||    
T  33124681 tcacttaat 33124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 408
Target Start/End: Complemental strand, 30005103 - 30004948
Alignment:
Q  252 ttaagtataatacccacc-cccatttaaagaaaaat-tacatgttacttctttttctttcttcggtacacgtatgag---ttttttctagactctagttc 346  Q
    |||||| ||||||||||| |||||||||| |||||  ||  |||||  || |||||||| |||||||||||| ||||   |||||||||||||||| |||    
T  30005103 ttaagtctaatacccacctcccatttaaataaaaaaatatgtgttatatccttttcttttttcggtacacgtttgagtttttttttctagactctacttc 30005004  T
Q  347 tactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    | |||| |  ||||||||  ||| |||| ||||      |||||||||||||||||||||||    
T  30005003 tcctttttgtacataaatccgatcctatcaaac------caatttgtataatcacttaatca 30004948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 48722521 - 48722411
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt---ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataa 397  Q
    |||||||||||  |||||||| ||||||||||   |||||||||| ||||  ||| |  ||||||||  ||| |||| ||||||||   |||||||||||    
T  48722521 ttttctttctttagtacacgtttgagtttttttttctagactctatttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataa 48722422  T
Q  398 tcacttaatca 408  Q
    |||||||||||    
T  48722421 tcacttaatca 48722411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 51110250 - 51110142
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| ||||||| ||||| | |||| |  ||||||||  ||| |||| ||||||||   ||||| |||||||    
T  51110250 ttttctttctttagtacacgtttgagtttttttctagactatagttatcctttttgtacataaatcggatcctatcaaaccacccctaatttctataatc 51110151  T
Q  400 acttaatca 408  Q
    |||||||||    
T  51110150 acttaatca 51110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 406
Target Start/End: Complemental strand, 17487405 - 17487326
Alignment:
Q  327 ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaat 406  Q
    ||||||||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||| ||||||||||||||    
T  17487405 ttttttctagactctagttctcctttttttacataaatcggatcctatcaaaccacccctaatttatataatcacttaat 17487326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 18128111 - 18127978
Alignment:
Q  276 taaagaaaaattacatgttacttctttttctttcttcggtacacgtatgagtttttt--ctagactctagttctactttctcgacataaatttgatgcta 373  Q
    |||| ||||| || ||||||  || |||||||||||  |||||||| ||||||||||  ||||| ||||||||| |||| |  || |||||  ||| |||    
T  18128111 taaataaaaaatatatgttatatcattttctttctttagtacacgtttgagttttttttctagattctagttctccttt-tgtacgtaaatcggatccta 18128013  T
Q  374 taaaaccaccatcaatttgtataatcacttaatca 408  Q
    | ||||||||   ||||||||||||||||||||||    
T  18128012 tcaaaccacccataatttgtataatcacttaatca 18127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 3907377 - 3907494
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    ||||||||||||||||||| ||  |||||||| | |||||||| |||||| || || | |||| |  ||||||||  |||| ||| |||||| |  ||||    
T  3907377 atgttacttctttttctttttttagtacacgtttaagttttttttagactttattttttctttatgaacataaatacgatggtatcaaacca-ctccaat 3907475  T
Q  390 ttgtataatcacttaatca 408  Q
    ||||||||||| |||||||    
T  3907476 ttgtataatcatttaatca 3907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 379
Target Start/End: Original strand, 28189313 - 28189391
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaac 379  Q
    ||||||||||||  ||||||| |||||||||| |||||| ||||||| |||| |  |||||||| |||| |||| ||||    
T  28189313 ttttctttcttcaatacacgtttgagttttttttagactttagttctcctttttgtacataaatctgatcctatcaaac 28189391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 20470643 - 20470684
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactcta 342  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  20470643 ttttctttctttagtacacgtttgagttttttctagactcta 20470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 35874819 - 35874948
Alignment:
Q  281 aaaaattacatgttac-ttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaac 379  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  35874819 aaaaattacatgttacattttttttctttcttcagtacacgtatgagttttttctagactctagttctactttctggatataaatttgatgctatcaaac 35874918  T
Q  380 cac--catcaatttgtataatcacttaatc 407  Q
    |||   ||||||||||||||||||||||||    
T  35874919 cactatatcaatttgtataatcacttaatc 35874948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 408
Target Start/End: Complemental strand, 3628914 - 3628788
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    ||||||| |||||||||  |||||||| |||| |||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| |||||    
T  3628914 aaaaattgcatgttactcttttttctt-cttcagtacacgtatgagttttttctagactctagttctacattctggtcataaatttgatgctatcaaacc 3628816  T
Q  381 accatcaatttgtataatcacttaatca 408  Q
    ||||| ||||||||||||||| ||||||    
T  3628815 accattaatttgtataatcacataatca 3628788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 290 - 408
Target Start/End: Complemental strand, 32098337 - 32098219
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | |||| | ||||||||||||||||||| |||||||  | |||    
T  32098337 atgttacttctttttctttcttcagtacacgtttgagttttttctagactctagttatcctttttggacataaatttgatgctatcaaaccactcttaat 32098238  T
Q  390 ttgtataatcacttaatca 408  Q
    |||||| ||||||||||||    
T  32098237 ttgtatgatcacttaatca 32098219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 34524085 - 34523992
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||||| || ||| ||||||||| || | |||| ||||||||  |||||||||||||||||||||||    
T  34524085 tacacgtttgagttttttctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatca 34523992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 315 - 406
Target Start/End: Complemental strand, 39698072 - 39697981
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaat 406  Q
    ||||||| ||||||||||||||||| ||||||| || ||| | |||||||||| | |||| ||||||||| |||||||||| |||| |||||    
T  39698072 tacacgtttgagttttttctagactttagttctcctatcttggcataaatttggtactatcaaaccaccaccaatttgtatgatcatttaat 39697981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 402
Target Start/End: Original strand, 33452705 - 33452808
Alignment:
Q  297 ttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtata 396  Q
    |||||||||||||||||||||  || |||||||||||||||||||| |||| |||| | ||||||||| | ||| ||| ||||||||  |||||| ||||    
T  33452705 ttctttttctttcttcggtaccagtttgagttttttctagactctaattct-cttt-tggacataaatcttatggtatcaaaccacctccaatttatata 33452802  T
Q  397 atcact 402  Q
    ||||||    
T  33452803 atcact 33452808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 7858000 - 7858108
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||| ||||||||||||||||| |||| |  ||||||||  ||| |||| ||| ||||   |||||||||||||    
T  7858000 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgaacataaatcggatcctatcaaatcacccctaatttgtataatc 7858099  T
Q  400 acttaatca 408  Q
    |||||||||    
T  7858100 acttaatca 7858108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 18420758 - 18420650
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| | ||||||||||||| |||| |  ||||||||  ||| |||| |||||||  | |||||||||||||    
T  18420758 ttttctttctttagtacacgtttgagtttttttccagactctagttctcctttttgtacataaatcagatcctatcaaaccacacttaatttgtataatc 18420659  T
Q  400 acttaatca 408  Q
    |||||||||    
T  18420658 acttaatca 18420650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 408
Target Start/End: Complemental strand, 30915459 - 30915329
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgag---ttttttctagactctagttctactttctcgacataaatttgatgctataaa 377  Q
    ||||| || ||||||||| ||||||||||||||||| || | | ||   |||||| ||||||||| |||| |||||| |||||| || ||||||||  ||    
T  30915459 aaaaaatatatgttacttttttttctttcttcggtatacatttaagtttttttttttagactctaattctcctttctggacatagatctgatgctaccaa 30915360  T
Q  378 accaccatcaatttgtataatcacttaatca 408  Q
    ||| ||  |||| ||||||||||||||||||    
T  30915359 acctcctccaatatgtataatcacttaatca 30915329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 43968219 - 43968111
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||||| |||| |  ||||||||  ||| |||| |||||||    |||||||||||||    
T  43968219 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccactcctaatttgtataatc 43968120  T
Q  400 acttaatca 408  Q
    |||||||||    
T  43968119 acttaatca 43968111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 408
Target Start/End: Original strand, 13585171 - 13585322
Alignment:
Q  259 taatacccacccc-catttaaagaaaaattacatgttacttctttttctttcttcggtacacgtatgag-ttttttctagactctagttctactttctcg 356  Q
    ||||||||||||| |||||||  ||||| || ||||||  || |||||||||||  |||||||| |||| ||||||||||||||||||| |  ||| |      
T  13585171 taatacccaccccccatttaactaaaaaatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcttttttgt 13585270  T
Q  357 acataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||  ||| |||| ||||||||   |||||||||||||| |||||||    
T  13585271 acataaatcagatcctatcaaaccacccctaatttgtataatcaattaatca 13585322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 23567408 - 23567315
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||| |||||||||||| |||||||  | |||  |||||||| || | |||| ||||||||  |||||||||||||||||||||||    
T  23567408 tacacgtttgaggtttttctagactttagttctcttatctgaacataaatctgctactatcaaaccacccccaatttgtataatcacttaatca 23567315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 3445553 - 3445648
Alignment:
Q  259 taatacccacccccatttaaagaaaaattacat--gttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctacttt 352  Q
    ||||||||||||||| ||||| ||||| || ||  ||||  ||||||||||||||  |||||||| ||| |||||| |||||||||||||| ||||    
T  3445553 taatacccacccccacttaaataaaaaatatatatgttatatctttttctttctttagtacacgtttgaattttttttagactctagttctccttt 3445648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 408
Target Start/End: Complemental strand, 44665235 - 44665087
Alignment:
Q  259 taatacccacccc-catttaaagaaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttcta--gactctagttctactttctc 355  Q
    ||||||||||||| || ||||| ||||| || ||||||  ||||||||||||||    |||||| |||||||||| ||  |||||||||||| |||| |     
T  44665235 taatacccacccctcacttaaataaaaaatatatgttatatctttttctttctt----acacgtttgagttttttttatagactctagttctcctttttg 44665140  T
Q  356 gacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     ||||||||  ||| |||| ||||||||   ||||||||| ||||||||||||    
T  44665139 tacataaatcggatcctatcaaaccacctctaatttgtatcatcacttaatca 44665087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 41666097 - 41666040
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgag--ttttttctagactctagtt 345  Q
    |||||||||| | ||||||||||||||||||| ||||  |||||||||||||||||||    
T  41666097 atgttacttcatcttctttcttcggtacacgtttgagttttttttctagactctagtt 41666040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 42777668 - 42777766
Alignment:
Q  300 tttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    ||||| ||| |||| ||||||| ||| ||||||||||| |||| |||| ||||||  |||||||| ||||| ||| ||||||||  |||||||| ||||    
T  42777668 ttttttttttttcgatacacgtttgaattttttctagattctaattctcctttctatacataaatatgatgatatcaaaccacccccaatttgtgtaat 42777766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 12531489 - 12531582
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| ||||||| || ||   |||||||| |  | |||| |||| |||  |||||||||||||||||||||||    
T  12531489 tacacgtttgagttttttctagactttagttctcctatccgaacataaatcttgtactatcaaactacctccaatttgtataatcacttaatca 12531582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 408
Target Start/End: Original strand, 42076046 - 42076131
Alignment:
Q  324 gagttttttctagactctagttctactttctcgacataaatttgat-gctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||| ||| ||||||||| |||||||||||  ||||||||||  | ||||| |||| | |||||||||||||||| |||||||||    
T  42076046 gagttctttttagactctaattctactttctgaacataaatttttttgctatcaaactatcatcaatttgtataataacttaatca 42076131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 43926445 - 43926364
Alignment:
Q  327 ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||||||||||||||||||||| |  | ||||||  ||| |||| ||||||||   |||||||||||| |||||||||    
T  43926445 ttttttctagactctagttctactttttgtatataaatcggatcctatcaaaccacccataatttgtataattacttaatca 43926364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 3471545 - 3471623
Alignment:
Q  330 tttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||| |||||||||  ||| |  |||||||| |||| |||| ||||||||   ||||||||||||||||||||||    
T  3471545 tttctagaatctagttctcatttttgtacataaatgtgattctatcaaaccacccctaatttgtataatcacttaatca 3471623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 257 - 408
Target Start/End: Original strand, 46904603 - 46904765
Alignment:
Q  257 tataatacccacccccatttaaag--aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctac----- 349  Q
    ||||||||||||||||| |||||   |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||         
T  46904603 tataatacccacccccacttaaattaaaaaattacatgttacttttttttctt-cttcggtacatgtatgagttttttctagactctagttctactttct 46904701  T
Q  350 -----tttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
         ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  46904702 agacatttctggacatagatttgatgctatcaaaccaccatcaatttgtataatcacttaatca 46904765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 36538377 - 36538227
Alignment:
Q  257 tataatacccacccccatttaaagaaaaa--ttacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttct 354  Q
    |||||||||||||| || ||||| |||||  ||||||||||||| ||||||   ||||  ||||||||||||||||||||| ||||||||| |||||| |    
T  36538377 tataatacccaccctcacttaaataaaaaaattacatgttacttttttttc---cttcactacacgtatgagttttttctaaactctagttatactttat 36538281  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     |||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  36538280 ggacataaacttgatgctatcaaaccaccatcaatttgtataatcacttaatca 36538227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 281 - 408
Target Start/End: Original strand, 7766959 - 7767086
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagtttt--ttctagactctagttctactttctcgacataaatttgatgctataaaa 378  Q
    |||||||||||||||||| |||||||| |||  |||||||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||| |||    
T  7766959 aaaaattacatgttactt-tttttctt-ctttagtacacgtatgagttttttttctagactccagttctactttctggacataaatttgatgctatcaaa 7767056  T
Q  379 ccaccatcaatttgtataatcacttaatca 408  Q
    | ||||||||||||||||||||||||||||    
T  7767057 caaccatcaatttgtataatcacttaatca 7767086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 42009412 - 42009303
Alignment:
Q  299 ctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||| |||||||   ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  42009412 ctttttttttcttcatgacacgtatgagttttttttagactttagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataat 42009313  T
Q  399 cacttaatca 408  Q
    ||||||||||    
T  42009312 cacttaatca 42009303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 27303103 - 27303210
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||| ||||||| | ||||||||| ||||||||||||||||| ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||    
T  27303103 ttttttttcttcaggacacgtatgtgttttttctagactctacttctactttatggacataaatttgatgccatgaaaccaccatcaatttgtataatca 27303202  T
Q  401 cttaatca 408  Q
    ||||||||    
T  27303203 cttaatca 27303210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 281 - 408
Target Start/End: Complemental strand, 50677480 - 50677355
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    |||||||||||||||||| |||||||  |||||| |||| |||| |||||| ||||||| ||||| |||||||| |||| ||||||| || ||| |||||    
T  50677480 aaaaattacatgttacttttttttct--cttcgggacacatatgggtttttcctagactttagttatactttctggacaaaaatttgttgttatcaaacc 50677383  T
Q  381 accatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||||||||||||    
T  50677382 accatcaatttgtataatcacttaatca 50677355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 281 - 408
Target Start/End: Original strand, 51146836 - 51146960
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaac 379  Q
    ||||||||||||||| ||  ||||||| ||||| |||||||||||||||| ||||||| |||||||| ||||| | ||||||||||||||||||| ||||    
T  51146836 aaaaattacatgttattt--ttttctt-cttcgttacacgtatgagtttttttctagattctagttccactttttggacataaatttgatgctattaaac 51146932  T
Q  380 caccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||| || ||||||||||||    
T  51146933 caccatcaatttgaat-atcacttaatca 51146960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 408
Target Start/End: Original strand, 21596240 - 21596358
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    |||||| ||||||| |||| |||| ||||||| || ||||||||||||||||| |||| |||||| |||||||||  |||||||| |||||||   ||||    
T  21596240 atgttatttcttttacttttttcgttacacgtttgcgttttttctagactctaattctcctttctggacataaatcagatgctatcaaaccactcccaat 21596339  T
Q  390 ttgtataatcacttaatca 408  Q
    |||||||||||||||||||    
T  21596340 ttgtataatcacttaatca 21596358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 40152298 - 40152172
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    ||||| || ||||||||||||||| |||||||||||||||| |||||||||| ||||||||| |||| |||| | |||||| || ||||||||  ||| |    
T  40152298 aaaaaatatatgttacttctttttttttcttcggtacacgtttgagttttttttagactctaattcttctttttagacatagatctgatgctaccaaatc 40152199  T
Q  381 accatcaatttgtataatcacttaatc 407  Q
    | |  ||||||||||||||||||||||    
T  40152198 atccccaatttgtataatcacttaatc 40152172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 23164720 - 23164613
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||| ||| |||||||| ||||||||||||||||||||||||| |||| |  |||||||| |||| |||| ||||||||   ||||||||||||||    
T  23164720 ttttcttttttcagtacacgtttgagttttttctagactctagttctcctttttgtacataaatctgatcctatcaaaccacccctaatttgtataatca 23164621  T
Q  401 cttaatca 408  Q
    ||||||||    
T  23164620 cttaatca 23164613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 54430468 - 54430575
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||| |||||||||||| |||||||||||||| |||||||||| |||| |  |||||||| ||||| ||| ||||||||   ||||||||||||||    
T  54430468 ttttcttttttcggtacacgtttgagttttttctaggctctagttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatca 54430567  T
Q  401 cttaatca 408  Q
    ||||||||    
T  54430568 cttaatca 54430575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 21784919 - 21784825
Alignment:
Q  314 gtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||| ||||||||||||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  21784919 gtacacgtttgagttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatca 21784825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 406
Target Start/End: Complemental strand, 19966038 - 19965923
Alignment:
Q  293 ttacttctttttctttcttcggtacacgtatgagtt--ttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatt 390  Q
    |||||||||||||||| ||| ||| |||| ||||||  |||| || |||||| |||| |||| | ||||||||| ||||||||| |||||||   |||||    
T  19966038 ttacttctttttctttattccgtatacgtttgagttggttttttaaactctaattctcctttttggacataaatctgatgctatcaaaccactgccaatt 19965939  T
Q  391 tgtataatcacttaat 406  Q
    ||||||||||||||||    
T  19965938 tgtataatcacttaat 19965923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 46791846 - 46791738
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| ||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  46791846 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataatc 46791747  T
Q  400 acttaatca 408  Q
    |||||||||    
T  46791746 acttaatca 46791738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 18408107 - 18408214
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||  |||||||| ||||||||||||||||| |||||||  ||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||    
T  18408107 ttttctttctttagtacacgtttgagttttttctagactttagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataatca 18408206  T
Q  401 cttaatca 408  Q
    ||||||||    
T  18408207 cttaatca 18408214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 408
Target Start/End: Complemental strand, 41707207 - 41707096
Alignment:
Q  298 tctttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtata 396  Q
    ||||||||||||||  |||||||| |||||||||| ||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||| |||    
T  41707207 tctttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgcata 41707108  T
Q  397 atcacttaatca 408  Q
    ||||||||||||    
T  41707107 atcacttaatca 41707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 51939704 - 51939597
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||  || ||||| |||||||||||||||||||||||||  ||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||    
T  51939704 ttttctttctttagtccacgtttgagttttttctagactctagttctcttttttgtacataaatcagatcctatcaaaccacccctaatttgtataatca 51939605  T
Q  401 cttaatca 408  Q
    ||||||||    
T  51939604 cttaatca 51939597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 408
Target Start/End: Complemental strand, 1649978 - 1649872
Alignment:
Q  302 tttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcac 401  Q
    |||||||| ||||||||| | | |||||| |||| | |||||||||  ||||| ||||||||| || |||||| ||| ||||  ||||||||||||||||    
T  1649978 tttctttcatcggtacacatttaagttttgtctaaaatctagttctcttttctagacataaatctggtgctatcaaatcacccccaatttgtataatcac 1649879  T
Q  402 ttaatca 408  Q
    |||||||    
T  1649878 ttaatca 1649872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 403
Target Start/End: Complemental strand, 23067919 - 23067771
Alignment:
Q  259 taatacccacccccatttaaagaaaa-at-tacatgttacttctttttctttcttcggtacacgtatgagtttttt--ctagactctagttctactttct 354  Q
    ||||||||||||||||||||| |||| || || ||||||  || |||||||||||  |||||||| ||||||||||  ||||||| ||||||| |||| |    
T  23067919 taatacccacccccatttaaataaaatatatatatgttatatcattttctttctttagtacacgtttgagttttttttctagactttagttctccttttt 23067820  T
Q  355 cgacataaatttgatgctataaaaccaccatcaatttgtataatcactt 403  Q
      ||||||||  ||| |||| ||||||||   |||||||||||||||||    
T  23067819 gtacataaatcggatcctatcaaaccacccctaatttgtataatcactt 23067771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 408
Target Start/End: Complemental strand, 28132936 - 28132776
Alignment:
Q  252 ttaagtataatacccaccccc-atttaaagaaaaattacat--gttacttctttttctttcttcggtacacgtatgag-ttttttctagactctagttct 347  Q
    |||| |||||||||||||||| ||||||  ||||| || ||  ||||  || |||||||||||  |||||| | |||| |||||||||||||||||||||    
T  28132936 ttaaatataatacccaccccccatttaactaaaaaatatatatgttatatcattttctttctttagtacacatttgagattttttctagactctagttct 28132837  T
Q  348 actttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
     |||| |  ||||||||  ||| |||| ||| |||| | ||||||||||||||||||||||    
T  28132836 cctttttgtacataaatcagatcctatcaaatcacccttaatttgtataatcacttaatca 28132776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 48627163 - 48627070
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||||||| |||||||  | ||| ||||||||| |||| |||| | ||||||  |||||||||||||||||| ||||    
T  48627163 tacacgtttgagttttttctagactttagttctcatatctggacataaatctgatactatcagaccaccgccaatttgtataatcacttgatca 48627070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 8364087 - 8364195
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||| ||||||||||| ||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  8364087 ttttctttctttagtacacgtttgagtttttttctagactcttgttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 8364186  T
Q  400 acttaatca 408  Q
    |||||||||    
T  8364187 acttaatca 8364195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 29387903 - 29387795
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttct-agactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| | ||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  29387903 ttttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 29387804  T
Q  400 acttaatca 408  Q
    |||||||||    
T  29387803 acttaatca 29387795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 408
Target Start/End: Original strand, 24252531 - 24252643
Alignment:
Q  298 tctttttctttcttcggtacacgtatgagtttttt---ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgta 394  Q
    ||||||||||||||  |||||||| ||||||||||   ||||||||||||||| |||| |  |||||| |  ||| |||| |||||||| | ||||||||    
T  24252531 tctttttctttctttagtacacgtttgagtttttttttctagactctagttcttctttttgtacataa-tcagatcctatcaaaccacccttaatttgta 24252629  T
Q  395 taatcacttaatca 408  Q
    ||||||||||||||    
T  24252630 taatcacttaatca 24252643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 25599236 - 25599127
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttct--agactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataat 398  Q
    |||||||||||| ||||| || |||||||||| |  ||||||||||||| |||| |  |||||||| |||| |||| ||||||||   ||||| ||||||    
T  25599236 ttttctttcttcagtacaggtttgagttttttttttagactctagttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataat 25599137  T
Q  399 cacttaatca 408  Q
    ||||||||||    
T  25599136 cacttaatca 25599127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 43905977 - 43905884
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||| ||||| |||||| ||||||| || ||| ||||||||| || | |||| |||| ||| |||||||||||||||||| |||||    
T  43905977 tacacgtttgaggtttttttagactttagttctcctatctggacataaatctggtactatcaaactaccctcaatttgtataatcactcaatca 43905884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 408
Target Start/End: Complemental strand, 52655257 - 52655164
Alignment:
Q  316 acacgtatgagttttt-tctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||| ||||||||| |||||||||||||||| |||| |  | ||||||  ||| |||| |||||||||  ||||||||||||||||||||||    
T  52655257 acacgtttgagtttttctctagactctagttctcctttttgtatataaatcggatcctatcaaaccaccactaatttgtataatcacttaatca 52655164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 13401375 - 13401482
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||| |||||| ||||| |||||||||| ||| ||||||||||| |||| |  ||||| ||| ||| |||| |||||||  | |||||||||||||    
T  13401375 ttttcttttttcggtccacgt-tgagtttttttctaaactctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatc 13401473  T
Q  400 acttaatca 408  Q
    |||||||||    
T  13401474 acttaatca 13401482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 1255158 - 1255092
Alignment:
Q  341 tagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatc 407  Q
    ||||||| |||| | ||||||||| ||||||||| |||| ||| | |||||||||||| ||||||||    
T  1255158 tagttcttctttttggacataaatctgatgctatcaaacgacctttaatttgtataatgacttaatc 1255092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 1255218 - 1255176
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagtttttt 332  Q
    |||||||||||| |||||||||||||||| || ||||||||||    
T  1255218 atgttacttcttcttctttcttcggtacatgtttgagtttttt 1255176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 27110959 - 27110909
Alignment:
Q  298 tctttttctttcttcggtacacgtatgag-ttttttctagactctagttct 347  Q
    ||||||||||||||  |||||||| |||| |||||||||||||||||||||    
T  27110959 tctttttctttctttagtacacgtttgagtttttttctagactctagttct 27110909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 27729918 - 27729810
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttc-tagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    ||||||||| |  |||||||| ||||||||||  |||||||||||||| |||| |  ||||||||  |||  ||| ||||||||   |||||||||||||    
T  27729918 ttttctttcattagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcttatcaaaccacccctaatttgtataatc 27729819  T
Q  400 acttaatca 408  Q
    || ||||||    
T  27729818 acataatca 27729810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 408
Target Start/End: Complemental strand, 30915537 - 30915407
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagtttttt---ctagactctagttctactttctcgacataaatttgatgctataaa 377  Q
    ||||| |||||||||| | |||||||||||| ||||| ||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||| ||    
T  30915537 aaaaaatacatgttacatatttttctttctttggtactcgtatgagtttttttttctagactctagttctactttctggacataaatttgatgctatcaa 30915438  T
Q  378 accaccatcaatttgtataatcacttaatca 408  Q
    ||| ||||||||||||||||| |||||||||    
T  30915437 acccccatcaatttgtataattacttaatca 30915407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 6294176 - 6294286
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    |||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||| | | ||||||||||||||||| |||||    
T  6294176 aaaaattaaatgttacttcttttactttctt-ggtacatgtatgagttttttctagactctagttctactttttgggcataaatttgatgctatcaaacc 6294274  T
Q  381 accatcaatttg 392  Q
    | ||||||||||    
T  6294275 atcatcaatttg 6294286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 404
Target Start/End: Original strand, 7341130 - 7341228
Alignment:
Q  306 tttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcactta 404  Q
    ||||||| |||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  7341130 tttcttcagtacacatatgagttttttctagactctagttccactttctggacataaatttgatgttattaaaccaccgtcaatttgaataatcactta 7341228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 3748760 - 3748609
Alignment:
Q  257 tataatacccacccccatttaaag-aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttct--agactctagttctactttc 353  Q
    ||||||| ||||||||| |||||  ||||||||||||||||||  ||||   |||||  ||||  |||||||||||| |  ||| ||||||||||||||     
T  3748760 tataatatccacccccacttaaattaaaaattacatgttactttctttt---tcttcaatacaaatatgagttttttttttagattctagttctactttt 3748664  T
Q  354 tcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    | ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  3748663 tggacataaatttgatgctatcaaaccgccatcaatttgtataatcacttaatca 3748609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 400
Target Start/End: Original strand, 11088461 - 11088569
Alignment:
Q  290 atgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaat 389  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| |||  | ||||||||| ||||||||  ||||||||  ||||    
T  11088461 atgttacttctttttcttttttcggtacacgtttgagttttttctagactctaattctcctt--tggacataaatctgatgctaccaaaccacccccaat 11088558  T
Q  390 ttgtataatca 400  Q
    || ||||||||    
T  11088559 ttatataatca 11088569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 408
Target Start/End: Original strand, 350312 - 350437
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    ||||| || ||||||||||||||||||| | ||||||| || ||| ||||||| |||| ||| |||| ||||   ||||||||| ||||||||| |||||    
T  350312 aaaaaatatatgttacttctttttctttttccggtacatgtttgaattttttccagacactaattctcctttg--gacataaatatgatgctatcaaacc 350409  T
Q  381 accatcaatttgtataatcacttaatca 408  Q
    ||||||||||| |||||||||| |||||    
T  350410 accatcaatttatataatcactcaatca 350437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 408
Target Start/End: Original strand, 19231528 - 19231635
Alignment:
Q  300 tttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    ||||| ||||||| | |||||| ||||||||||||||| | |||||||||||||| ||||||||| || |||||| |||| ||| ||||||||||| |||    
T  19231528 tttttttttcttcaggacacgtttgagttttttctagagtttagttctactttctggacataaatctggtgctatcaaactaccttcaatttgtat-atc 19231626  T
Q  400 acttaatca 408  Q
    |||||||||    
T  19231627 acttaatca 19231635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 6360676 - 6360783
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||  ||| |  ||||||||  ||| |||| |||||||| | ||||||||||||||    
T  6360676 ttttctttctttagtacacgtttgagttttttctagactctagttctcttttttgcacataaatcggatcctatcaaaccacccttaatttgtataatca 6360775  T
Q  401 cttaatca 408  Q
    ||||||||    
T  6360776 cttaatca 6360783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 57603 - 57711
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttct-agactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    ||||||||||||||||||||| |||||||||| | | ||||||||||| |||| |  |||||||| |||| |||| ||||||||   |||||||||||||    
T  57603 ttttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgtataatc 57702  T
Q  400 acttaatca 408  Q
    |||||||||    
T  57703 acttaatca 57711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 2618271 - 2618378
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||  |||||||| ||||||||||||||||| |||||||  ||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||    
T  2618271 ttttctttctttagtacacgtttgagttttttctagactttagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtataatca 2618370  T
Q  401 cttaatca 408  Q
    ||||||||    
T  2618371 cttaatca 2618378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 12614851 - 12614757
Alignment:
Q  314 gtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||| |||||||||| |||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  12614851 gtacacgtttgagttttttttagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatca 12614757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 7525317 - 7525207
Alignment:
Q  299 ctttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataa 397  Q
    |||||| ||||||  |||||||| |||||||||| ||||||||||||||| | || |  ||||||||  ||| |||| ||||||||   |||||||||||    
T  7525317 ctttttttttctttagtacacgtttgagtttttttctagactctagttctccattttgtacataaatcggatcctatcaaaccacccataatttgtataa 7525218  T
Q  398 tcacttaatca 408  Q
    |||||||||||    
T  7525217 tcacttaatca 7525207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 1093166 - 1093081
Alignment:
Q  323 tgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||| | |||| ||||||| | ||||| ||||||| ||| |||||    
T  1093166 tgagttttttctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgactaaatca 1093081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 1690767 - 1690674
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||| | | ||||||| || | | ||||||||| || | |||| ||||||||| |||||||||||||||||| ||||    
T  1690767 tacacgtttgagttttttctaaattttagttctcctatttggacataaatctggtactatcaaaccaccaccaatttgtataatcacttgatca 1690674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 29308601 - 29308508
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| ||||||||||||| ||| ||||| | || ||| |||||||||||| | |||| ||||||| | ||||| ||||||| |||||||||    
T  29308601 tacacgtttgagttttttctaaactttagtttttctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatca 29308508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 3514999 - 3514891
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||||||||||  |||||||| |||||||||| ||| ||||||||||| |||| |  ||||||||  ||| |||| ||||||||   |||||||||||||    
T  3514999 ttttctttctttagtacacgtttgagtttttttctaaactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtataatc 3514900  T
Q  400 acttaatca 408  Q
    || ||||||    
T  3514899 acgtaatca 3514891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 408
Target Start/End: Complemental strand, 14893584 - 14893458
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaacc 380  Q
    |||||||| ||||||||   |||||||||||| ||||| || |||||||||| ||   |||| |||| |||||| || |||||| ||||||||| ||||     
T  14893584 aaaaattatatgttactaagttttctttcttcagtacatgtttgagttttttgtact-tctaattctcctttctagatataaatctgatgctatcaaaca 14893486  T
Q  381 accatcaatttgtataatcacttaatca 408  Q
    ||  | |||||||||||| |||||||||    
T  14893485 actctgaatttgtataattacttaatca 14893458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 29149345 - 29149426
Alignment:
Q  327 ttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||||| |||| |  ||||||||  ||| |||| |||||||    ||||||||||||||||||||||    
T  29149345 ttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataatcacttaatca 29149426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 6754122 - 6754229
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatca 400  Q
    |||||||||||  |||| ||| ||||||||||||||| |||||||||  ||| |  ||||||||  ||| |||| |||||| |   |||||||||| |||    
T  6754122 ttttctttctttagtacgcgtttgagttttttctagattctagttctcttttttgtacataaatcggatcctatcaaaccatccctaatttgtatagtca 6754221  T
Q  401 cttaatca 408  Q
    ||||||||    
T  6754222 cttaatca 6754229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 370
Target Start/End: Original strand, 21945948 - 21946034
Alignment:
Q  281 aaaaattacatgttacttctttttctttcttcggtacacgtatgagttttttctagactctagttctactttctcgacataaatttgatg 370  Q
    |||||||||||||||||| | |||   ||||| | ||||||||| |||||| ||| ||||||||||||  || | |||||||||||||||    
T  21945948 aaaaattacatgttacttttgttt---tcttcaggacacgtatgtgtttttcctaaactctagttctatatttttgacataaatttgatg 21946034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 31234862 - 31234934
Alignment:
Q  334 tagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||| | ||||  ||||  ||||||| |||||| |  |||||||||||||||||||||||    
T  31234862 tagactctagttctactttttagacaagaattcaatgctatcaaaccatc--caatttgtataatcacttaatca 31234934  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 408
Target Start/End: Original strand, 31243999 - 31244071
Alignment:
Q  334 tagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||||||||||||||| | ||||  ||||  ||||||| |||||| |  |||||||||||||||||||||||    
T  31243999 tagactctagttctactttttagacaagaattcaatgctatcaaaccatc--caatttgtataatcacttaatca 31244071  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 31258606 - 31258565
Alignment:
Q  301 ttttctttcttcggtacacgtatgagttttttctagactcta 342  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  31258606 ttttctttctttagtacacgtttgagttttttctagactcta 31258565  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 31860933 - 31861024
Alignment:
Q  315 tacacgtatgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| |||| |||||||||||| ||||||| || ||| ||||||||| || |  ||| ||||||||  ||||||||||||| |||||||||    
T  31860933 tacacgtttgaggtttttctagactttagttcttctatctggacataaatctggt-atatcaaaccacc-ccaatttgtataattacttaatca 31861024  T

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Target: scaffold0126 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 16638 - 16733
Alignment:
Q  314 gtacacgtatgagtttt-ttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    |||||||| |||||||| ||||||||||||||||| |||| |  ||||||||  ||| |||| ||||||||   ||||||||||||||||||||||    
T  16638 gtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatca 16733  T

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Target: scaffold0100 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 46322 - 46214
Alignment:
Q  301 ttttctttcttcggtacacgtatgagtttttt-ctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatc 399  Q
    |||| |||||||||||||| | ||| |||||| |||||||||||||||  ||| |  ||||| || |||| |||| ||||||||   |||||| ||||||    
T  46322 ttttatttcttcggtacacatttgaatttttttctagactctagttctcatttttatacatatatctgatcctatcaaaccacccataatttggataatc 46223  T
Q  400 acttaatca 408  Q
    |||||||||    
T  46222 acttaatca 46214  T

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Target: scaffold0606 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 8521 - 8436
Alignment:
Q  323 tgagttttttctagactctagttctactttctcgacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatca 408  Q
    ||||||| | ||||||||||| | | |||||| ||||||||  | ||||||| ||||||||   |||||||||||||| |||||||    
T  8521 tgagtttctactagactctagatttcctttctggacataaaccttatgctatcaaaccacccataatttgtataatcaattaatca 8436  T

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