View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9837_low_8 (Length: 404)

Name: NF9837_low_8
Description: NF9837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9837_low_8
NF9837_low_8
[»] chr3 (22 HSPs)
chr3 (16-392)||(12033375-12033750)
chr3 (32-392)||(14865611-14865971)
chr3 (31-392)||(17131496-17131857)
chr3 (39-391)||(19235002-19235351)
chr3 (267-392)||(23370435-23370560)
chr3 (39-379)||(13302185-13302521)
chr3 (39-379)||(13312841-13313177)
chr3 (39-379)||(13323732-13324069)
chr3 (250-392)||(51301572-51301715)
chr3 (263-336)||(10389429-10389502)
chr3 (263-336)||(10414518-10414591)
chr3 (263-336)||(10421188-10421261)
chr3 (270-363)||(24933787-24933880)
chr3 (183-321)||(17240513-17240652)
chr3 (267-321)||(9534328-9534382)
chr3 (267-321)||(18929246-18929300)
chr3 (267-319)||(20247791-20247843)
chr3 (267-319)||(24192957-24193009)
chr3 (270-322)||(41455097-41455149)
chr3 (309-392)||(10555353-10555434)
chr3 (267-322)||(16801467-16801521)
chr3 (267-321)||(14762758-14762812)
[»] scaffold0053 (1 HSPs)
scaffold0053 (23-392)||(79419-79789)
[»] chr1 (10 HSPs)
chr1 (15-392)||(21710566-21710943)
chr1 (31-392)||(20851062-20851423)
chr1 (31-392)||(20857689-20858050)
chr1 (31-392)||(21706040-21706401)
chr1 (269-363)||(20044910-20045004)
chr1 (45-321)||(19663517-19663794)
chr1 (39-321)||(32651345-32651627)
chr1 (248-321)||(18712780-18712854)
chr1 (267-321)||(20437024-20437078)
chr1 (270-322)||(41112038-41112090)
[»] chr7 (26 HSPs)
chr7 (23-392)||(16090831-16091201)
chr7 (23-392)||(29181038-29181408)
chr7 (15-392)||(20906391-20906767)
chr7 (15-228)||(2966713-2966926)
chr7 (222-392)||(2971209-2971379)
chr7 (37-382)||(2465134-2465474)
chr7 (263-392)||(14319559-14319688)
chr7 (39-382)||(3857308-3857647)
chr7 (43-392)||(14230558-14230906)
chr7 (267-392)||(14567204-14567329)
chr7 (39-329)||(21230952-21231242)
chr7 (269-336)||(31155396-31155463)
chr7 (267-321)||(11382871-11382925)
chr7 (267-321)||(11389348-11389402)
chr7 (267-322)||(14422985-14423040)
chr7 (267-321)||(16009577-16009631)
chr7 (270-322)||(12590643-12590695)
chr7 (270-322)||(13007435-13007487)
chr7 (267-323)||(20311050-20311106)
chr7 (267-321)||(13679494-13679548)
chr7 (267-321)||(15168176-15168230)
chr7 (270-322)||(12709843-12709895)
chr7 (270-322)||(13122914-13122966)
chr7 (270-322)||(13743712-13743764)
chr7 (267-319)||(16677296-16677348)
chr7 (267-319)||(17651532-17651584)
[»] chr8 (8 HSPs)
chr8 (31-392)||(24320600-24320961)
chr8 (39-321)||(29643386-29643668)
chr8 (267-392)||(44477623-44477749)
chr8 (267-392)||(44492781-44492907)
chr8 (236-321)||(18614240-18614327)
chr8 (183-321)||(23482053-23482192)
chr8 (267-319)||(8727735-8727787)
chr8 (270-322)||(23866618-23866670)
[»] chr4 (7 HSPs)
chr4 (23-360)||(16146791-16147129)
chr4 (144-329)||(27906142-27906328)
chr4 (208-319)||(14486601-14486713)
chr4 (39-323)||(15407911-15408196)
chr4 (270-392)||(53483708-53483831)
chr4 (267-322)||(11848114-11848169)
chr4 (270-322)||(8045832-8045884)
[»] scaffold0072 (1 HSPs)
scaffold0072 (39-392)||(49899-50254)
[»] chr5 (23 HSPs)
chr5 (31-392)||(19236665-19237025)
chr5 (31-392)||(22460920-22461281)
chr5 (31-392)||(22467544-22467905)
chr5 (37-391)||(20772741-20773090)
chr5 (37-391)||(20781516-20781865)
chr5 (39-391)||(24929862-24930211)
chr5 (32-392)||(28909220-28909577)
chr5 (32-392)||(28945615-28945972)
chr5 (21-392)||(28895972-28896340)
chr5 (21-392)||(28924798-28925166)
chr5 (21-392)||(28889268-28889636)
chr5 (21-330)||(20819975-20820279)
chr5 (21-330)||(20827075-20827379)
chr5 (21-242)||(28931061-28931280)
chr5 (144-329)||(34829962-34830146)
chr5 (267-387)||(38144472-38144591)
chr5 (183-321)||(18407944-18408083)
chr5 (183-321)||(23111200-23111339)
chr5 (267-323)||(22438746-22438802)
chr5 (267-321)||(19512387-19512441)
chr5 (39-85)||(23111436-23111482)
chr5 (267-321)||(28370055-28370109)
chr5 (270-322)||(23528634-23528686)
[»] scaffold0023 (1 HSPs)
scaffold0023 (15-392)||(135187-135563)
[»] chr2 (14 HSPs)
chr2 (31-369)||(10341-10679)
chr2 (31-371)||(25180880-25181212)
chr2 (263-392)||(27207649-27207778)
chr2 (263-392)||(26885179-26885307)
chr2 (144-392)||(23168229-23168480)
chr2 (144-392)||(23579486-23579737)
chr2 (183-321)||(23265058-23265197)
chr2 (183-321)||(23280126-23280265)
chr2 (304-392)||(27366477-27366566)
chr2 (270-392)||(5705952-5706075)
chr2 (267-321)||(6483718-6483772)
chr2 (267-321)||(6487185-6487239)
chr2 (267-321)||(21908360-21908414)
chr2 (270-322)||(26583830-26583882)
[»] chr6 (29 HSPs)
chr6 (31-392)||(20007877-20008238)
chr6 (39-391)||(9099005-9099354)
chr6 (37-382)||(21364423-21364763)
chr6 (37-382)||(23968405-23968745)
chr6 (144-392)||(31252300-31252549)
chr6 (269-392)||(11288601-11288721)
chr6 (39-190)||(29097637-29097789)
chr6 (269-336)||(15458492-15458559)
chr6 (269-336)||(15465087-15465154)
chr6 (267-392)||(34639915-34640041)
chr6 (267-392)||(34646589-34646715)
chr6 (39-321)||(9187268-9187550)
chr6 (294-392)||(28288442-28288537)
chr6 (267-329)||(10986173-10986235)
chr6 (304-392)||(24563475-24563564)
chr6 (267-322)||(29614146-29614201)
chr6 (267-321)||(4477858-4477912)
chr6 (267-321)||(23839199-23839253)
chr6 (267-329)||(24512836-24512898)
chr6 (39-117)||(24513048-24513126)
chr6 (270-322)||(12168366-12168418)
chr6 (270-322)||(19287275-19287327)
chr6 (270-322)||(19785869-19785921)
chr6 (270-322)||(19878459-19878511)
chr6 (360-392)||(24641612-24641644)
chr6 (267-322)||(930095-930150)
chr6 (267-322)||(18800438-18800493)
chr6 (39-85)||(25598415-25598461)
chr6 (270-322)||(19884235-19884287)
[»] scaffold0348 (1 HSPs)
scaffold0348 (38-327)||(9108-9396)
[»] scaffold1318 (1 HSPs)
scaffold1318 (183-392)||(1842-2051)
[»] scaffold0131 (1 HSPs)
scaffold0131 (21-392)||(754-1121)
[»] scaffold1469 (1 HSPs)
scaffold1469 (38-336)||(1129-1424)
[»] scaffold0384 (1 HSPs)
scaffold0384 (37-363)||(16023-16347)
[»] scaffold0029 (3 HSPs)
scaffold0029 (37-382)||(91144-91487)
scaffold0029 (37-382)||(96870-97213)
scaffold0029 (269-322)||(111885-111938)
[»] scaffold0127 (1 HSPs)
scaffold0127 (41-392)||(10016-10364)
[»] scaffold0001 (1 HSPs)
scaffold0001 (188-392)||(492958-493162)
[»] scaffold0553 (2 HSPs)
scaffold0553 (267-392)||(10125-10250)
scaffold0553 (294-363)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (267-392)||(1455-1580)
[»] scaffold0609 (1 HSPs)
scaffold0609 (144-392)||(5786-6035)
[»] scaffold0720 (1 HSPs)
scaffold0720 (263-392)||(3332-3461)
[»] scaffold0183 (1 HSPs)
scaffold0183 (269-391)||(6-125)
[»] scaffold0019 (1 HSPs)
scaffold0019 (39-323)||(135245-135530)
[»] scaffold0261 (1 HSPs)
scaffold0261 (144-329)||(23562-23748)
[»] scaffold0249 (1 HSPs)
scaffold0249 (269-336)||(13880-13947)
[»] scaffold0107 (1 HSPs)
scaffold0107 (61-329)||(40524-40793)
[»] scaffold0026 (2 HSPs)
scaffold0026 (267-392)||(111686-111812)
scaffold0026 (267-322)||(11850-11905)
[»] scaffold0099 (1 HSPs)
scaffold0099 (90-320)||(12776-13019)
[»] scaffold0034 (1 HSPs)
scaffold0034 (144-329)||(73161-73347)
[»] scaffold0453 (1 HSPs)
scaffold0453 (263-326)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (183-321)||(16736-16875)
[»] scaffold0085 (1 HSPs)
scaffold0085 (15-73)||(3921-3980)
[»] scaffold2054 (1 HSPs)
scaffold2054 (269-322)||(717-770)
[»] scaffold0124 (1 HSPs)
scaffold0124 (43-321)||(34276-34555)
[»] scaffold0146 (1 HSPs)
scaffold0146 (183-321)||(13548-13687)
[»] scaffold0004 (1 HSPs)
scaffold0004 (248-321)||(116877-116951)
[»] scaffold0235 (2 HSPs)
scaffold0235 (268-379)||(22536-22646)
scaffold0235 (39-122)||(22792-22875)
[»] scaffold0129 (1 HSPs)
scaffold0129 (270-392)||(45203-45326)
[»] scaffold0924 (1 HSPs)
scaffold0924 (267-322)||(750-805)
[»] scaffold0461 (1 HSPs)
scaffold0461 (183-321)||(8-147)
[»] scaffold0247 (1 HSPs)
scaffold0247 (267-322)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (267-322)||(30858-30913)
[»] scaffold0020 (1 HSPs)
scaffold0020 (248-321)||(101928-102002)
[»] scaffold0796 (2 HSPs)
scaffold0796 (270-363)||(1691-1784)
scaffold0796 (270-363)||(5714-5807)
[»] scaffold0310 (1 HSPs)
scaffold0310 (267-323)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (267-319)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (267-322)||(932-987)
scaffold0456 (267-322)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (267-322)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (263-321)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (267-321)||(1387-1441)
[»] scaffold1773 (1 HSPs)
scaffold1773 (270-331)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (269-322)||(1897-1950)
scaffold0117 (269-322)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (270-322)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (270-322)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 325; Significance: 0; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 16 - 392
Target Start/End: Complemental strand, 12033750 - 12033375
Alignment:
Q  16 acatcacaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcat 115  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12033750 acatcaaaggaacagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcaa 12033651  T
Q  116 tccaattacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatc 215  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12033650 ttcaattacgatcaacatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatc 12033551  T
Q  216 atcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccctt 315  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033550 atcattaacccttaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccctt 12033451  T
Q  316 accttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12033450 accttagaattgcaaagacaa-aagcacatcaaatcagttcctaagttcttctctcttggtcttctctccttacctt 12033375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 32 - 392
Target Start/End: Original strand, 14865611 - 14865971
Alignment:
Q  32 aactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaac 131  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  14865611 aactaaacatcaacaacaacaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaat 14865710  T
Q  132 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  14865711 atcaacaacatggattaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattatt 14865810  T
Q  232 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865811 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 14865910  T
Q  332 gacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865911 gacaaatagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 14865971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 31 - 392
Target Start/End: Original strand, 17131496 - 17131857
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17131496 aaactaaacatcaacaacaacaattcagctcatttaagcattcatgcaaagcttccaaaattcatccatcatattctattttcattccaattacaatcaa 17131595  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  17131596 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 17131695  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131696 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 17131795  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131796 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 17131857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 39 - 391
Target Start/End: Complemental strand, 19235351 - 19235002
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaa-ttacgatcaacatcaac 137  Q
    ||||||||||||||||| |  ||| |||| ||||||| || ||||||||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||    
T  19235351 catcaacaacaacaattaactccaatcaaacattcattcagaacttccaaaattcatctatcatattctattttcactccaaattatgatcaatatcaac 19235252  T
Q  138 aacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccca 237  Q
    || || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |||||||    
T  19235251 aatatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttccca 19235154  T
Q  238 attttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  19235153 attttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa 19235054  T
Q  337 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 391  Q
      ||  |||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  19235053 --agtgcagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 19235002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 23370560 - 23370435
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 366  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  367 ctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||    
T  23370460 ctctcttggtcttctctccttgcctt 23370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 39 - 379
Target Start/End: Complemental strand, 13302521 - 13302185
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||| || |||||||| ||||||||| |||||||||||||  ||||| || |||||    
T  13302521 catcaacaacaacaattcagagcattctagcaatcatacaaaacttcccaa-ttcatccaacatattctaatttcattccaattctgatca-caacaaca 13302424  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
      ||   ||||||||  ||||| | || |||  |||||||    ||||   ||||||| ||| || ||||| || ||||||| |||||| | || ||||     
T  13302423 ttataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaattcccca- 13302325  T
Q  239 ttttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 337  Q
    ||||| ||| ||||||| | || ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||| ||     
T  13302324 ttttatcttcaagaacaatgcatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattg--tagaaaaa 13302227  T
Q  338 tagcacagcaaatcagttcctaagttcttctctcttggtctt 379  Q
     | ||||||||||||||||||| |||| |||| |||| ||||    
T  13302226 aaacacagcaaatcagttcctaggttcatctcccttgttctt 13302185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 39 - 379
Target Start/End: Complemental strand, 13313177 - 13312841
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||| || |||||||| ||||||||| |||||||||||||  ||||| || |||||    
T  13313177 catcaacaacaacaattcagagcattctagcaatcatacaaaacttcccaa-ttcatccaacatattctaatttcattccaattctgatca-caacaaca 13313080  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
      ||   ||||||||  ||||| | || |||  |||||||    ||||   ||||||| ||| || ||||| || ||||||| |||||| | || ||| |    
T  13313079 ttataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaatt-cccta 13312981  T
Q  239 ttttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 337  Q
    ||||| ||| ||||||| | || |||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||| ||     
T  13312980 ttttatcttcaagaacaatccatttgattaattttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattg--tagaaaaa 13312883  T
Q  338 tagcacagcaaatcagttcctaagttcttctctcttggtctt 379  Q
     | ||||||||||||||||||| |||| |||| |||| ||||    
T  13312882 aaacacagcaaatcagttcctaggttcatctcccttgttctt 13312841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 39 - 379
Target Start/End: Complemental strand, 13324069 - 13323732
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||| || |||||||| ||||||||| |||||||||||||  ||||| || |||||    
T  13324069 catcaacaacaacaattcagagcattctagcaatcatacaaaacttcccaa-ttcatccaacatattctaatttcattccaattctgatca-caacaaca 13323972  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
      ||   ||||||||  ||||| | || |||  |||||||    ||||   ||||||| ||| || ||||| || ||||||| |||||| | || |||||    
T  13323971 ttataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaatt-cccaa 13323873  T
Q  239 ttttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||| ||| ||||||| |  |||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||| ||    
T  13323872 ttttatcttcaagaacaatctaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattg--tagaaaa 13323775  T
Q  337 ttagcacagcaaatcagttcctaagttcttctctcttggtctt 379  Q
      |   ||||||||||||||||| ||||||||| |||| ||||    
T  13323774 aaaaatcagcaaatcagttcctaggttcttctcccttgttctt 13323732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 250 - 392
Target Start/End: Original strand, 51301572 - 51301715
Alignment:
Q  250 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagca 347  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||| |||||||    | ||||||     
T  51301572 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgcgaagacaaagaaaacacagc- 51301670  T
Q  348 aatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||  |||   |||||||||||||||||||||||||||||||||    
T  51301671 aatcgattctctagttcttctctcttggtcttctctccttgcctt 51301715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 10389502 - 10389429
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10389429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 10414591 - 10414518
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10414518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 10421261 - 10421188
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10421188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 363
Target Start/End: Complemental strand, 24933880 - 24933787
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 363  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| |   | ||||| ||| ||||||||| |||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaggaagaattaacaccgcaaatcagctcctaagtt 24933787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 17240652 - 17240513
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 279  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  17240652 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 17240555  T
Q  280 tatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  17240554 tatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 18929246 - 18929300
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18929246 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 392
Target Start/End: Original strand, 10555353 - 10555434
Alignment:
Q  309 cacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||| ||| ||||  || ||  ||||||| | |||||| |||||||||||||||||||| |||||||||    
T  10555353 cacccttaccttagaattgtaaacacaaa-agtacgacaaatcaatccctaagctcttctctcttggtcttctc-ccttgcctt 10555434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 16801521 - 16801467
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||||||||| |||| |||||| ||||| || ||||||||||||||    
T  16801521 aattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 14762812 - 14762758
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 23 - 392
Target Start/End: Complemental strand, 79789 - 79419
Alignment:
Q  23 aggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaatt 122  Q
    ||||| || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  79789 aggaacagcaactaaacatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaatt 79690  T
Q  123 acgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta 222  Q
    |||||||| |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  79689 acgatcaatatcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcatta 79590  T
Q  223 acccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  79589 acccttattttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T
Q  323 aattgcaaagacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  79489 aattgcaaagacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 79419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 295; Significance: 1e-165; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 15 - 392
Target Start/End: Original strand, 21710566 - 21710943
Alignment:
Q  15 gacatcacaggaatagaaa-ctaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttc 113  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21710566 gacatcaaaggaacagaaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaagcttccaaaattcatccatcatattctattttc 21710665  T
Q  114 attccaattacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaa 213  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||    
T  21710666 attccaattatgatcaacatcaacaacatagattaaggaatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaa 21710764  T
Q  214 tcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccc 313  Q
    ||||| | |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710765 tcatcttaaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccc 21710864  T
Q  314 ttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710865 ttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 21710943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 31 - 392
Target Start/End: Complemental strand, 20851423 - 20851062
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| ||||||    ||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||     
T  20851423 aaactaaacatcaacaacatcaattctattcattcaagcattcatgcaaggcttccaaaattcattcatcatattctattttcattccaattacgatcag 20851324  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20851323 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20851224  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851223 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20851124  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851123 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 20851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 31 - 392
Target Start/End: Complemental strand, 20858050 - 20857689
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| ||||||    ||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||     
T  20858050 aaactaaacatcaacaacatcaattctattcattcaagcattcatgcaaggcttccaaaattcattcatcatattctattttcattccaattacgatcag 20857951  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20857950 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20857851  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857850 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20857751  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857750 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 20857689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 31 - 392
Target Start/End: Original strand, 21706040 - 21706401
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| ||||||    ||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||     
T  21706040 aaactaaacatcaacaacatcaattctattcattcaagcattcatgcaaggcttccaaaattcattcatcatattctattttcattccaattacgatcag 21706139  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  21706140 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 21706239  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706240 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 21706339  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706340 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 21706401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 363  Q
    ||||||||| |||||||||| ||  |||||| ||||||||||||||||||||||||||| |   | ||||| ||||||||||||| |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 321
Target Start/End: Complemental strand, 19663794 - 19663517
Alignment:
Q  45 caacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaacaacatgg 144  Q
    ||||||||||||||  ||||| | || ||| ||||||||||   |||| ||||| || |||||| |||||||||||||  |||| ||| |||||  || |    
T  19663794 caacaacaattcagatcattctaacaatcacacaaaacttctccaatttatccaacagattctaatttcattccaattctgatc-acagcaacattatag 19663696  T
Q  145 attaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt-- 242  Q
    ||||||||||||| || | ||||||| |||||||    |||| | ||||||| ||| || |||||||||||| ||| |||||| |  |||||||||||      
T  19663695 attaagaaatcattctgaacatcaaattacaacacattaaacataattcttacaccattcctttcaaaatcagcatcaaccctaa--ttcccaattttta 19663598  T
Q  243 accttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
      || ||||||| ||||   |  |  ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  19663597 ttctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 321
Target Start/End: Original strand, 32651345 - 32651627
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattac-gatcaacatcaac 137  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||   |||| ||||| || |||||| | |||||| || | | ||||| || ||||    
T  32651345 catcaacaacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaatctcattcaaaattctgatca-cagcaac 32651443  T
Q  138 aacatggattaagaaatcatactaatca-tcaaagtaca-acattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
    |  || |||||||||||||| |||| || | ||| || | |||||||| |  ||||||||| ||| |  |||||||| ||| ||| |||||| |||  ||    
T  32651444 attatagattaagaaatcattctaaacactaaaactaaacacattaaaca--tgattcttacaccatccctttcaaa-tcagcatcaaccctaatt--cc 32651538  T
Q  236 caattttacctt--aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||||   ||  |||||||  |||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  32651539 caatttttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 18712780 - 18712854
Alignment:
Q  248 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||    
T  18712780 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 23 - 392
Target Start/End: Original strand, 16090831 - 16091201
Alignment:
Q  23 aggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaatt 122  Q
    ||||| || |||||||||||||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  16090831 aggaacagcaactaaacatcaacaacatcaattcagcccaatcaagcattcattcagaacttccaaaattcatccatcatattctattttcatttcaatt 16090930  T
Q  123 acgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta 222  Q
    |||||||| |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  16090931 acgatcaatatcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcatta 16091030  T
Q  223 acccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16091031 acccttattttcccaattttaccttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T
Q  323 aattgcaaagacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16091131 aattgcaaagacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 16091201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 23 - 392
Target Start/End: Complemental strand, 29181408 - 29181038
Alignment:
Q  23 aggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaatt 122  Q
    ||||| || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  29181408 aggaacagcaactaaacatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaatt 29181309  T
Q  123 acgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta 222  Q
    |||||||| |||||||||||||||||||||||||||||||||||  || |||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  29181308 acgatcaatatcaacaacatggattaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcatta 29181209  T
Q  223 acccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29181208 acccttattttccaaattttaccttaagaatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T
Q  323 aattgcaaagacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29181108 aattgcaaagacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 29181038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 15 - 392
Target Start/End: Complemental strand, 20906767 - 20906391
Alignment:
Q  15 gacatcacaggaatagaaa-ctaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttc 113  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  || |||||||||||||||||||||||    
T  20906767 gacatcaaaggaacagaaaactaaacatcaacaacaacaattcagcccattcaagcattcttacaaaacttctcaa-ttcatccatcatattctattttc 20906669  T
Q  114 attccaattacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaa 213  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20906668 atttcaattacgatcaacatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaa 20906569  T
Q  214 tcatcattaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccc 313  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20906568 tcatcattaacccttaatt-cccaattttaccttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccaccc 20906470  T
Q  314 ttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20906469 ttaccttagaattgcaaggacaaatagctcagcaaatccgttcctaagttcttctctcttggtcttctccccttgcctt 20906391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 15 - 228
Target Start/End: Original strand, 2966713 - 2966926
Alignment:
Q  15 gacatcacaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttca 114  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2966713 gacatcacaggaacagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttca 2966812  T
Q  115 ttccaattacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2966813 ttccaattacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaa 2966912  T
Q  215 catcattaaccctt 228  Q
    ||||||||||||||    
T  2966913 catcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 222 - 392
Target Start/End: Original strand, 2971209 - 2971379
Alignment:
Q  222 aacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  322 gaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2971309 gaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 2971379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 37 - 382
Target Start/End: Original strand, 2465134 - 2465474
Alignment:
Q  37 aacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttcattccaattacgatcaacatca 135  Q
    |||||||||||||||||||||  | | |||| ||||||| || ||||| ||||| ||||||||| ||||||||  ||||| ||||||| |||||||||||    
T  2465134 aacatcaacaacaacaattcattcaaatcaa-cattcattcagaactttcaaaacttcatccattatattctaccttcat-ccaattatgatcaacatca 2465231  T
Q  136 acaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
    |||| |  || || ||||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| ||    
T  2465232 acaatacagagtaggaaatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttccc 2465329  T
Q  236 caattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 335  Q
     | ||||||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||| |    
T  2465330 aatttttaccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaagata 2465429  T
Q  336 attagcacagcaaatcagttcctaagttcttctctcttggtcttctc 382  Q
    |  ||  ||||||| || || ||||| ||||||||||||||||||||    
T  2465430 a--agtgcagcaaaccaatttctaagctcttctctcttggtcttctc 2465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 263 - 392
Target Start/End: Complemental strand, 14319688 - 14319559
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 362  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  14319688 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 14319589  T
Q  363 tcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||| ||||||||||||||||||    
T  14319588 tcttctctcttagtcttctctccttgcctt 14319559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 39 - 382
Target Start/End: Complemental strand, 3857647 - 3857308
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttcattccaattacgatcaacatcaac 137  Q
    |||||||||||||||||||  | | |||| ||||||| || ||||| ||||| |||||| || ||||||||  ||||| |||||||  ||||||||||||    
T  3857647 catcaacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatctattatattctaccttcat-ccaattataatcaacatcaac 3857549  T
Q  138 aacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccca 237  Q
    || |  || || ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| ||||    
T  3857548 aatacagagtaggaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-ccca 3857452  T
Q  238 atttt---accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagac 334  Q
    |||||   ||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||| ||||     
T  3857451 atttttttaccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc-aagat 3857354  T
Q  335 aattagcacagcaaatcagttcctaagttcttctctcttggtcttctc 382  Q
    ||  ||  ||||||| || || ||||| ||||||||||||||||||||    
T  3857353 aa--agtgcagcaaaccaatttctaagctcttctctcttggtcttctc 3857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 43 - 392
Target Start/End: Original strand, 14230558 - 14230906
Alignment:
Q  43 aacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaacaacat 142  Q
    ||||||| ||||||||||||||| | || ||||||| ||||| |  ||||||| || |   | ||| |||||||||||||  || ||  | ||||| |||    
T  14230558 aacaacatcaattcagcccattccaacaatcatacacaactttctcaattcattcaaccagtcctaatttcattccaattcagaacat-agcaacatcat 14230656  T
Q  143 ggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatca---tcattaacccttattttcccaat 239  Q
     ||||||||||||||||  |  |||||| ||||||||   |||| ||||||||| |||||| ||||||||||||   ||||  ||||| ||| ||  |||    
T  14230657 agattaagaaatcatacagaatatcaaattacaacatattaaacatgattcttacaccttt-ctttcaaaatcagtctcat--accctaattctc--aat 14230751  T
Q  240 tttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 337  Q
    |||| ||| ||||||  |||  || ||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||     
T  14230752 tttatcttcaagaactattcttttagattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaa 14230851  T
Q  338 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
     |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  14230852 aagcacgacaaatccgttcctaagttctcctctcttggtcttctctccttgcctt 14230906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 392
Target Start/End: Original strand, 14567204 - 14567329
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 366  Q
    ||||||||||||  ||||||||| |  |||||| | ||  | ||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  14567204 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 14567303  T
Q  367 ctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||| ||||||||||||    
T  14567304 ctctcttggtcttttctccttgcctt 14567329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 329
Target Start/End: Complemental strand, 21231242 - 21230952
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||   |||| ||||| || |||||| |||||||| ||||  |||| ||| |||||    
T  21231242 catcaacaacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacagattctaatttcattcaaattctgatc-acaacaaca 21231144  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
      || |||||||||||||| || | || |||| |||||||    |||| ||||||||| ||| || |||||| ||||| ||| |||||| |  |||||||    
T  21231143 ttatagattaagaaatcattctgaacaccaaattacaacacattaaacatgattcttacaccattcctttcagaatcagcatcaaccctaa--ttcccaa 21231046  T
Q  239 -ttttaccttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
     ||||| || ||||||| ||||   |  |  ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231045 tttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 31155396 - 31155463
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 31155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 323  Q
    |||||||||||||||||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 13679494 - 13679548
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  13679494 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 15168176 - 15168230
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 12709895 - 12709843
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12709895 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 13122966 - 13122914
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13122966 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 13743712 - 13743764
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13743712 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 16677296 - 16677348
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  16677296 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 17651532 - 17651584
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  17651532 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 31 - 392
Target Start/End: Complemental strand, 24320961 - 24320600
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| ||||||    ||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||     
T  24320961 aaactaaacatcaacaacatcaattctattcattcaagcattcatgcaaggcttccaaaattcattcatcatattctattttcattccaattacgatcag 24320862  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||| |     
T  24320861 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaa 24320762  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320761 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 24320662  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320661 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 24320600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 39 - 321
Target Start/End: Complemental strand, 29643668 - 29643386
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    ||||| ||||||||||||||  ||||| |||| |||||||||||||| | |||||||||| |||||||||||||||||||||||  |||||  |||||||    
T  29643668 catcatcaacaacaattcagagcattctagcaatcatacaaaacttc-acaattcatccaacatattctattttcattccaattctgatcacaatcaaca 29643570  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
      || ||||||||||||||||| | || |||| |||||||  |  ||||  ||||||| |||  | ||| | |||||||||| ||||||||  ||| |||    
T  29643569 ttatagattaagaaatcatactgaacaccaaattacaacacaattaacccaattcttacaccaatccttcctaaatcatcatcaaccctta-attctcaa 29643471  T
Q  239 ttttacctt-aagaacagttcaa-ttgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||| ||| | ||||| ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29643470 ttttatcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 392
Target Start/End: Original strand, 44477623 - 44477749
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 364  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    | |||||| ||||  |||   |||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44477721  T
Q  365 ttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||||    
T  44477722 ttctctcttggtcttctctccttgcctt 44477749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 392
Target Start/End: Original strand, 44492781 - 44492907
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 364  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    | |||||| ||||  |||   |||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44492879  T
Q  365 ttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||||    
T  44492880 ttctctcttggtcttctctccttgcctt 44492907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 18614240 - 18614327
Alignment:
Q  236 caattttacctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||||| ||| ||||||| |||||||| || |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18614240 caattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 23482192 - 23482053
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 279  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23482192 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23482095  T
Q  280 tatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23482094 tatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 23866618 - 23866670
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23866618 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 23 - 360
Target Start/End: Complemental strand, 16147129 - 16146791
Alignment:
Q  23 aggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaatt 122  Q
    ||||| || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  16147129 aggaacagcaactaaacatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaatt 16147030  T
Q  123 acgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta 222  Q
    |||||||| |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  16147029 acgatcaatatcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcatta 16146930  T
Q  223 acccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16146929 acccttattttccaaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T
Q  323 aattgcaaagacaattagcacagc-aaatcagttcctaa 360  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  16146829 aattgcaaagacaaatagcacagcaaaatcagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 329
Target Start/End: Original strand, 27906142 - 27906328
Alignment:
Q  144 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 242  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  27906142 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctc--aatttt 27906239  T
Q  243 acctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
    | ||| ||||||  ||| |||  |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906240 atcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 208 - 319
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q  208 tcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataa 305  Q
    ||||||||||||| |||||| || |||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||  |||||| ||||     
T  14486601 tcaaaatcatcatcaaccct-atattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatag 14486699  T
Q  306 tcccacccttacct 319  Q
    || |||||||||||    
T  14486700 tctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 323
Target Start/End: Original strand, 15407911 - 15408196
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    |||||| |||||||||||||  ||||| | || ||||||||||||||   |||| ||||| |  |||||| |||||||| ||||  ||||| || |||||    
T  15407911 catcaaaaacaacaattcagatcattctaacaatcatacaaaacttctccaatttatccaaccgattctaatttcattcaaattctgatca-cagcaaca 15408009  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
      || |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || ||| |||||||| ||| |||||| |||| |||||    
T  15408010 ttatagattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttaaaccattccttccaaaatcagcatcaaccctaattt-cccaa 15408108  T
Q  239 ttttacctt-aagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 323  Q
    ||||   || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  15408109 ttttcatttcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 392
Target Start/End: Original strand, 53483708 - 53483831
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 367  Q
    |||||| ||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   ||||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 53483806  T
Q  368 tctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||| |||||    
T  53483807 tctcttggtcttctctcctagcctt 53483831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 11848114 - 11848169
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 8045884 - 8045832
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 39 - 392
Target Start/End: Complemental strand, 50254 - 49899
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  50254 catcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaaca 50155  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
    |||||||||||||||||||||||||| |  || || ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50154 acatggattaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaa 50055  T
Q  239 -ttttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 337  Q
     ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  50054 tttttaccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaa 49955  T
Q  338 tagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||    
T  49954 tagcacaacaaaatcagttcctaagttcttctctcttggttttctctctttgcctt 49899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 31 - 392
Target Start/End: Original strand, 19236665 - 19237025
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| ||||||    ||||||||||||||| |||  |||||||||||||| ||||||| |||||||||||||||||||||||||     
T  19236665 aaactaaacatcaacaacatcaattctattcattcaagcattcatgcaaggcttccaaaattcattcatcatactctattttcattccaattacgatcag 19236764  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| |||||||||  |||||||| | ||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  19236765 catcaacaacatagattaagaacacatactaaac-tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 19236863  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236864 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 19236963  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236964 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 19237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 31 - 392
Target Start/End: Original strand, 22460920 - 22461281
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| ||||||    ||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||     
T  22460920 aaactaaacatcaacaacatcaattctattcattcaagcattcatgcaaggcttccaaaattcattcatcatattctattttcattccaattacgatcag 22461019  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |     
T  22461020 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaa 22461118  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22461119 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22461218  T
Q  330 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22461219 aagacaaaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgcctt 22461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 31 - 392
Target Start/End: Original strand, 22467544 - 22467905
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| ||||||    |||||||| |||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||     
T  22467544 aaactaaacatcaacaacatcaattctattcattcaagaattcatgcaaggcttccaaaattcattcatcatattctattttcattccaattacgatcag 22467643  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |     
T  22467644 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaa 22467742  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22467743 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22467842  T
Q  330 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22467843 aagacaaaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgcctt 22467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 37 - 391
Target Start/End: Original strand, 20772741 - 20773090
Alignment:
Q  37 aacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttcattccaattacgatcaacatca 135  Q
    ||||||||||||||||||| |  ||| |||| ||||||| || ||||||||||| ||||||||| |||||||| |||||| ||||||| |||||||||||    
T  20772741 aacatcaacaacaacaattaactccaatcaaacattcattcagaacttccaaaacttcatccattatattctactttcat-ccaattatgatcaacatca 20772839  T
Q  136 acaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
    |||| || || || ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| | |||||    
T  20772840 acaatatagagtaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcc 20772937  T
Q  236 caattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  20772938 caattttaccttaagaacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagata 20773037  T
Q  336 attagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 391  Q
    |  || ||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  20773038 a--agtacagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 20773090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 37 - 391
Target Start/End: Original strand, 20781516 - 20781865
Alignment:
Q  37 aacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttcattccaattacgatcaacatca 135  Q
    ||||||||||||||||||| |  ||| |||| ||||||| || ||||||||||| ||||||||| |||||||| |||||| ||||||| |||||||||||    
T  20781516 aacatcaacaacaacaattaactccaatcaaacattcattcagaacttccaaaacttcatccattatattctactttcat-ccaattatgatcaacatca 20781614  T
Q  136 acaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
    |||| || || || ||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| | |||||    
T  20781615 acaatatagagtaggaaatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcc 20781712  T
Q  236 caattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |    
T  20781713 caattttaccttaagaacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgcaaagata 20781812  T
Q  336 attagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 391  Q
    |  || ||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  20781813 a--agtacagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 20781865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 39 - 391
Target Start/End: Complemental strand, 24930211 - 24929862
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaa-ttacgatcaacatcaac 137  Q
    ||||||||||||||||| |  ||| |||| ||||||| || ||||||||| ||||||| ||||||||||||||||| ||||| ||| |||||| ||||||    
T  24930211 catcaacaacaacaattaactccaatcaaacattcattcagaacttccaacattcatctatcatattctattttcactccaaattatgatcaatatcaac 24930112  T
Q  138 aacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccca 237  Q
    |  || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||| ||| || |||||||||||||||| | |||||||    
T  24930111 attatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttccca 24930014  T
Q  238 attttaccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    |||||||||||||||||||| |||||||||| |||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  24930013 attttaccttaagaacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaagataa 24929914  T
Q  337 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 391  Q
      ||  |||||| ||| |||||||| |||||||||||||||||||| ||||||||    
T  24929913 --agtgcagcaagtcaattcctaagctcttctctcttggtcttctc-ccttgcct 24929862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 32 - 392
Target Start/End: Complemental strand, 28909577 - 28909220
Alignment:
Q  32 aactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaac 131  Q
    |||||||||| |||||||||||| ||||||| ||| ||||||||||| ||  ||| |||||||| ||| | || || ||||||| ||||||| |||||||    
T  28909577 aactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttcat-ccaattatgatcaac 28909479  T
Q  132 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 231  Q
    | || | | |  ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| |||    
T  28909478 aacagcgatacagattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaatt 28909381  T
Q  232 ttcccaatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||| |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  28909380 ttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaa 28909281  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
     |||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28909280 cgacaa-aagcacagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28909220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 32 - 392
Target Start/End: Complemental strand, 28945972 - 28945615
Alignment:
Q  32 aactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaac 131  Q
    |||||||||| |||||||||||| ||||||| ||| ||||||||||| ||  ||| |||||||| ||| | || || ||||||| ||||||| |||||||    
T  28945972 aactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttcat-ccaattatgatcaac 28945874  T
Q  132 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 231  Q
    | || | | |  ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| |||    
T  28945873 aacagcgatacagattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaatt 28945776  T
Q  232 ttcccaatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||| |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  28945775 ttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaa 28945676  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
     |||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28945675 cgacaa-aagcacagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28945615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 21 - 392
Target Start/End: Complemental strand, 28896340 - 28895972
Alignment:
Q  21 acaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaa 120  Q
    ||||||| || |||||||||| |||||||||||| ||||||| ||| ||||||||||| ||  ||| |||||||| ||| | || || ||||||| ||||    
T  28896340 acaggaacagcaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttcat-ccaa 28896242  T
Q  121 ttacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcat 220  Q
    ||| |||||||| || | | |  ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| ||||||||||||    
T  28896241 ttatgatcaacaacagcgatacagattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcat 28896144  T
Q  221 taacccttattttcccaatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
     || ||| |||||||||||||| |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||    
T  28896143 caaacctaattttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttacct 28896044  T
Q  320 tagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||| | |||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28896043 tagaattgcaacggcaa-aagcacagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28895972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 21 - 392
Target Start/End: Complemental strand, 28925166 - 28924798
Alignment:
Q  21 acaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaa 120  Q
    ||||||| || |||||||||| |||||||||||| ||||||| ||| ||||||||||| ||  ||| |||||||| ||| | || || ||||||| ||||    
T  28925166 acaggaacagcaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttcat-ccaa 28925068  T
Q  121 ttacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcat 220  Q
    ||| |||||||| || | | |  ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| ||||||||||||    
T  28925067 ttatgatcaacaacagcgatacagattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcat 28924970  T
Q  221 taacccttattttcccaatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
     || ||| |||||||||||||| |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||    
T  28924969 caaacctaattttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttacct 28924870  T
Q  320 tagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||| | |||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28924869 tagaattgcaacggcaa-aagcacagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28924798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 21 - 392
Target Start/End: Complemental strand, 28889636 - 28889268
Alignment:
Q  21 acaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaa 120  Q
    ||||||| || |||||||||| |||||||||||| ||||||| ||| ||||||||||| ||  ||| |||||||| ||| | || || ||||||| ||||    
T  28889636 acaggaacagcaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttcat-ccaa 28889538  T
Q  121 ttacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcat 220  Q
    ||| |||||||| || | | |  ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| ||||||||||||    
T  28889537 ttatgatcaacaacagcgatacagattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcat 28889440  T
Q  221 taacccttattttcccaatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
     || ||| |||||||||||||| |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||    
T  28889439 caaacctaattttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttacct 28889340  T
Q  320 tagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||| | |||  ||||  |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28889339 tagaattgcaacggcaa-aagcaatgcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28889268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 20819975 - 20820279
Alignment:
Q  21 acaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcataca-aaacttccaaaattcatccatcatattctattttcattcca 119  Q
    ||||||| || |||||||||| ||||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||| ||| | || |||||| ||| |||    
T  20819975 acaggaacagcaactaaacataaacaacaacaatttagcccaatcaagcattcatacagaaaattccaaa-ttcatacataacatgctatttgcat-cca 20820072  T
Q  120 attacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatca 219  Q
    |||| |||||||  |||||| |   |||| | | ||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| |||||||||||    
T  20820073 attatgatcaactacaacaatactaattaggga-tcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatca 20820169  T
Q  220 ttaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
    |||||||| ||||||| ||||||||||||||||| ||| ||||  |||||  |||||||||||||||||  ||||||||||||| |||||||||||||||    
T  20820170 ttaaccctaattttcc-aattttaccttaagaacggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttacct 20820268  T
Q  320 tagaattgcaa 330  Q
    |||||||||||    
T  20820269 tagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 20827075 - 20827379
Alignment:
Q  21 acaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcataca-aaacttccaaaattcatccatcatattctattttcattcca 119  Q
    ||||||| || |||||||||| ||||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||| ||| | || |||||| ||| |||    
T  20827075 acaggaacagcaactaaacataaacaacaacaatttagcccaatcaagcattcatacagaaaattccaaa-ttcatacataacatgctatttgcat-cca 20827172  T
Q  120 attacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatca 219  Q
    |||| |||||||  |||||| |   |||| | | ||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| |||||||||||    
T  20827173 attatgatcaactacaacaatactaattaggga-tcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatca 20827269  T
Q  220 ttaacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
    |||||||| ||||||| ||||||||||||||||| ||| ||||  |||||  |||||||||||||||||  ||||||||||||| |||||||||||||||    
T  20827270 ttaaccctaattttcc-aattttaccttaagaacggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttacct 20827368  T
Q  320 tagaattgcaa 330  Q
    |||||||||||    
T  20827369 tagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 28931280 - 28931061
Alignment:
Q  21 acaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaa 120  Q
    ||||||| || |||||||||| |||||||||||| ||||||| ||| ||||||||||| ||  ||| |||||||| ||| | || || |||||| |||||    
T  28931280 acaggaacagcaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttca-tccaa 28931182  T
Q  121 ttacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcat 220  Q
    ||| |||||||| || | | |  ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | |||||||  |||| ||||||    
T  28931181 ttatgatcaacaacagcgatacagattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacccattttcttcaaaaaccatcat 28931083  T
Q  221 taacccttattttcccaatttt 242  Q
     || ||| ||||||||||||||    
T  28931082 caaacctaattttcccaatttt 28931061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 144 - 329
Target Start/End: Original strand, 34829962 - 34830146
Alignment:
Q  144 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 242  Q
    ||||||||||||||||| ||||||||| |||||||    |||| ||||||||| | |||| |||||||||||| ||| | ||||| ||| ||  ||||||    
T  34829962 gattaagaaatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctc--aatttt 34830058  T
Q  243 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
    | ||| ||||||  ||| ||| |||| |||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830059 atcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 267 - 387
Target Start/End: Complemental strand, 38144591 - 38144472
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagca-aatcagttcctaagttct 365  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||  ||||| | |  |||| ||||||| |||| |||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga-atgatta-cacagcacaatcggttcctaagttct 38144494  T
Q  366 tctctcttggtcttctctcctt 387  Q
    ||||||||||||||||||||||    
T  38144493 tctctcttggtcttctctcctt 38144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 18408083 - 18407944
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 279  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  18408083 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 18407986  T
Q  280 tatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||||||||| |||||| ||||| || |||||||||||||    
T  18407985 tatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 23111339 - 23111200
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 279  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23111339 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23111242  T
Q  280 tatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23111241 tatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 323  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 23111482 - 23111436
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttc 85  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||    
T  23111482 catcaacaacaacaattcagaccattctagcaatcatacaaaacttc 23111436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 15 - 392
Target Start/End: Original strand, 135187 - 135563
Alignment:
Q  15 gacatcacaggaatagaa-actaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttc 113  Q
    ||||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  135187 gacatcaaaggaacagaacaataaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttcccaa-ttcatccatcatattctattttc 135285  T
Q  114 attccaattacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaa 213  Q
    |||||||||  |||||  ||||||||||| ||||||||||||||||||| ||||||| |||||||  | |||||||||||||| ||||||||||||||||    
T  135286 attccaattttgatcacgatcaacaacatagattaagaaatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaa 135384  T
Q  214 tcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacc 312  Q
    |||||||||||||||| || | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  135385 tcatcattaacccttaatt-ctcaattttacctttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacg 135483  T
Q  313 cttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  135484 cttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagctcttctctcttggtcttctctccttgcctt 135563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 31 - 369
Target Start/End: Original strand, 10341 - 10679
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| |||||| |  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  10341 aaactaaacatcaacaacatcaattcggttcattcaagcattcatgcaaagcttccaaaattcatccatcatattctattttcattccaattacgatcag 10440  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || |||||| || | |||||||||||||||||||||||| |||||||| |     
T  10441 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaa 10540  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10541 tttcccaattttaccttaagaacaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaa 10640  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctc 369  Q
    ||||||  |||||||||||||||||||||||| ||||||    
T  10641 agacaaaaagcacagcaaatcagttcctaagtccttctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 31 - 371
Target Start/End: Complemental strand, 25181212 - 25180880
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||| ||||||||||||||| ||||||||||||        || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25181212 aaactaaacattaacaacaacaattcaacccattcaagca--------aagcttccaaaattcatccatcatattctattttcattccaattacgatcaa 25181121  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| | || |||||||||   |||||||||||||||||||||||| |||||||| |     
T  25181120 catcaacaacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaaa 25181021  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25181020 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 25180921  T
Q  331 agacaattagcacagcaaatcagttcctaagttcttctctc 371  Q
    ||||||  |||||||||||||||||||||||||||||||||    
T  25180920 agacaaaaagcacagcaaatcagttcctaagttcttctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 263 - 392
Target Start/End: Complemental strand, 27207778 - 27207649
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 362  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27207778 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 27207679  T
Q  363 tcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||||||    
T  27207678 tcttctctcttggtcttctctccttgcctt 27207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 263 - 392
Target Start/End: Original strand, 26885179 - 26885307
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 362  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||| ||||||||||    
T  26885179 gattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagt 26885277  T
Q  363 tcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||| |||||||||||||||    
T  26885278 tcttctctcttggttttctctccttgcctt 26885307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 144 - 392
Target Start/End: Complemental strand, 23168480 - 23168229
Alignment:
Q  144 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 242  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23168480 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23168383  T
Q  243 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 337  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23168382 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23168284  T
Q  338 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
     ||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  23168283 aagcacagcaaaaccgtccctaagttcttctctcttggtcttctctccttgcctt 23168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 144 - 392
Target Start/End: Complemental strand, 23579737 - 23579486
Alignment:
Q  144 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 242  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23579737 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23579640  T
Q  243 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 337  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23579639 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23579541  T
Q  338 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
     ||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  23579540 aagcacagcaaaaccgtccctaagttcttctctcttggtcttctctccttgcctt 23579486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 321
Target Start/End: Original strand, 23265058 - 23265197
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 280  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23265058 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23265156  T
Q  281 atatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23265157 atatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 321
Target Start/End: Original strand, 23280126 - 23280265
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 280  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23280126 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23280224  T
Q  281 atatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23280225 atatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 27366566 - 27366477
Alignment:
Q  304 aatcccacccttaccttagaattgcaaagacaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||| ||||||||||||||||||||||||||||  |   |||||||| ||  ||||  |||||||||||||||||||||||||||||||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgcctt 27366477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 392
Target Start/End: Complemental strand, 5706075 - 5705952
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 367  Q
    |||||| ||||||| ||||||| || ||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   ||||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 5705977  T
Q  368 tctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||| |||||    
T  5705976 tctcttggtcttctctcctagcctt 5705952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 247; Significance: 1e-137; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 31 - 392
Target Start/End: Complemental strand, 20008238 - 20007877
Alignment:
Q  31 aaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaa 130  Q
    ||||||||||||||||||| ||||||    ||||||||||||||| |||  |||| ||||||||| |||||||||||||||||||||||||||||||||     
T  20008238 aaactaaacatcaacaacatcaattctattcattcaagcattcatgcaaggcttctaaaattcattcatcatattctattttcattccaattacgatcag 20008139  T
Q  131 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 230  Q
    ||||||||| || |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20008138 catcaacaatatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20008039  T
Q  231 tttcccaattttaccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20008038 tttcccaattttaccttaagaacagttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgca 20007939  T
Q  330 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20007938 aagacaa-aagcacagcaaatgagttcctaagttcttctctcttggtcttctctccttgcctt 20007877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 39 - 391
Target Start/End: Complemental strand, 9099354 - 9099005
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaa-ttacgatcaacatcaac 137  Q
    ||||||||||||||||| |  ||| |||| ||||||| || ||||||||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||    
T  9099354 catcaacaacaacaattaactccaatcaaacattcattcagaacttccaaaattcatctatcatattctattttcactccaaattatgatcaatatcaac 9099255  T
Q  138 aacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccca 237  Q
    || || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |||||||    
T  9099254 aatatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttccca 9099157  T
Q  238 attttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  9099156 attttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa 9099057  T
Q  337 ttagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 391  Q
      ||  |||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  9099056 --agtgcagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 9099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 37 - 382
Target Start/End: Complemental strand, 21364763 - 21364423
Alignment:
Q  37 aacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttcattccaattacgatcaacatca 135  Q
    |||||||||||||||||||||  | | |||| ||||||| || ||||| ||||| ||||||||| ||||||||  ||||| ||||||| |||||||||||    
T  21364763 aacatcaacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatccattatattctaccttcat-ccaattatgatcaacatca 21364665  T
Q  136 acaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
    |||| |  || || ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| ||    
T  21364664 acaatacagagtaggaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cc 21364568  T
Q  236 caattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 335  Q
    |||||||||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| ||||||||||||||    
T  21364567 caattttaccataa-aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagaca 21364469  T
Q  336 attagcacagcaaatcagttcctaagttcttctctcttggtcttctc 382  Q
    |  ||||||||||| || |||||| ||||||||||||||||||||||    
T  21364468 a-aagcacagcaaaacaattcctaggttcttctctcttggtcttctc 21364423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 37 - 382
Target Start/End: Complemental strand, 23968745 - 23968405
Alignment:
Q  37 aacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttcattccaattacgatcaacatca 135  Q
    |||||||||||||||||||||  | | |||| ||||||| || ||||| ||||| ||||||||| ||||||||  ||||| ||||||| |||||||||||    
T  23968745 aacatcaacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatccattatattctaccttcat-ccaattatgatcaacatca 23968647  T
Q  136 acaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
    |||| |  || || ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| ||    
T  23968646 acaatacagagtaggaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cc 23968550  T
Q  236 caattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagaca 335  Q
    |||||||||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| ||||||||||||||    
T  23968549 caattttaccataa-aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagaca 23968451  T
Q  336 attagcacagcaaatcagttcctaagttcttctctcttggtcttctc 382  Q
    |  ||||||||||| || |||||| ||||||||||||||||||||||    
T  23968450 a-aagcacagcaaaacaattcctaggttcttctctcttggtcttctc 23968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 392
Target Start/End: Original strand, 31252300 - 31252549
Alignment:
Q  144 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 242  Q
    ||||||||||||||||  | ||||||| |||||||    |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  31252300 gattaagaaatcatacatagcatcaaattacaacacgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 31252396  T
Q  243 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 338  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||        
T  31252397 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaa 31252496  T
Q  339 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    | |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  31252497 aacacagc-aatcggttcctaagttcttctctcttggtcttctctccttgcctt 31252549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 269 - 392
Target Start/End: Complemental strand, 11288721 - 11288601
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 368  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||  | |||||| |||||||||||||| ||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaa-aaacacagc-aatcagttcctaagctcttct 11288624  T
Q  369 ctcttggtcttctctccttgcctt 392  Q
    |||||||||||||| |||||||||    
T  11288623 ctcttggtcttctc-ccttgcctt 11288601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 29097637 - 29097789
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttca-ttccaattacgatcaacatcaa 136  Q
    ||||||||||||||||| |  ||| |||| ||||||| || ||||||||||| |||||| || |||||||||||||| ||| ||||| |||||| |||||    
T  29097637 catcaacaacaacaattaactccaatcaaacattcattcagaacttccaaaaattcatctattatattctattttcacttcaaattatgatcaatatcaa 29097736  T
Q  137 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctga 190  Q
    ||  || ||||| ||||||||||||||||||||| ||||||| || ||||||||    
T  29097737 cattatagattaggaaatcatactaatcatcaaa-tacaacagtataaacctga 29097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 15458492 - 15458559
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15458559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 15465087 - 15465154
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 34640041 - 34639915
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 364  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34639943  T
Q  365 ttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||||    
T  34639942 ttctctcttggtcttctctccttgcctt 34639915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 34646715 - 34646589
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 364  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34646617  T
Q  365 ttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||||    
T  34646616 ttctctcttggtcttctctccttgcctt 34646589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 321
Target Start/End: Original strand, 9187268 - 9187550
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||   |||| ||||| || |||||| |||||||| ||||  |||| ||| |||||    
T  9187268 catcaacaacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaaca-attctaatttcattcaaattctgatc-acaacaaca 9187365  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
      || |||||||||||||| || | ||  ||| |||||||    |||| ||||||||| | | || |||||||||||| ||| |||||| |  |||||||    
T  9187366 ttatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaaccctaa--ttcccaa 9187463  T
Q  239 -ttttacctt-aagaacagttcaatt-gat-taattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
     |||||  || ||||||| ||||||| ||| || |||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  9187464 tttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 28288537 - 28288442
Alignment:
Q  294 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||| ||||| || ||||||||||||||||||||||||||||  | |||||| |||||||||||||| | |||||||||||||||||| |||||||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaa-aaacacagc-aatcagttcctaagcttttctctcttggtcttctc-ccttgcctt 28288442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
    |||||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 24563475 - 24563564
Alignment:
Q  304 aatcccacccttaccttagaattgcaaagacaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    |||| ||||||||||||||||||||||||||||  |   |||||||| ||  ||||  |||||||||||||||||||||||||||||||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgcctt 24563564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 24513126 - 24513048
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattc 117  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||   |||| ||||| || |||||| ||||||||    
T  24513126 catcaacaacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaatttcattc 24513048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 392
Target Start/End: Complemental strand, 24641644 - 24641612
Alignment:
Q  360 agttcttctctcttggtcttctctccttgcctt 392  Q
    |||||||||||||||||||||||||||||||||    
T  24641644 agttcttctctcttggtcttctctccttgcctt 24641612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 930150 - 930095
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  930150 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 18800438 - 18800493
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||| ||||    
T  18800438 aattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 25598415 - 25598461
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttc 85  Q
    |||||||||||||||||||  |||||| |||| ||||||||||||||    
T  25598415 catcaacaacaacaattcataccattctagcaatcatacaaaacttc 25598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 19884235 - 19884287
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||| |||||||    
T  19884235 tttcagaaattatagattatgattattgagagatagtctcaccctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 38 - 327
Target Start/End: Original strand, 9108 - 9396
Alignment:
Q  38 acatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaac 137  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||  |||||  ||||||    
T  9108 acatcaacaacaacaattcagcccattcaagcaatcatacaaaacttcccaa-ttcatccatcatattctattttcgttccaattctgatcacaatcaac 9206  T
Q  138 aacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccca 237  Q
    ||||| |||| |||||||||||||| ||||||| |||||||  | |||||| ||||||| ||||||||||||||||||||||||||||||||  ||||||    
T  9207 aacatagattgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaaccctta-attccca 9305  T
Q  238 attttac-cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 327  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9306 attttacttttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 163; Significance: 6e-87; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 183 - 392
Target Start/End: Complemental strand, 2051 - 1842
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaatta 281  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  2051 aaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgattaattttcagaaatta 1953  T
Q  282 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttct 381  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  1952 tatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttct 1853  T
Q  382 ctccttgcctt 392  Q
    |||||||||||    
T  1852 ctccttgcctt 1842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 160; Significance: 4e-85; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 21 - 392
Target Start/End: Original strand, 754 - 1121
Alignment:
Q  21 acaggaatagaaactaaacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaa 120  Q
    ||||||| || |||||||||| |||||||||||| ||||||| ||||||||| ||||| ||  ||| |||||||| ||| | || |||||||||| ||||    
T  754 acaggaacagcaactaaacataaacaacaacaatccagcccaatcaagcattaatacagaaaatcccaaattcatacataacatgctattttcat-ccaa 852  T
Q  121 ttacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcat 220  Q
    ||| |||||||| |||||  || |||    || || ||||||||||||||  ||||| ||| |||||| | ||||| || ||||||| |||||||  |||    
T  853 ttatgatcaacaacaacattatagatcggaaactcttactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccat 950  T
Q  221 taacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctt 320  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||    
T  951 taaccctaattttcccaattttaccataagaacagttaaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttacctt 1050  T
Q  321 agaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  1051 agaattgcaaagacaa-aagcacagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 136; Significance: 8e-71; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 38 - 336
Target Start/End: Original strand, 1129 - 1424
Alignment:
Q  38 acatcaacaacaacaattcagcccattcaagcattcataca-aaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaa 136  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||  ||| | || |||||||||| ||||||| |||||||| |||    
T  1129 acatcaacaacaacaattcagcccaatcaagcattcatacagaaacttccaaa-ttcacacataacatgctattttcat-ccaattatgatcaacaacaa 1226  T
Q  137 caacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttccc 236  Q
    ||| |  ||||| ||||||||||||||||||||  || ||||||  |||||||| |||||  | ||||||| ||||||||||||||  ||| ||||||||    
T  1227 caatacagattaggaaatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttccc 1324  T
Q  237 aattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||||||||||||||||||| ||||| ||||||||||||||  ||||||||  |||||||||||  |||||||||||||||||||||||||||||||||    
T  1325 aattttaccttaagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaa 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 37 - 363
Target Start/End: Complemental strand, 16347 - 16023
Alignment:
Q  37 aacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctatttt-cattccaattacgatcaacatca 135  Q
    ||||| |||||||||||||||   || |||| ||||||| || ||||||||||| || || ||||||||||||||| || | |||||| |||||| || |    
T  16347 aacataaacaacaacaattcattacaatcaa-cattcattcagaacttccaaaactcttctatcatattctatttttcacttcaattatgatcaatatga 16249  T
Q  136 acaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
    |||| || |||||  |||||||||||||||||||| |||||||| |  ||||||||||||  || ||||||| ||||||||||||||||||| | || ||    
T  16248 acaatatagattagaaaatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaatt-cc 16152  T
Q  236 caattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagac 334  Q
     | ||||| ||||| ||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |   |     
T  16151 aatttttatcttaaaaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaag 16052  T
Q  335 aattagcacagcaaatcagttcctaagtt 363  Q
    ||||| ||||||||||||| |||||||||    
T  16051 aattaacacagcaaatcagctcctaagtt 16023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 113; Significance: 4e-57; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 37 - 382
Target Start/End: Complemental strand, 91487 - 91144
Alignment:
Q  37 aacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttcattccaattacgatcaacatca 135  Q
    |||||||||||||||||||||  | | |||| ||||||| || ||||| ||||| ||||||||| ||||||||  ||||| ||||||| |||||||||||    
T  91487 aacatcaacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatccattatattctaccttcat-ccaattatgatcaacatca 91389  T
Q  136 acaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
     ||| |  || || ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| ||    
T  91388 ccaatacagagtaggaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cc 91292  T
Q  236 caatttt---accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 332  Q
    |||||||   ||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  91291 caatttttttaccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaag 91192  T
Q  333 acaattagcacagcaaatcagttcctaagttcttctctcttggtcttctc 382  Q
    | ||  ||  ||||||| || || ||||| ||||||||||||||||||||    
T  91191 ataa--agtgcagcaaaccaatttctaagctcttctctcttggtcttctc 91144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 37 - 382
Target Start/End: Complemental strand, 97213 - 96870
Alignment:
Q  37 aacatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaa-ttcatccatcatattctattttcattccaattacgatcaacatca 135  Q
    |||||||||||||||||||||  | | |||| ||||||| || ||||| ||||| ||||||||| ||||||||  ||||| ||||||| |||||||||||    
T  97213 aacatcaacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatccattatattctaccttcat-ccaattatgatcaacatca 97115  T
Q  136 acaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcc 235  Q
     ||| |  || || ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| ||    
T  97114 ccaatacagagtaggaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cc 97018  T
Q  236 caatttt---accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 332  Q
    |||||||   ||| ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  97017 caatttttttaccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaag 96918  T
Q  333 acaattagcacagcaaatcagttcctaagttcttctctcttggtcttctc 382  Q
    | ||  ||  ||||||| || || ||||| ||||||||||||||||||||    
T  96917 ataa--agtgcagcaaaccaatttctaagctcttctctcttggtcttctc 96870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 392
Target Start/End: Original strand, 10016 - 10364
Alignment:
Q  41 tcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaacaac 140  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||   |||| ||||| || |||||| | || |   ||||  ||||| || |||||      
T  10016 tcaacaacaacaattcagaccattctagcaatcatacaaaacttctccaatttatccaacaaattctaatctcctcataattctgatca-caacaacatt 10114  T
Q  141 atggattaagaaatcatactaatcatcaaagtaca-acattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaat 239  Q
    || |||||||||||||| |||| ||  ||| || | |||||||| |  ||||||||| ||| |  |||||||||| | ||| |||||| |||  ||||||    
T  10115 atagattaagaaatcattctaaacactaaactaaacacattaaaca--tgattcttacaccatccctttcaaaattagcatcaaccctaatt--cccaat 10210  T
Q  240 tttac-cttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaatt 338  Q
    ||||  || | ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||| | ||||||      
T  10211 tttattctcatgaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgtagagacaaaa 10310  T
Q  339 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10311 agcacagcaaatccgttcctaagttcttctctcttggtcttctctccttgcctt 10364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 392
Target Start/End: Complemental strand, 493162 - 492958
Alignment:
Q  188 tgattcttataccttttctttcaaaatcatcatta-acccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatat 284  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||| ||   |||||| ||  ||||||  ||| ||| |||||||||||||||||||||     
T  493162 tgattcttacaccttttctttcaaaatcagcattataccctaattctct--attttatctccaagaactattccattagattaattttcagaaattatac 493065  T
Q  285 attatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctc 384  Q
    |||| || ||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  493064 atta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttctctc 492966  T
Q  385 cttgcctt 392  Q
    ||||||||    
T  492965 cttgcctt 492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 10250 - 10125
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 366  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  367 ctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||    
T  10150 ctctcttggtcttctctccttgcctt 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 363
Target Start/End: Complemental strand, 11111 - 11042
Alignment:
Q  294 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 363  Q
    |||||| ||||||||||||||||||||||||||  |   | ||||| ||||||||||||| |||||||||    
T  11111 attgaaggataatcccacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaagtt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 1580 - 1455
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 366  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  367 ctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||    
T  1480 ctctcttggtcttctctccttgcctt 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 144 - 392
Target Start/End: Complemental strand, 6035 - 5786
Alignment:
Q  144 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 242  Q
    ||||||||||||||||  | ||||||| ||||||||   |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  6035 gattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 5939  T
Q  243 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 338  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||        
T  5938 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaagaa 5839  T
Q  339 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 392  Q
    | |||||| |||| |||||  |||||||||||||||||||||||||||||||||    
T  5838 aacacagc-aatcggttccctagttcttctctcttggtcttctctccttgcctt 5786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 263 - 392
Target Start/End: Complemental strand, 3461 - 3332
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 362  Q
    ||||||||||||||||||||||||||     |||||||||||||  ||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  3461 gattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagt 3362  T
Q  363 tcttctctcttggtcttctctccttgcctt 392  Q
    ||| |||||||||||||||||| |||||||    
T  3361 tctcctctcttggtcttctctcgttgcctt 3332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 391
Target Start/End: Original strand, 6 - 125
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 368  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||  ||  |||||| ||| |||||||| ||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaagtcaattcctaagctcttct 103  T
Q  369 ctcttggtcttctctccttgcct 391  Q
    |||||||||||||| ||||||||    
T  104 ctcttggtcttctc-ccttgcct 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 323
Target Start/End: Original strand, 135245 - 135530
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaaca 138  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||   ||||  |||| |  |||||| |||||||| ||||  |||| ||| |||||    
T  135245 catcaacaacaacaattcagatcattccagcaatcatacaaaacttctccaatttttccaaccgattctaatttcattcaaattctgatc-acaacaaca 135343  T
Q  139 acatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaa 238  Q
      || |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || |     
T  135344 ttatagattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaat 135443  T
Q  239 ttttaccttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 323  Q
    ||||| || ||||||| ||||   |  |  ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  135444 ttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 144 - 329
Target Start/End: Complemental strand, 23748 - 23562
Alignment:
Q  144 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 242  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||||||||| | ||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23748 gattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctc--aatttt 23651  T
Q  243 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
      ||| ||||||  |||  || ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23650 gtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 13947 - 13880
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 336  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 13880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 329
Target Start/End: Complemental strand, 40793 - 40524
Alignment:
Q  61 cattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaacaacatggattaagaaatcatact 160  Q
    ||||| |||| ||||||||||||||   |||| ||||| |  |||||| |||||||| ||||  ||||| ||||||||  || |||||||||||||| ||    
T  40793 cattctagcaatcatacaaaacttctccaatttatccaaccgattctaatttcattcaaattctgatca-catcaacattatagattaagaaatcattct 40695  T
Q  161 aatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagttcaa 260  Q
     | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | ||||| || ||||||| ||||     
T  40694 gaacatcaaattacaacacgttaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaatttttatctcaagaacaattcat 40595  T
Q  261 ttgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
     | |  |  |||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  40594 gttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 392
Target Start/End: Original strand, 111686 - 111812
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 364  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 111784  T
Q  365 ttctctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||||||||||||    
T  111785 ttctctcttggtcttctctccttgcctt 111812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 320
Target Start/End: Original strand, 12776 - 13019
Alignment:
Q  90 attcatccatcatattctatttt-cattccaatt--acgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaac 186  Q
    ||||||| ||||||||||||||| || ||||| |  | |||||| |||||||  || ||||| |||||||||||||||||  || |||||||||| ||||    
T  12776 attcatctatcatattctatttttcactccaaattaatgatcaatatcaacattatagattaggaaatcatactaatcatacaaatacaacattataaac 12875  T
Q  187 ct-gattcttataccttttctttcaaaatcat-cattaacccttattttccc--aattttacc-ttaagaacagttcaa---ttgattaa-ttttcagaa 277  Q
    || ||||||||   | |||| |||| |||||| |||||||||| | ||||||  | ||||||| |||||||||||| ||   | |||||| |||| ||||    
T  12876 ctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaatttttacctttaagaacagttaaaatttagattaattttttagaa 12975  T
Q  278 attatatattatgactattg-aaagataatcccacccttacctt 320  Q
    || ||||||||  ||||||| |||||||||||||||||||||||    
T  12976 atcatatattagaactattgtaaagataatcccacccttacctt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 329
Target Start/End: Original strand, 73161 - 73347
Alignment:
Q  144 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 242  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||| ||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  73161 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctc--aatttt 73258  T
Q  243 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 329  Q
    | ||| |||| |  | | ||| |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| | |||||||    
T  73259 atcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacctcataattgca 73347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 326
Target Start/End: Complemental strand, 10609 - 10546
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatt 326  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||    
T  10609 gattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 321
Target Start/End: Original strand, 16736 - 16875
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 279  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  16736 aaacatgattcttaaaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 16833  T
Q  280 tatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  16834 tatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 3980 - 3921
Alignment:
Q  15 gacatcacaggaatagaaa-ctaaacatcaacaacaacaattcagcccattcaagcattc 73  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  3980 gacatcaaaggaacagaaaactaaacatcaacaacaacaattcagcccattcaagcattc 3921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 717 - 770
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 321
Target Start/End: Complemental strand, 34555 - 34276
Alignment:
Q  43 aacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaacaacat 142  Q
    ||||||||||||||||  ||||| | || ||| ||||||||||   |||| ||||| || |||||| |||||||||||||  |||| ||| |||||  ||    
T  34555 aacaacaacaattcagatcattctaacaatcacacaaaacttctccaatttatccaacagattctaatttcattccaattctgatc-acagcaacattat 34457  T
Q  143 ggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt 242  Q
     |||||||||||||| || | ||||||| |||||||    |||| | ||||||| ||| || |||||||||||| ||| |||||| |  |||||||||||    
T  34456 agattaagaaatcattctgaacatcaaattacaacacattaaacataattcttacaccattcctttcaaaatcagcatcaaccctaa--ttcccaatttt 34359  T
Q  243 --accttaagaacagttca--attgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
        || ||||||| ||||   |  |  ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  34358 tattctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 321
Target Start/End: Original strand, 13548 - 13687
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 279  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  13548 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 13645  T
Q  280 tatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  13646 tatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 116877 - 116951
Alignment:
Q  248 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  116877 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 379
Target Start/End: Complemental strand, 22646 - 22536
Alignment:
Q  268 attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc-aaatcagttcctaagttctt 366  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||||||||||| || ||||  ||| |  | ||||||| ||||| ||||||| | ||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgc--agaaatattgcacagcaaaatcggttcctaggctctt 22549  T
Q  367 ctctcttggtctt 379  Q
    |||||||||||||    
T  22548 ctctcttggtctt 22536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 22875 - 22792
Alignment:
Q  39 catcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaatt 122  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||   |||| ||| | || |||||| |||||||| ||||    
T  22875 catcaacaacaacaattcaggtcattctagcaatcatacaaaacttctccaatttatcaaacagattctaatttcattcaaatt 22792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 392
Target Start/End: Complemental strand, 45326 - 45203
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 367  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||| |||| |||||||    | |||||| ||||  |||   ||||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 45228  T
Q  368 tctcttggtcttctctccttgcctt 392  Q
    ||||||||||||||||||| |||||    
T  45227 tctcttggtcttctctcctagcctt 45203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 147 - 8
Alignment:
Q  183 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 279  Q
    |||| ||||||||| ||| || |||||||||||| ||  |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  147 aaacatgattcttacaccattcctttcaaaatcagcaacaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 50  T
Q  280 tatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  49 tatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 102002 - 101928
Alignment:
Q  248 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||| ||||||| ||| ||||||||| ||||||||| ||||| |||||| ||||| || |||||||||||||    
T  102002 aagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 363
Target Start/End: Complemental strand, 1784 - 1691
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 363  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  1784 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 363
Target Start/End: Complemental strand, 5807 - 5714
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 363  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  5807 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 5714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 323  Q
    ||||||||||||||||| ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 319  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 932 - 987
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  932 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  8077 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 18170 - 18225
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  18170 aattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

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Target: scaffold1461 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 1543 - 1485
Alignment:
Q  263 gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    ||||||||||||||||||  |||||| ||  |||| ||||||||| |||||||||||||    
T  1543 gattaattttcagaaattgcatattaagatcattgcaagataatctcacccttacctta 1485  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 1387 - 1441
Alignment:
Q  267 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 321  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  1387 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold1773 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 1181 - 1242
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 331  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaa 1242  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 1950 - 1897
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

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Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 8627 - 8574
Alignment:
Q  269 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 294 - 346
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||||||||||| ||||||  |||||| ||||| || ||||||||||||||    
T  294 tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 50182 - 50234
Alignment:
Q  270 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 322  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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