View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9838_high_7 (Length: 240)
Name: NF9838_high_7
Description: NF9838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9838_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 10316183 - 10315960
Alignment:
| Q |
1 |
aattctcttcatgatgaaattagagcttccatttattctactgaaattgctcattctagagattggaacaattcatagcttgaaagtgattctttgttaa |
100 |
Q |
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| T |
10316183 |
aattctcttcatgatgaaattagagcttccatttattctactgaaattgctcattctatagattggaacaattcatggcttgaaagtgattctttgttaa |
10316084 |
T |
|
| Q |
101 |
ctatttaagatttctctaacattaatattgttccttgaaatctgcnnnnnnngtggaataattgtttgtgtccattactgcaccatgtgtattttgagaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
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|
| T |
10316083 |
ctatttaagatttctctaacattaatattgttccttgaaatctgcaaaacaagtggaataattgtttgtgtccattactgtaccatgtgtattttgagaa |
10315984 |
T |
|
| Q |
201 |
aaatatgaattaactcgttagagg |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
10315983 |
aaatatgaattaactcgttagagg |
10315960 |
T |
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