View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9838_low_10 (Length: 332)
Name: NF9838_low_10
Description: NF9838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9838_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 321
Target Start/End: Original strand, 26546804 - 26547106
Alignment:
| Q |
19 |
taagccctctaaaatcctttttcaactatttcttgaattcttcgtacgatgaataaaaataaacccccaataagttggaaactatatatctttttctcga |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| |
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| T |
26546804 |
taagccctctaaaatcctttttcaactatttcttgaatgcttcatacgatgaagaaaaataaaccctcaataggttggaaactatatatctttttctcga |
26546903 |
T |
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| Q |
119 |
aaccctttcccctttaaacttccaaatatggccttggaatcaccagatttagagcttagcttctgttgtcttgttttgttactttgtttccatttgatca |
218 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26546904 |
aaccctttcccctttaaacttccaaatgtggccttggaatcaccagatttagagcttagcttctgttgtcttgttttgttactttgtttccatttgatca |
26547003 |
T |
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| Q |
219 |
ataataataaataaatactctatgatacacatgatatttgttcaaagaaaacaaccctaaacctatctataactgacttgacatctccctctttactttt |
318 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
26547004 |
ataataataaataaatactctatgctacacatgatatttgttcaaagaaaacaaccctaaacctatctataactgacttgatatctccctctttactttt |
26547103 |
T |
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| Q |
319 |
cat |
321 |
Q |
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||| |
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| T |
26547104 |
cat |
26547106 |
T |
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