View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9838_low_12 (Length: 270)

Name: NF9838_low_12
Description: NF9838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9838_low_12
NF9838_low_12
[»] chr3 (73 HSPs)
chr3 (22-237)||(14438587-14438801)
chr3 (22-232)||(758265-758474)
chr3 (22-232)||(23666020-23666229)
chr3 (22-232)||(24038268-24038477)
chr3 (22-237)||(49971316-49971530)
chr3 (22-232)||(7571115-7571324)
chr3 (22-224)||(29350227-29350428)
chr3 (22-231)||(18467212-18467420)
chr3 (22-234)||(55431302-55431513)
chr3 (22-232)||(3418982-3419190)
chr3 (22-231)||(3672573-3672781)
chr3 (22-231)||(3692605-3692813)
chr3 (22-232)||(20520041-20520250)
chr3 (24-232)||(39775625-39775832)
chr3 (22-231)||(8069667-8069874)
chr3 (22-231)||(8883157-8883365)
chr3 (22-232)||(18471995-18472203)
chr3 (65-232)||(23661361-23661527)
chr3 (22-231)||(3033631-3033839)
chr3 (22-231)||(8887917-8888125)
chr3 (58-236)||(27708959-27709136)
chr3 (22-232)||(32474576-32474784)
chr3 (22-232)||(3657137-3657346)
chr3 (22-232)||(12965770-12965979)
chr3 (22-232)||(12971530-12971739)
chr3 (24-228)||(25726690-25726897)
chr3 (124-232)||(2207646-2207754)
chr3 (22-232)||(12112538-12112747)
chr3 (51-232)||(46964031-46964211)
chr3 (106-232)||(55325847-55325972)
chr3 (100-231)||(6596255-6596385)
chr3 (22-166)||(29715631-29715774)
chr3 (22-160)||(28125104-28125242)
chr3 (23-126)||(26962050-26962152)
chr3 (32-126)||(20090664-20090757)
chr3 (32-126)||(20095789-20095882)
chr3 (32-126)||(34129171-34129264)
chr3 (29-126)||(13022024-13022120)
chr3 (29-126)||(33089345-33089441)
chr3 (23-126)||(15768193-15768295)
chr3 (32-126)||(17364063-17364158)
chr3 (32-126)||(3476948-3477041)
chr3 (32-126)||(15763032-15763125)
chr3 (32-126)||(17368719-17368812)
chr3 (29-126)||(20810369-20810465)
chr3 (22-75)||(27708865-27708918)
chr3 (29-126)||(53119524-53119620)
chr3 (32-126)||(17357836-17357931)
chr3 (32-126)||(3482425-3482518)
chr3 (32-126)||(54270644-54270737)
chr3 (29-126)||(2617258-2617355)
chr3 (29-126)||(38436993-38437089)
chr3 (29-231)||(10586082-10586281)
chr3 (23-126)||(27605137-27605240)
chr3 (32-126)||(55128790-55128883)
chr3 (50-126)||(16013724-16013801)
chr3 (42-201)||(20507663-20507818)
chr3 (25-76)||(2207759-2207810)
chr3 (23-126)||(4117602-4117704)
chr3 (34-129)||(10321444-10321538)
chr3 (32-126)||(30341846-30341939)
chr3 (23-126)||(7806556-7806656)
chr3 (31-126)||(21494304-21494399)
chr3 (144-218)||(28125251-28125323)
chr3 (34-78)||(1688936-1688980)
chr3 (23-126)||(48432398-48432501)
chr3 (23-126)||(48435830-48435933)
chr3 (23-78)||(6024110-6024165)
chr3 (174-231)||(31002834-31002892)
chr3 (29-67)||(53358239-53358277)
chr3 (20-49)||(6596401-6596430)
chr3 (22-51)||(23661527-23661556)
chr3 (152-231)||(47567093-47567172)
[»] chr4 (86 HSPs)
chr4 (22-232)||(37259774-37259983)
chr4 (22-232)||(31273510-31273719)
chr4 (22-232)||(37264461-37264670)
chr4 (34-237)||(31729279-31729481)
chr4 (22-232)||(31269023-31269232)
chr4 (22-232)||(16421018-16421227)
chr4 (22-231)||(19101966-19102174)
chr4 (22-237)||(5271311-5271525)
chr4 (22-232)||(8693700-8693909)
chr4 (22-232)||(55251709-55251917)
chr4 (22-229)||(51697906-51698111)
chr4 (22-232)||(5928116-5928325)
chr4 (22-232)||(47244237-47244446)
chr4 (22-231)||(13521887-13522098)
chr4 (23-232)||(13059400-13059607)
chr4 (22-232)||(12823798-12824001)
chr4 (22-232)||(33463253-33463462)
chr4 (22-201)||(42758683-42758861)
chr4 (22-231)||(19106608-19106805)
chr4 (22-232)||(19541058-19541267)
chr4 (22-231)||(8030374-8030582)
chr4 (22-218)||(12878228-12878421)
chr4 (22-232)||(33468870-33469079)
chr4 (22-231)||(47574614-47574817)
chr4 (23-232)||(48276546-48276749)
chr4 (22-203)||(32082017-32082196)
chr4 (22-126)||(31765875-31765979)
chr4 (22-228)||(12874528-12874733)
chr4 (27-232)||(19906245-19906448)
chr4 (84-217)||(4551048-4551180)
chr4 (115-231)||(8649528-8649643)
chr4 (115-231)||(8661335-8661450)
chr4 (22-214)||(2819833-2820024)
chr4 (32-126)||(653043-653136)
chr4 (23-126)||(10120811-10120913)
chr4 (22-103)||(51696991-51697072)
chr4 (32-126)||(36354176-36354269)
chr4 (32-126)||(36359294-36359387)
chr4 (32-126)||(39999069-39999162)
chr4 (32-126)||(40004027-40004120)
chr4 (32-126)||(53797629-53797722)
chr4 (32-126)||(54348357-54348450)
chr4 (22-118)||(13065778-13065874)
chr4 (32-126)||(8980287-8980380)
chr4 (32-126)||(8985407-8985500)
chr4 (32-126)||(13700510-13700603)
chr4 (32-126)||(21299835-21299928)
chr4 (22-231)||(32545083-32545293)
chr4 (32-126)||(41393245-41393338)
chr4 (32-126)||(51019375-51019468)
chr4 (32-126)||(54343203-54343296)
chr4 (32-126)||(54991486-54991579)
chr4 (169-232)||(13065713-13065776)
chr4 (55-126)||(16953107-16953178)
chr4 (32-126)||(13695159-13695252)
chr4 (32-126)||(21304955-21305048)
chr4 (32-126)||(47046309-47046402)
chr4 (29-126)||(24490028-24490125)
chr4 (31-228)||(40408196-40408395)
chr4 (21-202)||(16947993-16948169)
chr4 (32-126)||(13710669-13710761)
chr4 (34-126)||(8083029-8083121)
chr4 (22-62)||(32221163-32221203)
chr4 (174-231)||(7903005-7903063)
chr4 (22-126)||(1151299-1151404)
chr4 (165-232)||(15134283-15134350)
chr4 (173-231)||(55810176-55810234)
chr4 (44-126)||(16595936-16596017)
chr4 (44-126)||(20513118-20513199)
chr4 (174-231)||(41816922-41816980)
chr4 (33-126)||(9764023-9764115)
chr4 (29-231)||(3997956-3998155)
chr4 (38-98)||(30564444-30564504)
chr4 (23-126)||(33722922-33723025)
chr4 (166-232)||(39217286-39217356)
chr4 (22-73)||(6070576-6070627)
chr4 (29-68)||(10318839-10318878)
chr4 (25-92)||(52691091-52691158)
chr4 (44-126)||(15020468-15020549)
chr4 (174-231)||(31298287-31298345)
chr4 (197-231)||(34560588-34560622)
chr4 (29-67)||(39319628-39319666)
chr4 (159-189)||(55073320-55073350)
chr4 (29-62)||(34560494-34560527)
chr4 (29-126)||(34644554-34644651)
chr4 (191-231)||(39319730-39319770)
[»] chr2 (47 HSPs)
chr2 (22-232)||(1934890-1935099)
chr2 (22-237)||(9180616-9180830)
chr2 (22-237)||(9189695-9189909)
chr2 (22-232)||(31326728-31326936)
chr2 (22-231)||(30658252-30658460)
chr2 (22-232)||(25497223-25497431)
chr2 (22-232)||(29677756-29677965)
chr2 (22-232)||(30650918-30651127)
chr2 (22-234)||(12796914-12797125)
chr2 (22-228)||(10160626-10160830)
chr2 (22-232)||(18344420-18344629)
chr2 (22-232)||(25478195-25478403)
chr2 (22-232)||(19892363-19892572)
chr2 (22-207)||(29677370-29677554)
chr2 (22-231)||(35601911-35602119)
chr2 (22-228)||(7737752-7737957)
chr2 (22-232)||(28603287-28603501)
chr2 (22-231)||(19094388-19094601)
chr2 (22-231)||(30631568-30631780)
chr2 (22-224)||(19578320-19578520)
chr2 (22-229)||(21523625-21523825)
chr2 (22-174)||(42926714-42926867)
chr2 (22-232)||(40847496-40847701)
chr2 (22-232)||(17545195-17545405)
chr2 (22-169)||(35638957-35639103)
chr2 (144-221)||(17453488-17453564)
chr2 (29-126)||(42914639-42914735)
chr2 (32-126)||(42723453-42723546)
chr2 (32-126)||(42728622-42728715)
chr2 (32-126)||(44096302-44096395)
chr2 (32-126)||(44754598-44754691)
chr2 (32-126)||(44759764-44759857)
chr2 (31-126)||(5089277-5089371)
chr2 (32-126)||(40518474-40518567)
chr2 (23-126)||(160031-160134)
chr2 (32-126)||(28751731-28751824)
chr2 (29-231)||(6297785-6297984)
chr2 (23-126)||(44957439-44957542)
chr2 (32-126)||(40392319-40392412)
chr2 (31-77)||(39542900-39542946)
chr2 (29-76)||(19538382-19538429)
chr2 (174-231)||(19538523-19538581)
chr2 (22-104)||(20711434-20711516)
chr2 (174-231)||(28855143-28855200)
chr2 (32-201)||(32079377-32079546)
chr2 (23-75)||(14104580-14104633)
chr2 (23-67)||(39542566-39542610)
[»] chr7 (62 HSPs)
chr7 (22-234)||(4930222-4930433)
chr7 (22-234)||(44423032-44423243)
chr7 (30-231)||(23866065-23866265)
chr7 (22-232)||(26341188-26341397)
chr7 (22-201)||(4579497-4579675)
chr7 (22-232)||(44510574-44510783)
chr7 (22-231)||(9650862-9651073)
chr7 (22-232)||(13314134-13314342)
chr7 (22-232)||(27238231-27238440)
chr7 (22-232)||(3357528-3357738)
chr7 (22-232)||(25543259-25543468)
chr7 (22-232)||(8268282-8268492)
chr7 (22-201)||(23246861-23247039)
chr7 (22-232)||(10388264-10388471)
chr7 (22-218)||(8076039-8076227)
chr7 (83-228)||(12799460-12799604)
chr7 (22-232)||(3879985-3880193)
chr7 (22-232)||(12254068-12254276)
chr7 (22-218)||(9008152-9008346)
chr7 (100-232)||(30258167-30258298)
chr7 (22-232)||(21671184-21671393)
chr7 (46-221)||(3284740-3284915)
chr7 (103-234)||(42626486-42626616)
chr7 (22-232)||(16372387-16372595)
chr7 (57-231)||(6590877-6591054)
chr7 (56-232)||(13142798-13142973)
chr7 (93-232)||(26287042-26287180)
chr7 (22-126)||(29150923-29151027)
chr7 (27-111)||(42627214-42627298)
chr7 (158-231)||(3045679-3045752)
chr7 (32-126)||(33238002-33238095)
chr7 (32-126)||(47998975-47999068)
chr7 (29-126)||(9973459-9973555)
chr7 (29-126)||(24528351-24528447)
chr7 (32-126)||(2234632-2234725)
chr7 (32-126)||(16539414-16539507)
chr7 (32-126)||(16626155-16626248)
chr7 (32-126)||(32212656-32212749)
chr7 (32-126)||(33243179-33243272)
chr7 (32-126)||(42571945-42572038)
chr7 (32-126)||(47993800-47993893)
chr7 (34-126)||(33226416-33226507)
chr7 (32-126)||(21081041-21081136)
chr7 (32-126)||(47177121-47177214)
chr7 (29-231)||(27256239-27256438)
chr7 (29-125)||(28292506-28292600)
chr7 (141-232)||(23318092-23318182)
chr7 (32-126)||(12934397-12934490)
chr7 (32-126)||(17495403-17495496)
chr7 (32-126)||(17557718-17557811)
chr7 (174-231)||(40865252-40865310)
chr7 (32-126)||(43892858-43892951)
chr7 (83-207)||(45748562-45748688)
chr7 (35-171)||(15642236-15642371)
chr7 (156-231)||(19640418-19640494)
chr7 (23-98)||(30256844-30256919)
chr7 (41-126)||(19309613-19309697)
chr7 (32-76)||(22857738-22857782)
chr7 (44-126)||(1289335-1289416)
chr7 (24-90)||(23317989-23318053)
chr7 (46-91)||(29478191-29478236)
chr7 (22-66)||(26287220-26287264)
[»] chr5 (60 HSPs)
chr5 (22-232)||(37248693-37248901)
chr5 (22-237)||(7451747-7451961)
chr5 (22-232)||(29167870-29168079)
chr5 (22-232)||(12103014-12103223)
chr5 (22-232)||(39523038-39523247)
chr5 (22-232)||(26667261-26667470)
chr5 (22-232)||(26938858-26939067)
chr5 (22-232)||(39518399-39518608)
chr5 (22-231)||(556684-556892)
chr5 (22-231)||(561456-561664)
chr5 (22-232)||(35679773-35679980)
chr5 (22-231)||(36942163-36942371)
chr5 (22-232)||(6155316-6155525)
chr5 (22-232)||(10759718-10759925)
chr5 (22-232)||(12501796-12502005)
chr5 (22-232)||(36428698-36428907)
chr5 (22-231)||(36937409-36937617)
chr5 (22-232)||(41587059-41587266)
chr5 (22-231)||(3665921-3666129)
chr5 (30-231)||(32461447-32461647)
chr5 (22-231)||(12045037-12045245)
chr5 (22-232)||(36423626-36423835)
chr5 (22-231)||(41996654-41996857)
chr5 (22-231)||(42001423-42001626)
chr5 (22-232)||(6514497-6514707)
chr5 (22-232)||(20180960-20181169)
chr5 (22-232)||(40147884-40148093)
chr5 (22-232)||(12102727-12102937)
chr5 (22-232)||(12041829-12042040)
chr5 (40-232)||(11981177-11981366)
chr5 (22-224)||(15414787-15414987)
chr5 (26-230)||(16116151-16116351)
chr5 (22-126)||(37652832-37652936)
chr5 (32-126)||(13582692-13582785)
chr5 (100-232)||(4871989-4872120)
chr5 (32-126)||(24435871-24435964)
chr5 (29-126)||(7805068-7805164)
chr5 (29-126)||(14374132-14374228)
chr5 (140-231)||(9726586-9726676)
chr5 (32-126)||(36253826-36253919)
chr5 (32-126)||(17510058-17510151)
chr5 (153-228)||(34707439-34707513)
chr5 (28-231)||(13301381-13301585)
chr5 (32-126)||(24771359-24771452)
chr5 (29-126)||(28857858-28857956)
chr5 (32-126)||(42019573-42019666)
chr5 (22-228)||(9911142-9911344)
chr5 (23-126)||(1414053-1414155)
chr5 (32-126)||(26709102-26709197)
chr5 (32-126)||(26978836-26978931)
chr5 (32-126)||(17504953-17505046)
chr5 (32-126)||(41858593-41858686)
chr5 (29-231)||(21323865-21324064)
chr5 (29-231)||(31731540-31731739)
chr5 (186-231)||(1429893-1429938)
chr5 (23-126)||(24776814-24776919)
chr5 (83-126)||(37550034-37550077)
chr5 (32-78)||(41853548-41853594)
chr5 (44-126)||(18265507-18265588)
chr5 (29-78)||(31986723-31986772)
[»] scaffold0352 (1 HSPs)
scaffold0352 (22-234)||(7093-7304)
[»] chr8 (65 HSPs)
chr8 (22-237)||(1807461-1807676)
chr8 (22-231)||(31449764-31449972)
chr8 (22-232)||(33416536-33416744)
chr8 (22-232)||(44925821-44926029)
chr8 (22-234)||(18876262-18876472)
chr8 (22-232)||(40125782-40125991)
chr8 (22-220)||(19166623-19166820)
chr8 (22-228)||(36683568-36683773)
chr8 (22-232)||(1910866-1911075)
chr8 (22-232)||(34118455-34118664)
chr8 (22-229)||(2965620-2965825)
chr8 (22-232)||(17025924-17026133)
chr8 (22-232)||(17556416-17556625)
chr8 (28-214)||(38182152-38182337)
chr8 (22-232)||(24090616-24090820)
chr8 (22-201)||(15875596-15875774)
chr8 (22-201)||(17953800-17953979)
chr8 (22-219)||(23548542-23548738)
chr8 (22-214)||(28559570-28559760)
chr8 (22-232)||(28564717-28564927)
chr8 (22-232)||(28572340-28572550)
chr8 (105-231)||(43302589-43302714)
chr8 (100-228)||(15951456-15951583)
chr8 (22-135)||(43302712-43302825)
chr8 (140-231)||(4238239-4238330)
chr8 (22-106)||(4238337-4238421)
chr8 (140-231)||(4242978-4243069)
chr8 (22-106)||(4243076-4243160)
chr8 (31-126)||(33616729-33616823)
chr8 (32-126)||(32015700-32015793)
chr8 (22-92)||(40130722-40130792)
chr8 (29-126)||(19430011-19430107)
chr8 (29-126)||(19435513-19435609)
chr8 (29-126)||(19566160-19566256)
chr8 (29-126)||(19571662-19571758)
chr8 (29-126)||(31030525-31030621)
chr8 (32-126)||(17955791-17955884)
chr8 (32-129)||(24884712-24884808)
chr8 (36-126)||(21644083-21644172)
chr8 (32-126)||(42514376-42514469)
chr8 (31-200)||(7902561-7902729)
chr8 (23-126)||(13584341-13584451)
chr8 (23-126)||(43999232-43999334)
chr8 (166-232)||(17020470-17020536)
chr8 (166-232)||(17550907-17550973)
chr8 (174-231)||(34818598-34818656)
chr8 (24-231)||(37771703-37771907)
chr8 (22-126)||(2355461-2355565)
chr8 (100-195)||(10933499-10933592)
chr8 (186-229)||(8331258-8331301)
chr8 (64-167)||(12820370-12820472)
chr8 (23-109)||(19954262-19954348)
chr8 (174-228)||(25367882-25367937)
chr8 (44-126)||(2469986-2470067)
chr8 (23-92)||(4544286-4544356)
chr8 (31-65)||(15951584-15951618)
chr8 (22-126)||(29220255-29220357)
chr8 (32-78)||(32010538-32010584)
chr8 (23-107)||(19949808-19949892)
chr8 (140-232)||(24673231-24673320)
chr8 (68-189)||(29220373-29220494)
chr8 (54-126)||(34517263-34517333)
chr8 (24-62)||(34818764-34818802)
chr8 (22-75)||(24673378-24673431)
chr8 (23-71)||(5883989-5884036)
[»] scaffold0182 (1 HSPs)
scaffold0182 (22-232)||(9784-9993)
[»] scaffold0002 (2 HSPs)
scaffold0002 (22-232)||(4063-4272)
scaffold0002 (60-234)||(443841-444011)
[»] chr6 (65 HSPs)
chr6 (22-232)||(11570646-11570855)
chr6 (53-232)||(17964456-17964634)
chr6 (22-232)||(6407758-6407966)
chr6 (53-237)||(16836048-16836231)
chr6 (22-232)||(2700004-2700212)
chr6 (22-232)||(12688960-12689169)
chr6 (22-231)||(8747771-8747979)
chr6 (22-232)||(33687500-33687709)
chr6 (22-231)||(24589062-24589270)
chr6 (22-228)||(29892162-29892367)
chr6 (22-218)||(20748196-20748390)
chr6 (22-232)||(12406250-12406459)
chr6 (104-232)||(11534608-11534735)
chr6 (104-232)||(11560118-11560245)
chr6 (22-163)||(21309020-21309160)
chr6 (22-190)||(13736617-13736784)
chr6 (46-232)||(14508997-14509182)
chr6 (22-199)||(25316494-25316672)
chr6 (22-199)||(26203988-26204166)
chr6 (22-182)||(11614039-11614198)
chr6 (92-232)||(19995300-19995439)
chr6 (149-232)||(11428124-11428207)
chr6 (84-228)||(4157270-4157413)
chr6 (25-214)||(9751724-9751912)
chr6 (29-126)||(19478145-19478241)
chr6 (22-105)||(19674302-19674385)
chr6 (28-126)||(12183002-12183100)
chr6 (32-126)||(22698245-22698338)
chr6 (32-126)||(31981560-31981653)
chr6 (29-126)||(3901909-3902006)
chr6 (29-126)||(13605094-13605190)
chr6 (53-217)||(22609587-22609750)
chr6 (22-174)||(22695226-22695377)
chr6 (32-126)||(34142080-34142173)
chr6 (32-126)||(34154696-34154789)
chr6 (22-97)||(11428032-11428108)
chr6 (101-201)||(15991668-15991767)
chr6 (101-201)||(15999330-15999429)
chr6 (32-126)||(21396699-21396792)
chr6 (32-126)||(24192482-24192575)
chr6 (32-126)||(29491239-29491332)
chr6 (29-126)||(10642706-10642803)
chr6 (22-70)||(11534736-11534784)
chr6 (22-70)||(11560246-11560294)
chr6 (28-126)||(5600974-5601072)
chr6 (32-122)||(21401755-21401844)
chr6 (32-126)||(24191385-24191478)
chr6 (32-126)||(34375919-34376012)
chr6 (44-109)||(35129640-35129704)
chr6 (193-228)||(25314358-25314393)
chr6 (193-228)||(26201852-26201887)
chr6 (29-67)||(11956762-11956800)
chr6 (32-126)||(22703368-22703461)
chr6 (29-126)||(5740792-5740889)
chr6 (191-232)||(11613664-11613705)
chr6 (29-78)||(17281613-17281662)
chr6 (22-62)||(2882821-2882861)
chr6 (184-228)||(21309164-21309208)
chr6 (22-73)||(2760297-2760348)
chr6 (36-126)||(2818149-2818238)
chr6 (52-126)||(32815065-32815138)
chr6 (32-65)||(6728397-6728430)
chr6 (30-127)||(12851809-12851906)
chr6 (22-62)||(2863518-2863558)
chr6 (184-232)||(5856158-5856206)
[»] chr1 (59 HSPs)
chr1 (22-215)||(10135445-10135637)
chr1 (22-232)||(19798910-19799119)
chr1 (22-237)||(10140078-10140299)
chr1 (22-233)||(16649509-16649718)
chr1 (22-232)||(33301077-33301286)
chr1 (22-232)||(26927619-26927828)
chr1 (22-232)||(40165969-40166178)
chr1 (22-232)||(23192715-23192923)
chr1 (23-207)||(47451147-47451330)
chr1 (22-232)||(51041360-51041567)
chr1 (100-234)||(25843823-25843956)
chr1 (27-228)||(38620687-38620886)
chr1 (22-229)||(18784457-18784654)
chr1 (22-232)||(39588264-39588473)
chr1 (63-232)||(8137969-8138137)
chr1 (22-212)||(16035597-16035784)
chr1 (22-162)||(47455353-47455492)
chr1 (22-224)||(11806348-11806549)
chr1 (22-106)||(3094103-3094187)
chr1 (29-126)||(10106100-10106196)
chr1 (22-162)||(12259985-12260124)
chr1 (22-91)||(25855160-25855229)
chr1 (29-126)||(38734272-38734368)
chr1 (140-231)||(3094194-3094285)
chr1 (32-126)||(5724979-5725072)
chr1 (32-126)||(36684717-36684810)
chr1 (29-126)||(13890810-13890906)
chr1 (29-126)||(39747167-39747263)
chr1 (22-232)||(28434471-28434679)
chr1 (32-126)||(3584601-3584694)
chr1 (32-126)||(11251115-11251208)
chr1 (87-232)||(16833538-16833682)
chr1 (32-126)||(34318226-34318319)
chr1 (32-126)||(37404418-37404511)
chr1 (29-126)||(26651168-26651264)
chr1 (23-126)||(2493820-2493923)
chr1 (23-126)||(36724698-36724801)
chr1 (29-231)||(41097851-41098050)
chr1 (32-126)||(5730105-5730198)
chr1 (44-126)||(12906166-12906246)
chr1 (32-126)||(37409539-37409632)
chr1 (29-126)||(5602427-5602523)
chr1 (32-126)||(27716443-27716536)
chr1 (159-231)||(8267729-8267802)
chr1 (29-126)||(14582096-14582192)
chr1 (22-126)||(8900243-8900347)
chr1 (23-126)||(27761841-27761944)
chr1 (23-76)||(4632978-4633031)
chr1 (32-117)||(11387841-11387925)
chr1 (22-75)||(16832090-16832143)
chr1 (23-78)||(19422927-19422982)
chr1 (29-67)||(8267891-8267929)
chr1 (44-126)||(23193225-23193306)
chr1 (44-126)||(33380923-33381004)
chr1 (22-118)||(5346652-5346748)
chr1 (23-126)||(24159801-24159904)
chr1 (54-126)||(48246685-48246756)
chr1 (51-92)||(25661858-25661899)
chr1 (177-232)||(25779211-25779270)
[»] scaffold0045 (1 HSPs)
scaffold0045 (22-231)||(83055-83260)
[»] scaffold0054 (2 HSPs)
scaffold0054 (22-232)||(25388-25597)
scaffold0054 (100-195)||(29222-29316)
[»] scaffold0012 (1 HSPs)
scaffold0012 (24-218)||(165998-166190)
[»] scaffold0008 (1 HSPs)
scaffold0008 (22-200)||(255806-255983)
[»] scaffold0057 (1 HSPs)
scaffold0057 (22-182)||(35623-35782)
[»] scaffold2020 (1 HSPs)
scaffold2020 (23-224)||(361-567)
[»] scaffold0009 (1 HSPs)
scaffold0009 (23-224)||(164928-165134)
[»] scaffold0240 (1 HSPs)
scaffold0240 (22-224)||(3980-4163)
[»] scaffold0128 (1 HSPs)
scaffold0128 (26-224)||(13265-13460)
[»] scaffold0132 (2 HSPs)
scaffold0132 (29-126)||(2774-2870)
scaffold0132 (29-126)||(10734-10830)
[»] scaffold0011 (4 HSPs)
scaffold0011 (29-126)||(1562-1658)
scaffold0011 (29-126)||(7043-7139)
scaffold0011 (157-201)||(146362-146406)
scaffold0011 (36-71)||(155552-155587)
[»] scaffold0060 (3 HSPs)
scaffold0060 (23-126)||(37001-37103)
scaffold0060 (29-231)||(47756-47955)
scaffold0060 (174-231)||(52799-52857)
[»] scaffold0055 (1 HSPs)
scaffold0055 (32-126)||(3058-3151)
[»] scaffold0052 (1 HSPs)
scaffold0052 (32-126)||(81384-81477)
[»] scaffold0594 (1 HSPs)
scaffold0594 (32-126)||(9210-9303)
[»] scaffold0166 (2 HSPs)
scaffold0166 (32-126)||(13742-13835)
scaffold0166 (23-126)||(19197-19302)
[»] scaffold0014 (2 HSPs)
scaffold0014 (32-126)||(31545-31638)
scaffold0014 (32-126)||(26373-26466)
[»] scaffold0067 (1 HSPs)
scaffold0067 (29-126)||(33970-34067)
[»] scaffold0020 (1 HSPs)
scaffold0020 (24-231)||(1125-1329)
[»] scaffold0517 (1 HSPs)
scaffold0517 (32-126)||(3563-3656)
[»] scaffold0184 (1 HSPs)
scaffold0184 (22-200)||(2298-2474)
[»] scaffold0061 (1 HSPs)
scaffold0061 (174-231)||(45922-45980)
[»] scaffold0017 (1 HSPs)
scaffold0017 (174-231)||(152807-152865)
[»] scaffold1050 (1 HSPs)
scaffold1050 (87-204)||(1194-1309)
[»] scaffold0690 (1 HSPs)
scaffold0690 (154-217)||(5410-5473)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-109)||(171734-171820)
[»] scaffold0015 (1 HSPs)
scaffold0015 (46-201)||(8903-9057)
[»] scaffold0097 (1 HSPs)
scaffold0097 (22-104)||(15273-15355)


Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 14438801 - 14438587
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  14438801 gttactaggttgagtcacgaccaggtcgccctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccagga 14438702  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14438701 taaaa-caagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 14438603  T
Q  222 actgaaaccacctatg 237  Q
    | ||||||||||||||    
T  14438602 attgaaaccacctatg 14438587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 758474 - 758265
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  758474 gttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 758375  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  758374 taaaa-caagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 758276  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  758275 actgaaaccac 758265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 23666229 - 23666020
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  23666229 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 23666130  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23666129 taaaa-caagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 23666031  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  23666030 actgaaaccac 23666020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 24038477 - 24038268
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  24038477 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 24038378  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24038377 taaaa-caagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 24038279  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  24038278 actgaaaccac 24038268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 49971530 - 49971316
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||| ||||| ||||||||||||||||    
T  49971530 gttactaggttgagtcacgaccaggtcgatctctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccagga 49971431  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49971430 taaaa-caagtccagctgcaactgtgcagttaactacttcactgtagaaaaccgttcgagaattacaccctcaaatatggtactgagaccactctttaat 49971332  T
Q  222 actgaaaccacctatg 237  Q
    ||||||||||| ||||    
T  49971331 actgaaaccacttatg 49971316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 7571324 - 7571115
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||| ||||||||||||||||    
T  7571324 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaatcacgccgcctccagga 7571225  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  7571224 taaaa-caagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaagaccacgctttaat 7571126  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  7571125 actgaaaccac 7571115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 29350227 - 29350428
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || || |||||||||||||||| ||| |||| |||||||||||||    
T  29350227 gttactaggttgagtcacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagaccatctaccatgccgcctccagga 29350326  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29350327 taaaa-caagctcaactacaactgtgtggttaattactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 29350425  T
Q  222 act 224  Q
    |||    
T  29350426 act 29350428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 18467212 - 18467420
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| || |||||||||||||||||||    
T  18467212 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccagga 18467311  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||| |||||| ||| ||| || |||||||||||||||||||||| ||||||||||||||||   |||||||||||||||||||||||||||||    
T  18467312 t-aaaacaagtccaactacaattgttcgattaactactgcactgtagaaaatcgttcgagaattacacttccaaatatggtactaagaccactctttaat 18467410  T
Q  222 actgaaacca 231  Q
    ||||||||||    
T  18467411 actgaaacca 18467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 55431302 - 55431513
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||  |||| ||| |||||||||||| ||||||||||||||||||||||    
T  55431302 gttattaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacactgtcaaaaattatgcaaggcagactatcaaccacgccgcctccagga 55431401  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| || |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||    
T  55431402 taaaa-caagtccagctacaactgtgcggttaactactgcactgtagaaaactgttcgagaattgcaccctcaaatatggtactaagaccactctttgat 55431500  T
Q  222 actgaaaccacct 234  Q
    ||| |||||||||    
T  55431501 acttaaaccacct 55431513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 3418982 - 3419190
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||||| ||| |||||    
T  3418982 gttactaggttgagtcacgaccaagtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccaccttcagga 3419081  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| |||||||||||||||||||||||| ||||  ||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||    
T  3419082 t-aaaacaagctcaactgcaactgtgcggttaactattgcatcgtagaaaaccgtttgagatttacaccctcaaatatggtactaagaccactc-ttaat 3419179  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  3419180 actgaaaccac 3419190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 3672573 - 3672781
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  3672573 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 3672672  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  3672673 t-aaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 3672770  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  3672771 tactgaaacca 3672781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 3692605 - 3692813
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  3692605 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 3692704  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  3692705 t-aaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 3692802  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  3692803 tactgaaacca 3692813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 20520041 - 20520250
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||| |||| ||||||||||||||||||| ||    
T  20520041 gttactaggttgagtcacgaccaggtcactctctttaagacgtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctccaaga 20520140  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||| ||| || ||||||||||||||||||||| |||||||||||| |||||||| ||||||| |||||||| |||||||||||||||||||||    
T  20520141 t-aaaacaagtccagctacaactgtgcggttaactactgtactgtagaaaactgttcgagatttacaccttcaaatatagtactaagaccactctttaat 20520239  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  20520240 actgaaaccac 20520250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 24 - 232
Target Start/End: Complemental strand, 39775832 - 39775625
Alignment:
Q  24 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||||||||||||||||     
T  39775832 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggat- 39775734  T
Q  124 aaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatac 223  Q
    ||||||||| || || ||||||| || |||||||||||||||||||||| ||||||| |||||||||  |||||||||||||||||| |||||||| |||    
T  39775733 aaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgaaaattacacctccaaatatggtactaagacaactctttactac 39775634  T
Q  224 tgaaaccac 232  Q
    |||||||||    
T  39775633 tgaaaccac 39775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 8069667 - 8069874
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||| ||||| ||||||||||||||||||||||    
T  8069667 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaa-attgtgcaagacagactatcaaccacgccgcctccagga 8069765  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||| || |||||    
T  8069766 taaaa-caagcccagctgcaactgtgcggttaactactgcactgtagataaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 8069863  T
Q  221 tactgaaacca 231  Q
     ||||||||||    
T  8069864 cactgaaacca 8069874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 8883157 - 8883365
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||| ||||||||||    
T  8883157 gttactaggtcgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgctgcctccagga 8883256  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccact-ctttaa 220  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| |  |||||    
T  8883257 t-aaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtacaaagaccaatattttaa 8883354  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  8883355 tactgaaacca 8883365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 18471995 - 18472203
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||| || ||| ||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  18471995 gttactaggttgagtcacgaccaggtcgctctctttacgatgtt-cgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagga 18472093  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || ||||||| || |||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  18472094 taaaa-caagcccagctacaactgttcgattaactactgcattgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 18472192  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  18472193 actgaaaccac 18472203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 65 - 232
Target Start/End: Complemental strand, 23661527 - 23661361
Alignment:
Q  65 ttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcact 164  Q
    ||||||||||| || || |||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  23661527 ttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaa-caagcccagctgcaactgtgcggttaactaatgcact 23661429  T
Q  165 gtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23661428 gtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 23661361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 3033631 - 3033839
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||| ||||||| ||||    
T  3033631 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacaccgcctcaagga 3033730  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| || || ||||||| || |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| || || |||||    
T  3033731 t-aaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagatcaatcttttaa 3033828  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  3033829 tactgaaacca 3033839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 8887917 - 8888125
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||  | || |||||||||| ||||  ||||||||||||||||||||||    
T  8887917 gttactaggttgagtcacgaccaggtcgctctctttaagacgttttgttgcactgtccaaaattgtgcaagacagattatcaaccacgccgcctccagga 8888016  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  8888017 t-aaaacaaatccagctgcaactgtgcggttaactactacactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 8888114  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  8888115 tactgaaacca 8888125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 27708959 - 27709136
Alignment:
Q  58 aagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaacta 157  Q
    |||||||||| ||||||| || || ||| ||||||| |||| ||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  27708959 aagacgtttcatggcactgcccaaaattatgcaaggtagactatcaaccacgccgcctccaggataaaa-caagcccagcttcaactgtgcggttaacta 27709057  T
Q  158 ctgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccacctat 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  27709058 ctgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagatcactcttcaatactgaaaccacctat 27709136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 32474784 - 32474576
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||| |||||||||||||||||||  |||||||||||||||||| || || |||||||||| ||||| ||||||||||||| ||||||||    
T  32474784 gttactagattgagccacgaccaggtcgctctct--aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgtctccagga 32474687  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtact-aagaccactctttaa 220  Q
    ||||| |||||||| || ||||||| || |||||||||||||||||||||| ||||||||||||| |||   |||||||||||| |||||||||||||||    
T  32474686 taaaa-caagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattatacctctaaatatggtactaaagaccactctttaa 32474588  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  32474587 tactgaaaccac 32474576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 3657346 - 3657137
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||| ||||||||||||  || |||||||||||||||||||||||||||||    || |||||||||| ||||| |||||||| ||| |||||| ||    
T  3657346 gttactatgttgagtcacgattagatcgctctctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccatgccacctccaaga 3657247  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| || |||||||  | |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3657246 taaaa-caagtccagctacaactgttagattaactactgcactgtagaaaatcgttcgagaattacacccttaaatatggtactaagaccactctttaat 3657148  T
Q  222 actgaaaccac 232  Q
     ||||||||||    
T  3657147 gctgaaaccac 3657137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12965979 - 12965770
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||  ||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  12965979 gttactagattgagtcacaaccaggtcgctctctttaagacgttttatggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 12965880  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| |||||| ||| ||| || ||||||| ||||||||||||||| |||| ||||||||| |||| |||||||||| ||||||| || |||||    
T  12965879 t-aaaacaagtccaactacaattgttcgattaactaatgcactgtagaaaactgttcaagaattaca-cctccaatatggtaccaagaccattcttttaa 12965782  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  12965781 tactgaaaccac 12965770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12971739 - 12971530
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||| | || || |||||||||| ||||  ||||| ||||||||||| ||||    
T  12971739 gttactaggttgactcacgaccaggtctctctctttaagacgtttcgtggcattgcccaaaattgtgcaagacagattatcaatcacgccgcctctagga 12971640  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||||||||| ||||||| |  |||||||||||| ||||||||||||||||||||||||| |||| |||||||||| ||||| | || |||||    
T  12971639 t-aaaacaagcccaactacaactgttcaattaactactgcattgtagaaaaccgttcgagaattaca-cctccaatatggtaccaagactaatcttttaa 12971542  T
Q  221 tactgaaaccac 232  Q
    |||| |||||||    
T  12971541 tactaaaaccac 12971530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 24 - 228
Target Start/End: Complemental strand, 25726897 - 25726690
Alignment:
Q  24 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaa---ggcagacaatcaaccacgccgcctccagg 120  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||   |||   ||| ||||||||||||||| |||    
T  25726897 tactagattgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccagaattgtgcaatcaggctatcaaccaaccacgccgcctctagg 25726798  T
Q  121 ataa-aaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttta 219  Q
    |  | |||||||  ||  | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |    
T  25726797 aggataaacaagtgcagttacaactgtgcggttaactactgcactgtagaaaaccgttcgagatttaca-cctccaatatggtactaagaccactcttaa 25726699  T
Q  220 atactgaaa 228  Q
    |||||||||    
T  25726698 atactgaaa 25726690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 2207754 - 2207646
Alignment:
Q  124 aaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatac 223  Q
    |||||||||||| || ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2207754 aaaacaagcccatctacaattgtgcggttaactactgtactgtagaaaacccttcgagaattacaccctcaaatatggtactaagaccactctttaatac 2207655  T
Q  224 tgaaaccac 232  Q
    |||||||||    
T  2207654 tgaaaccac 2207646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12112747 - 12112538
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  | ||  ||||||||| ||||| ||||||||| ||||||||||||    
T  12112747 gttactaggttgaatcacgactaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaagacagactatcaaccacaccgcctccagga 12112648  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| ||||| ||| || | |||||||| || |||||||||||||| ||||||| ||||| |||| |||||||| | ||||| | || |||||    
T  12112647 t-aaaacaagctcaactacaaatgggtggttaactgctacactgtagaaaaccattcgagatttaca-cctccaatatggtgcaaagactattcttttaa 12112550  T
Q  221 tactgaaaccac 232  Q
    |||| |||||||    
T  12112549 tacttaaaccac 12112538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 46964031 - 46964211
Alignment:
Q  51 tctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcgg 150  Q
    ||||||||||||||||| |||||||    || ||||||||| |||||| |||| ||| ||| |||| ||||||||| ||| | ||  | ||||| || ||    
T  46964031 tctctttaagacgtttcatggcactgtttaaaattgtgcaatgcagactatcacccatgccacctctaggataaaa-caaactcagatacaactatgtgg 46964129  T
Q  151 ttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46964130 ttaactattgcactatagaaaaccgttcgagatttacaccctcaaatatggtattaagaccactctttaatactgaaaccac 46964211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 55325847 - 55325972
Alignment:
Q  106 cacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaacc-gttcgagaattacaccctcaaatatggtac 204  Q
    ||||||||||||||||||||| ||||||||  | |||||||||||||||||| |||||||||||||||| | |||||||||||||||| ||||| |||||    
T  55325847 cacgccgcctccaggataaaa-caagcccagttacaactgtgcggttaacta-tgcactgtagaaaacccgatcgagaattacacccttaaatacggtac 55325944  T
Q  205 taagaccactctttaatactgaaaccac 232  Q
    ||||||||||||||||||||||||||||    
T  55325945 taagaccactctttaatactgaaaccac 55325972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 6596385 - 6596255
Alignment:
Q  100 atcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatat 199  Q
    ||||||||||||||||||||||||||| ||||| || || ||| | || |||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  6596385 atcaaccacgccgcctccaggataaaa-caagctcagctacaattatgtggttaactactgcattgtagaaaaccgttcgagaattacaccttc-aatat 6596288  T
Q  200 ggtactaagaccactc-tttaatactgaaacca 231  Q
    |||||||||||||||| ||||||||||||||||    
T  6596287 ggtactaagaccactcttttaatactgaaacca 6596255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 29715631 - 29715774
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||  | || ||||||| ||| |||| ||||||||||||||||| ||||    
T  29715631 gttattaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgtccaaaattgtgctaggaagactatcaaccacgccgcctctagga 29715730  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgt 166  Q
    | |||||||| ||| || || ||||||||||||||| ||||||||    
T  29715731 t-aaaacaagtccagctacagctgtgcggttaactattgcactgt 29715774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 28125104 - 28125242
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |  || |||||||||| ||||| || |||||| | ||||||||||    
T  28125104 gttactaggttgagtcacgaccaggttgctct-tttaagacatttcgtggcactgcttaaaattgtgcaagacagactattaaccacactgcctccagga 28125202  T
Q  122 -taaaaacaagcccaactgcaactgtgcggttaactactg 160  Q
     ||||||||||  ||||| ||| |||||||| ||||||||    
T  28125203 ttaaaaacaagttcaactacaattgtgcggtcaactactg 28125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 26962050 - 26962152
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || |  |||||||||| |||| | ||| ||||||| |||||||||    
T  26962050 ttactgggttgagtcacgaccagatcgctctctttaagacgtttcgtggcacta-cacaagttgtgcaaggtagactaacaaacacgccgtctccaggat 26962148  T
Q  123 aaaa 126  Q
    ||||    
T  26962149 aaaa 26962152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 20090757 - 20090664
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  20090757 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 20090664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 20095882 - 20095789
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  20095882 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 20095789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 34129264 - 34129171
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  34129264 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 34129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 13022024 - 13022120
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  13022024 ggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 13022120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 33089441 - 33089345
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  |  |||||||||| |||| | ||||||||||| ||| |||||||||    
T  33089441 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccta-gttgtgcaaggtagactaacaaccacgccgtctctaggataaaa 33089345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 15768295 - 15768193
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||  | | ||||||||| |||| | ||||| ||||| |||||||||    
T  15768295 ttactgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-actgtgcaaggtagactagcaaccgcgccgtctccaggat 15768197  T
Q  123 aaaa 126  Q
    ||||    
T  15768196 aaaa 15768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 17364063 - 17364158
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc-aaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||||  ||||||||| |||| | ||||| ||||| |||||||||||||    
T  17364063 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 17364158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 3477041 - 3476948
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  3477041 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 3476948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 15763125 - 15763032
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | | ||||||||| |||| | ||||| ||||| |||||||||||||    
T  15763125 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-actgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 15763032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 17368719 - 17368812
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  17368719 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 17368812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 20810369 - 20810465
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||  |  |||||||||| |||| | ||||||||||| |||||||||||||    
T  20810369 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcactacccta-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 20810465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 27708865 - 27708918
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 75  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27708865 gttactaggttgagtcacgaccaggtcgttctctttaagacgtttcgtggcact 27708918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 53119524 - 53119620
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||  ||  |||||||||| |||| | ||||||||||| ||| |||||||||    
T  53119524 ggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactactcaa-gttgtgcaaggtagactaacaaccacgccgtctctaggataaaa 53119620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 17357836 - 17357931
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc-aaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||| ||||  ||||||||| |||| | ||||| ||||| |||||||||||||    
T  17357836 tgagtcacgaccaggtcgatttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 17357931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 3482518 - 3482425
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |||| ||| |||||||||| |||| | ||||| ||||| |||||||||||||    
T  3482518 tgagtcacgaccaggtcgctttctttaagacttttcgcggcattacctaat-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 3482425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 54270644 - 54270737
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  54270644 tgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 54270737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 2617355 - 2617258
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||| |||| |||||| |||||||||||||||| ||||||||   |  |||||||||| |||| | ||||| |||||||||||||||||||    
T  2617355 ggttgagtcacaaccatgtcgctttctttaagacgtttcgcggcactactcgagtttgtgcaaggtagactaacaaccgcgccgcctccaggataaaa 2617258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 38437089 - 38436993
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||| | ||  ||||| |||| |||| | ||||||||||| |||||||||||||    
T  38437089 ggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatccaa-gttgtgaaaggtagactaacaaccacgccgtctccaggataaaa 38436993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 10586281 - 10586082
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaac 128  Q
    ||||||||||||||||||||||| ||||||||||   ||  |||||||||  | ||||||||||| |||| | |||||  |  |||||||||||||||      
T  10586281 ggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtgt-gcctccaggataaaac- 10586184  T
Q  129 aagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaa 227  Q
     ||||||  | || |||| || | || |||||||| ||| |  | |||||||||| || ||||||| |||||||||||||||||| ||||||||||||||    
T  10586183 -agcccagtt-cacctgttcgatcaaatactgcaccgtatatgatcgttcgagaaataacaccctctaatatggtactaagaccattctttaatactgaa 10586086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 27605240 - 27605137
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||  ||||||||  |  |||||||||| |||| | |||| || ||||||| |||||    
T  27605240 ttaccaggttgagtcacgaccaagtcgctctctttaagacatttcgcagcactacccgagtttgtgcaaggtagactaacaactacaccgcctctaggat 27605141  T
Q  123 aaaa 126  Q
    ||||    
T  27605140 aaaa 27605137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 55128790 - 55128883
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||| ||  ||||| |||| |||| | ||||| ||||| |||||||||||||    
T  55128790 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaa-gttgtgtaaggtagactagcaaccgcgccgtctccaggataaaa 55128883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 16013724 - 16013801
Alignment:
Q  50 ctctctttaagacgtttcgtggcactacc-aaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||| ||||| | ||| ||||||||||  |||| ||| |||||||||||||||||||||||    
T  16013724 ctctctttaagacgtttcgtgacactatctaaaaattgtgcaagatagactatccaccacgccgcctccaggataaaa 16013801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 201
Target Start/End: Original strand, 20507663 - 20507818
Alignment:
Q  42 ccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgca 141  Q
    ||||||| |||||||||   ||||| |||||||| |  || |||||||||||||||| ||||||||| || |||| ||||| |||||||| |||||   |    
T  20507663 ccaggtcactctcttta---cgtttggtggcactgctcaaaattgtgcaaggcagactatcaaccacaccacctctaggat-aaaacaagaccaacaata 20507758  T
Q  142 actgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
      |||||| |||||||||||||| |||  ||||| | |||| |||||||| |||||||||    
T  20507759 gttgtgcgattaactactgcactctagccaaccggttgagacttacacccgcaaatatgg 20507818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 2207810 - 2207759
Alignment:
Q  25 actaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcacta 76  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  2207810 actagattgagtcacgaccaggtcgctctttttaagacgtttagtggcacta 2207759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 4117704 - 4117602
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    ||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||| ||  |||||||||| |||| | ||||| ||| | |||||||||    
T  4117704 ttactggggtgagtcacgaccaggtcgctttcgttaagacatttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgctgtctccaggat 4117606  T
Q  123 aaaa 126  Q
    ||||    
T  4117605 aaaa 4117602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 10321444 - 10321538
Alignment:
Q  34 agtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaaca 129  Q
    |||||||||||||||||| |||||||||||||||| ||||||||  || ||||||||||| |||| | ||||| ||  | |||||| |||||||||    
T  10321444 agtcacgaccaggtcgctttctttaagacgtttcgcggcactacttaa-attgtgcaaggtagactagcaaccgcgttgtctccagaataaaaaca 10321538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 30341939 - 30341846
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||| || |||||| |||| |||| | ||||| | ||  |||||||||||||    
T  30341939 tgagtcacgaccaggtcactttctttaagacgtttcgcggcactacctaa-attgtgtaaggtagactagcaaccgcaccatctccaggataaaa 30341846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 7806656 - 7806556
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||| |||||||||  ||||||||||||||||||||||||| |||  | ||||||| || |||||   ||| |||| ||||||||||| ||||| |||||    
T  7806656 ttaccaggttgagttgcgaccaggtcgctctctttaagacgattcacgacactacctaaaattgt---aggtagactatcaaccacgctgcctcgaggat 7806560  T
Q  123 aaaa 126  Q
    ||||    
T  7806559 aaaa 7806556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 21494399 - 21494304
Alignment:
Q  31 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||| || ||  | || |||| ||  |||||||||| |||| | ||||| ||||| |||| ||||||||    
T  21494399 ttgagtcacgaccaggtcgctctctttaagatgtatcacgacagtacccaagtttgtgcaaggtagactaacaaccgcgccgtctccgggataaaa 21494304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 28125251 - 28125323
Alignment:
Q  144 tgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttt 218  Q
    |||||||| |||||||| |||||||||||| ||||||| |||||| |||| ||||||||| |||||| |||||||    
T  28125251 tgtgcggtcaactactg-actgtagaaaacagttcgagtattaca-cctccaatatggtattaagacaactcttt 28125323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 1688980 - 1688936
Alignment:
Q  34 agtcacgaccaggtcgctctctttaagacgtttcgtggcactacc 78  Q
    |||||||||||||||||| |||||||||||||| | |||||||||    
T  1688980 agtcacgaccaggtcgctttctttaagacgttttgcggcactacc 1688936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 48432398 - 48432501
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| |||||| || || ||||||||||||||||||||||| |||||||| || || |||||| ||  ||||| |||||||||| || | ||| ||    
T  48432398 ttactaggctgagtcgcggactaggtcgctctctttaagacgttttgtggcactgcccaaaattgtg-aaaacagactatcaaccacgacgtccccaaga 48432496  T
Q  122 taaaa 126  Q
    |||||    
T  48432497 taaaa 48432501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 48435933 - 48435830
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| ||||    || || |||||| |||||| |||||||||| || | ||||||    
T  48435933 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgacactgttcaaaatagtgcaa-gcagactatcaaccacgacgtccccagga 48435835  T
Q  122 taaaa 126  Q
    |||||    
T  48435834 taaaa 48435830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 6024110 - 6024165
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc 78  Q
    ||||| |||||| ||| ||||||||| |||| |||||||||||||| |||||||||    
T  6024110 ttactgggttgattcatgaccaggtctctctttttaagacgtttcgcggcactacc 6024165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 31002834 - 31002892
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || ||||||| |||||| ||||||||||||||||||| || |||||||    
T  31002834 cgttcgagaaataacaccctctaatatgttactaagaccactctttaacaccgaaacca 31002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 53358239 - 53358277
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttc 67  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  53358239 ggttgagtcacggccaggtcgctttctttaagacgtttc 53358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 6596430 - 6596401
Alignment:
Q  20 cagttactaggttgagtcacgaccaggtcg 49  Q
    ||||||||||||||||||||||||||||||    
T  6596430 cagttactaggttgagtcacgaccaggtcg 6596401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 23661556 - 23661527
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgct 51  Q
    ||||||||||||||||||||||||||||||    
T  23661556 gttactaggttgagtcacgaccaggtcgct 23661527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 47567172 - 47567093
Alignment:
Q  152 taactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccact-ctttaatactgaaacca 231  Q
    |||||| |||||||||||||| | |||||||||||||  ||| |||||| |||||||| ||||  |||||||| |||||||    
T  47567172 taactattgcactgtagaaaatccttcgagaattaca-tctccaatatgatactaagagcactattttaataccgaaacca 47567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 37259983 - 37259774
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||||| ||||||||||||||||||||||    
T  37259983 gttactaggttgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccagga 37259884  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37259883 taaaa-caagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 37259785  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  37259784 actgaaaccac 37259774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 31273510 - 31273719
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  31273510 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 31273609  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31273610 taaaa-caagcccagctacaactgtgtggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 31273708  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  31273709 actgaaaccac 31273719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 37264670 - 37264461
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |||||||||||| ||||||||||||||||||||||    
T  37264670 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccagga 37264571  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37264570 taaaa-caagcccagctacaattgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 37264472  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  37264471 actgaaaccac 37264461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 34 - 237
Target Start/End: Complemental strand, 31729481 - 31729279
Alignment:
Q  34 agtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcc 133  Q
    ||||| || |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||| |||| |    
T  31729481 agtcatgatcaggtcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataaaa-caagtc 31729383  T
Q  134 caactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccacc 233  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31729382 cagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccacc 31729283  T
Q  234 tatg 237  Q
    ||||    
T  31729282 tatg 31729279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 31269023 - 31269232
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  31269023 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagga 31269122  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||| ||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31269123 t-aaaacaagtccagctacaaccgtgtggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 31269221  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  31269222 actgaaaccac 31269232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 16421018 - 16421227
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| || || |||||||||||||||| |||||||||||||||| |||||    
T  16421018 gttactaggttgagtcacgaccaggtcgctctcattaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctacagga 16421117  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||||||||||    
T  16421118 taaaa-caagcccagctacaactgtgcggttaactactgcactgtagaaaaccgtccgagatttacaccttcgaatatggtactaagaccactctttaat 16421216  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  16421217 attgaaaccac 16421227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 19101966 - 19102174
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||  || |||||||||  ||||| |||||||||| |||||||||||    
T  19101966 gttactaggttaagtcacgacgaggtcactctgtttaagacgtttcgtggcactactcaaaattgtgcaaaacagactatcaaccacgtcgcctccagga 19102065  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19102066 taaaa-caagtccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 19102164  T
Q  222 actgaaacca 231  Q
    ||| ||||||    
T  19102165 actaaaacca 19102174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 5271525 - 5271311
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  5271525 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 5271426  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||| |||||| |||||||  | || |||| |||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||    
T  5271425 t-aaaacaagtccaactacaactgtttgattcactattgcactgtagaaaatcgttcgagaattacacctccaaatatggtgctaagaccactctttaat 5271327  T
Q  222 actgaaaccacctatg 237  Q
    ||||||||||||||||    
T  5271326 actgaaaccacctatg 5271311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 8693700 - 8693909
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| || || ||||||||||||||||| ||||    
T  8693700 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcgctacccaaaattgtgcaagacatactatcaaccacgccgcctcaagga 8693799  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| || || ||||||| || |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  8693800 t-aaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 8693898  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  8693899 actgaaaccac 8693909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 55251709 - 55251917
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  | || |||||||||| ||||| |||||||||||| |||||||||    
T  55251709 gttactaggttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccagga 55251807  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||||    
T  55251808 taaaa-caagcccaactacaactgtacggttaactactgcactgtagaaaaccgttcgagatttacacctttgaatatggtactaagaccactctttaat 55251906  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  55251907 actgaaaccac 55251917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 51697906 - 51698111
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| || |||| |  || |||||||||||||||| ||||||||||||||||||||||    
T  51697906 gttactaggttgagtcacgaccagatcgctctttttaagacgtttcatgacactgctcaaaattgtgcaaggcagactatcaaccacgccgcctccagga 51698005  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51698006 t-aaaacaagctcaactacaattgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagatcactctttaat 51698103  T
Q  222 actgaaac 229  Q
    | ||||||    
T  51698104 attgaaac 51698111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 5928325 - 5928116
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||||||| |  || |||||||||||||||| ||||||||| ||||||||||||    
T  5928325 gttaccaggttgagtcacgaccaggtcgctctctttaagatgtttagtggcactgctcaaaattgtgcaaggcagactatcaaccacaccgcctccagga 5928226  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| |||||||||| || |||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||    
T  5928225 taaaa-caagcccagctgcaactgttcgattaactactgcactgtagaaaatcgttcaagaattacacctccaaatatggtactaagaccactctttaat 5928127  T
Q  222 actgaaaccac 232  Q
    ||| |||||||    
T  5928126 acttaaaccac 5928116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 47244237 - 47244446
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||    || ||| |  |||  |||| ||||||||||||||||||||||    
T  47244237 gttagtaggttgagtcacgatcaggtcgccctctttaagacgtttcgtggcactgttcaaaattattgaagaaagactatcaaccacgccgcctccagga 47244336  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  47244337 taaaa-caagcacaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaaacccccaaatatggtactaagaccactctttaat 47244435  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  47244436 actgaaaccac 47244446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 13522098 - 13521887
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  13522098 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 13521999  T
Q  122 taaaaacaagccca---actgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tt 217  Q
    | |||||||| |||    |||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||| ||    
T  13521998 t-aaaacaagtccagctgctgcaactgtacggttgactactgcactgtagaaaaccgttcgagaattaca-cttttaatatggtactaagaccactcttt 13521901  T
Q  218 taatactgaaacca 231  Q
    ||||||||||||||    
T  13521900 taatactgaaacca 13521887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 232
Target Start/End: Original strand, 13059400 - 13059607
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |  || |||||||||| ||||| ||||||||| ||||||| || ||    
T  13059400 ttactaggttgagtcatgaccagatcgctctctttaagacgtttcgtggcactgcataaaattgtgcaagacagactatcaaccactccgcctctagaat 13059499  T
Q  123 aaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaata 222  Q
     ||||||||| || || |||||||| |||||||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  13059500 -aaaacaagctcagctacaactgtgtggttaactactgcattgtagaaaaccgttcgag-attacaccttcaaatatggttctaagaccactctttaata 13059597  T
Q  223 ctgaaaccac 232  Q
     |||||||||    
T  13059598 ttgaaaccac 13059607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12824001 - 12823798
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||||| || || |||||||||| || || ||||||||||||||||||||||    
T  12824001 gttattaggttgagtcatgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacgccgcctccagga 12823902  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    |||||       ||| | || || ||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||    
T  12823901 taaaa-------caagtccatctatgcggctaactactgcactgtagaaaaccgttcgagatttacaccttcgaatatggtactaagaccactctttaat 12823809  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  12823808 actgaaaccac 12823798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 33463462 - 33463253
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||||||||||   |||||| ||||||||||||||    
T  33463462 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaaggcagattgtcaaccccgccgcctccagga 33463363  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| ||||| ||||||| || |||||||||||| ||||||||||||||||||||||||||| || |||||||||| || |||| || |||||    
T  33463362 t-aaaacaagcacaactacaactgttcgattaactactgcattgtagaaaaccgttcgagaattacaccttc-aatatggtaccaaaaccattcttttaa 33463265  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  33463264 tactgaaaccac 33463253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 201
Target Start/End: Complemental strand, 42758861 - 42758683
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||||| ||||| |||||||||| ||||||||| |    
T  42758861 gttactaggttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcgcctccagaa 42758762  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
    | ||||| || ||||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42758761 t-aaaactagtccaaaaacaactgtgcgattaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 42758683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 19106608 - 19106805
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||| | ||| ||||| ||||||||||||||| | ||||| || || |||||||||||| ||| |||||||||| ||||||||| |    
T  19106608 gttactaggttgagtcacaagcagatcgctttctttaagacgtttcatagcactgcccaaaattgtgcaaggctgactatcaaccacgtcgcctccagaa 19106707  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    |||||       ||||     || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  19106708 taaaa-------caac-----ctttgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtattaagatcactctttaat 19106795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 19541267 - 19541058
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| ||| ||| ||| |||||||  |||||||||| |    || ||||| |||| ||||| ||||||||||||||||  ||||    
T  19541267 gttactaggttgagtcacgatcagatcgttctttttaagatatttcgtggcattgtttaaaattgtacaagacagactatcaaccacgccgcctatagga 19541168  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| || |||| || || |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  19541167 taaaa-caagtccagctacaacagttcgattaactactgcattgtagaaaaccgttcgagaattacacctccaaatatggtactaagaccactctttaat 19541069  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  19541068 attgaaaccac 19541058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 8030582 - 8030374
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||| |||| | |||||||||||||||||||||||| |||||||| || || ||||||||||  |||| |||||| |||| ||||||||||    
T  8030582 gttactaggttgaatcacaatcaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagatagactatcaacaacgctgcctccagga 8030483  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||||||| || ||| ||| || |||||||||||||||||||||||||||||| ||||||| |||| |||||| ||| |||| || || |||||    
T  8030482 t-aaaacaagcccagctacaaatgttcgattaactactgcactgtagaaaaccgttcgaaaattaca-cctccaatatgataccaagatcattcttttaa 8030385  T
Q  221 tactgaaacca 231  Q
    |||| ||||||    
T  8030384 tactaaaacca 8030374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 12878228 - 12878421
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||    || ||||||||| |||||| ||||| |||||| ||||||| |    
T  12878228 gttactaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacacttttcaaaattgtgcaaagcagactatcaatcacgccacctccagaa 12878327  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttt 218  Q
    | ||||||||  || || ||||||||  ||||| |||||||| |||||||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  12878328 t-aaaacaagttcagctacaactgtgttgttaattactgcac-gtagaaaaccgttcgagaattaca-cctccaatatgatactaagaccactcttt 12878421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 33469079 - 33468870
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| |||||||| || ||  |||||||||||||||  ||||||||||| |||||| ||    
T  33469079 gttactaggttgagtcacgactaggtcgttctctttaagacgttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacctccatga 33468980  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| || || ||| ||| || |||||||||||||||| ||| |  ||| |||||||||| |||| |||||||||| ||||||| || |||||    
T  33468979 t-aaaacaagctcagctacaattgttcgattaactactgcactgttgaataaggtttgagaattaca-cctccaatatggtaccaagaccattcttttaa 33468882  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  33468881 tactgaaaccac 33468870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 47574614 - 47574817
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||| || ||||||| || |||||||||| || |  ||||| |||||||| |||||||    
T  47574614 gttattaggttgagtcacaatcaggtcgctctctttaagacgtttcttgacactacccaaaattgtgcaagacaaaatatcaatcacgccgcatccagga 47574713  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| ||| || ||||||||||||||||||||||  |||||||||| |||||||||||||||| |||      |||||||||| |||| |||||    
T  47574714 t-aaaacaagtccagctacaactgtgcggttaactactgccatgtagaaaactgttcgagaattacaccttca------gtactaagacaactcttttaa 47574806  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  47574807 tactgaaacca 47574817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 232
Target Start/End: Complemental strand, 48276749 - 48276546
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||||||||||| |||||| |||||||||||||||||||||||| || |||||    || |||||||||     || |||||||||||||||||||||||    
T  48276749 ttactaggttgaatcacgatcaggtcgctctctttaagacgttttgttgcactgttcaaaattgtgcaa-----actatcaaccacgccgcctccaggat 48276655  T
Q  123 aaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaat 221  Q
    |||| ||||  || || ||||||| || |||||||||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||| || ||||||    
T  48276654 aaaa-caagttcagctacaactgttcgattaactactgcactgtagaaaaccattcgagaattaca-cctccaatatggtaccaagaccattcttttaat 48276557  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  48276556 actgaaaccac 48276546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 32082196 - 32082017
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| || |||| |||||||| |||| |||||||  | || ||||||||||||| || ||||||||||||||||||||||    
T  32082196 gttactaggttgagtcacgaccagatcactctttttaagacatttcatggcactgtccaaaattgtgcaaggca-actatcaaccacgccgcctccagga 32082098  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggta 203  Q
    | ||||||||| ||  | ||| ||||||||||||||||||| ||||||||||| ||||||| ||||||| ||  ||||||||    
T  32082097 t-aaaacaagctcagttacaattgtgcggttaactactgcagtgtagaaaaccattcgagatttacaccttcggatatggta 32082017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 31765875 - 31765979
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  31765875 gttactaggttgagtcacaaccaggtcactctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 31765974  T
Q  122 taaaa 126  Q
    |||||    
T  31765975 taaaa 31765979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 228
Target Start/End: Original strand, 12874528 - 12874733
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||| | ||| ||||||||||||||||  |||||||||||  | || ||||||||| |||||| ||||| ||||||||||||||||    
T  12874528 gttattaggttgagtcacaatcagatcgctctctttaagacaattcgtggcactgtctaaaattgtgcaaagcagaccatcaatcacgccgcctccagga 12874627  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| || ||  || |||||||||||||||| |||||||||||||||||   |||||||| | || ||||||||| ||||||||| | |||||    
T  12874628 t-aaaacaagctcagctaaaattgtgcggttaactactacactgtagaaaaccgttaatgaattaca-cttccaatatggtagtaagaccacccttttaa 12874725  T
Q  221 tactgaaa 228  Q
    ||||||||    
T  12874726 tactgaaa 12874733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 232
Target Start/End: Original strand, 19906245 - 19906448
Alignment:
Q  27 taggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||| ||||||||||| |||||||||||  ||| ||||  | || |||||||||| ||||| ||||||  ||||||||||||||| |||    
T  19906245 taggttgagtcacgatcaggtcgctctttttaagacgttcagtgacactgtctaaaattgtgcaagacagactatcaactccgccgcctccaggat-aaa 19906343  T
Q  127 acaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactg 225  Q
    |||||| ||||| |||||||   | |||||||||| || ||||||||||||||| ||||||| |||| |||||||||| ||||||| || |||||||||     
T  19906344 acaagctcaactacaactgt-ttgataactactgcgctttagaaaaccgttcgaaaattaca-cctccaatatggtaccaagaccattcttttaatactt 19906441  T
Q  226 aaaccac 232  Q
    |||||||    
T  19906442 aaaccac 19906448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 4551048 - 4551180
Alignment:
Q  84 ttgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaa 183  Q
    ||||||||| ||||| |||||| |||||||||||||||||||| ||| | ||| | ||||| |||| |||||||||||||||||||||||||||  |||     
T  4551048 ttgtgcaagacagactatcaactacgccgcctccaggataaaa-caaactcaattacaactctgcgattaactactgcactgtagaaaaccgtttaagat 4551146  T
Q  184 ttacaccctcaaatatggtactaagaccactctt 217  Q
    ||||||| ||||||||||||||||||||| ||||    
T  4551147 ttacaccatcaaatatggtactaagaccattctt 4551180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 8649643 - 8649528
Alignment:
Q  115 tccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccact 214  Q
    |||||||||||| |||||| |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||| ||||||    
T  8649643 tccaggataaaa-caagcctaactacaactgtgcggttaactactacactgtagaaaactgttcgagaattacaccttc-aatatggtactaacaccact 8649546  T
Q  215 c-tttaatactgaaacca 231  Q
    | ||||||||||||||||    
T  8649545 cttttaatactgaaacca 8649528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 8661450 - 8661335
Alignment:
Q  115 tccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccact 214  Q
    |||||||||||| |||||| |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||||||| ||||||    
T  8661450 tccaggataaaa-caagcctaactacaactgtgcggttaactactacactgtagaaaactgttcgagaattacaccttc-aatatggtactaacaccact 8661353  T
Q  215 c-tttaatactgaaacca 231  Q
    | ||||||||||||||||    
T  8661352 cttttaatactgaaacca 8661335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 2819833 - 2820024
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||||||||||||||||| | ||||||||| ||||||||| |||  | || ||||||||||| |||| ||| |||| ||||| |||||||    
T  2819833 gttactagattgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattgtgcaaggtagactatctaccatgccgcgtccagga 2819932  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccact 214  Q
    ||||| ||||   | || ||||| |||  ||||||  |||||| ||||||| ||||||||| |||||||||||||||||  ||||||||||||    
T  2819933 taaaa-caagtttagctacaactatgcaattaactgttgcactatagaaaatcgttcgagatttacaccctcaaatatgacactaagaccact 2820024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 653043 - 653136
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||| | ||||||||||| |||||||||||||    
T  653043 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaat-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 653136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 10120913 - 10120811
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||    
T  10120913 ttaccaggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggat 10120815  T
Q  123 aaaa 126  Q
    ||||    
T  10120814 aaaa 10120811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 51696991 - 51697072
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatca 103  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || || |||||||||||||||| ||||    
T  51696991 gttactaggttgagtcacgaccaggtcgctctccttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatca 51697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 36354176 - 36354269
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  36354176 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 36354269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 36359294 - 36359387
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  36359294 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 36359387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 39999069 - 39999162
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  39999069 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 39999162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 40004027 - 40004120
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  40004027 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 40004120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 53797629 - 53797722
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  53797629 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 53797722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 54348357 - 54348450
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  54348357 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 54348450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 13065874 - 13065778
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctcca 118  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||| || ||  ||||| |||| |||| ||||||||||| |||||||    
T  13065874 gttactaggttgagtcacgactatgtcgctctctttaagacgtttcatggcactgcccaaagttgtgaaagggagactatcaaccacgcagcctcca 13065778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 8980380 - 8980287
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  8980380 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 8980287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 8985500 - 8985407
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  8985500 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 8985407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 13700510 - 13700603
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  13700510 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 13700603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 21299928 - 21299835
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  21299928 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 21299835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 32545083 - 32545293
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc-aaatattgtg-caaggcagacaatcaaccacgccgcctccag 119  Q
    |||||||||||||||||||| ||||||  ||| ||||||| ||||||||||||  || ||| |||||| |||| ||||| ||||||||||  |  ||||     
T  32545083 gttactaggttgagtcacgatcaggtcaatct-tttaagatgtttcgtggcaccgcctaaaaattgtgtcaagacagactatcaaccacgttgtatccat 32545181  T
Q  120 gataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagac--cactctt 217  Q
    ||||||| ||||| ||||| ||| ||||||  ||||||||||||||||   || |||||||||||||||  ||| |||||| |||||||||  | || ||    
T  32545182 gataaaa-caagctcaactacaattgtgcgactaactactgcactgtaattaatcgttcgagaattaca-actccaatatgttactaagactgctctatt 32545279  T
Q  218 taatactgaaacca 231  Q
    ||||||||||||||    
T  32545280 taatactgaaacca 32545293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 41393245 - 41393338
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  41393245 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 41393338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 51019468 - 51019375
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  51019468 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 51019375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 54343203 - 54343296
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| || ||||||||||    
T  54343203 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccga-attgtgcaaggtagactagcaaccgcgccgtctacaggataaaa 54343296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 54991486 - 54991579
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  54991486 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 54991579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 13065776 - 13065713
Alignment:
Q  169 aaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  13065776 aaaaccattcgagatttacaccctcaaatatggtactaaaaccactctttaataccgaaaccac 13065713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 16953107 - 16953178
Alignment:
Q  55 tttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||| |||||| || |||||||||||||||| |||||||||  ||||||||||||||||    
T  16953107 tttaagacgtttcgtggtactacccaaaattgtgcaaggcagactatcaaccacaacgcctccaggataaaa 16953178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 13695159 - 13695252
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  13695159 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 13695252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 21305048 - 21304955
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  21305048 tgagtcacgaccaggtcgctttctttaagacttttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 21304955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 47046402 - 47046309
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  47046402 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 47046309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 24490028 - 24490125
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||   ||  |||||||||| |||| | ||||| |||| ||||||||||||||    
T  24490028 ggttgagtcacgaccagatcgctctctttaagacgtttcgcgacactaatcaagtttgtgcaaggtagactaacaaccgcgccacctccaggataaaa 24490125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 40408196 - 40408395
Alignment:
Q  31 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatc-aaccacgccgcctccaggataaaaaca 129  Q
    |||||| ||||||||||| ||||||||||||||||| || ||||| |  ||  |||||||||  |||  ||| || ||| |||| |  ||||||||| ||    
T  40408196 ttgagttacgaccaggtcactctctttaagacgttttgtagcactgcttaaagttgtgcaagatagattatccaatcacaccgcttttaggataaaa-ca 40408294  T
Q  130 agcccaactgcaactgtgcggttaactactgcactgtagaaaaccgt--tcgagaattacaccctcaaatatggtactaagaccactctttaatactgaa 227  Q
    ||  ||||| ||| |||| |||||| ||||| |||||||||||||||  || ||| |||||  || ||||||||||||||||||||| ||||||| ||||    
T  40408295 agttcaactacaattgtgtggttaattactgtactgtagaaaaccgttctcaagatttacattcttaaatatggtactaagaccactttttaatattgaa 40408394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 202
Target Start/End: Original strand, 16947993 - 16948169
Alignment:
Q  21 agttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagg 120  Q
    ||||||| |||||||||| ||||| ||| |||| || |||||| ||| ||| ||| || || ||||||||||    || |||||| ||||||||||||||    
T  16947993 agttactgggttgagtcatgaccatgtcactcttttcaagacgattcatggtactgcctaaaattgtgcaag----actatcaactacgccgcctccagg 16948088  T
Q  121 ataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggt 202  Q
    || ||||||||  ||    |||||||||| ||||||||| ||||||||  || | ||| |||||||||||||| ||||||||    
T  16948089 at-aaaacaagttcattgacaactgtgcgattaactactacactgtagctaatcattctagaattacaccctcgaatatggt 16948169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 13710669 - 13710761
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  13710669 tgagtcacgaccag-tcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 13710761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 8083121 - 8083029
Alignment:
Q  34 agtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||| |||||||||||||||||||||||||  ||||||| | ||  | |||||||| |||| | ||||| ||||||||||| |||||||    
T  8083121 agtcacgatcaggtcgctctctttaagacgtttcacggcactatccaagttagtgcaaggtagactaacaaccgcgccgcctccaagataaaa 8083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 32221203 - 32221163
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagac 62  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32221203 gttactaggttgagtcacgaccaggtcgctctctttaagac 32221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 7903063 - 7903005
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||||    
T  7903063 cgttcgagaaataacactctctaatatggtactaagaccactctttaatactgaaacca 7903005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 1151404 - 1151299
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccg-cctccagg 120  Q
    |||||||||||||||| ||| ||| || |||||||||||||||||| || ||||| | || |||||||||| |  || ||||| ||||||| |||||||     
T  1151404 gttactaggttgagtcgcgatcagatcactctctttaagacgtttcatgacactatccaaaattgtgcaagactaactatcaatcacgccgccctccagt 1151305  T
Q  121 ataaaa 126  Q
    ||||||    
T  1151304 ataaaa 1151299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 15134283 - 15134350
Alignment:
Q  165 gtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    ||||||||| |||||||| ||| ||||| ||||||||||||||| | | ||||||||||| |||||||    
T  15134283 gtagaaaactgttcgagatttatacccttaaatatggtactaaggctattctttaatactaaaaccac 15134350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 55810234 - 55810176
Alignment:
Q  173 ccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaacca 231  Q
    |||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||    
T  55810234 ccgttcgagaattacacgttcaa-tatggtactaagaccactcttttaatactgaaacca 55810176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 16596017 - 16595936
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||| ||||||||  | || ||||||||| ||||||  ||||||||| || | |||||||||||    
T  16596017 aggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaa-gcagactgtcaaccacgacgtccccaggataaaa 16595936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 20513118 - 20513199
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||| ||||||||||||| |  || ||||||||| |||||| |||||||||| ||   |||||||||||    
T  20513118 aggtcgctctctttaagatgtttcgtggcactgctcaaaattgtgcaa-gcagactatcaaccacgacgttcccaggataaaa 20513199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 41816922 - 41816980
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||||  ||||||||    
T  41816922 cgttcgagaaataacaccctctaatatggtactaagaccactctttaatgttgaaacca 41816980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 9764115 - 9764023
Alignment:
Q  33 gagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||   |||||||| |||||||||||||||| ||  |||||||||| |||| | ||||| | ||| ||| |||||||||    
T  9764115 gagtcacgaccaggtcgcctactttaagatgtttcgtggcactacctaa-gttgtgcaaggtagactaacaaccgcaccgtctctaggataaaa 9764023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 3998155 - 3997956
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaac 128  Q
    ||||||||||||||||||||||| |||||||||    ||  |||||||||  | ||||||||| | |||| | |||||  |  ||||||||||||||| |    
T  3998155 ggttgagtcacgaccaggtcgctttctttaagataaatcacggcactacccgaaattgtgcaaagtagactaacaaccgtgt-gcctccaggataaaa-c 3998058  T
Q  129 aagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaa 227  Q
    || ||  | | || |||| || |||| |||||||| ||| |  | |||||||||| || ||||||  ||||||||||||| |||| ||||||||||||||    
T  3998057 aaccc--agttcacctgttcgattaaatactgcaccgtatatgatcgttcgagaaataacaccctataatatggtactaaaaccattctttaatactgaa 3997960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 30564504 - 30564444
Alignment:
Q  38 acgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagac 98  Q
    ||||| |||||||||||| |||||||||||| ||||||||| ||  |||||||||| ||||    
T  30564504 acgactaggtcgctctctgtaagacgtttcgcggcactacccaaatttgtgcaaggtagac 30564444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 33723025 - 33722922
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| |||||| || || ||||| ||||||||||||||||||||| ||||  | || ||||||||| |||||| ||| |||||| || | ||||||    
T  33723025 ttactaggctgagtcgcggactaggtcactctctttaagacgtttcgtgacactgtccaaaattgtgcaa-gcagaccatcgaccacgacgtccccagga 33722927  T
Q  122 taaaa 126  Q
    |||||    
T  33722926 taaaa 33722922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 39217356 - 39217286
Alignment:
Q  166 tagaaaaccgttcgagaattacaccctcaaatatgg-tactaagaccactc---tttaatactgaaaccac 232  Q
    ||||||| ||||||||| ||||||||||||| |||| || |||||||||||   |||||||||||||||||    
T  39217356 tagaaaatcgttcgagacttacaccctcaaacatggctattaagaccactcgaatttaatactgaaaccac 39217286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 6070576 - 6070627
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 73  Q
    |||||||| |||||||| |||||| ||||||||||||||| ||||| |||||    
T  6070576 gttactagattgagtcatgaccagatcgctctctttaagatgtttcctggca 6070627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 10318878 - 10318839
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 68  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  10318878 ggttgagtcacgaccatgtcgctctctttaagacatttcg 10318839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 52691158 - 52691091
Alignment:
Q  25 actaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaag 92  Q
    ||||||||||||||||| ||  |||||||||||||||||||| ||| | || || || ||||||||||    
T  52691158 actaggttgagtcacgatcatatcgctctctttaagacgttttgtgactctgcccaaaattgtgcaag 52691091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 15020549 - 15020468
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||| ||||||||||| |||||||||| |||| || || |||||||||  ||||| |||||||||| |||  |||||||||||    
T  15020549 aggttgctctctttaaaacgtttcgtgacacttcccaaaattgtgcaa-acagactatcaaccacgacgctcccaggataaaa 15020468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 31298345 - 31298287
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || |||| |||||||||||||||  |||||||||||||| ||||||||    
T  31298345 cgttcgagaaataacaccatcaaatatggtactataaccactctttaatattgaaacca 31298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 34560588 - 34560622
Alignment:
Q  197 tatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||||||||||||||||||| ||||||||    
T  34560588 tatggtactaagaccactctttaatattgaaacca 34560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 39319628 - 39319666
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttc 67  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  39319628 ggttgagtcacgatcaggtcgctttctttaagacgtttc 39319666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Original strand, 55073320 - 55073350
Alignment:
Q  159 tgcactgtagaaaaccgttcgagaattacac 189  Q
    |||||||||||||||||||||||||||||||    
T  55073320 tgcactgtagaaaaccgttcgagaattacac 55073350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 34560494 - 34560527
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagac 62  Q
    ||||||||||||||||||||||| ||||||||||    
T  34560494 ggttgagtcacgaccaggtcgctttctttaagac 34560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 34644554 - 34644651
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||| || |||||| |||||||||||||||| | ||||| |  |  ||||| |||| | || | ||||| |||||||| ||||||||||    
T  34644554 ggttgagtcacgatcatgtcgctttctttaagacgtttcgcgacactatccgagtttgtgtaaggtaaactaacaaccgcgccgcctacaggataaaa 34644651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 39319730 - 39319770
Alignment:
Q  191 ctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||| |||||||||||||| ||||||| |||||||||||||    
T  39319730 ctcagatatggtactaagatcactcttcaatactgaaacca 39319770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 175; Significance: 3e-94; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 1935099 - 1934890
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  1935099 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 1935000  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1934999 taaaa-caagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 1934901  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  1934900 actgaaaccac 1934890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 9180830 - 9180616
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||| ||||||||||||||||||||||    
T  9180830 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 9180731  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || |||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9180730 taaaa-caagcccagctacaactgtttgattaactactgcactgtagaaaatcgttcgagaattacaccctcaaatatggtactaagaccactctttaat 9180632  T
Q  222 actgaaaccacctatg 237  Q
    ||||||||||||||||    
T  9180631 actgaaaccacctatg 9180616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 9189909 - 9189695
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||  | || |||||||||||||||| ||||||||||||||||||||||    
T  9189909 gttactaggttgagtcacgaccaggttgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 9189810  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || |||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9189809 taaaa-caagcccagctacaactgtttgattaactactgcactgtagaaaatcgttcgagaattacaccctcaaatatggtactaagaccactctttaat 9189711  T
Q  222 actgaaaccacctatg 237  Q
    ||||||||||||||||    
T  9189710 actgaaaccacctatg 9189695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 31326728 - 31326936
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||| || || |||||||||||||||| |||||||||||| |||||||||    
T  31326728 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatgccactgcccaaaattgtgcaaggcagactatcaaccacgccacctccagga 31326827  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31326828 t-aaaacaagcccaactacaactgtgcgattaactactgcact-tagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactatttaat 31326925  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  31326926 actgaaaccac 31326936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 30658252 - 30658460
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||||||||||||||    
T  30658252 gttactatgttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccagga 30658351  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccac-tctttaa 220  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| || | |||||    
T  30658352 t-aaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagacaacttttttaa 30658449  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  30658450 tactgaaacca 30658460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 25497431 - 25497223
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||| || ||  ||||||||| ||||| ||||||||||||||||||||||    
T  25497431 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaaccacgccgcctccagga 25497332  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25497331 t-aaaacaagcccagctacaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatgatactaagaccactctttaat 25497234  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  25497233 attgaaaccac 25497223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 29677756 - 29677965
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||| ||||||||||||| || |||||||| ||||||| |||||    
T  29677756 gttactaggttgagtcacgaccaggtcgctctcattaagacatttagtggcactgccaaaaattgtgcaaggcaaactatcaaccaagccgcctacagga 29677855  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    |||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29677856 taaaaa-aagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacccacaaatatggtactaagaccactctttaat 29677954  T
Q  222 actgaaaccac 232  Q
    | ||| |||||    
T  29677955 attgataccac 29677965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 30650918 - 30651127
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||| ||    
T  30650918 gttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaaga 30651017  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||| || ||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  30651018 t-aaaacaagcccagctacaactgttcgattaactactgcaccgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 30651116  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  30651117 actgaaaccac 30651127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 12796914 - 12797125
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| |||||||| || || ||||| |||| ||||| ||||||||||||| ||||||||    
T  12796914 gttattaggttgagtcacgaccagatcgctctctttaagacgttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtctccagga 12797013  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||  || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12797014 taaaa-caagtccggctacaactgtgcggttaactactgcaccgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 12797112  T
Q  222 actgaaaccacct 234  Q
    |||||||||||||    
T  12797113 actgaaaccacct 12797125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 22 - 228
Target Start/End: Complemental strand, 10160830 - 10160626
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  10160830 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 10160731  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  10160730 t-aaaacaagctcagctgcaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccattcttttaa 10160634  T
Q  221 tactgaaa 228  Q
    ||||||||    
T  10160633 tactgaaa 10160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 18344420 - 18344629
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| || |||||||||| ||||||||    
T  18344420 gttactagattgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccagga 18344519  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||| || |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||    
T  18344520 t-aaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactatttaat 18344618  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  18344619 actgaaaccac 18344629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 25478403 - 25478195
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||| || || |||||||||||||||| |||||||||||||||||||| |    
T  25478403 gttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaa 25478304  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  25478303 t-aaaacaagcccagctacaactgtgcgaataacta-tgcactgtagaaaaccgttcaagaattacaccctcaaatatagtactaagaccactctttaat 25478206  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  25478205 actgaaaccac 25478195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 19892572 - 19892363
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||  | || |||||||||  ||||| ||||||||||||||||||||||    
T  19892572 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcctggcactgtccaaaattgtgcaacacagactatcaaccacgccgcctccagga 19892473  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| || || ||||||| || |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  19892472 taaaa-caagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 19892374  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  19892373 actgaaaccac 19892363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 29677370 - 29677554
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| || || ||||||||| |||||| ||||||||||||||||||||||    
T  29677370 gttactaggttgagtcacgatcatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaagcagactatcaaccacgccgcctccagga 29677469  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaa 207  Q
    | |||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29677470 t-aaaataagtccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaa 29677554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 35601911 - 35602119
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||  | || |||||||||| ||||  ||||||||||||||||||||||    
T  35601911 gttactaggttgaatcacgaccaggtcgctctttttaagacgtttcgtggcactgtccaaaattgtgcaagacagagtatcaaccacgccgcctccagga 35602010  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||| |||| || ||| ||| || |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  35602011 t-aaaacaaacccagctacaattgttcgattaactactgcactgtagaaaaccgttcgagaattacacatccaaatatggtactaagaccactctttaat 35602109  T
Q  222 actgaaacca 231  Q
    | ||||||||    
T  35602110 attgaaacca 35602119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 228
Target Start/End: Complemental strand, 7737957 - 7737752
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  7737957 gttactaggttgagtcacgaccatgtcgctctctttaagaagttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 7737858  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||||||||| ||| ||| || ||||||| |||||||||||||||||||||||||||||| |||| |||||| ||| || |||| || |||||    
T  7737857 t-aaaacaagcccaactacaattgttcgattaactattgcactgtagaaaaccgttcgagaattaca-cctccaatatgataccaaaaccattcttttaa 7737760  T
Q  221 tactgaaa 228  Q
    ||||||||    
T  7737759 tactgaaa 7737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 28603287 - 28603501
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcct----cc 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||  | || |||||||||| ||||| |||||||||||  |||    ||    
T  28603287 gttactaggttgagtcacgaccaggtcgctctctttaaaacgtttcgtgacactgtccaaaattgtgcaagacagactatcaaccacgctacctacctcc 28603386  T
Q  118 aggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctt 217  Q
    ||||||||||||||  || || ||||||| || ||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||||||| ||    
T  28603387 aggataaaaacaagttcagctacaactgttcgattaactactgcactgtaaaaaaccgttcaagaattacacctccaaatatggtactaagaccactttt 28603486  T
Q  218 taatactgaaaccac 232  Q
    ||||| |||||||||    
T  28603487 taatattgaaaccac 28603501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 19094601 - 19094388
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||| |||||||||||| |||| ||||||  ||| ||| || || ||||||||||||| |  ||||||||| ||||||||||||    
T  19094601 gttattaggttgagtcacgatcaggtcgctctccttaaaacgttttttggtactgcccaaaattgtgcaaggcaaaatatcaaccacaccgcctccagga 19094502  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg-tactaagaccactc---tt 217  Q
    ||||||||||| || || |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||   ||    
T  19094501 taaaaacaagctcagctacaactgtgcgattaattactgcactgtagaaaaccgttcgagaattacaccctcaaatatggctattaaggccactccaatt 19094402  T
Q  218 taatactgaaacca 231  Q
    ||||||||||||||    
T  19094401 taatactgaaacca 19094388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 30631568 - 30631780
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||  ||||| |||||||||| || |||||||||| | ||||| ||||||||||  |||| |||||||||||| |||||||||    
T  30631568 gttactaggttgagtcacgattaggtcactctctttaaaacttttcgtggcattgccaaaaattgtgcaagaaagactatcaaccacgccacctccagga 30631667  T
Q  122 taaaaacaagcccaactgcaac---tgtgcggttaactactgcactgtagaaaaccgttcgagaa-ttacaccctcaaatatggtactaagaccactc-t 216  Q
    | ||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||| |||| |    
T  30631668 t-aaaacaagcccaactgcaactgttgtgcggttatctactgcactgtagaaaaccgttcgagaatttacaccttc-aatatggtactaagacaactctt 30631765  T
Q  217 ttaatactgaaacca 231  Q
    |||||| ||||||||    
T  30631766 ttaatattgaaacca 30631780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 19578520 - 19578320
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||| |||| |||||||| || |||||||||     
T  19578520 gttattaggttgagtcacgaccagatcgctctctttaagacgttttgtggcactacctaaaattgtgcaaggaagactatcaaccatgctgcctccaggg 19578421  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||| |||||| ||| || ||||||||||| |||||||||||||| ||||||||| ||||||| || ||||||||| ||| | |||||||||||    
T  19578420 t-aaaacaagtccaactacaattgggcggttaactattgcactgtagaaaatcgttcgagatttacaccttc-aatatggtattaaaatcactctttaat 19578323  T
Q  222 act 224  Q
    |||    
T  19578322 act 19578320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 21523825 - 21523625
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||| || || ||||||||||| |||| |||||||||||||| || |||     
T  21523825 gttaataggttgagtcacgaccaggttgctatctttaa-acgtttcgtggcactgcccaaaattgtgcaagggagactatcaaccacgccgcttctaggt 21523727  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||  || || |||||||||||||||||||||     ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||     
T  21523726 taaaa-caagttcagctacaactgtgcggttaactactg-----tagaaaatcgttcgagatttacaccctcaaatatggtactaagaccactctttaaa 21523633  T
Q  222 actgaaac 229  Q
    ||| ||||    
T  21523632 acttaaac 21523625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 42926867 - 42926714
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagac--gtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccag 119  Q
    |||||||||||||||||||| |||| |||||||||||||||  ||||||||||||| || || ||||||||||| |||| ||||||||||||||||||||    
T  42926867 gttactaggttgagtcacgatcaggccgctctctttaagacacgtttcgtggcactgcccaaaattgtgcaaggtagactatcaaccacgccgcctccag 42926768  T
Q  120 gataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaacc 174  Q
    ||| || |||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  42926767 gat-aatacaagctcaactacaactgtgcggttaactactgcaccgtagaaaacc 42926714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 40847701 - 40847496
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| |||||||||||||| |||| |||||||||||||||| ||||||||    ||  |||||||||||| || |||||||||||| ||||| |||    
T  40847701 gttactagattgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttgtgcaaggcaaactatcaaccacgccacctcctgga 40847602  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg-tactaagaccactctttaa 220  Q
    ||||| |||| |||||| |||||||| |||||||||||      ||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||    
T  40847601 taaaa-caagtccaactacaactgtgtggttaactacta-----tagaaaaccgttcgagatttacactctcaaatatggttaccaagaccactctttaa 40847508  T
Q  221 tactgaaaccac 232  Q
    || |||||||||    
T  40847507 tattgaaaccac 40847496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 17545405 - 17545195
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctct-ttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagg 120  Q
    ||||||||||||||| |||| ||||||| | | | ||||||||||||||| ||||    ||  ||||||||   |||| |||||||||||| |||| |||    
T  17545405 gttactaggttgagttacgatcaggtcgttttttcttaagacgtttcgtgacacttttcaaagttgtgcaaaaaagactatcaaccacgccacctcgagg 17545306  T
Q  121 ataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaa 220  Q
    |||||| ||||| || || |||| |||||||||||||  ||| ||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||    
T  17545305 ataaaa-caagcacatctacaacagtgcggttaactaacgcattgtagaaaatcattcgagatttacaccctcaaatatgatactaagaccactctttaa 17545207  T
Q  221 tactgaaaccac 232  Q
    ||| ||||||||    
T  17545206 tacggaaaccac 17545195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 169
Target Start/End: Complemental strand, 35639103 - 35638957
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||| || || |||||||||| |||   ||||||||||||||||||||||    
T  35639103 gttactaagttgaatcacgatcaggtcgctctttttaagacgtttcgtggcactgcccaaaattgtgcaagacagcgtatcaaccacgccgcctccagga 35639004  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtaga 169  Q
    | ||||||||| || || ||||||| || |||||||||||||||||||    
T  35639003 t-aaaacaagctcagctacaactgttcgattaactactgcactgtaga 35638957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 17453564 - 17453488
Alignment:
Q  144 tgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||    
T  17453564 tgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccattctataat 17453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 42914639 - 42914735
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  42914639 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 42914735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 42723546 - 42723453
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  42723546 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 42723453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 42728715 - 42728622
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  42728715 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 42728622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 44096302 - 44096395
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  44096302 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 44096395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 44754691 - 44754598
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  44754691 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 44754598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 44759857 - 44759764
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  44759857 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 44759764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 5089277 - 5089371
Alignment:
Q  31 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| | ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  5089277 ttgagtcatgaccaggtcgctctctttaagacgtttcgcggcactatccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 5089371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 40518567 - 40518474
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| || || |||||||| |||| | ||||| ||||| |||||||||||||    
T  40518567 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-atagtgcaaggtagactagcaaccgcgccgtctccaggataaaa 40518474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 160031 - 160134
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||  | ||||||| || ||||||||||| || | ||||||| || |||||||  |||    
T  160031 ttactaggttgagacacgaccaggtcgctctctttaatacgtttcacgacactacccaaaattgtgcaaggtaggctatcaaccgcgtcgcctccgagat 160130  T
Q  123 aaaa 126  Q
    ||||    
T  160131 aaaa 160134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 28751824 - 28751731
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||| ||  |||||||||| |||||| ||||| | ||| |||||||||||||    
T  28751824 tgagtcacgaccaggtcgctttcttttagacgtttcgcggcactacctaa-gttgtgcaaggtagacaagcaaccgcaccgtctccaggataaaa 28751731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 6297984 - 6297785
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaac 128  Q
    ||||||||||||||||||||||| ||||||||||   ||  |||||||||  | ||||||||||| |||| | |||||  |  ||||||||||||||| |    
T  6297984 ggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtgt-gcctccaggataaaa-c 6297887  T
Q  129 aagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaa 227  Q
    |   || | | || |||| || |||| |||||||| ||| |  | |||||||||| || ||||||| |||||| ||||||||||| ||||||||||||||    
T  6297886 at--cctagttcacctgttcgattaaatactgcaccgtatatgatcgttcgagaaataacaccctctaatatgttactaagaccattctttaatactgaa 6297789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 44957542 - 44957439
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||||| | || |||||| |||||||||||||||| |||||||| | ||| ||||||||| |||||| |||||||||| |  ||||||||    
T  44957542 ttactaggctgagtcatggactaggtcgttctctttaagacgttttgtggcactgcaaaaaattgtgcaa-gcagactatcaaccacgacatctccagga 44957444  T
Q  122 taaaa 126  Q
    |||||    
T  44957443 taaaa 44957439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 40392319 - 40392412
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||   | | |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  40392319 tgagtcacgaccagactgttttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccacgccgtctccaggataaaa 40392412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 39542900 - 39542946
Alignment:
Q  31 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactac 77  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||    
T  39542900 ttgagtcacgatcaggtcgctctctttaagacgtttcacggcactac 39542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 19538382 - 19538429
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcacta 76  Q
    ||||||||||||||||||||||| |||||||||| ||||  |||||||    
T  19538382 ggttgagtcacgaccaggtcgctttctttaagacatttcacggcacta 19538429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 19538523 - 19538581
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || ||| ||| ||||||||| ||||| |||||||||||||||||||||    
T  19538523 cgttcgagaaataacactctctaatatggtattaagatcactctttaatactgaaacca 19538581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 20711434 - 20711516
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaa 104  Q
    |||||||||||||||||||||||  || |||  ||||||| ||||||| ||||| |  || |||||||||| ||||| |||||    
T  20711434 gttactaggttgagtcacgaccatatcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatcaa 20711516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 28855143 - 28855200
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || |||||||| |||||||||||||| ||||| |||||||||||||||    
T  28855143 cgttcgagaaataacaccctcagatatggtactaagatcactc-ttaatactgaaacca 28855200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 201
Target Start/End: Original strand, 32079377 - 32079546
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcacta-ccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaa 130  Q
    |||||||||| ||||| |||||||||||||  ||| ||| | ||  |||||  || || |||| |||| ||||| ||||  | |||||||||||||| |     
T  32079377 tgagtcacgatcaggttgctctctttaagaaattttgtgacgctgtccaaaatttatgtaaggtagactatcaatcacgttgtctccaggataaaaa-ag 32079475  T
Q  131 gcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
    |  || || |||||||||| ||||||| |||| | |||  || ||||||||||||||||||| ||||||||    
T  32079476 gttcagctacaactgtgcgattaactattgcattatagctaatcgttcgagaattacacccttaaatatgg 32079546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 14104580 - 14104633
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcact 75  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| ||||    
T  14104580 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgtcact 14104633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 39542610 - 39542566
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 67  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||||    
T  39542610 ttaccaggttgagtcacgactaagtcactctctttaagacgtttc 39542566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 4930222 - 4930433
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||| || || ||||||||||||||||||||||    
T  4930222 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagtcatactatcaaccacgccgcctccagga 4930321  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4930322 taaaa-caagcccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcatatatggtactaagaccactctttaat 4930420  T
Q  222 actgaaaccacct 234  Q
    |||||||||||||    
T  4930421 actgaaaccacct 4930433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 22 - 234
Target Start/End: Complemental strand, 44423243 - 44423032
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact-accaaatattgtgcaaggcagacaatcaaccacgccgcctccagg 120  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||| ||||||||||||||    
T  44423243 gttactaggttgagtcacgatcagatcgctctctttaagacgtttcgtggcactgaccaaa-attgttcaaggcagactatcaactacgccgcctccagg 44423145  T
Q  121 ataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaa 220  Q
    |||||| |||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44423144 ataaaa-caagtccatctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaa 44423046  T
Q  221 tactgaaaccacct 234  Q
    ||||||||| ||||    
T  44423045 tactgaaactacct 44423032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 30 - 231
Target Start/End: Original strand, 23866065 - 23866265
Alignment:
Q  30 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaaca 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  23866065 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggat-aaaaca 23866163  T
Q  130 agcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaa 228  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||| ||||||    
T  23866164 agctcagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatgctgaaa 23866262  T
Q  229 cca 231  Q
    |||    
T  23866263 cca 23866265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 26341188 - 26341397
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  26341188 gttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 26341287  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||| ||| || ||||||| || ||||||||| |||||||||||| | ||| |||||||||||  |||||||||||||||||||||||||||||    
T  26341288 t-aaaacaagtccagctacaactgttcgattaactactacactgtagaaaatcattcaagaattacacctccaaatatggtactaagaccactctttaat 26341386  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  26341387 actgaaaccac 26341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 4579497 - 4579675
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  4579497 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 4579596  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
    | |||||||| ||| || |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4579597 t-aaaacaagtccagctacaactgtgcgattaactactgcactgtagaaaaccgttcaagaattacaccctcaaatatgg 4579675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 44510783 - 44510574
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||||||  | || |||||||||| ||||| ||||||||||||||||||||||    
T  44510783 gttactaggttgagtcacgaccagattgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccgcctccagga 44510684  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | |||||    
T  44510683 t-aaaacaagctcagctgcaactgtgcggttaacttctgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccacacttttaa 44510586  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  44510585 tactgaaaccac 44510574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 9651073 - 9650862
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  9651073 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 9650974  T
Q  122 taaaaacaagccca---actgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tt 217  Q
    | |||||||| |||    |||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||| ||    
T  9650973 t-aaaacaagtccagctgctgcaactgtacggttgactactgcactgtagaaaaccgttcgagaattaca-cttttaatatggtactaagaccactcttt 9650876  T
Q  218 taatactgaaacca 231  Q
    ||||||||||||||    
T  9650875 taatactgaaacca 9650862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 13314342 - 13314134
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || || ||||||||||| |||| |||| ||||| |||||||||||    
T  13314342 gttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggtactgcccaaaattgtgcaaggtagactatcagccacgtcgcctccagga 13314243  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| || || ||||||| |  ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  13314242 t-aaaacaagctcagctacaactgttcaattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaagaccactc-ttaat 13314145  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  13314144 actgaaaccac 13314134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 27238231 - 27238440
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |  || |||||| ||||||||| ||||| |||||||||| || ||    
T  27238231 gttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgctcaaaattgtgtaaggcagactatcaatcacgccgcctgcaaga 27238330  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| || |||||| | | |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  27238331 taaaa-caagtccagctacaactgcgtgcttaactactgcactgtagaaaatcgttcgagatttacaccctcaaatatgatactaagaccactctttaat 27238429  T
Q  222 actgaaaccac 232  Q
     ||||||||||    
T  27238430 tctgaaaccac 27238440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 3357738 - 3357528
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||  || ||  ||||||||||||||| ||||||||||||| ||||| ||    
T  3357738 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaaccacgccgtctccatga 3357639  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||||||| | ||||| ||| |||| ||||||| | |||||||||||||| ||||| ||| ||||||||| |||||||||||||||| |||||||||||    
T  3357638 taaaaacaaacacaactacaattgtgtggttaaccattgcactgtagaaaatcgttcaagatttacaccctaaaatatggtactaagatcactctttaat 3357539  T
Q  222 actgaaaccac 232  Q
    || ||||||||    
T  3357538 accgaaaccac 3357528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 25543468 - 25543259
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||| ||| || || ||||||||||  | || |||||||||  |||||||||||    
T  25543468 gttactaggttgagtcacaatcaggtcgcactctttaagacgtttcgtggtactgcctaaaattgtgcaagataaactatcaaccacatcgcctccagga 25543369  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  25543368 t-aaaacaagtctagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaa 25543271  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  25543270 tactgaaaccac 25543259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 8268282 - 8268492
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||  |||||||||||||||||||||||||||||||||||| ||||||||  | || |||||||||| ||||| |||||||||||| |||||| ||    
T  8268282 gttactatattgagtcacgaccaggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccatga 8268381  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtag-aaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaa 220  Q
    | |||||||| ||| || ||||||| || ||||||||||||| |||| |||||||||||| |||||||||  ||||||||||||||||| |||||||||     
T  8268382 t-aaaacaagtccagctacaactgttcgattaactactgcaccgtagaaaaaccgttcgataattacacctccaaatatggtactaagatcactctttag 8268480  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  8268481 tactgaaaccac 8268492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 201
Target Start/End: Complemental strand, 23247039 - 23246861
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  23247039 gttactagattgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 23246940  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
    | ||||||||| || || |||||||||| ||||||||||   | ||||||||||||| | ||||||||||||||||||||    
T  23246939 t-aaaacaagctcacctacaactgtgcgattaactactgttttatagaaaaccgttccaaaattacaccctcaaatatgg 23246861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 10388471 - 10388264
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| | || ||  ||||||| |  ||||| ||||| |||||||||||||||    
T  10388471 gttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcattgcccaag-ttgtgcatgatagaca-tcaacaacgccgcctccagga 10388374  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||| | ||||| |||||||||| |||||||||||||| || ||||  |||||||| ||||||||||||||| |||||||| |||||||||||||    
T  10388373 taaaa-caaactcaactacaactgtgcgattaactactgcactctaaaaaattgttcgagatttacaccctcaaataaggtactaataccactctttaat 10388275  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  10388274 actgaaaccac 10388264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 8076039 - 8076227
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||| ||||||||||    
T  8076039 gttactgggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccagga 8076138  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttt 218  Q
    | ||||||||| || ||||||||||||| ||||||     |||||||||||| ||||||| |||||||| || ||||||||||||||||||||||||    
T  8076139 t-aaaacaagctcagctgcaactgtgcgattaact-----actgtagaaaactgttcgag-attacaccttc-aatatggtactaagaccactcttt 8076227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 12799460 - 12799604
Alignment:
Q  83 attgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgaga 182  Q
    |||||||||||||||| |||||||||||| | ||||||||||||  ||| ||| || ||||||||||||||||||||||| || ||||||||||||||||    
T  12799460 attgtgcaaggcagactatcaaccacgccacatccaggataaaat-aagtccagctacaactgtgcggttaactactgcattgcagaaaaccgttcgaga 12799558  T
Q  183 attacaccctcaaatatggtactaagaccactctttaatactgaaa 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12799559 attacaccctcaaatatggtactaagaccactctttaatactgaaa 12799604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 3879985 - 3880193
Alignment:
Q  22 gttactaggtt-gagtcacgaccaggtcgctctctttaagacgtttcgtggcactac-caaatattgtgcaaggcagacaatcaaccacgccgcctccag 119  Q
    ||||||||||| ||||||||| |||||| || |||||||||||||| ||| ||||   ||||  ||||| |||| |||| ||||||||||||||||||||    
T  3879985 gttactaggtttgagtcacgatcaggtcactttctttaagacgttttgtgacactgttcaaaatttgtgtaaggaagactatcaaccacgccgcctccag 3880084  T
Q  120 gataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttta 219  Q
    |||||||    |||| ||| ||||| || |||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  3880085 gataaaa----gccccactacaactatgtggttaactactgcactgtagaaaatcgttcgagaattacactctcaaatatgatactaagaccactcttta 3880180  T
Q  220 atactgaaaccac 232  Q
    ||| |||||||||    
T  3880181 atattgaaaccac 3880193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 12254068 - 12254276
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||| |||||||| || ||  ||||||||||||||| ||||| |||||||||| |||||    
T  12254068 gttaccaggttgagtcgcgaccaggtcgctctctttaagatgttttgtggcactgcctaaagttgtgcaaggcagactatcaatcacgccgcctacagga 12254167  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||  || || |||||||||||||||||| |||  |||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||  |    
T  12254168 t-aaaacaagttcagctacaactgtgcggttaactaatgctgtgtagaaaaccgtttgagatttaca-cctcaaatatggtactaagtccagtctttcct 12254265  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  12254266 actgaaaccac 12254276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 9008152 - 9008346
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||  || |||||||||||||| | ||||| || |  ||||||||||    
T  9008152 gttactaggttgagtcacgaccatgtccctctctttaagacgtttagtgacactactcaaaattgtgcaaggcaggctatcaatcatgaagcctccagga 9008251  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttt 218  Q
    | |||||||| |||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||| || |||||| |||||| | ||||||||    
T  9008252 t-aaaacaagtccaactacaactgtgtgattaactactgcactgtagaaaatcgttcgagaattacaccttc-aatatgatactaaaatcactcttt 9008346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 30258167 - 30258298
Alignment:
Q  100 atcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatat 199  Q
    ||||| ||||||||||||||||||||| |||| ||| || |||| ||||||||||||||||||||||||||||  |||||| | ||||||| ||||||||    
T  30258167 atcaatcacgccgcctccaggataaaa-caagtccagctacaacagtgcggttaactactgcactgtagaaaattgttcgaaatttacaccttcaaatat 30258265  T
Q  200 ggtactaagaccactctttaatactgaaaccac 232  Q
    |||||||||||||||||||||||||||||||||    
T  30258266 ggtactaagaccactctttaatactgaaaccac 30258298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 21671184 - 21671393
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||| ||| | |||||||||||| |||| |||||||| || ||  |||||||||||||||||||||| ||  ||| ||||| |    
T  21671184 gttactaggttgagtcacgactaggaccctctctttaagaagtttagtggcactgcccaaagttgtgcaaggcagacaatcaacaacttcgcatccagaa 21671283  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||| ||| | |||| ||||||| || ||||||| || |||||    
T  21671284 t-aaaacaagctcacctacaactgtgcggttaactactgcagtgtagaaaatcgttcgagattta-aacctccaatatgggacaaagaccattcttttaa 21671381  T
Q  221 tactgaaaccac 232  Q
    || |||||||||    
T  21671382 taatgaaaccac 21671393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 221
Target Start/End: Original strand, 3284740 - 3284915
Alignment:
Q  46 gtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactg 145  Q
    |||||||||||||||| ||||||||  |||    ||  ||||||||| ||||| ||||||||| ||| || || ||||||||||| | || || |||| |    
T  3284740 gtcgctctctttaagatgtttcgtgctactgttcaaacttgtgcaagacagactatcaaccacaccgtcttcatgataaaaacaaactcagctacaaccg 3284839  T
Q  146 tgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3284840 tgcggttaactaccgcacaatagaaaaccgttcgagaattacaccctcaaatatggtactgagaccactctttaat 3284915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 42626616 - 42626486
Alignment:
Q  103 aaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggt 202  Q
    ||||| |||||| |||||||||||  ||| ||| || ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  42626616 aaccatgccgccgccaggataaaat-aagtccagctacaactgtgcggttaattactgcactgtagaaaatcgttcgagaattacaccctcaaatatggt 42626518  T
Q  203 actaagaccactctttaatactgaaaccacct 234  Q
    ||||||| |||||||||||| | |||||||||    
T  42626517 actaagatcactctttaatattaaaaccacct 42626486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 16372387 - 16372595
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || || ||||||| ||||| ||||   ||| |||||||| ||    
T  16372387 gttactaggttgagtcacgaccaagtcgctctctttaagatgtttcgtggcactacc-aagatcgtgcaagacagactatca---acgtcgcctccaaga 16372482  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg-tactaagaccactc---tt 217  Q
    | ||||||||  | ||| | ||| |||| ||||||||| |||||||||||| |||| |||||||| ||| |||||||||| || |||| ||||||   ||    
T  16372483 t-aaaacaagtgcgactac-actatgcgattaactacttcactgtagaaaatcgtttgagaattaaaccatcaaatatggctattaaggccactcgaatt 16372580  T
Q  218 taatactgaaaccac 232  Q
    |||||||||||||||    
T  16372581 taatactgaaaccac 16372595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 231
Target Start/End: Complemental strand, 6591054 - 6590877
Alignment:
Q  57 taagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaact 156  Q
    |||||||||| ||||||||  | || |||||||||||||||| |||||||||||||||| |||||||||| ||||  ||  |  ||||||| | ||||||    
T  6591054 taagacgttttgtggcactgtctaaaattgtgcaaggcagactatcaaccacgccgccttcaggataaaa-caagttcagttataactgtgtgattaact 6590956  T
Q  157 actgcactgtagaaaaccgttcgagaattacaccctcaaatatgg-tactaagaccactc---tttaatactgaaacca 231  Q
    ||| || ||||||||| |||| ||||||||||||||||||||||| || |||| ||||||   ||||||||||||||||    
T  6590955 actacattgtagaaaatcgtttgagaattacaccctcaaatatggctattaaggccactcgaatttaatactgaaacca 6590877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 232
Target Start/End: Complemental strand, 13142973 - 13142798
Alignment:
Q  56 ttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaac 155  Q
    |||||||||||||||||||||   ||  ||||||| | |||||  ||||| |||||||| ||||||||||| ||||  || || |||||||  || ||||    
T  13142973 ttaagacgtttcgtggcactagtcaaagttgtgcatgacagactttcaacaacgccgccaccaggataaaa-caagttcagctacaactgtaaggctaac 13142875  T
Q  156 tactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    || |||||| |||||||| |||||||| ||||||| | |||||||||||||||| |||||||||||| |||||||||    
T  13142874 tattgcactatagaaaactgttcgagatttacaccgttaaatatggtactaagatcactctttaatattgaaaccac 13142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 26287180 - 26287042
Alignment:
Q  93 gcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccct 192  Q
    |||||| ||||||||||||||||||||||||||| |||  ||| || ||||||||| ||||||||||||||| ||||||| ||||||||  ||||| |||    
T  26287180 gcagactatcaaccacgccgcctccaggataaaa-caaatccagctacaactgtgcagttaactactgcactatagaaaatcgttcgagctttaca-cct 26287083  T
Q  193 caaatatggtactaagaccactc-tttaatactgaaaccac 232  Q
    | |||||||||| ||||||| || |||||||||||||||||    
T  26287082 ccaatatggtaccaagaccattcttttaatactgaaaccac 26287042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 29150923 - 29151027
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||| |  || ||||||||||||| || |||||||||| |||||||| ||    
T  29150923 gttactaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgctcaaaattgtgcaaggcaaactatcaaccacgtcgcctccaaga 29151022  T
Q  122 taaaa 126  Q
    |||||    
T  29151023 taaaa 29151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 42627298 - 42627214
Alignment:
Q  27 taggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgcc 111  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||||||||||    
T  42627298 taggttgattcacgaccaggtcgctctctttaagacgtttcgtggcacaacccaaaattgtgcaaagcagactatcaaccacgcc 42627214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 3045679 - 3045752
Alignment:
Q  158 ctgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  3045679 ctgcactgtagaaaatcgttcgagatttacaccctcaaatatggtactaagaccgctctttaatattgaaacca 3045752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 33238002 - 33238095
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  33238002 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 33238095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 47998975 - 47999068
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  47998975 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 47999068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 9973459 - 9973555
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| | ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  9973459 ggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcactatccaa-gttgtgcaaggtagacgaacaaccacgccgtctccaggataaaa 9973555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 24528351 - 24528447
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  24528351 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcattacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 24528447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 2234725 - 2234632
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||||| || ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  2234725 tgagtcacgaccaggttgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 2234632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 16539507 - 16539414
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  16539507 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 16539414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 16626155 - 16626248
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  16626155 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 16626248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 32212749 - 32212656
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||| |||| | ||||| ||| | |||||||||||||    
T  32212749 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgctgtctccaggataaaa 32212656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 33243179 - 33243272
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  33243179 tgagtcacgaccaggtcactctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 33243272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 42571945 - 42572038
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  42571945 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 42572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 47993800 - 47993893
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  47993800 tgagtcacaaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 47993893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 33226416 - 33226507
Alignment:
Q  34 agtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||  || ||||||| |||| | ||||||||||| | |||||||||||    
T  33226416 agtcacgaccaggtcgctctctttaagacgtttcgcggcactacctaa-gttatgcaaggtagactaacaaccacgccgtcaccaggataaaa 33226507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 21081136 - 21081041
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc-aaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||||  ||||||||| |||| | ||||| | ||| |||||||||||||    
T  21081136 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcaccgtctccaggataaaa 21081041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 47177214 - 47177121
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| || ||||||||||    
T  47177214 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtcttcaggataaaa 47177121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 231
Target Start/End: Original strand, 27256239 - 27256438
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaac 128  Q
    ||||||||||||||||||||||| ||||||||||   ||  |||||||||  | ||||||||||| |||| | |||||  |  |||||||||||||||      
T  27256239 ggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtgt-gcctccaggataaaac- 27256336  T
Q  129 aagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaa 227  Q
     ||||||  | || |||| || |||| || ||||| ||| |  | |||||||||| || ||||||| |||||||||||||||||||| ||||||||||||    
T  27256337 -agcccagtt-cacctgttcgattaaatattgcaccgtatatgatcgttcgagaaataacaccctctaatatggtactaagaccactatttaatactgaa 27256434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 28292600 - 28292506
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaa 125  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||||| | ||  |||||||||| |||| | ||||||||||| ||||||||||||    
T  28292600 ggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaa 28292506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 23318092 - 23318182
Alignment:
Q  141 aactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    ||||||||||||||||| |||   ||| ||||  | |||||| ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  23318092 aactgtgcggttaactattgcttcgtacaaaaatggtcgagatttacacc-tccaatatggtactaagaccactctttaatactgaaaccac 23318182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 12934397 - 12934490
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||  |  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  12934397 tgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctga-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 12934490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 17495403 - 17495496
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| ||||| |||||||    
T  17495403 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaagataaaa 17495496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 17557811 - 17557718
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| ||||| |||||||    
T  17557811 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaagataaaa 17557718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 40865310 - 40865252
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  40865310 cgttcgagaaataacaccctctaatatggtactaagaccactctttaatactgaaacca 40865252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 43892858 - 43892951
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||| ||  |||||||||| | || | ||||| ||||| |||||||||||||    
T  43892858 tgagtcacgaccaggtcgctttctttaagacgtttcacggcactacctaa-gttgtgcaaggtaaactagcaaccgcgccgtctccaggataaaa 43892951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 45748688 - 45748562
Alignment:
Q  83 attgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaa---ccgttcg 179  Q
    |||||||||| || |||||||||||||  || | ||  |||||||||||  ||||| ||||| |||| ||||||||||||||||||||||    ||||||    
T  45748688 attgtgcaagccaaacaatcaaccacgttgcttacaatataaaaacaagttcaactacaactatgcgattaactactgcactgtagaaaatcgtcgttcg 45748589  T
Q  180 agaattacaccctcaaatatggtactaa 207  Q
    ||||||| | | ||||||||||||||||    
T  45748588 agaattata-cttcaaatatggtactaa 45748562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 15642236 - 15642371
Alignment:
Q  35 gtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagccc 134  Q
    ||||||| ||||||||||| ||||||||||||| || ||||| | || |||||| ||| || || |||||| ||| |||||||||||  |||||| || |    
T  15642236 gtcacgatcaggtcgctctttttaagacgtttcatgacactatccaaaattgtggaagacaaactatcaactacgtcgcctccagga-caaaacaggctc 15642334  T
Q  135 aactgcaactgtgcggttaactactgcactgtagaaa 171  Q
    | || |||| |  ||||||||||||||||| ||||||    
T  15642335 agctacaacggcacggttaactactgcactatagaaa 15642371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 19640418 - 19640494
Alignment:
Q  156 tactgcactgtagaaaaccgttcgaga-attacaccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||| ||| | || ||||||||| || |||||||||||||||||||||| |||||||||||||||| ||||||    
T  19640418 tactgcaccgtaaataatcgttcgagagataacaccctcaaatatggtactaacaccactctttaatactaaaacca 19640494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 30256844 - 30256919
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagac 98  Q
    |||| |||||||||||||||||| ||||| | |||||||| |||||||||||| || || ||||||||| ||||||    
T  30256844 ttacaaggttgagtcacgaccagatcgctgtttttaagacatttcgtggcactgcccaaaattgtgcaaagcagac 30256919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 19309697 - 19309613
Alignment:
Q  41 accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||| |||||||||||||||| ||||| ||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  19309697 accaggtcgctgtctttaagacgtttcgcggcaccacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 19309613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 22857782 - 22857738
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcacta 76  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||    
T  22857782 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcacta 22857738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 1289416 - 1289335
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||| ||| ||||||  || ||| ||||| |||||| |||||||||  ||||| || |||||||    
T  1289416 aggtcgctctctttaagacgttttgtgacactactcaaaattatgcaa-gcagactatcaaccacaacgccttcaagataaaa 1289335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 23317989 - 23318053
Alignment:
Q  24 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgca 90  Q
    |||||| ||||||||||| ||||||||| | ||||||| |||| |||||||||||||| ||||||||    
T  23317989 tactagattgagtcacgatcaggtcgct-tttttaagatgttttgtggcactaccaaa-attgtgca 23318053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 29478236 - 29478191
Alignment:
Q  46 gtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaa 91  Q
    ||||||||||| |||||||||||||||||| || || |||||||||    
T  29478236 gtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaa 29478191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 26287264 - 26287220
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgttt 66  Q
    ||||||||||||||||||||||| | |||| ||||||||| ||||    
T  26287264 gttactaggttgagtcacgaccatgccgctttctttaagatgttt 26287220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 2e-89; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 37248901 - 37248693
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  37248901 gttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccagga 37248802  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37248801 t-aaaacaagcccagctgcaactgtgcggttaa-tactgtactatagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 37248704  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  37248703 actgaaaccac 37248693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 7451747 - 7451961
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||| ||||||||||| ||||||||||    
T  7451747 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccagga 7451846  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7451847 taaaa-caagctcagctgcaactgtgcggttaactactacactgtagaaaaccgttcgagaattacacctccaaatatggtactaagaccactctttaat 7451945  T
Q  222 actgaaaccacctatg 237  Q
    ||||||||||||||||    
T  7451946 actgaaaccacctatg 7451961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 29168079 - 29167870
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  29168079 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 29167980  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  29167979 t-aaaacaagcccaactacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 29167881  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  29167880 actgaaaccac 29167870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 12103014 - 12103223
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  12103014 gttactaggttgagttacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 12103113  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  12103114 t-aaaacaagcccaactacaaatgtgcgattaactactgcactgtagaaaatcgttcgagaattacacccttaaatatggtactaagatcactctttaat 12103212  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  12103213 actgaaaccac 12103223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 39523038 - 39523247
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||| ||||| ||||||||||||||||||||||    
T  39523038 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 39523137  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  39523138 taaaa-caagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcaagaattacacctccaaatatggtactaagaccactctttaat 39523236  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  39523237 actgaaaccac 39523247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 26667261 - 26667470
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  26667261 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 26667360  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||| ||| |||||||||| || |||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  26667361 t-aaaacaagtccagctgcaactgttcgattaactactgcactctagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 26667459  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  26667460 actgaaaccac 26667470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 26938858 - 26939067
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  26938858 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 26938957  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||| ||| |||||||||| || |||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  26938958 t-aaaacaagtccagctgcaactgttcgattaactactgcactctagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 26939056  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  26939057 actgaaaccac 26939067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 39518399 - 39518608
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||| ||||||| ||||||||||||||||||||||    
T  39518399 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcatggcagactatcaaccacgccgcctccagga 39518498  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  39518499 taaaa-caagtccagctgcaactgtgcggttaactactgcagtgtagaaaaccgttcaagaattacacctccaaatatggtactaagaccactctttaat 39518597  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  39518598 actgaaaccac 39518608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 556684 - 556892
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  556684 gttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 556783  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| || || ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  556784 t-aaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaagaccactctataat 556882  T
Q  222 actgaaacca 231  Q
    ||||||||||    
T  556883 actgaaacca 556892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 561456 - 561664
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  561456 gttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 561555  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| || || ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  561556 t-aaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaagaccactctataat 561654  T
Q  222 actgaaacca 231  Q
    ||||||||||    
T  561655 actgaaacca 561664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 35679980 - 35679773
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||||||||||||||||    
T  35679980 gttactaggttgagtcatggc-aggtcgctctctttaagacgtttcgtggcactgtcaaaaattgtgcaaggcagactatcaaccacgccgcctccagga 35679882  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| ||||| ||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35679881 t-aaaacaagctcaactacaactgtgcagttaacta-tgcattgtagaaaatcgttcgagaattacaccctcaaatatggtactaagaccactctttaat 35679784  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  35679783 actgaaaccac 35679773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 36942371 - 36942163
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  36942371 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 36942272  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  36942271 t-aaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 36942174  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  36942173 tactgaaacca 36942163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 6155525 - 6155316
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  | || ||| | |||| ||||| ||||||||| ||||||||||||    
T  6155525 gttactaggttgagtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattttacaagacagactatcaaccacaccgcctccagga 6155426  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  6155425 taaaa-caagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaagaccactctttaat 6155327  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  6155326 actgaaaccac 6155316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 10759925 - 10759718
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  10759925 gttactaggttgagtcacgaccaggtcgctct-tttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 10759827  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||||||  | |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  10759826 taaaa-caagcccatttacaactgtgcggttaacta-tgcacggtagaaaaccgttcgagaattataccctcaaatatggtactaagaccactctgtcat 10759729  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  10759728 actgaaaccac 10759718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12502005 - 12501796
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || || |||||||||  ||||| ||||||||||||||||||||||    
T  12502005 gttactaggttgagtcatgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcctccagga 12501906  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||| ||||||||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||| ||||||    
T  12501905 t-aaaacaagcccagctacaactgttcggttaactactgcactgtagaaaatcgttcgagaattacacctccaaatatgatactaagaccactatttaat 12501807  T
Q  222 actgaaaccac 232  Q
    || ||||||||    
T  12501806 accgaaaccac 12501796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 36428698 - 36428907
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || ||| || || |||||||||||||||| ||||||||||||||||||||||    
T  36428698 gttactaggttgagtcacgaccaggtcgctctctttaagacgttttgcggaactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 36428797  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||| || |||||||||||||||||||||| || ||||||||||||||  |||||||||| ||||||||||||||||||    
T  36428798 t-aaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgctcgagaattacacctccaaatatggttctaagaccactctttaat 36428896  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  36428897 actgaaaccac 36428907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 36937617 - 36937409
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  36937617 gttattaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 36937518  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  36937517 t-aaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 36937420  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  36937419 tactgaaacca 36937409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 41587266 - 41587059
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||    || |||||||||| ||||| ||||||||||||||||||||||    
T  41587266 gttactagtttgagtcacgaccaggttgctctctttaagacgtttcgtgacactgttcaaaattgtgcaagacagactatcaaccacgccgcctccagga 41587167  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||     
T  41587166 taaaa-caagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcga--attacaccctcaaatatggtactaagaccactctttaac 41587070  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  41587069 actgaaaccac 41587059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 3665921 - 3666129
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| || || |||||||||||||||| |||||||||||| |||| ||||    
T  3665921 gttactaggttgagtcacgactaggtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctctagga 3666020  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| ||||||| |||||    
T  3666021 t-aaaacaagtccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgggaattacaccttc-aatatggtactaataccactcttttaa 3666118  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  3666119 tactgaaacca 3666129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 30 - 231
Target Start/End: Complemental strand, 32461647 - 32461447
Alignment:
Q  30 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaaca 129  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| || || |||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  32461647 gttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggat-aaaaca 32461549  T
Q  130 agcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaa 228  Q
    ||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||| ||||||    
T  32461548 agttcagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatgctgaaa 32461450  T
Q  229 cca 231  Q
    |||    
T  32461449 cca 32461447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 12045245 - 12045037
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || |||||||||| ||||| ||| ||||||||||||||||||    
T  12045245 gttactaggttgagtcacgaccaggtcgccctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccagga 12045146  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||||  | || ||||||||||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  12045145 t-aaaacaagcatagctacaactgtgcggttaactactgcactgtagactaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaa 12045048  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  12045047 tactgaaacca 12045037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 36423626 - 36423835
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||| || || |||||||||||||||| |||||||||||||||||||| |    
T  36423626 gttactaggttgagtcgcgaccaggtcgctctctttaagacgtttcgcggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaa 36423725  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || | |||||  | ||||||| |||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||    
T  36423726 t-aaaacaagcccagctactactgtttgattaactaatgcactgtagaaaatcgttcgagaattacacctccaaatatggtgctaagaccactctttaat 36423824  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  36423825 actgaaaccac 36423835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 41996654 - 41996857
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||| ||| ||||| ||||||||||||||||||||||    
T  41996654 gttactaggttgagtcacgaccaggttgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccagga 41996753  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||||||||| |||||||||||||||||     ||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  41996754 t-aaaacaagcccaactacaactgtgcggttaact-----actgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 41996846  T
Q  221 tactgaaacca 231  Q
     ||||||||||    
T  41996847 cactgaaacca 41996857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 42001423 - 42001626
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||| ||||| ||||||||||||||||||||||    
T  42001423 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccagga 42001522  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||||||| || |||||||||||||||||     ||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  42001523 t-aaaacaagcccagctacaactgtgcggttaact-----actgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 42001615  T
Q  221 tactgaaacca 231  Q
     ||||||||||    
T  42001616 cactgaaacca 42001626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 6514707 - 6514497
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| || || ||| |||||||||||| ||||||||||||||||||||||    
T  6514707 gttactaggttgagtcacgaccaagtcactctctttaagacgtttcgtggcactgcccaaaattttgcaaggcagactatcaaccacgccgcctccagga 6514608  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||||  | || |||||||| |||||||||||||| ||||||||| | ||||||| ||||||| |||||||||||||||| ||||||| |||||    
T  6514607 t-aaaacaagcttagctacaactgtgtggttaactactgcattgtagaaaatcattcgagatttacaccttcaaatatggtactaaaaccactcttttaa 6514509  T
Q  221 tactgaaaccac 232  Q
    || |||||||||    
T  6514508 tattgaaaccac 6514497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 20181169 - 20180960
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| |  | || ||| |||||| ||||| || ||||||||| |||||| ||    
T  20181169 gttattaggttgagtcacgaccaggtcactctctttaagacgtttcgtggcattgtccaaaattatgcaagacagactattaaccacgccacctccatga 20181070  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  20181069 taaaa-caagctcaactacaattgtgcggttaactactgcactgtagaaaactgttcgagatttacaccctcaaatatgataccaagaccactctttaat 20180971  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  20180970 attgaaaccac 20180960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 40147884 - 40148093
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| |||||||||||| || ||||||||||||||||||| ||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  40147884 gttattaggttgagtcatgatcaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 40147983  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    |||||  |||| || || ||| ||| |  ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  40147984 taaaat-aagctcagcttcaattgttcaattaactactacactgtagaaaaccgttcgagaattacacctccaaatatggtactacgaccactctttaat 40148082  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  40148083 actgaaaccac 40148093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12102937 - 12102727
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||  | || ||||||||||| |||| ||||||||| ||| | ||||||    
T  12102937 gttactaggttgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattgtgcaaggaagactatcaaccacaccgtcaccagga 12102838  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatg----gtactaagaccactctt 217  Q
    | |||||||| |||||| |||||||||||||||||||| |   ||||||||||||| | || || ||||||||||||||    |||||||||||||||||    
T  12102837 t-aaaacaagaccaactacaactgtgcggttaactactac---gtagaaaaccgtttgggattttcaccctcaaatatggtatgtactaagaccactctt 12102742  T
Q  218 taatactgaaaccac 232  Q
    |||||||||||||||    
T  12102741 taatactgaaaccac 12102727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12042040 - 12041829
Alignment:
Q  22 gttactaggt--tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccag 119  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| || || | | ||||||||| || ||||||||||||||||||||    
T  12042040 gttactaggtcatgagtcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgcctccag 12041941  T
Q  120 gataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-ttt 218  Q
    ||| |||||||| ||| || ||||||| || |||||||||||||| || ||||| |||||||||||||| |||| |||||||||| |||  || || |||    
T  12041940 gat-aaaacaagtccagctacaactgttcgattaactactgcactataaaaaactgttcgagaattaca-cctccaatatggtaccaagtacattctttt 12041843  T
Q  219 aatactgaaaccac 232  Q
    ||||||||||||||    
T  12041842 aatactgaaaccac 12041829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 40 - 232
Target Start/End: Complemental strand, 11981366 - 11981177
Alignment:
Q  40 gaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactg 139  Q
    |||||||||||| |||||||||||||| |||||||| || || |||||||||| ||||  |||||||||||||||||||| |||||| ||||| || ||     
T  11981366 gaccaggtcgctttctttaagacgttttgtggcactgcccaaaattgtgcaagacaga--atcaaccacgccgcctccagaataaaa-caagcacatcta 11981270  T
Q  140 caactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaaccac 232  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||| || |||||||| ||||||||    
T  11981269 caactgttcgattaactattgcactgtagaaaaccgttcgagaattaca-cctctaatatggtaccaagaccattcttttaataccgaaaccac 11981177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 15414987 - 15414787
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||| |||||||||||||| ||  ||||||||||||| ||||| |||||||| || || ||||||  |||||||  ||||||||||||||||||||||    
T  15414987 gttacttggttgagtcacgactagaacgctctctttaagtcgttttgtggcactgcccaaaattgtgtgaggcagaatatcaaccacgccgcctccagga 15414888  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    |||   |||| |||  || || ||||||||||||||||||||| ||||||||| ||||| | ||||| |||| |||||| ||||||||||| ||||||||    
T  15414887 taatg-caagtccacatgtaaatgtgcggttaactactgcactatagaaaacctttcgaaatttaca-cctccaatatgctactaagaccaatctttaat 15414790  T
Q  222 act 224  Q
    |||    
T  15414789 act 15414787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 230
Target Start/End: Complemental strand, 16116351 - 16116151
Alignment:
Q  26 ctaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaa 125  Q
    ||||||| ||||||||| |||| |||||| |||| |||||||||| |||| || || |||||||||| || || |||||||||||| |||||  ||| ||    
T  16116351 ctaggttaagtcacgactaggttgctctccttaaaacgtttcgtgacactgcccaaaattgtgcaagacaaactatcaaccacgccacctcctagat-aa 16116253  T
Q  126 aacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactg 225  Q
    ||||||  ||||| |||| || | ||||||||||||||| ||||||||||||||||||||||| | || |||||| |||||  | |||||||||||||||    
T  16116252 aacaagttcaactacaacagtactgttaactactgcactatagaaaaccgttcgagaattaca-catccaatatgatacta--atcactctttaatactg 16116156  T
Q  226 aaacc 230  Q
    |||||    
T  16116155 aaacc 16116151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 37652936 - 37652832
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||| || |  | || |||||||||||||||| |||||||||||| |||||||||    
T  37652936 gttattaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacattgtccaaaattgtgcaaggcagactatcaaccacgccacctccagga 37652837  T
Q  122 taaaa 126  Q
    |||||    
T  37652836 taaaa 37652832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 13582785 - 13582692
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||| | ||||||||||| |||||||||||||    
T  13582785 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaat-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 13582692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 4871989 - 4872120
Alignment:
Q  100 atcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatat 199  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||||||| || |||||||||| |||||||||||||||| |||||||| ||| || |||||    
T  4871989 atcaaccacgccgcctccatgataaaa-caagctcaactacaactgttcgattaactactgtactgtagaaaaccgtttgagaattataccttc-aatat 4872086  T
Q  200 ggtactaagaccactc-tttaatactgaaaccac 232  Q
    ||||| ||||||| || ||||||| |||||||||    
T  4872087 ggtacaaagaccattcttttaataatgaaaccac 4872120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 24435964 - 24435871
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | ||  |||||||||| |||| ||||||||||||| |||||||||||||    
T  24435964 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatccaa-gttgtgcaaggtagactatcaaccacgccgtctccaggataaaa 24435871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 7805068 - 7805164
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  7805068 ggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 7805164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 14374132 - 14374228
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||| || |||| | ||||||||||| |||||||||||||    
T  14374132 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcagggtagactaacaaccacgccgtctccaggataaaa 14374228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 9726676 - 9726586
Alignment:
Q  140 caactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||| | | |||||||||| |||||||| ||||||||||||||||||    
T  9726676 caactgtgcggttaactactgcactgtagaaaaccgttcaaggtttaca-ctttaaatatggtattaagaccattctttaatactgaaacca 9726586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 36253826 - 36253919
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| |||||||||||||||||||    
T  36253826 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgcctccaggataaaa 36253919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 17510058 - 17510151
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  17510058 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 17510151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 34707513 - 34707439
Alignment:
Q  153 aactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaa 228  Q
    ||||| |||||  ||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  34707513 aactattgcaccatagaaaaccgttcgagatttacacctt-aaatatggtactaagaccactctttaatactgaaa 34707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 13301585 - 13301381
Alignment:
Q  28 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaa 127  Q
    |||||||||||||||||||||||| ||||||||||   ||  ||||||||| || ||||||||||| |||| | |||||  |  |||||||||||||||     
T  13301585 aggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccaaaattgtgcaaggtagactaacaaccgtgt-gcctccaggataaaac 13301487  T
Q  128 caagcccaactgcaactgtgcggttaactactgcact---gtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatac 223  Q
      ||||| | | || |||| || |||| ||||||||    ||| |  | ||||| |||| || ||||||| |||||||||||||||||||||||||||||    
T  13301486 --agccccagttcacctgttcgattaaatactgcaccaccgtatatgatcgttcaagaaataacaccctctaatatggtactaagaccactctttaatac 13301389  T
Q  224 tgaaacca 231  Q
    ||||||||    
T  13301388 tgaaacca 13301381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 24771452 - 24771359
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  24771452 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaa-gttgtgcaaggtagactaacaaccgcgccgtctccaggataaaa 24771359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 28857858 - 28857956
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctcttt-aagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |||||||||  |  |||||||||| |||| | |||||||||||||| ||||||||||    
T  28857858 ggttgagtcacgaccaagtcgctttcttttaagacgtttcgcggcactacctgagtttgtgcaaggtagaccaacaaccacgccgcctacaggataaaa 28857956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 42019573 - 42019666
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | |||||  |||| |||||||||||||    
T  42019573 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgtgccgtctccaggataaaa 42019666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 228
Target Start/End: Original strand, 9911142 - 9911344
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||| | ||| | |||| ||| |||||||| ||| ||||||||    || |||||||  ||||||| | ||| ||||||| ||| | ||    
T  9911142 gttactaggttgagttaggacaatgtcgttctttttaagacattttgtggcactgttcaaaattgtgcggggcagactaccaatcacgccg-ctctaaga 9911240  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||  ||||| ||| ||||||||||| ||||||||||||||||||||||| | |   |||   | |||||||||||||||||||||| |||||    
T  9911241 t-aaaacaagttcaactacaattgtgcggttaattactgcactgtagaaaaccgttcaaaagacaca---ttaaatatggtactaagaccactcttttaa 9911336  T
Q  221 tactgaaa 228  Q
    ||||||||    
T  9911337 tactgaaa 9911344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 1414155 - 1414053
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    ||||| || |||||||||| ||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| ||||| |||    
T  1414155 ttactggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaagat 1414057  T
Q  123 aaaa 126  Q
    ||||    
T  1414056 aaaa 1414053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 26709102 - 26709197
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc-aaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||||  ||||||||| |||| | ||||| || |  |||||||||||||    
T  26709102 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgtcatctccaggataaaa 26709197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 26978836 - 26978931
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc-aaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||||  ||||||||| |||| | ||||| || |  |||||||||||||    
T  26978836 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgtcatctccaggataaaa 26978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 17504953 - 17505046
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| || || |||||||||||||    
T  17504953 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgtcgtctccaggataaaa 17505046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 41858593 - 41858686
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||| ||||||||| |||||||||||||||  ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  41858593 tgagtcacgatcaggtcgctttctttaagacgtttcacggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 41858686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 21324064 - 21323865
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaac 128  Q
    |||||||||| |||||||||||| ||||||||||   ||  ||||||| |  | ||||||||||| |||| | |||||  |  |||||||||||||||      
T  21324064 ggttgagtcatgaccaggtcgctttctttaagacaaatcacggcactatccgaaattgtgcaaggtagactaacaaccgtgt-gcctccaggataaaac- 21323967  T
Q  129 aagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaa 227  Q
     ||||||  | || |||| || |||| |||||||| ||| |  | |||||||||| || ||||||| |||||||||||||||||| ||||||||||||||    
T  21323966 -agcccagtt-cacctgttcgattaaatactgcaccgtatatgatcgttcgagaaataacaccctctaatatggtactaagaccagtctttaatactgaa 21323869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 231
Target Start/End: Original strand, 31731540 - 31731739
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaac 128  Q
    ||||||||||||||||||||||| ||||||||||   ||  |||||||||  | ||||||||||| |||| | |||||  |  |||||||||||||||      
T  31731540 ggttgagtcacgaccaggtcgctttctttaagacaaatcagggcactacccgaaattgtgcaaggtagactaacaaccgtgt-gcctccaggataaaac- 31731637  T
Q  129 aagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaa 227  Q
     ||||||  | || |||| || |||| |||||||| ||| |  | |||||||||| || ||||||| |||||||||| ||||| ||||||||||||| ||    
T  31731638 -agcccagtt-cacctgttcgattaaatactgcaccgtatatgatcgttcgagaaataacaccctctaatatggtaccaagactactctttaatacttaa 31731735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 1429938 - 1429893
Alignment:
Q  186 acaccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  1429938 acaccctcaaatatggtactaagaccattctttaatattgaaacca 1429893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 24776919 - 24776814
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaacc---acgccgcctccag 119  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | |||||    ||||| ||||||    
T  24776919 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcggcgccgtctccag 24776821  T
Q  120 gataaaa 126  Q
    |||||||    
T  24776820 gataaaa 24776814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 37550077 - 37550034
Alignment:
Q  83 attgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  37550077 attgtgcaaggcagactatcaaccacgccacctccaggataaaa 37550034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 41853548 - 41853594
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc 78  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||    
T  41853548 tgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacc 41853594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 18265588 - 18265507
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||| ||| |||| || || |||||||||  ||||| |||||||||| || | ||| |||||||    
T  18265588 aggtcgctctctttaagacgttttgtgacactgcctaaaattgtgcaa-tcagactatcaaccacgacgtccccatgataaaa 18265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 31986723 - 31986772
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc 78  Q
    |||||||||||||  |||||||| |||||||||||||||| | |||||||    
T  31986723 ggttgagtcacgataaggtcgctttctttaagacgtttcgcgacactacc 31986772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 7093 - 7304
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  7093 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 7192  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  7193 t-aaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacgccctcaaatattgtattaagaccactctttaat 7291  T
Q  222 actgaaaccacct 234  Q
    |||||||||||||    
T  7292 actgaaaccacct 7304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 1807461 - 1807676
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| || || |||||||||||||||| ||||||||||||||||| ||||    
T  1807461 gttactaggttgagtcacgactaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctctagga 1807560  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    |||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  1807561 taaaaacaagtccagctacaactgtgcggttaactagtgcactgtagaaaaccgttcgagatttacaccttcaaatatggtactaagatcactctttaat 1807660  T
Q  222 actgaaaccacctatg 237  Q
    ||||||||||||||||    
T  1807661 actgaaaccacctatg 1807676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 31449972 - 31449764
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  31449972 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 31449873  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  31449872 t-aaaacaagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaa 31449775  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  31449774 tactgaaacca 31449764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 33416536 - 33416744
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||| ||    
T  33416536 gttactaggttgagtcacgaccaggtcggtctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaaga 33416635  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  33416636 t-aaaacaagcccagctacaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatacggtactaagaccgctctttaat 33416733  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  33416734 actgaaaccac 33416744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 44926029 - 44925821
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  44926029 gttactaggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 44925930  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||  || || ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44925929 t-aaaacaaggtcatctacaactatgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaaaaccactctttaat 44925832  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  44925831 actgaaaccac 44925821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 22 - 234
Target Start/End: Complemental strand, 18876472 - 18876262
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  18876472 gttactaggttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 18876374  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||| | || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  18876373 taaaa-caaactcatctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgatactaataccactctttaat 18876275  T
Q  222 actgaaaccacct 234  Q
    | |||||||||||    
T  18876274 attgaaaccacct 18876262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 40125991 - 40125782
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||| ||    
T  40125991 gttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaaga 40125892  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||| || ||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  40125891 t-aaaacaagcccagctacaactgttcgattaactactgcaccgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 40125793  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  40125792 actgaaaccac 40125782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 19166623 - 19166820
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || |||||||| ||||||| ||||||||||||||||||||||    
T  19166623 gttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaaccacgccgcctccagga 19166722  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaa 220  Q
    | ||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  19166723 t-aaaacaagctcaactacaactgtgctgttaactactgcactatagaaaaccgttcgagaattacaccctcaaatatggtactaagatcattctttaa 19166820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 228
Target Start/End: Original strand, 36683568 - 36683773
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || || |||||| ||||||||| ||||||||||| ||||||||||    
T  36683568 gttactaggttgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactatcaaccacgctgcctccagga 36683667  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||  || || || ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  36683668 taaaa-caaggtcagctacatctgtgcgattaactactgcactgtagaaaatcgtttgagaattacaccctcaaatatggtactaagaccactctttaat 36683766  T
Q  222 actgaaa 228  Q
    |||||||    
T  36683767 actgaaa 36683773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 1911075 - 1910866
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||   || ||||||||| |||||| ||||||||||| |||||||| |    
T  1911075 gttattaggttaagtcacgatcaggtcgctctctttaagacgtttcgtggcactagtcaaaattgtgcaaagcagactatcaaccacgctgcctccagta 1910976  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||||||||||| |||||||||||||||||    
T  1910975 taaaa-caagctcaactacaactgtgcggttaactactgcactgtagaaaaccattcgagatttacacattcaaatatggtattaagaccactctttaat 1910877  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  1910876 actgaaaccac 1910866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 34118455 - 34118664
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| |||||||||| |||||  ||||    
T  34118455 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgtcgcctttagga 34118554  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||||| |||||||||||||| ||||||||| |||||||| ||||||| || |||||||||||||| ||||||||||||    
T  34118555 t-aaaacaagcccagctacaactgtgctgttaactactgcaccgtagaaaactgttcgagatttacaccttcgaatatggtactaaggccactctttaat 34118653  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  34118654 aatgaaaccac 34118664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 2965620 - 2965825
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || || |||||||||| || || ||||||||| ||||||| ||||    
T  2965620 gttactaggt-gagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcctaaaattgtgcaagacacactatcaaccacaccgcctctagga 2965718  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| || ||||| ||| ||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  2965719 taaaa-caagtccagctacaactatgcagttaactactgcactgtagaaaaccatttgagatttacaccctcaaatatggtactaagaccactctttaat 2965817  T
Q  222 actgaaac 229  Q
    ||| ||||    
T  2965818 actaaaac 2965825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 17025924 - 17026133
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||| |||| |||||||||||    
T  17025924 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccagga 17026023  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| | | || ||||||| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| || |||||    
T  17026024 t-aaaacaagtctagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattaca-cctccaatatggtaccaagaccattcttttaa 17026121  T
Q  221 tactgaaaccac 232  Q
    || |||||||||    
T  17026122 tattgaaaccac 17026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 17556416 - 17556625
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||| ||||| |||| |||||||||||    
T  17556416 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccagga 17556515  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| | | || ||||||| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| || |||||    
T  17556516 t-aaaacaagtctagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattaca-cctccaatatggtaccaagaccattcttttaa 17556613  T
Q  221 tactgaaaccac 232  Q
    || |||||||||    
T  17556614 tattgaaaccac 17556625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 38182337 - 38182152
Alignment:
Q  28 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaa 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || || |||||||||||||||  ||||||||||||||||||||||| ||||    
T  38182337 aggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcacttcccaagattgtgcaaggcagattatcaaccacgccgcctccaggat-aaaa 38182239  T
Q  128 caagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccact 214  Q
    ||||| || || ||||||||| ||||||||||||||| || |||||||||||||| ||||||| |||||||||||||||| ||||||    
T  38182238 caagcacagctacaactgtgctgttaactactgcactataaaaaaccgttcgagatttacaccttcaaatatggtactaaaaccact 38182152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 24090616 - 24090820
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||  ||||| |||| |||||||| ||    
T  24090616 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatcacgtcgcctccaaga 24090715  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||  | || |||||||||||||||||     | ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  24090716 t-aaaacaagcttatctacaactgtgcggttaact-----attgtagaaaaccgttcgagatttacatcctcaaatattgtactaagaccactctttaat 24090809  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  24090810 attgaaaccac 24090820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 201
Target Start/End: Complemental strand, 15875774 - 15875596
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||  |||||| ||||||||||||||||||||| |||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  15875774 gttactaaattgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 15875675  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
    | ||||||||| || || ||| ||| || |||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  15875674 t-aaaacaagctcagctacaattgtacgattaactactgcactatagaaaaccgttcaagaattacactctcaaatatgg 15875596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 201
Target Start/End: Complemental strand, 17953979 - 17953800
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| || || |||||||||| ||||  ||||||||||||||||||| ||    
T  17953979 gttactaggttgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccacgccgcctccaaga 17953880  T
Q  122 taaaaacaagcccaactgc-aactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
    | ||||||||| || || | ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17953879 t-aaaacaagctcacctacaaactgtgtgattaactactgcactgtagaaaatcgttcgagaattacaccctcaaatatgg 17953800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 23548738 - 23548542
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    || |||||||||||| ||| |||||||||| |||||| ||||    
T  23548738 gttactaggttgagtcacgacctggtcgctctctataagacgtttcgtggcactgtgtaaaattgtgcaaggcggactatcaaccacgtcgcctctagga 23548639  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttta 219  Q
    ||||| ||||  || || |||||| |||||||||||||||| ||||||||||||||| ||| || |||||| ||||||| ||||||||||||| ||||    
T  23548638 taaaa-caagttcagctacaactgcgcggttaactactgcattgtagaaaaccgttcaagattttcacccttaaatatgatactaagaccactattta 23548542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 28559760 - 28559570
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||||||  | || ||||||||||||| || ||||||||||||| || |||||    
T  28559760 gttactaggttgagtcacgacaatgtcgctctctataagacgtttcgtggcactgtccaaaattgtgcaaggcaaactatcaaccacgccgtctgcagga 28559661  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccact 214  Q
    | |||| |||||||  |  |||||| || ||||||| ||||||||| |||||||||||||||||||||| || |||| |||| ||||||||||    
T  28559660 t-aaaataagcccagttagaactgttcgattaactattgcactgtaaaaaaccgttcgagaattacaccttc-aatacggtagtaagaccact 28559570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 28564927 - 28564717
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || |||| |  || ||||| |||| ||||| || |||||||||| || |||||    
T  28564927 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccgtctgcagga 28564828  T
Q  122 ta-aaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaa 220  Q
    || |||||||||||   |  |||||| || ||||||| |||| ||||||||||||||||||||||||||| || |||||| || ||||||||||||||||    
T  28564827 tataaaacaagcccggttagaactgttcgattaactattgcagtgtagaaaaccgttcgagaattacaccttc-aatatgatagtaagaccactctttaa 28564729  T
Q  221 tactgaaaccac 232  Q
    |  |||||||||    
T  28564728 tgttgaaaccac 28564717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 28572550 - 28572340
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || |||| |  || ||||| |||| ||||| || |||||||||| || |||||    
T  28572550 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccgtctgcagga 28572451  T
Q  122 ta-aaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaa 220  Q
    || |||||||||||   |  |||||| || ||||||| |||| ||||||||||||||||||||||||||| || |||||| || ||||||||||||||||    
T  28572450 tataaaacaagcccggttagaactgttcgattaactattgcagtgtagaaaaccgttcgagaattacaccttc-aatatgatagtaagaccactctttaa 28572352  T
Q  221 tactgaaaccac 232  Q
    |  |||||||||    
T  28572351 tgttgaaaccac 28572340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 43302714 - 43302589
Alignment:
Q  105 ccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtac 204  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || ||| ||||||    
T  43302714 ccacgccgcctccaggataaaa-caagcccagctgcacctgtgcggttaactactgcactgtagaaaatcgttcgagaattacaccttc-aatgtggtac 43302617  T
Q  205 taagaccactc-tttaatactgaaacca 231  Q
    |||||| |||| ||||||| ||||||||    
T  43302616 taagactactcttttaatattgaaacca 43302589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 15951583 - 15951456
Alignment:
Q  100 atcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcact--gtagaaaaccgttcgagaattacaccctcaaat 197  Q
    |||||||||||||||||||| |||||| |||||||| || ||||||||| |||||||||||||||  |||||||||||||||||| ||||||  || | |    
T  15951583 atcaaccacgccgcctccag-ataaaa-caagcccagctacaactgtgcagttaactactgcactctgtagaaaaccgttcgagatttacacgttcga-t 15951487  T
Q  198 atggtactaagaccactctttaatactgaaa 228  Q
    |||||||||||||||||||||||||||||||    
T  15951486 atggtactaagaccactctttaatactgaaa 15951456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 43302825 - 43302712
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcacta-ccaaatattgtgcaaggcagacaatcaaccacgccgcctccagg 120  Q
    |||| |||| ||||| |||||| ||||| |||||||||||||||||||||||||  ||||| ||||||||||| |||| |||||||||||||||||||||    
T  43302825 gttattaggctgagttacgacccggtcgttctctttaagacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcctccagg 43302726  T
Q  121 ataaaaacaagccca 135  Q
    || ||||||||||||    
T  43302725 at-aaaacaagccca 43302712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 4238330 - 4238239
Alignment:
Q  140 caactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaacca 231  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || ||||||||||||||||    
T  4238330 caactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaatactgaaacca 4238239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 4238421 - 4238337
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaacc 106  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || || |||||||||||||||| |||||||    
T  4238421 gttactaggttgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 4243069 - 4242978
Alignment:
Q  140 caactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaacca 231  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || ||||||||||||||||    
T  4243069 caactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccaatcttttaatactgaaacca 4242978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 4243160 - 4243076
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaacc 106  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || || |||||||||||||||| |||||||    
T  4243160 gttactaggttgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4243076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 33616823 - 33616729
Alignment:
Q  31 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  33616823 ttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 33616729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 32015700 - 32015793
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  32015700 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 32015793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 40130792 - 40130722
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaag 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||    
T  40130792 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag 40130722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 19430011 - 19430107
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| ||| |||||||||    
T  19430011 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctctaggataaaa 19430107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 19435513 - 19435609
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| ||| |||||||||    
T  19435513 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctctaggataaaa 19435609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 19566160 - 19566256
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| ||| |||||||||    
T  19566160 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctctaggataaaa 19566256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 19571662 - 19571758
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| ||| |||||||||    
T  19571662 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctctaggataaaa 19571758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 31030525 - 31030621
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||| || ||| ||||||| |||| | ||||||||||| |||||||||||||    
T  31030525 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactacccaa-attatgcaaggtagactaacaaccacgccgtctccaggataaaa 31030621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 17955884 - 17955791
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||| || ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  17955884 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 17955791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 24884712 - 24884808
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaaca 129  Q
    |||||||||||||||| ||| |||||||||||||| | ||||||||| ||  |||||||||| |||| | ||||||||||| ||||||||||||||||    
T  24884712 tgagtcacgaccaggtagctttctttaagacgttttgcggcactacctaa-gttgtgcaaggtagactagcaaccacgccgtctccaggataaaaaca 24884808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 21644172 - 21644083
Alignment:
Q  36 tcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  21644172 tcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgactccaggataaaa 21644083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 42514469 - 42514376
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  42514469 tgagtcatgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 42514376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 200
Target Start/End: Original strand, 7902561 - 7902729
Alignment:
Q  31 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaa 130  Q
    |||||||||||||| |||||||||||||| | |||||||| || |||| || |||||  ||| || |  ||||||||||||| ||| ||||| |||||||    
T  7902561 ttgagtcacgaccaagtcgctctctttaaaatgtttcgtgacattacccaaaattgtataagacatattatcaaccacgccgtctctaggat-aaaacaa 7902659  T
Q  131 gcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatg 200  Q
    | ||| |  ||| |||||| ||||||||| |||||||   |||  ||||||||||||| | |||||||||    
T  7902660 gtccatcaacaattgtgcgattaactactacactgtatctaactattcgagaattacaacttcaaatatg 7902729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 13584341 - 13584451
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaa-------atattgtgcaaggcagacaatcaaccacgccgcct 115  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||| |       |  |||||||||| |||| | ||||||||||| ||    
T  13584341 ttaccaggttgaatcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttcccaagttgtgcaaggtagactaacaaccacgccgtct 13584440  T
Q  116 ccaggataaaa 126  Q
    |||||||||||    
T  13584441 ccaggataaaa 13584451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 43999334 - 43999232
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    ||||| ||||||||||||| ||||||| | ||||||| |||||||| ||||||||| || ||||||||||| |||| | ||||  ||||| |||||||||    
T  43999334 ttactgggttgagtcacgatcaggtcgttttctttaaaacgtttcgcggcactacctaa-attgtgcaaggtagactagcaactgcgccgtctccaggat 43999236  T
Q  123 aaaa 126  Q
    ||||    
T  43999235 aaaa 43999232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 17020470 - 17020536
Alignment:
Q  166 tagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    |||||||||||| |||| ||||||  || |||||||||||||||||||||||||||| |||||||||    
T  17020470 tagaaaaccgtttgagatttacacattcgaatatggtactaagaccactctttaatattgaaaccac 17020536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 17550907 - 17550973
Alignment:
Q  166 tagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    |||||||||||| |||| ||||||  || |||||||||||||||||||||||||||| |||||||||    
T  17550907 tagaaaaccgtttgagatttacacattcgaatatggtactaagaccactctttaatattgaaaccac 17550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 34818656 - 34818598
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  34818656 cgttcgagaaataacaccctctaatatggtactaagaccactctttaatactgaaacca 34818598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 231
Target Start/End: Original strand, 37771703 - 37771907
Alignment:
Q  24 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggata 123  Q
    |||| ||||||||||||||||||||||| ||||||||||   ||  |||||||||  | |||||| |||| |||| | |||||  |  ||||||||||||    
T  37771703 tactgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgaaaggtagactaacaaccgtgt-gcctccaggata 37771801  T
Q  124 aaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaata 222  Q
    ||| ||| ||  | | || |||| || |||| ||| |||||||| |  | |||||||||| || ||||||| |||||||||| ||||| |||||||||||    
T  37771802 aaa-caaccc--agttcacctgttcgattaaatacggcactgtatatgatcgttcgagaaataacaccctctaatatggtaccaagactactctttaata 37771898  T
Q  223 ctgaaacca 231  Q
    |||||||||    
T  37771899 ctgaaacca 37771907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 2355565 - 2355461
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||||||| ||||  || |||| |||||||||||||||| ||||    || |||||||||| ||||| ||||||||||||||||| | ||    
T  2355565 gttactagattgagtcaccaccatatcactctttttaagacgtttcgtgacacttttcaaaattgtgcaagacagactatcaaccacgccgcctcaaaga 2355466  T
Q  122 taaaa 126  Q
    |||||    
T  2355465 taaaa 2355461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 10933499 - 10933592
Alignment:
Q  100 atcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaa 195  Q
    |||||||||| |||||||| |||||||  ||  |||||| |||||||| | ||||||||||||||||||| ||  |||||||||||||||| ||||    
T  10933499 atcaaccacgtcgcctccatgataaaacaaa--ccaactacaactgtgtgattaactactgcactgtagagaattgttcgagaattacaccttcaa 10933592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 8331301 - 8331258
Alignment:
Q  186 acaccctcaaatatggtactaagaccactctttaatactgaaac 229  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  8331301 acaccctctaatatggtactaagaccactctttaatactgaaac 8331258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 12820370 - 12820472
Alignment:
Q  64 tttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcac 163  Q
    |||||||||||| || || ||||||||| ||| || ||||| ||| ||||||||||||| ||||||||  ||  | ||||||||||  ||||||||||||    
T  12820370 tttcgtggcactgcctaaaattgtgcaaagcaaactatcaatcacaccgcctccaggat-aaaacaagttcaggtacaactgtgcgactaactactgcac 12820468  T
Q  164 tgta 167  Q
    ||||    
T  12820469 tgta 12820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 19954262 - 19954348
Alignment:
Q  23 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacg 109  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| |||||||| || || ||||| ||| |||||| ||||||||||    
T  19954262 ttactaggttgagtcgcagactagatcgctctctttaagacgttttgtggcactgcccaaaattgtacaa-gcagactatcaaccacg 19954348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 25367937 - 25367882
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaa 228  Q
    |||||||||| || ||||||| |||||||||||||| |||||||||||||||||||    
T  25367937 cgttcgagaaataacaccctctaatatggtactaagtccactctttaatactgaaa 25367882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 2469986 - 2470067
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||| |||||||| |  || ||||||||| |||||| |||||| ||| || | |||||||||||    
T  2469986 aggtcgctctctttaagacgttttgtggcactgctcaaaattgtgcaa-gcagactatcaactacgacgtccccaggataaaa 2470067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 4544356 - 4544286
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaag 92  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||||| |  || ||||||||||    
T  4544356 ttactaggctgagtcacggactaggtcgctctctttaagacgtttcatggcactgctcaaaattgtgcaag 4544286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 15951618 - 15951584
Alignment:
Q  31 ttgagtcacgaccaggtcgctctctttaagacgtt 65  Q
    |||||||||||||||||||||||||||||||||||    
T  15951618 ttgagtcacgaccaggtcgctctctttaagacgtt 15951584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 29220255 - 29220357
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact-accaaatattgtgcaaggcagacaatcaaccacgccgcctccagg 120  Q
    |||| ||||||||||||||||  |||| ||||  ||||||||||| ||| |||| | |||| ||||||||||| |||| ||||||||||| ||||| |||    
T  29220255 gttagtaggttgagtcacgactgggtcactct--ttaagacgttttgtgtcactgatcaaa-attgtgcaaggtagactatcaaccacgctgcctcaagg 29220351  T
Q  121 ataaaa 126  Q
    ||||||    
T  29220352 ataaaa 29220357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 32010538 - 32010584
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc 78  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||||    
T  32010538 tgagtcacgaccaggtcgctctttttaagacatttcgcggcactacc 32010584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 19949808 - 19949892
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaacca 107  Q
    |||||||| ||||||||| || | |||||||||||||||| ||||||||||||| || || |||| |||| |||||| ||||||||    
T  19949808 ttactaggctgagtcacggactacgtcgctctctttaagaagtttcgtggcactgcccaaaattgagcaa-gcagactatcaacca 19949892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 232
Target Start/End: Complemental strand, 24673320 - 24673231
Alignment:
Q  140 caactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    |||||||||||||||| ||| ||||||| || |  |||| ||| ||||||| || |||||||||||||||||||| ||||||  |||||||||    
T  24673320 caactgtgcggttaaccactacactgtaaaaga--gttcaagatttacacc-tccaatatggtactaagaccactttttaatgttgaaaccac 24673231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 29220373 - 29220494
Alignment:
Q  68 gtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgta 167  Q
    ||||||||||  || ||| |||||| ||||| |||||| ||| | |||||||| ||||||||||| ||||||||||| || |  |||||| |||| ||||    
T  29220373 gtggcactacacaaaattatgcaagacagactatcaactacgtcacctccagggtaaaaacaagcacaactgcaactatgtgactaactaatgcattgta 29220472  T
Q  168 gaaaaccgttcgagaattacac 189  Q
       ||  |||||||||||||||    
T  29220473 cctaattgttcgagaattacac 29220494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 34517263 - 34517333
Alignment:
Q  54 ctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||  |||| ||||||||||| |||| |||||||||| |||| ||| |||||||    
T  34517263 ctttaagacgtttcgtggcactgtcaaa-attgtgcaagg-agactatcaaccacgacgcccccaagataaaa 34517333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 34818802 - 34818764
Alignment:
Q  24 tactaggttgagtcacgaccaggtcgctctctttaagac 62  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  34818802 tactgggttgagtcacgaccaggtcgctttctttaagac 34818764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 24673431 - 24673378
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 75  Q
    ||||||||||||||| |||| ||| ||||||| ||||| |||||||||| ||||    
T  24673431 gttactaggttgagttacgatcagatcgctctttttaaaacgtttcgtgacact 24673378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 5883989 - 5884036
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtgg 71  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||| ||||    
T  5883989 ttactgggttgagtcacgaccaggtagctct-tttaagacgttttgtgg 5884036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 9993 - 9784
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  9993 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 9894  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  9893 t-aaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaagaccactctataat 9795  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  9794 actgaaaccac 9784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 4063 - 4272
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  4063 gttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 4162  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||| || ||||||| || |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  4163 t-aaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 4261  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  4262 actgaaaccac 4272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 444011 - 443841
Alignment:
Q  60 gacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactact 159  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| ||| ||||||||| |||||||| || |||||||||||||||||| |    
T  444011 gacgtttcgtggcactgccaaa-attgtgcaaggcagactatcaaccacgccgtctc-aggataaaa-caagcccagctacaactgtgcggttaacta-t 443916  T
Q  160 gcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccacct 234  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  443915 gcactatagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaatcacct 443841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 11570855 - 11570646
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||    
T  11570855 gttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccagga 11570756  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| || || |||||||||||| ||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  11570755 t-aaaacaagctcagctacaactgtgcggtgaactactccgctgtagaaaaccgttccagaattataccctcaaatatggtactaagaccactctttaat 11570657  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  11570656 actgaaaccac 11570646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 53 - 232
Target Start/End: Complemental strand, 17964634 - 17964456
Alignment:
Q  53 tctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggtt 152  Q
    |||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  17964634 tctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaa-caagcccagctgcaactgtgcggtt 17964536  T
Q  153 aactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17964535 aactactgcactgtagaaaaccgttcgagaattacaccttcaaatatggtactaagaccactctttaatactgaaaccac 17964456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 6407966 - 6407758
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||| || || ||||| ||| |||||| ||||||||||||||||||||||    
T  6407966 gttactaggttgagtcacgatcaggtcgctctcttgaagacgtttcgtggcactgcccaaaattgtacaaagcagactatcaaccacgccgcctccagga 6407867  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| || || |||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  6407866 t-aaaacaagctcagctacaactgtgcggttaactact-cactgtagaaaaccgttcaagaattacacctccaaatatggtactaagaccactctttaat 6407769  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  6407768 actgaaaccac 6407758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 53 - 237
Target Start/End: Complemental strand, 16836231 - 16836048
Alignment:
Q  53 tctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggtt 152  Q
    ||||||||||||||||||||||| || || ||||| |||||||||| ||||||||||||||||||||||||||| |||||||| || |||||||||||||    
T  16836231 tctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataaaa-caagcccagctacaactgtgcggtt 16836133  T
Q  153 aactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccacctatg 237  Q
    |  ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  16836132 agttactgcactgtagaaaaccgttcgagaattacaccctcatatttggtactaagaccactctttaatactgaaaccacctatg 16836048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 2700212 - 2700004
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    || |||||||||| ||||| |||||||||||||| |||||||    
T  2700212 gttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccacgccgcttccagga 2700113  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||||||||| ||||||| || |||||||||||||||||||||| || ||||||||||||||  ||||||||||||||||| |||||||||||    
T  2700112 t-aaaacaagcccaactacaactgttcgattaactactgcactgtagaaaatcg-tcgagaattacacctccaaatatggtactaagatcactctttaat 2700015  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  2700014 actgaaaccac 2700004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 12688960 - 12689169
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||  ||| || || |||||||||||||||| ||||||||||||| ||||||||    
T  12688960 gttactaggttgagtcatgaccaggtcactctctttaagacgttttgtgatactgcccaaaattgtgcaaggcagactatcaaccacgccgtctccagga 12689059  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||| || || |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||    
T  12689060 taaaa-caagctcagctacaactgtgcggttaactactacactgtagaaaaccgttcgacaattacaccctcaattatggtattaagacgactctttaat 12689158  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  12689159 attgaaaccac 12689169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 8747771 - 8747979
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| || || |||||||||| ||| | |||||| |||||||||||||||    
T  8747771 gttactaggttgagtcacgaccaggtcgctctctttaagacgttccgtgacactgcccaaaattgtgcaagacaggctatcaacaacgccgcctccagga 8747870  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | ||||||||| || |||||||| || |||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||||     
T  8747871 t-aaaacaagctcagctgcaactatgtggttaactactgcactgtagaaaaccgttcgaaaattacaccttc-aatatggtactaagaccactcttttat 8747968  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  8747969 tactgaaacca 8747979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 33687709 - 33687500
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| |||||||||| || |||||||||||||||||||||||||||||||||||  | || |||||||||| ||||| |||||||| |||| ||||||||    
T  33687709 gttattaggttgagttaccaccaggtcgctctctttaagacgtttcgtggcactggccaaaattgtgcaagacagactatcaaccatgccgtctccagga 33687610  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||| | ||||| ||||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||||||||||||| |||||||||||||    
T  33687609 taaaa-caaactcaactacaactgtgcggttaactactgcattgtagaaaatccttcgagatttacaccctcaaatatggtactaaaaccactctttaat 33687511  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  33687510 attgaaaccac 33687500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 24589270 - 24589062
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||| |||||||||||| ||| ||||||||||||| |||||||||| ||||  | || ||||||||||  |||| ||||||||||||| ||||||||    
T  24589270 gttactaagttgagtcacgatcagatcgctctctttaaaacgtttcgtgacactttccaaaattgtgcaagatagactatcaaccacgccgtctccagga 24589171  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    ||||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  24589170 taaaa-caagtccaactacaactgtgcggttaactactgcattgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaa 24589073  T
Q  221 tactgaaacca 231  Q
    |||||||||||    
T  24589072 tactgaaacca 24589062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 228
Target Start/End: Complemental strand, 29892367 - 29892162
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||  ||||||||||||||||||| |||| |||||||| || || |||||||||| || || ||||||||| || |||||||||    
T  29892367 gttactaggttgagtcacggtcaggtcgctctctttaagaagtttggtggcactgcccaaaattgtgcaagacaaactatcaaccacacctcctccagga 29892268  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| || |||||||| ||||||||| |||| ||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||    
T  29892267 taaaa-caagtccagctacaactgtgtggttaactattgcattgtagaaaacctttcgatatttacaccctcaaatatggtactaagatcactctttaat 29892169  T
Q  222 actgaaa 228  Q
    |||||||    
T  29892168 actgaaa 29892162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 20748390 - 20748196
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||| |||||||| | ||||| ||| |||  | || |||||||||||| ||| |||||||||||||||||||| |    
T  20748390 gttactaggttgagtcacgaccaggtcgccctctttaacatgtttcatggtactgtccaaaattgtgcaaggccgactatcaaccacgccgcctccagaa 20748291  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttt 218  Q
    | |||||||| ||| || |||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||    
T  20748290 t-aaaacaagtccatctacaactgtgcggttaactactgcaccgtagaaaacggttcgagaattaca-ccttaaatatggtactaaaaccactcttt 20748196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12406459 - 12406250
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| | || ||  |||||||||| |||| ||||| |||||||||| || ||    
T  12406459 gttactagattgagtcacgaccaggtcgctctcttaaagacgtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgccgccttcatga 12406360  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| || || ||||| |||||||| ||||||||||||||| ||||||||||||  |||| ||| ||||||||||||| |||||| | |||| ||||||    
T  12406359 taaaa-catgctcaactacaactgtgtggttaactactgcaccgtagaaaaccgtgagagatttataccctcaaatatgatactaaaatcactttttaat 12406261  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  12406260 actgaaaccac 12406250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 104 - 232
Target Start/End: Complemental strand, 11534735 - 11534608
Alignment:
Q  104 accacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggta 203  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11534735 accacgccgcctccaggataaaa-caagctcaactacaactgtgcggtgaactactgcattgtagaaaaccgttccagaattacaccctcaaatatggta 11534637  T
Q  204 ctaagaccactctttaatactgaaaccac 232  Q
    ||||||||||||||||||| |||||||||    
T  11534636 ctaagaccactctttaatattgaaaccac 11534608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 104 - 232
Target Start/End: Complemental strand, 11560245 - 11560118
Alignment:
Q  104 accacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggta 203  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11560245 accacgccgcctccaggataaaa-caagctcaactacaactgtgcggtgaactactgcattgtagaaaaccgttccagaattacaccctcaaatatggta 11560147  T
Q  204 ctaagaccactctttaatactgaaaccac 232  Q
    ||||||||||||||||||| |||||||||    
T  11560146 ctaagaccactctttaatattgaaaccac 11560118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 21309020 - 21309160
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||| ||||||| || || ||||||||| |||||| ||||||||||||||||||||||    
T  21309020 gttactaggttgagtcactaccatatcgctctctttaagacgtttcatggcactgcccaaaattgtgcaatgcagactatcaaccacgccgcctccagga 21309119  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcac 163  Q
    | ||||||||| || || ||||||||||||||||||||||||    
T  21309120 t-aaaacaagctcagctacaactgtgcggttaactactgcac 21309160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 13736784 - 13736617
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||| | |||||||| ||||||||| |||||||||||||||| || || ||||||||||| |||| | ||||||| | ||||||||||    
T  13736784 gttactaggttgagtcgccaccaggtccctctctttacgacgtttcgtggcactgcctaaaattgtgcaaggaagactaccaaccacactgcctccagga 13736685  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 190  Q
    | ||||||||| || || ||| ||||||  |||||||||||||||||||||| |||||||| |||||||    
T  13736684 t-aaaacaagcacatctacaaatgtgcgaataactactgcactgtagaaaactgttcgagatttacacc 13736617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 232
Target Start/End: Original strand, 14508997 - 14509182
Alignment:
Q  46 gtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactg 145  Q
    ||||||||||| ||||||||||||| ||||    || |||||||||| ||||  |||||||||||||| |||| ||||||| ||||| || || ||||||    
T  14508997 gtcgctctcttcaagacgtttcgtgtcactgttcaaaattgtgcaagacagattatcaaccacgccgcttccaagataaaa-caagctcatctacaactg 14509095  T
Q  146 tgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaaccac 232  Q
    | || |||||||||||| ||||||||| ||||||||||||||| |||| |||||||||| ||||||| || |||||||||||||||||    
T  14509096 ttcgattaactactgcattgtagaaaatcgttcgagaattaca-cctccaatatggtaccaagaccattcttttaatactgaaaccac 14509182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 25316672 - 25316494
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgc---ctcca 118  Q
    |||||||| ||||||| ||||||||||||||  |||||||||||| |||||||| || || ||||||||| ||| || || |||||||||||   |||||    
T  25316672 gttactagattgagtcgcgaccaggtcgctcaatttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacgccgccgtctcca 25316573  T
Q  119 ggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatat 199  Q
    |||| ||||||||  || || |||| ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  25316572 ggat-aaaacaagttcatctacaaccgtgcggttaacta-tgcactgtagaaaactgttcgagaattgcaccctcaaatat 25316494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 26204166 - 26203988
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgc---ctcca 118  Q
    |||||||| ||||||| ||||||||||||||  |||||||||||| |||||||| || || ||||||||| ||| || || |||||||||||   |||||    
T  26204166 gttactagattgagtcgcgaccaggtcgctcaatttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacgccgccgtctcca 26204067  T
Q  119 ggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatat 199  Q
    |||| ||||||||  || || |||| ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  26204066 ggat-aaaacaagttcatctacaaccgtgcggttaacta-tgcactgtagaaaactgttcgagaattgcaccctcaaatat 26203988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 11614198 - 11614039
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||  |||| | ||||||||| ||||||  ||||||| |  || |||||||||||||||| ||||||||||||||||||||||    
T  11614198 gttactaggttgagtcacgatgaggttgttctctttaaaacgttttatggcactgctcaaaattgtgcaaggcagactatcaaccacgccgcctccagga 11614099  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgaga 182  Q
    | ||||||||| ||| | ||| |||||||||||||| |||||| |||||||| ||| ||||    
T  11614098 t-aaaacaagcacaattacaattgtgcggttaactaatgcactttagaaaactgtttgaga 11614039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 19995439 - 19995300
Alignment:
Q  92 ggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccc 191  Q
    ||||||| |||||||||| | ||| | |||||||| |||||||| || ||||| |||||||||||||| ||| |||||||||| ||||||| ||||||||    
T  19995439 ggcagactatcaaccacggcaccttcgggataaaa-caagcccagctacaactatgcggttaactactacaccgtagaaaacctttcgagatttacaccc 19995341  T
Q  192 tcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    |||||||| ||||||| | |||| |||||||||||||||||    
T  19995340 tcaaatatcgtactaaaaacactatttaatactgaaaccac 19995300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 11428124 - 11428207
Alignment:
Q  149 ggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  11428124 ggttaagtactgcactgtagaaaaccgttcgagatttacaccatcaaatatggtactaagactactctttaatactgaaaccac 11428207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 228
Target Start/End: Complemental strand, 4157413 - 4157270
Alignment:
Q  84 ttgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaa 183  Q
    ||||||||| || ||  |||||||| | ||||| ||||||||| ||| | || || |||| |||||||||||||||||||||||||||| ||||||| |     
T  4157413 ttgtgcaagacatactttcaaccacactgcctctaggataaaa-caaactcagctacaacggtgcggttaactactgcactgtagaaaatcgttcgaaat 4157315  T
Q  184 ttacaccctcaaatatggtactaagaccactctttaatactgaaa 228  Q
    ||||||||| ||||||||| |||| | ||||||||||||||||||    
T  4157314 ttacacccttaaatatggtgctaatatcactctttaatactgaaa 4157270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 9751912 - 9751724
Alignment:
Q  25 actaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc--aaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||||||||||||||||  || |||||||||||||||| ||| |||||||||||  ||| |||||||||||   || ||||| |||| || ||  |||||    
T  9751912 actaggttgagtcacgaatag-tcgctctctttaagacattttgtggcactacccaaaaaattgtgcaaggggaactatcaatcacgtcgtctgtaggat 9751814  T
Q  123 aaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccact 214  Q
    ||||  ||| | |||| ||| |||||| |||||||||||||||||||| ||| ||||||||||||| |||| ||||||| ||||||||||||    
T  9751813 aaaat-aagtctaactacaattgtgcgattaactactgcactgtagaacaccattcgagaattaca-cctccaatatggcactaagaccact 9751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 19478145 - 19478241
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| ||||| |||||||    
T  19478145 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccacgataaaa 19478241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 19674302 - 19674385
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaac 105  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| || || |||||||||| ||||| ||||||    
T  19674302 gttactaggttgagtcacgaccaggtcactctctttaagacgtttcatggcactgcccaaaattgtgcaagacagactatcaac 19674385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 12183100 - 12183002
Alignment:
Q  28 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||| | |||| | ||||| || ||||||||| ||||||    
T  12183100 aggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagtttgtgcaatgtagactaacaaccgcgtcgcctccagaataaaa 12183002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 22698338 - 22698245
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  22698338 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 22698245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 31981560 - 31981653
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  31981560 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 31981653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 3901909 - 3902006
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||| | ||  |||||||||| |||  | ||||| |||||||||||||||||||    
T  3901909 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactatccaagtttgtgcaaggtagaataccaaccgcgccgcctccaggataaaa 3902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 13605190 - 13605094
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  13605190 ggttgagtcacgactaggttgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 13605094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 217
Target Start/End: Original strand, 22609587 - 22609750
Alignment:
Q  53 tctttaagacgtttcgtggcactacc-aaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggt 151  Q
    ||||||||||||||||||| ||| || ||| |||||| |||  | || ||||  ||||||||||||||||||||| ||||| ||||| |||||| | | |    
T  22609587 tctttaagacgtttcgtggtactgcctaaaaattgtggaagataaactatcagtcacgccgcctccaggataaaa-caagctcaactacaactgcgtgat 22609685  T
Q  152 taactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctt 217  Q
    |||| ||||||| |||||||||  ||||||||||||| |||| ||||||||| || ||||||||||    
T  22609686 taacaactgcacggtagaaaactattcgagaattaca-cctccaatatggtaatatgaccactctt 22609750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 22695377 - 22695226
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||| |||||  | || ||||||||||| |||||||||| || | |  || |||||||||| || |||||||| ||| ||||||||| ||    
T  22695377 gttactaggttgagacacgattatgttgctctctttaacacgtttcgtgacattgctcaaaattgtgcaagacatacaatcaatcacaccgcctccacga 22695278  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaacc 174  Q
    ||||| ||||  || || |||||||||||||||| |||||| |||||||||||    
T  22695277 taaaa-caagtacagctacaactgtgcggttaaccactgcattgtagaaaacc 22695226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 34142080 - 34142173
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  34142080 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 34142173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 34154696 - 34154789
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  34154696 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 34154789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 11428032 - 11428108
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact-accaaatattgtgcaaggcaga 97  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||    
T  11428032 gttattagattgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaagttgtgcaaggcaga 11428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 15991767 - 15991668
Alignment:
Q  101 tcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatg 200  Q
    ||||||| |||||||| ||||||||| ||||  || |||||| ||||| ||||||||||||||||| |||||||||| |||||||||||  |||||||||    
T  15991767 tcaaccaagccgcctctaggataaaa-caagttcagctgcaattgtgcagttaactactgcactgtcgaaaaccgtttgagaattacacaatcaaatatg 15991669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 15999429 - 15999330
Alignment:
Q  101 tcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatg 200  Q
    ||||||| |||||||| ||||||||| ||||  || |||||| ||||| ||||||||||||||||| |||||||||| |||||||||||  |||||||||    
T  15999429 tcaaccaagccgcctctaggataaaa-caagttcagctgcaattgtgcagttaactactgcactgtcgaaaaccgtttgagaattacacaatcaaatatg 15999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 21396699 - 21396792
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||  |||||||||||||    
T  21396699 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccatctccaggataaaa 21396792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 24192575 - 24192482
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||  |  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  24192575 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctga-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 24192482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 29491332 - 29491239
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  29491332 tgagtcacgaccaagtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 29491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 10642706 - 10642803
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||| |  |  |||||||||| |||| | ||||| |||||||||| ||||||||    
T  10642706 ggttgagtcacgacaatgtcgctttctttaagacgtttcgtggcactatccgaggttgtgcaaggtagactaacaaccgcgccgcctcccggataaaa 10642803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 11534784 - 11534736
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 70  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11534784 gttactaggttgagtcaagaccaggtcgctctctttaagacgtttcgtg 11534736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 11560294 - 11560246
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 70  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11560294 gttactaggttgagtcaagaccaggtcgctctctttaagacgtttcgtg 11560246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 5601072 - 5600974
Alignment:
Q  28 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||||||  |  ||||| |||| |||  | ||||| ||||||||||| |||||||    
T  5601072 aggttgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacccgagtttgtgtaaggtagaataacaaccgcgccgcctccaagataaaa 5600974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 21401755 - 21401844
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  ||||| |||| |||| | ||||| ||||| |||||||||    
T  21401755 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtggaaggtagactagcaaccgcgccgtctccaggat 21401844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 24191478 - 24191385
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||  |  |||||||||| |||| |  |||| ||||| |||||||||||||    
T  24191478 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctga-gttgtgcaaggtagactagtaaccgcgccgtctccaggataaaa 24191385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 34375919 - 34376012
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||| ||  |||||||| | |||  | ||||| ||||| |||||||||||||    
T  34375919 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaacgtagattagcaaccgcgccgtctccaggataaaa 34376012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 35129640 - 35129704
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacg 109  Q
    |||||||||||||||||||||||| ||||||| || || ||||||||| |||||| ||||||||||    
T  35129640 aggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaa-gcagactatcaaccacg 35129704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 25314393 - 25314358
Alignment:
Q  193 caaatatggtactaagaccactctttaatactgaaa 228  Q
    ||||||||||||||||||||||||||||||||||||    
T  25314393 caaatatggtactaagaccactctttaatactgaaa 25314358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 26201887 - 26201852
Alignment:
Q  193 caaatatggtactaagaccactctttaatactgaaa 228  Q
    ||||||||||||||||||||||||||||||||||||    
T  26201887 caaatatggtactaagaccactctttaatactgaaa 26201852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 11956800 - 11956762
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttc 67  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11956800 ggttgagtcatgaccaggtcgctctctttaagacgtttc 11956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 22703461 - 22703368
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||  | |||| | |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  22703461 tgagtcacgattatgtcgttttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 22703368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 5740889 - 5740792
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||| ||| ||||| ||||||||||||||||||  | ||||||  ||  ||||||||||  ||| ||||||| ||||||| | |||||||||    
T  5740889 ggttgagtcatgactaggtcactctctttaagacgtttcacgacactactcaagtttgtgcaaggtggactatcaaccgcgccgccactaggataaaa 5740792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 11613705 - 11613664
Alignment:
Q  191 ctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  11613705 ctcaaatatggtactaagatcactatttaatactgaaaccac 11613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 17281662 - 17281613
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc 78  Q
    ||||||||||||| || |||||| |||||||||||||||| |||||||||    
T  17281662 ggttgagtcacgagcatgtcgctttctttaagacgtttcgcggcactacc 17281613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 2882861 - 2882821
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagac 62  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  2882861 gttactaggttgagtcacgaccatatcgctctctttaagac 2882821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 21309164 - 21309208
Alignment:
Q  184 ttacaccctcaaatatggtactaagaccactctttaatactgaaa 228  Q
    ||| ||| ||||||| |||||||||||||||||||||||||||||    
T  21309164 ttataccttcaaatacggtactaagaccactctttaatactgaaa 21309208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 2760348 - 2760297
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 73  Q
    ||||||||||| ||| |||||||||||| ||||||||| |||||| ||||||    
T  2760348 gttactaggttaagttacgaccaggtcgttctctttaaaacgttttgtggca 2760297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 2818238 - 2818149
Alignment:
Q  36 tcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||| |||||||||||||| | |  |||||| ||  |||||||||| |||| |  |||| ||||| |||||||||||||    
T  2818238 tcacgaccaggtcgctttctttaagacgttttgcgttactacctaa-gttgtgcaaggtagactagaaaccgcgccgtctccaggataaaa 2818149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 32815138 - 32815065
Alignment:
Q  52 ctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||| |||||| || || ||||||||| |||||| |||||||||| | || |||| ||||||    
T  32815138 ctctttaagacgtttcgcggcactgcccaaaattgtgcaa-gcagactatcaaccacgacacccccagtataaaa 32815065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 6728430 - 6728397
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtt 65  Q
    |||||||||||||||||||| |||||||||||||    
T  6728430 tgagtcacgaccaggtcgctttctttaagacgtt 6728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 12851809 - 12851906
Alignment:
Q  30 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaa 127  Q
    ||||||||||||||| | ||||||   ||||| |||||| | |||| || || ||||||||||||| || |||||||| ||| | || ||||||||||    
T  12851809 gttgagtcacgaccaagacgctcttcataagatgtttcgcgccactgcccaaaattgtgcaaggcaaactatcaaccatgccacttctaggataaaaa 12851906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 2863558 - 2863518
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagac 62  Q
    |||||||||||||||||| | || |||||||||||||||||    
T  2863558 gttactaggttgagtcactatcatgtcgctctctttaagac 2863518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 5856158 - 5856206
Alignment:
Q  184 ttacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
    ||||||| |||||||||||| ||| | |||||| |||||||||||||||    
T  5856158 ttacaccttcaaatatggtagtaaaatcactctataatactgaaaccac 5856206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 9e-82; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 10135445 - 10135637
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  10135445 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctctagga 10135544  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc 215  Q
    | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  10135545 t-aaaacaagcccagttgcaactgtgcggttaactactgcactgtagaaaaccgttcaagaattacaccctcaaatatggcactacgaccactc 10135637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 19799119 - 19798910
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| | || |||||||||| ||||| ||||||||||||||||||||||    
T  19799119 gttactaggttgagtcacgatcagatcgctctctttaagacgtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccagga 19799020  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  19799019 taaaa-caagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagatttacaccttcaaatatggcactaagaccactctttaat 19798921  T
Q  222 actgaaaccac 232  Q
    ||| |||||||    
T  19798920 actaaaaccac 19798910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 10140078 - 10140299
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||||||| |||| ||||    
T  10140078 gttactaggttgagtcacgatcaggtcgctctctttaacacgtttcgtggcactactcaaaattgtgcaaggcagacaatcaaccacgccacctctagga 10140177  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgta-------gaaaaccgttcgagaattacaccctcaaatatggtactaagaccact 214  Q
    | |||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |    
T  10140178 t-aaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgaaaaccgttcgagaattacaccctcaaatatggtactaagaccatt 10140276  T
Q  215 ctttaatactgaaaccacctatg 237  Q
    |||||||| ||||||||||||||    
T  10140277 ctttaatattgaaaccacctatg 10140299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 16649718 - 16649509
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  | || ||||||||||  |||| |||||||||||||||||| |||    
T  16649718 gttactaagttgagtcacgaccaggtcgctctctttaagacgttt-gtggcactgtccaaaattgtgcaagatagactatcaaccacgccgcctccggga 16649620  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||| ||| || |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  16649619 taaaa-caagtccagctacaactgtgtggttaactactgcactgtagaaaactgttcgagaattacaccctcaaatatggtactaataccactctttaat 16649521  T
Q  222 actgaaaccacc 233  Q
    ||||||||||||    
T  16649520 actgaaaccacc 16649509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 33301286 - 33301077
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||||||||| || || |||||||||| ||||| ||||||||||||||||||||||    
T  33301286 gttactagcttgaatcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccagga 33301187  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||   || || |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  33301186 taaaa-caatttcatctacaactgtgcggttaactactgcactgtagaaaactgttcgagaattacaccttcaaatatggtactaagaccactcgttaat 33301088  T
Q  222 actgaaaccac 232  Q
    ||| |||||||    
T  33301087 acttaaaccac 33301077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 26927828 - 26927619
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| | || || |||||||||||||||| ||||||||||||||||| |  |    
T  26927828 gttactaggttgagtcacgactaagtcgctctctttaagacgtttcgtggcattgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaaaa 26927729  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || ||||||| |  |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  26927728 taaaa-caagcccagctacaactgtacacttaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactctttaat 26927630  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  26927629 actgaaaccac 26927619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 40165969 - 40166178
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || |||||||||||||||| | |||| |||||||||| ||||    
T  40165969 gttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactaacaacaacgccgcctctagga 40166068  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| ||||| ||||| | || |||||||||||||||||||||||||||||| | ||||||  || |||||||||||||||||||||||||||    
T  40166069 t-aaaacaagcacaactacaactatacgattaactactgcactgtagaaaaccgttcgaaatttacacattcgaatatggtactaagaccactctttaat 40166167  T
Q  222 actgaaaccac 232  Q
    |||||||||||    
T  40166168 actgaaaccac 40166178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 23192923 - 23192715
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||| |||||||||||| |||||||||    
T  23192923 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccagga 23192824  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| ||| || ||| ||| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| || |||||    
T  23192823 t-aaaacaag-ccagctacaattgttcgattaactactgcactgtagaaaaccgttcgagaattaca-cctccaatatggtaccaagaccattcttttaa 23192727  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  23192726 tactgaaaccac 23192715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 47451330 - 47451147
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||| ||||||||||||||||||| |||    
T  47451330 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctccaagat 47451231  T
Q  123 aaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaa 207  Q
     ||||||||| ||||| ||||||| || |||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||    
T  47451230 -aaaacaagctcaactacaactgttcgattaactactgtactgcagaaaaccgttcgagaattacacctccaaatatggtactaa 47451147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 51041567 - 51041360
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||| ||    
T  51041567 gttactaagttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaa-attgtgcaaggcagactatcaaccacgccgcctccaaga 51041470  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| |||||||| || ||||||| || |||| ||||||||||||||||| |||||||||| || |||  ||||||||||||||||| |||||||||||    
T  51041469 taaaa-caagcccagctacaactgttcgattaattactgcactgtagaaaatcgttcgagaactatacctccaaatatggtactaagatcactctttaat 51041371  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  51041370 attgaaaccac 51041360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 100 - 234
Target Start/End: Original strand, 25843823 - 25843956
Alignment:
Q  100 atcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatat 199  Q
    |||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25843823 atcaaccacgccgcctccagtataaaa-caagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcatatat 25843921  T
Q  200 ggtactaagaccactctttaatactgaaaccacct 234  Q
    |||||||||||||||||||||||||||||||||||    
T  25843922 ggtactaagaccactctttaatactgaaaccacct 25843956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 228
Target Start/End: Original strand, 38620687 - 38620886
Alignment:
Q  27 taggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| || |  | || |||||||||||||||| |||||| |||||||||||| |||||||    
T  38620687 taggttgagtcgcgaccagatcactctctttaagacgtttcgtg-cattgtccaaaattgtgcaaggcagactatcaactacgccgcctccaagataaaa 38620785  T
Q  127 acaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactga 226  Q
     |||| |||||| ||||||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  38620786 -caagtccaactacaactgtgcggttaactactgcattgtagaaaactgtttgagatttacaccctaaaatatggtattaagaccactctttaatactga 38620884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 18784654 - 18784457
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||||||| || || |||||||||||||||| |||||||||||||||||||| |    
T  18784654 gttactaggttgagtcacgatcaggtcgctct-tttaagacatttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagaa 18784556  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    | |||||||| ||| |        ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  18784555 t-aaaacaagtccagc--------tgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaa 18784466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 39588473 - 39588264
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||  | || |||||||||| ||||| ||| ||||||||  ||||||||    
T  39588473 gttactaggttaagtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctactccagga 39588374  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||| ||||| || || ||| ||| || |||||||||||| |||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||    
T  39588373 t-aaagcaagctcatctacaattgttcgattaactactgcagtgtagaaaaccgttcgagaattacacctccaaatatggtactgagaccaatctttaat 39588275  T
Q  222 actgaaaccac 232  Q
    ||| |||||||    
T  39588274 actaaaaccac 39588264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 63 - 232
Target Start/End: Original strand, 8137969 - 8138137
Alignment:
Q  63 gtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgca 162  Q
    ||||||||||| | || ||  ||||||||||||||| ||||||||   |||||||||||||||| ||||| || || |||||||||||||||||||||||    
T  8137969 gtttcgtggcattgcctaaagttgtgcaaggcagactatcaaccatatcgcctccaggataaaa-caagctcagctacaactgtgcggttaactactgca 8138067  T
Q  163 ctgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatactgaaaccac 232  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8138068 atgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccaccctttaatactgaaaccac 8138137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 16035597 - 16035784
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||  | ||  ||||||||| ||||  ||||||||||||||||||||||    
T  16035597 gttactaggttgagtcacgaccaggtcgccctctttaacacgtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccagga 16035696  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagacca 212  Q
    | ||||||||| || || ||| |||| |||||||||||||||| ||||||||| |||||| |||||| |||| |||||||||| |||||||    
T  16035697 t-aaaacaagctcatctacaaatgtgtggttaactactgcactttagaaaaccattcgag-attaca-cctccaatatggtaccaagacca 16035784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 47455492 - 47455353
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |  | || |||||||||| ||||  ||||||||||||||||||||||    
T  47455492 gttattaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcctccagga 47455393  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgca 162  Q
    | |||||||||| | || ||||||| || ||||||||||||    
T  47455392 t-aaaacaagcctagctacaactgttcgattaactactgca 47455353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 11806348 - 11806549
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| ||||||||||||| ||||| ||||||||||||||| |||||||| |||| |  ||  | || |||||||||| |||||||||||||||| ||| |    
T  11806348 gttattaggttgagtcacaaccagatcgctctctttaagatgtttcgtgacactgcgcaaagtggtacaaggcagactatcaaccacgccgccttcagaa 11806447  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    |||||  |||  ||||| ||| ||||||||||| ||||||| || |||||| |||| |||| ||||||  |||||||||| ||||||| |||||||||||    
T  11806448 taaaag-aagttcaactacaattgtgcggttaaatactgcagtgcagaaaatcgtttgagatttacactttcaaatatggcactaagatcactctttaat 11806546  T
Q  222 act 224  Q
    |||    
T  11806547 act 11806549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 3094103 - 3094187
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaacc 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| |||||||    
T  3094103 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 3094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 10106100 - 10106196
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  10106100 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 10106196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 12259985 - 12260124
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||| |||| || || |||||||||| ||||| ||||||||||||| ||  ||||    
T  12259985 gttacttggttgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactatcaaccacgccgtctttagga 12260084  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgca 162  Q
    | ||||||| | ||  | ||||| |||||||||||||||||    
T  12260085 t-aaaacaaacacatgtacaactatgcggttaactactgca 12260124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 25855160 - 25855229
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaa 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||    
T  25855160 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaa 25855229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 38734272 - 38734368
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  |  |||||||||| |||| | ||||||||||| |||||||||||||    
T  38734272 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccta-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 38734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 3094194 - 3094285
Alignment:
Q  140 caactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaacca 231  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| || ||||||||||||||||    
T  3094194 caactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtattaagaccaatcttttaatactgaaacca 3094285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 5724979 - 5725072
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  5724979 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 5725072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 36684810 - 36684717
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  36684810 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 36684717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 13890810 - 13890906
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||| |||| | ||||||| ||| |||||||||||||    
T  13890810 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactacccaa-gttgtgcaaggtagactaacaaccacaccgtctccaggataaaa 13890906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 39747263 - 39747167
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||| ||  |||||||||| |||| | |||||||| || |||||||||||||    
T  39747263 ggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactagcaaccacgtcgtctccaggataaaa 39747167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 28434679 - 28434471
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||| || | || | | |||| ||||||||||||| || ||||  ||||  |||||||   ||||| |||||||  |||| ||||||||    
T  28434679 gttactaggttgagttacaagcatgccactctttttaagacgtttcatgacactgtcaaac-ttgtgcaccacagactatcaaccttgccgtctccagga 28434581  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaa 220  Q
    ||||| ||||  ||||| ||| ||||| ||||||||||  ||| ||||||||||||||||| ||||| |||| |||||||||| |||| || || |||||    
T  28434580 taaaa-caagttcaactacaattgtgcagttaactactttactatagaaaaccgttcgagatttaca-cctccaatatggtacaaagatcattcttttaa 28434483  T
Q  221 tactgaaaccac 232  Q
    ||||||||||||    
T  28434482 tactgaaaccac 28434471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 3584601 - 3584694
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| || |||||| || ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  3584601 tgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 3584694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 11251208 - 11251115
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  11251208 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 11251115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 16833538 - 16833682
Alignment:
Q  87 tgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta 186  Q
    |||||| || || ||||||| |||| | |||||||||||| ||  | || || ||||||| || |||||||||||| ||||||||||||||||| |||||    
T  16833538 tgcaagacaaactatcaacctcgccacatccaggataaaa-cagcctcagctacaactgttcgattaactactgcattgtagaaaaccgttcgaaaatta 16833636  T
Q  187 caccctcaaatatggtactaagaccactc-tttaatactgaaaccac 232  Q
    || |||| |||||||||| ||||||| || |||||||||||||||||    
T  16833637 ca-cctccaatatggtaccaagaccattcttttaatactgaaaccac 16833682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 34318319 - 34318226
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  34318319 tgagtcacgaccaagtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 34318226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 37404511 - 37404418
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  37404511 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 37404418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 26651264 - 26651168
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||| |||| | ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  26651264 ggttgagtcacgaccaggtcactctctttaagatgttttgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 26651168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 2493923 - 2493820
Alignment:
Q  23 ttactaggttgagtcacgacc-aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||| | | | |||||||||||||||||||||||||||||||| || || ||||||||| ||| || |||||||||| |||| ||||||    
T  2493923 ttactaggttgagtcgcaaactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaa-gcaaactatcaaccacggcgcccccagga 2493825  T
Q  122 taaaa 126  Q
    |||||    
T  2493824 taaaa 2493820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 36724698 - 36724801
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| ||||||| | || |||||||||||||||||||||||  |||||||||| || ||||||||| ||||||||||||||||| |||| ||| ||    
T  36724698 ttactaggctgagtcatggactaggtcgctctctttaagacgttttatggcactacccaaaattgtgcaa-gcagacaatcaaccacgacgcccccaaga 36724796  T
Q  122 taaaa 126  Q
    |||||    
T  36724797 taaaa 36724801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 41098050 - 41097851
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaac 128  Q
    ||||||||||||||||||||||| ||||||||||   ||  |||||||||  | ||||||||||| |||| | |||||  |  |||||||||||||||      
T  41098050 ggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtgt-gcctccaggataaaac- 41097953  T
Q  129 aagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaa 227  Q
     ||||||  | || |||| || |||| |||||||| ||| |  | |||||||||| || || |||| |||||||||||||||||||||||||||||||||    
T  41097952 -agcccagtt-cacctgttcgattaaatactgcaccgtatatgatcgttcgagaaataacatcctctaatatggtactaagaccactctttaatactgaa 41097855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 5730105 - 5730198
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| || |||||| || ||||||||||| |||| | ||||| | ||| |||||||||||||    
T  5730105 tgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaa-attgtgcaaggtagactagcaaccgcaccgtctccaggataaaa 5730198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 12906166 - 12906246
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||| || || ||||||||| |||||| |||||||||| |||| |||||||||||    
T  12906166 aggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaa-gcagactatcaaccacgacgcc-ccaggataaaa 12906246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 37409632 - 37409539
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| |||||  ||||||||||||    
T  37409632 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtttccaggataaaa 37409539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 5602523 - 5602427
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||  |  |||||||||| |||| | ||||||||||| ||||| |||||||    
T  5602523 ggttgagtcacgaccagatcgctctctttaagacgtttcgctgcactacccta-gttgtgcaaggtagactaacaaccacgccgtctccaagataaaa 5602427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 27716443 - 27716536
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||  || || |||||||||||||    
T  27716443 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaacagcgtcgtctccaggataaaa 27716536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 8267802 - 8267729
Alignment:
Q  159 tgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    ||||||||| | || |||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||||    
T  8267802 tgcactgtaaataatcgttcgagaaataacaccctctaatatggtactaagaccactcttaaatactgaaacca 8267729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 14582096 - 14582192
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||||||||  |  |||||||||| |||| | ||||||| ||| |||||||||||||    
T  14582096 ggttgagttacgatcaggtcgctctctttaagaagtttcgcggcactacccta-gttgtgcaaggtagactaacaaccacaccgtctccaggataaaa 14582192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 8900243 - 8900347
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||  ||||||||||||| |||||| ||| ||||  | ||  ||||||||  || || ||||| ||| ||||||||||||    
T  8900243 gttactaggttgagtcacgaccatatcgctctctttaaaacgttttgtgacactgtctaaagttgtgcaaaacatactatcaatcacaccgcctccagga 8900342  T
Q  122 taaaa 126  Q
    |||||    
T  8900343 taaaa 8900347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 27761944 - 27761841
Alignment:
Q  23 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||| | ||| ||||| |||||||||| |||||||||||||||  | || ||||||||| |||||| |||||||||| || | ||||||    
T  27761944 ttactaggttgagtcgcagactaggtcactctctttaaaacgtttcgtggcactgtccaaaattgtgcaa-gcagactatcaaccacgacgtccccagga 27761846  T
Q  122 taaaa 126  Q
    |||||    
T  27761845 taaaa 27761841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 4633031 - 4632978
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcacta 76  Q
    |||||||||||||||||||| | ||||||||||||||||||||| | |||||||    
T  4633031 ttactaggttgagtcacgactatgtcgctctctttaagacgttttgcggcacta 4632978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 11387925 - 11387841
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctcc 117  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| ||||    
T  11387925 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctcc 11387841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 16832090 - 16832143
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 75  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||| ||||    
T  16832090 gttactatattgagtcacgaccaggtcgctctctttaagacgttccgtgacact 16832143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 19422982 - 19422927
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacc 78  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||  ||||||||    
T  19422982 ttactgggttgagtcacgatcagatcgctctctttaagacgtttcgctgcactacc 19422927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 8267929 - 8267891
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttc 67  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8267929 ggttgagtcacgaccaggtcgctttctttaagacgtttc 8267891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 23193306 - 23193225
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||| ||||||||||| |||||| ||| || ||| ||||| |||||| |||||||||| |||| ||| |||||||    
T  23193306 aggtcgctctctataagacgtttcatggcacaacccaaaattatgcaa-gcagactatcaaccacgacgcccccatgataaaa 23193225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 33381004 - 33380923
Alignment:
Q  44 aggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||| |||| |  || ||||||||| |||||| |||||||||| || | ||| |||||||    
T  33381004 aggtcgctctctttaagacgtttcgtgacactgctcaaaattgtgcaa-gcagactatcaaccacgacgtccccaagataaaa 33380923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 5346652 - 5346748
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact-accaaatattgtgcaaggcagacaatcaaccacgccgcctcca 118  Q
    ||||||||||||||| || | ||||||| ||||||||| |||||| ||||||||  |||||| |||| |||  ||||| ||||| |||||||||||||    
T  5346652 gttactaggttgagttacaatcaggtcgttctctttaaaacgttttgtggcactgtccaaat-ttgtacaatacagactatcaatcacgccgcctcca 5346748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 24159904 - 24159801
Alignment:
Q  23 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||   ||| || || ||||||||| |||||| |||||| ||| || | ||||||    
T  24159904 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtaatactgcccaaaattgtgcaa-gcagactatcaacgacgacgtccccagga 24159806  T
Q  122 taaaa 126  Q
    |||||    
T  24159805 taaaa 24159801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 48246756 - 48246685
Alignment:
Q  54 ctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  48246756 ctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 48246685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 25661899 - 25661858
Alignment:
Q  51 tctctttaagacgtttcgtggcactaccaaatattgtgcaag 92  Q
    |||||||||||||||| ||||||||||| || ||||||||||    
T  25661899 tctctttaagacgttttgtggcactacccaaaattgtgcaag 25661858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 25779270 - 25779211
Alignment:
Q  177 tcgagaattacaccctcaaatatgg-tactaagaccactc---tttaatactgaaaccac 232  Q
    ||||||||||||||||||||||||| |  |||||||||||   |||||||||||||||||    
T  25779270 tcgagaattacaccctcaaatatggcttttaagaccactcaaatttaatactgaaaccac 25779211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 83055 - 83260
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||| |||||||||||| |||||||| |||||||||||||    
T  83055 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtgacaccacccaaaattatgcaaggcagactatcaaccatgccgcctccagga 83154  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  ||    
T  83155 t-aaaacaagctcagctgcaactgtgcggttaactactgcactgtagaaaacctttcgagaattacaccttc-aatatggtactaagatcactctt--at 83250  T
Q  222 actgaaacca 231  Q
    ||||||||||    
T  83251 actgaaacca 83260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 25388 - 25597
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||| |  ||||| |||||||||||||||| |||| |||| |  || |||||||||| ||||| |||||||||||||| |||||||    
T  25388 gttactaggttgagtcacaattaggtcactctctttaagacgttacgtgacactgcgtaaaattgtgcaagacagactatcaaccacgccgcgtccagga 25487  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||    
T  25488 taaaa-caagcccaactacaactgtgcggttaactactacactgtagaaaaccgttcgagacttacatcttcaaatatggtactaagaccactctttaat 25586  T
Q  222 actgaaaccac 232  Q
    | |||||||||    
T  25587 attgaaaccac 25597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 29222 - 29316
Alignment:
Q  100 atcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaa 195  Q
    ||||||||||||| || ||||||||||  ||| | ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  29222 atcaaccacgccgtcttcaggataaaat-aagtctaactataactgtgcggttaactactgcattgtagaaaaccgttcgagaattacaccttcaa 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 166190 - 165998
Alignment:
Q  24 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggata 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| || || |||||||||||||||||||||||     
T  166190 tactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggat- 166092  T
Q  124 aaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactcttt 218  Q
    |||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||| |||  | |||||||||||||||| |||||    
T  166091 aaaacaagcccagctgcaactgtgcggttaattactgcactgtaaaaaaccgttcgagaattaca-cctttactatggtactaagaccaatcttt 165998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 255806 - 255983
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||| ||| || |||||||||||| |||||||||||| |||||||||||||||| || |||||||||| || || |||||| | |||||||||||||    
T  255806 gttactatgttaagacacgaccaggtcactctctttaagaggtttcgtggcactacccaaaattgtgcaagacatactatcaactatgccgcctccagga 255905  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatg 200  Q
    | |||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  255906 t-aaaacaagtccagctacaactgtgtggttaactactgcactgtagaaaaccgttcgaggattacaccctcaaatatg 255983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 35623 - 35782
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||| ||||  | || |||||||||||||||| ||||||||||||||||||||||    
T  35623 gttactaggttaagttacgaccatgccgctctctttaagacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccagga 35722  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgaga 182  Q
    | |||||||| ||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  35723 t-aaaacaagtccagctacaactgtgcggttaactactgcactgtagaaaatcgttcgaga 35782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 361 - 567
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||||||||||||||||||| | |||||| | ||||||||||||| ||||| |  | ||  ||||||||| || || |||||||||| ||||||||||||    
T  361 ttactaggttgagtcacgactatgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggat 460  T
Q  123 aaaaacaagcccaactgcaactgtgcg------gttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactct 216  Q
    |||| ||||| || || ||||||||||      |||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  461 aaaa-caagctcagctacaactgtgcgcgcgcggttaactactgcactgtagaaaaccgtttgagatttacaccctcaaatacggtactaagaccactct 559  T
Q  217 ttaatact 224  Q
    || |||||    
T  560 ttcatact 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 165134 - 164928
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    |||||||||||||||||||| | |||||| | ||||||||||||| ||||| |  | ||  ||||||||| || || |||||||||| ||||||||||||    
T  165134 ttactaggttgagtcacgactatgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggat 165035  T
Q  123 aaaaacaagcccaactgcaactgtgcg------gttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactct 216  Q
    |||| ||||| || || ||||||||||      |||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  165034 aaaa-caagctcagctacaactgtgcgcgcgcggttaactactgcactgtagaaaaccgtttgagatttacaccctcaaatacggtactaagaccactct 164936  T
Q  217 ttaatact 224  Q
    || |||||    
T  164935 ttcatact 164928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 3980 - 4163
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||||||||||||||||||||||  |||||||||||||||| |||  ||||| | |||||  || |||||| || || ||||||||||||||||||||||    
T  3980 gttactaggttgagtcacgaccatatcgctctctttaagactttttatggcaatgccaaaatttttgcaagacataccatcaaccacgccgcctccagga 4079  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaat 221  Q
    | |||||||||||                  |||||||||| ||||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  4080 t-aaaacaagccc------------------aactactgcattgtagaaaaccattcgagatttatacccttaaatatggtactaagaccactctttaat 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 224
Target Start/End: Original strand, 13265 - 13460
Alignment:
Q  26 ctaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaa 125  Q
    |||||| ||||| ||| || ||| || |||||||||||||| ||| |||| || || ||||| ||||| |||| |||||||| |  ||||||| |||| |    
T  13265 ctaggtggagtcccgatcaagtcactttctttaagacgtttggtgacactgcccaaaattgttcaaggtagactatcaaccatggtgcctccaagataca 13364  T
Q  126 aacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctttaatact 224  Q
    | ||||  ||||| |||||||||||||||||||| ||||||||||||  |||||  | ||||| |||| |||||||||||||||||||| |||||||||    
T  13365 a-caagttcaactacaactgtgcggttaactacttcactgtagaaaatggttcgcaatttaca-cctctaatatggtactaagaccact-tttaatact 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 2870 - 2774
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  2870 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 2774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 10830 - 10734
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  10830 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 10734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 1562 - 1658
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  1562 ggttaagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 7043 - 7139
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||||||||| |||||||||||||    
T  7043 ggttgagttacgaccaggtcgttctctttaagacgtttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 146406 - 146362
Alignment:
Q  157 actgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||    
T  146406 actgcactgtagaaaattgttcgagaattacactctcaaatatgg 146362  T

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Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 155587 - 155552
Alignment:
Q  36 tcacgaccaggtcgctctctttaagacgtttcgtgg 71  Q
    |||||||||||||| |||||||||||||||||||||    
T  155587 tcacgaccaggtcgttctctttaagacgtttcgtgg 155552  T

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Target: scaffold0060 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 37001 - 37103
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggat 122  Q
    ||||| || |||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||| |||| | ||||| ||||| |||||||||    
T  37001 ttactggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggat 37099  T
Q  123 aaaa 126  Q
    ||||    
T  37100 aaaa 37103  T

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Target: scaffold0060; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 47955 - 47756
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaac 128  Q
    ||||||||||||||||||||||| ||| ||||||   ||  ||||||||| || ||||||||||| |||| | |||||  |  ||||| |||||||||      
T  47955 ggttgagtcacgaccaggtcgctttctataagacaaatcagggcactacccaaaattgtgcaaggtagactaacaaccgtgt-gcctcaaggataaaac- 47858  T
Q  129 aagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaa 227  Q
     ||||||  | |  |||| || |||| |||||||| ||| |  | |||||||||| || ||||||| |||||||||||||||||||||||||||||||||    
T  47857 -agcccagtt-cgcctgttcgattaaatactgcaccgtatatgatcgttcgagaaataacaccctctaatatggtactaagaccactctttaatactgaa 47760  T

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Target: scaffold0060; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 52857 - 52799
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  52857 cgttcgagaaataacaccctctaatatggtactaagaccactctttaatactgaaacca 52799  T

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Target: scaffold0055 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 3058 - 3151
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  3058 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 3151  T

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Target: scaffold0052 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 81477 - 81384
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  81477 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 81384  T

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Target: scaffold0594 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 9303 - 9210
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  9303 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggaagactagcaaccgcgccgtctccaggataaaa 9210  T

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Target: scaffold0166 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 13835 - 13742
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  13835 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 13742  T

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Target: scaffold0166; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 19302 - 19197
Alignment:
Q  23 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaacc---acgccgcctccag 119  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | |||||    ||||| ||||||    
T  19302 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcggcgccgtctccag 19204  T
Q  120 gataaaa 126  Q
    |||||||    
T  19203 gataaaa 19197  T

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Target: scaffold0014 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 31545 - 31638
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||    
T  31545 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 31638  T

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Target: scaffold0014; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 26373 - 26466
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    ||||| |||| || ||||||||||||||||||||||| |||||||||  | ||||||||||| |||| | ||||| ||||| |||||||||||||    
T  26373 tgagttacgatcaagtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 26466  T

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Target: scaffold0067 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 34067 - 33970
Alignment:
Q  29 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||| |||  | ||||| | || ||| ||||||||||    
T  34067 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccaaagtttgtacaaggtagaataacaaccgctcctccttcaggataaaa 33970  T

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Target: scaffold0020 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 231
Target Start/End: Complemental strand, 1329 - 1125
Alignment:
Q  24 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggata 123  Q
    |||| ||||||||||||||||||||||| ||||||||||   ||  |||||||||  | ||||||||||| |||| | |||||  |  ||||||| ||||    
T  1329 tactgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtgt-gcctccaagata 1231  T
Q  124 aaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta-caccctcaaatatggtactaagaccactctttaata 222  Q
    |||   ||||||  | || |||| || |||| |||||||| ||| |  | |||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  1230 aaac--agcccagtt-cacctgttcgattaaatactgcaccgtatatgatcgttcgagaaataacaccctctaatatggtactaagaccactctttaata 1134  T
Q  223 ctgaaacca 231  Q
    |||||||||    
T  1133 ctgaaacca 1125  T

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Target: scaffold0517 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 3563 - 3656
Alignment:
Q  32 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaa 126  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||| |||| | ||||| |||||  ||||||||||||    
T  3563 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtttccaggataaaa 3656  T

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Target: scaffold0184 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 2298 - 2474
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccagga 121  Q
    |||| |||||||||||| || ||||||| ||||||||| |||||| ||| || |    || |||||||||| |||| | |||||||||||||||| || |    
T  2298 gttattaggttgagtcatgatcaggtcgttctctttaatacgttttgtgccattgtttaaaattgtgcaagacagata-tcaaccacgccgcctctagta 2396  T
Q  122 taaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatg 200  Q
    ||||| ||| | ||  | |||||||| | ||||||||||||| ||||||||  ||| |||||||||||||| |||||||    
T  2397 taaaa-caaactcaggtacaactgtgagattaactactgcaccgtagaaaattgttggagaattacacccttaaatatg 2474  T

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Target: scaffold0061 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 45922 - 45980
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  45922 cgttcgagaaataacaccctcaaatatggtactaagaccactctttaatactgaaacca 45980  T

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Target: scaffold0017 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 152865 - 152807
Alignment:
Q  174 cgttcgagaatta-caccctcaaatatggtactaagaccactctttaatactgaaacca 231  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  152865 cgttcgagaaataacaccctcaaatatggtactaagaccactctttaatactgaaacca 152807  T

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Target: scaffold1050 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 1194 - 1309
Alignment:
Q  87 tgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta 186  Q
    |||||||| ||| || |||||||| |||||||||  |||||||||  || || | ||||||||||||||||||||||| ||||||| ||||||||| |||    
T  1194 tgcaaggcggactataaaccacgctgcctccaggc-aaaaacaagttcagctacgactgtgcggttaactactgcactatagaaaatcgttcgagattta 1292  T
Q  187 caccctcaaatatggtac 204  Q
    |||| || ||||||||||    
T  1293 caccttc-aatatggtac 1309  T

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Target: scaffold0690 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 5410 - 5473
Alignment:
Q  154 actactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactctt 217  Q
    |||| ||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  5410 actattgcaccgtagaaaactgtttgagatttacaccctcaaatatggtactaagaccactctt 5473  T

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Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 171820 - 171734
Alignment:
Q  23 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacg 109  Q
    |||||||| |||||| | ||| |||||||||||||||||||||||||||||||| || || ||||||||| |||||| ||||||||||    
T  171820 ttactaggctgagtcgcagactaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaa-gcagactatcaaccacg 171734  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 201
Target Start/End: Original strand, 8903 - 9057
Alignment:
Q  46 gtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaacaagcccaactgcaactg 145  Q
    |||||| | |||||||| ||||||| ||| ||  || ||| || |||| |||| ||||| |||| ||||| |||||||||| |||| | | ||| ||||     
T  8903 gtcgctatgtttaagacatttcgtgacacaactcaaaattatgtaaggaagactatcaatcacgtcgccttcaggataaaa-caagtctagctgtaacta 9001  T
Q  146 tgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 201  Q
    |||| |||||||||||| |||| |||| | ||| ||||||||||||||| ||||||    
T  9002 tgcgattaactactgcattgtacaaaatcattcaagaattacaccctcatatatgg 9057  T

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Target: scaffold0097 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 15273 - 15355
Alignment:
Q  22 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactaccaaatattgtgcaaggcagacaatcaa 104  Q
    |||||||||||||||||||||||  || |||  ||||||| ||||||| ||||| |  || |||||||||| ||||| |||||    
T  15273 gttactaggttgagtcacgaccatatcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatcaa 15355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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