View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9838_low_20 (Length: 235)

Name: NF9838_low_20
Description: NF9838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9838_low_20
NF9838_low_20
[»] chr4 (36 HSPs)
chr4 (127-235)||(1585412-1585521)
chr4 (137-235)||(41414676-41414774)
chr4 (136-235)||(17794606-17794706)
chr4 (136-235)||(29203493-29203593)
chr4 (136-235)||(5483343-5483443)
chr4 (136-235)||(20716167-20716267)
chr4 (137-235)||(14332748-14332847)
chr4 (137-233)||(28669068-28669164)
chr4 (136-235)||(35310807-35310907)
chr4 (137-235)||(20281579-20281678)
chr4 (137-235)||(25297287-25297386)
chr4 (137-235)||(26916313-26916412)
chr4 (137-235)||(56318135-56318234)
chr4 (143-235)||(47867873-47867966)
chr4 (136-235)||(4058702-4058802)
chr4 (136-235)||(32323327-32323426)
chr4 (136-235)||(39078144-39078244)
chr4 (137-224)||(50080527-50080615)
chr4 (154-235)||(5815474-5815556)
chr4 (143-235)||(2229241-2229334)
chr4 (136-228)||(52535657-52535750)
chr4 (137-235)||(35529660-35529759)
chr4 (136-235)||(55580656-55580757)
chr4 (136-235)||(10069684-10069784)
chr4 (136-235)||(50145723-50145823)
chr4 (149-235)||(24940365-24940452)
chr4 (137-199)||(14583717-14583779)
chr4 (164-235)||(16604911-16604983)
chr4 (143-235)||(42915523-42915617)
chr4 (164-228)||(7654632-7654697)
chr4 (143-235)||(48793693-48793784)
chr4 (153-235)||(8178304-8178387)
chr4 (136-228)||(19351833-19351927)
chr4 (136-184)||(21722783-21722831)
chr4 (137-184)||(32280104-32280151)
chr4 (143-187)||(8683418-8683462)
[»] chr2 (32 HSPs)
chr2 (135-235)||(6766004-6766106)
chr2 (137-235)||(33198702-33198801)
chr2 (137-235)||(41528246-41528345)
chr2 (137-235)||(45660355-45660454)
chr2 (136-235)||(19264088-19264189)
chr2 (136-235)||(5963190-5963290)
chr2 (136-235)||(28858298-28858398)
chr2 (136-235)||(33677472-33677572)
chr2 (137-235)||(3201316-3201415)
chr2 (137-235)||(45085247-45085346)
chr2 (137-235)||(6110270-6110371)
chr2 (137-235)||(25572036-25572134)
chr2 (137-235)||(28599219-28599318)
chr2 (136-228)||(12938231-12938324)
chr2 (141-233)||(24204602-24204695)
chr2 (143-235)||(35517119-35517212)
chr2 (136-235)||(40584469-40584569)
chr2 (138-228)||(39696877-39696968)
chr2 (143-216)||(44454987-44455061)
chr2 (136-235)||(8701591-8701691)
chr2 (138-228)||(9864797-9864886)
chr2 (137-235)||(14873952-14874052)
chr2 (137-235)||(30421253-30421352)
chr2 (137-233)||(7645300-7645400)
chr2 (137-210)||(30830692-30830766)
chr2 (143-235)||(29524112-29524205)
chr2 (136-235)||(11617013-11617113)
chr2 (136-200)||(35022886-35022950)
chr2 (168-235)||(35115875-35115943)
chr2 (136-186)||(23987138-23987188)
chr2 (153-201)||(11031029-11031077)
chr2 (136-184)||(32427978-32428026)
[»] chr3 (48 HSPs)
chr3 (137-235)||(47864185-47864284)
chr3 (136-235)||(7866514-7866614)
chr3 (136-235)||(14752239-14752339)
chr3 (126-228)||(35963135-35963238)
chr3 (138-235)||(50651068-50651166)
chr3 (137-235)||(6438077-6438176)
chr3 (126-235)||(28875389-28875499)
chr3 (136-228)||(579176-579269)
chr3 (136-228)||(6075074-6075167)
chr3 (143-235)||(37042448-37042541)
chr3 (136-235)||(46711689-46711788)
chr3 (136-235)||(6752663-6752763)
chr3 (139-235)||(8703105-8703200)
chr3 (139-235)||(9054992-9055087)
chr3 (138-233)||(47866946-47867041)
chr3 (136-235)||(54464926-54465026)
chr3 (137-235)||(32619861-32619960)
chr3 (137-235)||(36546536-36546635)
chr3 (137-235)||(36561680-36561779)
chr3 (143-228)||(38674870-38674956)
chr3 (143-235)||(23311624-23311717)
chr3 (136-235)||(26208007-26208107)
chr3 (136-235)||(26725022-26725122)
chr3 (137-197)||(48802550-48802610)
chr3 (143-235)||(3972275-3972368)
chr3 (143-235)||(3997510-3997603)
chr3 (136-235)||(2927282-2927382)
chr3 (144-227)||(20847307-20847391)
chr3 (137-197)||(33974629-33974689)
chr3 (148-235)||(34722636-34722724)
chr3 (137-216)||(50730103-50730183)
chr3 (137-216)||(50782671-50782751)
chr3 (137-200)||(9264002-9264065)
chr3 (143-235)||(30189570-30189664)
chr3 (137-228)||(53270227-53270321)
chr3 (137-235)||(37074952-37075053)
chr3 (136-228)||(19464068-19464161)
chr3 (136-197)||(41476399-41476460)
chr3 (136-197)||(46557271-46557332)
chr3 (143-228)||(11054350-11054432)
chr3 (137-182)||(23910580-23910625)
chr3 (142-228)||(36509493-36509583)
chr3 (153-235)||(8097049-8097132)
chr3 (128-179)||(29235178-29235229)
chr3 (153-235)||(30454756-30454838)
chr3 (153-235)||(34194892-34194975)
chr3 (148-183)||(34722564-34722599)
chr3 (143-200)||(41936258-41936313)
[»] chr1 (51 HSPs)
chr1 (130-228)||(37735462-37735561)
chr1 (136-235)||(28120827-28120927)
chr1 (137-235)||(42965887-42965985)
chr1 (136-228)||(45226127-45226220)
chr1 (136-235)||(6785445-6785545)
chr1 (136-235)||(7468035-7468135)
chr1 (136-235)||(15959712-15959812)
chr1 (136-235)||(47600111-47600211)
chr1 (137-235)||(32624077-32624176)
chr1 (137-235)||(39555658-39555757)
chr1 (136-233)||(47014565-47014662)
chr1 (136-228)||(39932651-39932744)
chr1 (144-235)||(10558828-10558920)
chr1 (137-235)||(12449039-12449138)
chr1 (136-235)||(33369542-33369640)
chr1 (143-235)||(35691388-35691482)
chr1 (136-228)||(23392245-23392337)
chr1 (136-235)||(6786827-6786927)
chr1 (137-228)||(16854131-16854222)
chr1 (137-235)||(2126028-2126127)
chr1 (137-235)||(32983243-32983341)
chr1 (138-227)||(40718669-40718759)
chr1 (136-235)||(50369947-50370050)
chr1 (136-197)||(3875132-3875193)
chr1 (138-198)||(2246124-2246184)
chr1 (138-197)||(1820406-1820465)
chr1 (136-235)||(28016818-28016916)
chr1 (137-228)||(43667382-43667472)
chr1 (143-235)||(24190466-24190558)
chr1 (136-228)||(33431550-33431641)
chr1 (136-190)||(50012580-50012634)
chr1 (159-235)||(7876014-7876091)
chr1 (136-181)||(11241032-11241077)
chr1 (126-235)||(13136625-13136732)
chr1 (143-235)||(24728699-24728792)
chr1 (136-235)||(6787062-6787161)
chr1 (137-181)||(25391674-25391718)
chr1 (136-187)||(46542973-46543024)
chr1 (137-235)||(3861767-3861864)
chr1 (136-228)||(1034847-1034939)
chr1 (136-197)||(50665252-50665313)
chr1 (165-235)||(298741-298812)
chr1 (137-229)||(47302983-47303077)
chr1 (143-235)||(3076291-3076384)
chr1 (143-235)||(43765290-43765383)
chr1 (153-228)||(5858450-5858526)
chr1 (153-201)||(8889797-8889845)
chr1 (137-228)||(46818581-46818673)
chr1 (153-198)||(43359696-43359741)
chr1 (143-187)||(44148953-44148997)
chr1 (153-228)||(44510298-44510374)
[»] chr8 (35 HSPs)
chr8 (136-235)||(34890247-34890347)
chr8 (137-235)||(7858516-7858615)
chr8 (128-235)||(7499705-7499814)
chr8 (136-235)||(36190759-36190859)
chr8 (137-235)||(43216420-43216519)
chr8 (136-233)||(16879467-16879565)
chr8 (137-234)||(8107692-8107789)
chr8 (136-228)||(24892825-24892918)
chr8 (136-233)||(28348598-28348695)
chr8 (136-235)||(35456097-35456197)
chr8 (137-235)||(34158364-34158463)
chr8 (143-235)||(26483526-26483619)
chr8 (136-228)||(31734102-31734195)
chr8 (136-235)||(13143751-13143851)
chr8 (137-197)||(15824743-15824803)
chr8 (136-235)||(8711863-8711964)
chr8 (137-189)||(15958033-15958085)
chr8 (136-235)||(29920341-29920441)
chr8 (137-235)||(41086459-41086558)
chr8 (143-228)||(7022483-7022569)
chr8 (136-189)||(13144081-13144134)
chr8 (136-233)||(41755913-41756010)
chr8 (148-235)||(3642043-3642130)
chr8 (143-187)||(8709906-8709950)
chr8 (143-235)||(2052830-2052921)
chr8 (158-200)||(7670749-7670791)
chr8 (164-235)||(35525602-35525674)
chr8 (143-190)||(4047013-4047060)
chr8 (157-233)||(30575910-30575987)
chr8 (153-235)||(8673385-8673468)
chr8 (153-235)||(27819663-27819746)
chr8 (143-235)||(33563584-33563681)
chr8 (153-201)||(14576253-14576301)
chr8 (180-235)||(16358184-16358240)
chr8 (153-228)||(17713227-17713303)
[»] scaffold0442 (1 HSPs)
scaffold0442 (137-235)||(10035-10134)
[»] chr7 (31 HSPs)
chr7 (137-235)||(6191035-6191134)
chr7 (136-235)||(20123751-20123851)
chr7 (136-235)||(25944565-25944665)
chr7 (137-235)||(4910704-4910803)
chr7 (137-235)||(18102520-18102619)
chr7 (143-235)||(14805866-14805959)
chr7 (143-235)||(15252860-15252953)
chr7 (143-235)||(25737698-25737791)
chr7 (143-235)||(35923248-35923341)
chr7 (144-235)||(27810806-27810898)
chr7 (137-235)||(22632079-22632178)
chr7 (137-235)||(47557672-47557771)
chr7 (136-216)||(11780007-11780088)
chr7 (143-235)||(45485951-45486044)
chr7 (143-235)||(46760328-46760421)
chr7 (136-235)||(14574553-14574653)
chr7 (136-235)||(9158079-9158178)
chr7 (137-235)||(44682868-44682966)
chr7 (127-235)||(2610639-2610748)
chr7 (136-235)||(15995708-15995808)
chr7 (143-235)||(16917468-16917560)
chr7 (137-184)||(12633110-12633157)
chr7 (143-233)||(19912842-19912933)
chr7 (143-235)||(4237786-4237879)
chr7 (143-228)||(19492473-19492559)
chr7 (138-187)||(35068955-35069004)
chr7 (128-228)||(48413702-48413800)
chr7 (153-201)||(3777984-3778032)
chr7 (165-235)||(8015744-8015813)
chr7 (152-235)||(30082353-30082437)
chr7 (152-235)||(33153039-33153123)
[»] chr5 (35 HSPs)
chr5 (136-233)||(34425320-34425417)
chr5 (128-235)||(32110983-32111091)
chr5 (137-235)||(11261956-11262055)
chr5 (137-235)||(32017694-32017792)
chr5 (136-233)||(38280836-38280934)
chr5 (143-235)||(17351384-17351477)
chr5 (136-235)||(9957491-9957588)
chr5 (136-235)||(20644003-20644103)
chr5 (126-233)||(38130190-38130298)
chr5 (137-235)||(37562834-37562933)
chr5 (143-235)||(6686380-6686473)
chr5 (143-235)||(43590034-43590127)
chr5 (136-235)||(20039091-20039191)
chr5 (137-235)||(42273639-42273736)
chr5 (127-233)||(43454397-43454504)
chr5 (136-200)||(5984223-5984287)
chr5 (136-227)||(11858309-11858401)
chr5 (137-189)||(12730099-12730151)
chr5 (137-235)||(37522661-37522761)
chr5 (143-233)||(7071234-7071325)
chr5 (143-235)||(25840860-25840953)
chr5 (148-235)||(42104320-42104408)
chr5 (136-187)||(8225452-8225503)
chr5 (140-211)||(41625607-41625678)
chr5 (136-189)||(104341-104394)
chr5 (137-189)||(12792919-12792972)
chr5 (136-235)||(4463349-4463449)
chr5 (143-235)||(39505305-39505397)
chr5 (137-200)||(445997-446060)
chr5 (144-235)||(19413138-19413230)
chr5 (139-189)||(23233391-23233441)
chr5 (151-227)||(29493592-29493669)
chr5 (126-217)||(1238505-1238597)
chr5 (153-235)||(8959646-8959729)
chr5 (153-228)||(3463894-3463970)
[»] chr6 (12 HSPs)
chr6 (136-235)||(12461501-12461601)
chr6 (143-235)||(3095791-3095884)
chr6 (143-235)||(11082317-11082410)
chr6 (127-216)||(17751835-17751925)
chr6 (137-222)||(31107181-31107266)
chr6 (143-235)||(21542414-21542507)
chr6 (143-235)||(34177713-34177806)
chr6 (136-235)||(7274947-7275047)
chr6 (137-235)||(30794264-30794363)
chr6 (143-227)||(35129135-35129220)
chr6 (137-230)||(9428760-9428854)
chr6 (154-199)||(16870902-16870947)
[»] scaffold0009 (2 HSPs)
scaffold0009 (136-233)||(52676-52774)
scaffold0009 (143-235)||(157790-157883)
[»] scaffold0774 (1 HSPs)
scaffold0774 (139-235)||(3500-3597)
[»] scaffold0045 (1 HSPs)
scaffold0045 (137-235)||(77947-78046)
[»] scaffold0300 (1 HSPs)
scaffold0300 (143-235)||(645-738)
[»] scaffold0062 (1 HSPs)
scaffold0062 (136-228)||(44850-44943)
[»] scaffold0132 (2 HSPs)
scaffold0132 (136-235)||(1001-1101)
scaffold0132 (136-235)||(8961-9061)
[»] scaffold0111 (1 HSPs)
scaffold0111 (142-228)||(40174-40261)
[»] scaffold0018 (1 HSPs)
scaffold0018 (137-235)||(154851-154950)
[»] scaffold0005 (1 HSPs)
scaffold0005 (137-199)||(233596-233658)
[»] scaffold0012 (1 HSPs)
scaffold0012 (136-235)||(160239-160339)
[»] scaffold1786 (1 HSPs)
scaffold1786 (136-184)||(853-900)


Alignment Details
Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 1585521 - 1585412
Alignment:
Q  127 taagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  1585521 taagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgt 1585422  T
Q  226 tttaacatct 235  Q
    ||||||||||    
T  1585421 tttaacatct 1585412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 41414774 - 41414676
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||| |||||||||||||||| ||||||    
T  41414774 ttttgtttattcttataaaattaaatgcaaattacattcaattttttctctctttcattttttcataatcaatagccaataaaaattgtttttacatct 41414676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 17794706 - 17794606
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcc-attttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||  |||||||||||| |||| ||||||||||| |||||    
T  17794706 cttttgtttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatc 17794607  T
Q  235 t 235  Q
    |    
T  17794606 t 17794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 29203493 - 29203593
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||| |||||| |||| ||||||||||| |||||    
T  29203493 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 29203592  T
Q  235 t 235  Q
    |    
T  29203593 t 29203593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 5483443 - 5483343
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||| || ||| |||| ||||||||||| |||||    
T  5483443 cttttgtttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatc 5483344  T
Q  235 t 235  Q
    |    
T  5483343 t 5483343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 20716167 - 20716267
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| | ||||| |||||| |||| ||||||||||| |||||    
T  20716167 cttttgtttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatc 20716266  T
Q  235 t 235  Q
    |    
T  20716267 t 20716267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 14332748 - 14332847
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||| |||||| |||| | |||||||||||||||| ||||||    
T  14332748 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatct 14332847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 28669164 - 28669068
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacat 233  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||  ||||  |||| ||||||||||| ||||    
T  28669164 ttttgtttattctcataaaattaaatacaaattacattcaattttctctctctttcattttttcataactaataaccaatgaaaattgtttttacat 28669068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 35310907 - 35310807
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||||||||||||||| |||||||||  |||||||||| |||||||||||||||||||||| | ||||| |||||| |||| ||||||||||| |||||    
T  35310907 cttttgtttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatc 35310808  T
Q  235 t 235  Q
    |    
T  35310807 t 35310807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 20281579 - 20281678
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  20281579 ttttgtttattctcataaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 20281678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 25297386 - 25297287
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||  ||||||| ||||||| |||||||||||| |||| ||||||||||| ||||||    
T  25297386 ttttgcttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatct 25297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 26916313 - 26916412
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | | |||| |||||| | ||||| |||||| |||||||||||||||| ||||||    
T  26916313 ttttgtttattctcataaaattaaatgcaaattacattcaattttatttttctttcattttttccataaccaatagccaataaaaattgtttttacatct 26916412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 56318234 - 56318135
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||| ||||||  ||| ||||||||||| ||||||    
T  56318234 ttttgtttattatcataaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatct 56318135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 47867873 - 47867966
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  47867873 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 47867966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 4058702 - 4058802
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| | ||||| |||||  |||| ||||||||||| |||||    
T  4058702 cttttatttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatc 4058801  T
Q  235 t 235  Q
    |    
T  4058802 t 4058802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 32323426 - 32323327
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| ||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||| |||||    
T  32323426 cttttgcttattatcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatc 32323328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 39078144 - 39078244
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||| || ||||  ||||| |||| ||||||||||| |||||    
T  39078144 cttttgtttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatc 39078243  T
Q  235 t 235  Q
    |    
T  39078244 t 39078244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 50080615 - 50080527
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattg 224  Q
    ||||| |||||| ||| |||||||||| |||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||    
T  50080615 ttttgcttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattg 50080527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 5815474 - 5815556
Alignment:
Q  154 aaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||  ||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||| ||||||    
T  5815474 aaattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatct 5815556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 2229241 - 2229334
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||| |||||||| ||||||||||||||||||| | |||| |||||| | ||||| |||||| |||||||||||||||| ||||||    
T  2229241 ttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatct 2229334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 52535750 - 52535657
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||| || |||| |||||| |||| |||||| ||||    
T  52535750 cttttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttt 52535657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 35529660 - 35529759
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||| |||||||| |||||| | ||||| |||||  |||| ||||||||||| ||||||    
T  35529660 ttttgtttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatct 35529759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 55580656 - 55580757
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct--cataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||| |||| |||||| |  |||||  ||||| |||| ||||||||||| ||||    
T  55580656 cttttgtttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacat 55580755  T
Q  234 ct 235  Q
    ||    
T  55580756 ct 55580757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 10069684 - 10069784
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||  | |||| || ||||  ||||| |||||| |||| ||||||||||| |||||    
T  10069684 cttttgtttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatc 10069783  T
Q  235 t 235  Q
    |    
T  10069784 t 10069784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 50145723 - 50145823
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||||| |||| |||| ||||||||||  ||||||||| ||||||| |||||||||||||||| ||| |||||||| |||| |||||||| || |||||    
T  50145723 cttttgtatattttcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatc 50145822  T
Q  235 t 235  Q
    |    
T  50145823 t 50145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 24940365 - 24940452
Alignment:
Q  149 tcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||| |||||  |||  ||||||||||| ||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatct 24940452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 14583717 - 14583779
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct 199  Q
    ||||| |||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||    
T  14583717 ttttgcttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttct 14583779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 16604983 - 16604911
Alignment:
Q  164 aaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||| | |||||  ||||| |||| ||||||||||||||||||    
T  16604983 aaaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatct 16604911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 42915523 - 42915617
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct--cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||  ||||| |  ||||| |||| | |||| ||||||||||| ||||||    
T  42915523 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatct 42915617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 7654632 - 7654697
Alignment:
Q  164 aaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||||||||||||||| |||| |||||| | |||||||||||| |||| |||||||||||    
T  7654632 aaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttt 7654697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 48793784 - 48793693
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| |||||||||| |||||||||||| ||   |||| |||||| |||| | |||| ||||||||||| ||||||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaattttctctct-tttatttttttcataaccaattgccaatgaaaattgtttttacatct 48793693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 8178387 - 8178304
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||| | |||||||||| ||||||||| ||||||||| |||| |||||  ||||| |||||||||| ||||||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatct 8178304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 19351833 - 19351927
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaa-ttttctctctcttccatt-ttctcataatcaatagtcaataaaaattgtttt 228  Q
    |||||| ||||| | || |||||||||| ||||||||||||| |||||||||| ||||||| || ||||||  ||||| |||| |||||||||||    
T  19351833 cttttgcttattttgatgaaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttt 19351927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 21722831 - 21722783
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctc 184  Q
    ||||||||||||||||| |||||||||  |||||||||| |||||||||    
T  21722831 cttttgtttattctcatgaaattaaatacaaattacatttaattttctc 21722783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 32280151 - 32280104
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctc 184  Q
    ||||| |||||||||| ||| |||||| ||||||||||||||||||||    
T  32280151 ttttgcttattctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 8683462 - 8683418
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctct 187  Q
    |||||||||| |||||||||  |||||||||| ||||||||||||    
T  8683462 ttattctcatgaaattaaatacaaattacatttaattttctctct 8683418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 6766106 - 6766004
Alignment:
Q  135 gcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct--cataatcaatagtcaataaaaattgttttaaca 232  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||| |||    
T  6766106 gcttttgtttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttaca 6766007  T
Q  233 tct 235  Q
    |||    
T  6766006 tct 6766004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 33198801 - 33198702
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||  |||| ||||||||||| ||||||    
T  33198801 ttttgtttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatct 33198702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 41528246 - 41528345
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  41528246 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 41528345  T

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Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 45660355 - 45660454
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||| ||||| |||||| |||| ||||||||||| ||||||    
T  45660355 ttttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatct 45660454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 19264088 - 19264189
Alignment:
Q  136 cttttgtttattctcataaaattaaatg-aaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| | ||||| |||||| |||| ||||||||||| ||||    
T  19264088 cttttgtttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacat 19264187  T
Q  234 ct 235  Q
    ||    
T  19264188 ct 19264189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 5963190 - 5963290
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||| |||||||| || | |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| |||| |||||    
T  5963190 cttttctttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc 5963289  T
Q  235 t 235  Q
    |    
T  5963290 t 5963290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 28858298 - 28858398
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  | |||| |||||| |||| |||||| |||| |||||    
T  28858298 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatc 28858397  T
Q  235 t 235  Q
    |    
T  28858398 t 28858398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 33677472 - 33677572
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||||||||||||||| ||||||||||  ||| |||||||||||||| ||||||| ||||||| ||||| ||||||||||| ||||||||||| |||||    
T  33677472 cttttgtttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatc 33677571  T
Q  235 t 235  Q
    |    
T  33677572 t 33677572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 3201316 - 3201415
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  3201316 ttttgtttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 3201415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 45085247 - 45085346
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||| |||| |  ||| ||||||||||| ||||||    
T  45085247 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatct 45085346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 6110371 - 6110270
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctct--ctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |||||| | ||||| |||||| |||| ||||||||||| ||||    
T  6110371 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacat 6110272  T
Q  234 ct 235  Q
    ||    
T  6110271 ct 6110270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 25572036 - 25572134
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||  ||||| |||||  |||| ||||||||||| ||||||    
T  25572036 ttttgcttattctcatgaaattaaatgcaaattacatttaattttctctctcttccatttttccataaccaatatccaatgaaaattgtttttacatct 25572134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 28599318 - 28599219
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| |||| |||||| | ||||| |||||| |||| |||||| |||| ||||||    
T  28599318 ttttgtttattctcataaaattaaatgcatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatct 28599219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 12938231 - 12938324
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||||| |||||||||| ||||||||||||  ||| ||||||||  ||||||| |||||||||||| |||| |||||||||||    
T  12938231 cttttgtttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttt 12938324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 24204695 - 24204602
Alignment:
Q  141 gtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||| |||||| |||||| |||| ||||||| ||| ||||    
T  24204695 gtttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacat 24204602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 35517119 - 35517212
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| |||||| |||| ||||||    
T  35517119 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatct 35517212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 40584569 - 40584469
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||||||||||| || ||||| ||||| ||| |  |||| ||||||||||| |||||    
T  40584569 cttttgtttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatc 40584470  T
Q  235 t 235  Q
    |    
T  40584469 t 40584469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 39696968 - 39696877
Alignment:
Q  138 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||  |||||||||| |||||||||| |||||||||| |||||||||||||| || ||||||||  ||| |||||||||||    
T  39696968 tttgtttattctcacgaaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 44454987 - 44455061
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaat 216  Q
    |||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||| ||||||||||| ||||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaat 44455061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 8701591 - 8701691
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| || ||||||| |||||||||  ||||| |||| |||||||||||||||||||||| | ||||| |||||| |||| ||||||||||| |||||    
T  8701591 cttttgcttgttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatc 8701690  T
Q  235 t 235  Q
    |    
T  8701691 t 8701691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 9864886 - 9864797
Alignment:
Q  138 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||| |||||||||| |||||||||| ||||||||||||||||  | ||||||||||||||| |||||||||| | |||| |||||||||||    
T  9864886 tttgcttattctcatgaaattaaatgcaaattacattcaattt--tatctcttccattttctccataatcaattgccaatgaaaattgtttt 9864797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 14873952 - 14874052
Alignment:
Q  137 ttttgtttattctcataaaatt-aaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||||||||||||||| |||| ||||| |||||||||| |||||| |||||||| |||||||| ||||| |||||| |||| |||||| |||| |||||    
T  14873952 ttttgtttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatc 14874051  T
Q  235 t 235  Q
    |    
T  14874052 t 14874052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 30421352 - 30421253
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||| |||| || |||| | | ||| |||| || |||||||||||||| ||||||    
T  30421352 ttttgtttattcttataaaattaaatgtaaattacatttaattttctctttctttcatttttttaaaaattaataatcgataaaaattgtttttacatct 30421253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 7645400 - 7645300
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctctt---ccattttct-cataatcaatagtcaataaaaattgttttaaca 232  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||| |  |   ||||||||| |||||| ||||| |||| ||||||||||| |||    
T  7645400 ttttgtttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttaca 7645301  T
Q  233 t 233  Q
    |    
T  7645300 t 7645300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 30830766 - 30830692
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaata 210  Q
    ||||| |||||||||| |||||||||| ||||||||| ||||||||||||| || ||||||||| ||||||||||    
T  30830766 ttttgattattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaata 30830692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 29524205 - 29524112
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||  ||||| | ||||| |||| | |||| ||||||||||| ||||||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatct 29524112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 11617013 - 11617113
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| ||||| ||||||||| ||||| ||||| ||||||||||||||||||||  |||||  | |||| |||||| |||| ||||||||||| |||||    
T  11617013 cttttgcttattttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatc 11617112  T
Q  235 t 235  Q
    |    
T  11617113 t 11617113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 35022886 - 35022950
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc 200  Q
    |||||||||  |||||| |||||||||| |||||  |||||||||||||||||| ||||||||||    
T  35022886 cttttgttttatctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctc 35022950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 35115943 - 35115875
Alignment:
Q  168 ttacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||   ||| ||||||||||| ||||||    
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattgtttttacatct 35115875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 23987188 - 23987138
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctc 186  Q
    |||||||||||||| ||||||||||||| |||||  ||||||| |||||||    
T  23987188 cttttgtttattcttataaaattaaatgtaaattgaattcaatcttctctc 23987138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 11031077 - 11031029
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctca 201  Q
    ||||||||||| ||| | |||||||||| ||||||||| ||||||||||    
T  11031077 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctca 11031029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 32427978 - 32428026
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctc 184  Q
    ||||||||||||||  | |||||||||  ||||||||||||||||||||    
T  32427978 cttttgtttattcttgttaaattaaatataaattacattcaattttctc 32428026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 47864185 - 47864284
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  47864185 ttttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatct 47864284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 7866614 - 7866514
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| | ||||| ||||||||||| ||||||||||| |||||    
T  7866614 cttttgtttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatc 7866515  T
Q  235 t 235  Q
    |    
T  7866514 t 7866514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 14752339 - 14752239
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||| ||||||||||| ||||||||||| |||||    
T  14752339 cttttctttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatc 14752240  T
Q  235 t 235  Q
    |    
T  14752239 t 14752239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 35963135 - 35963238
Alignment:
Q  126 ctaagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattg 224  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||||| ||||| |||||  ||||||||||||    
T  35963135 ctaagaaatacttttgtttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattg 35963234  T
Q  225 tttt 228  Q
    ||||    
T  35963235 tttt 35963238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 50651166 - 50651068
Alignment:
Q  138 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||| ||||||||||| ||||||||||| ||||||    
T  50651166 tttgattattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatct 50651068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 6438077 - 6438176
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||| ||||| |||||| |||| ||||||||||| ||||||    
T  6438077 ttttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatct 6438176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 28875389 - 28875499
Alignment:
Q  126 ctaagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattg 224  Q
    ||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||| | |||| |||||||| ||||| |||||| |||| |||||||    
T  28875389 ctaagaaaaacttttgtttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattg 28875488  T
Q  225 ttttaacatct 235  Q
    |||| ||||||    
T  28875489 tttttacatct 28875499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 579269 - 579176
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||| |||||| |||| |||||||||||    
T  579269 cttttgtttaatctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttt 579176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 6075074 - 6075167
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||| |||| | |||| |||||||||||    
T  6075074 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttt 6075167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 37042541 - 37042448
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | |||||||||||| |||| ||||||||||| ||||||    
T  37042541 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatct 37042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 46711788 - 46711689
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||| ||||||||||||||  ||||||||||||| |||||||||||| |||||| |||||| |||||| |||| || |||||||| ||||||    
T  46711788 cttttgtttattttcataaaattaaatacaaattacattcaaatttctctctctttcattttttcataaccaatagccaatgaatattgtttttacatct 46711689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 6752663 - 6752763
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| ||||| |||| |||||||||| |||||||||||| ||| |||||||||||||||||| ||||| |||||| |||| ||||||||||| |||||    
T  6752663 cttttgcttattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatc 6752762  T
Q  235 t 235  Q
    |    
T  6752763 t 6752763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 8703105 - 8703200
Alignment:
Q  139 ttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||  |||||||||||| ||||  |||||||||| ||||||    
T  8703105 ttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttttccataatcaatagccaat-gaaattgtttttacatct 8703200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 9054992 - 9055087
Alignment:
Q  139 ttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||  |||||||||||| ||||  |||||||||| ||||||    
T  9054992 ttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttttccataatcaatagccaat-gaaattgtttttacatct 9055087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 47867041 - 47866946
Alignment:
Q  138 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| |||| ||||| ||||| ||||    
T  47867041 tttgcttattctcataaa-ttaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacat 47866946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 54465026 - 54464926
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| || ||||  ||||| |||||| |||  ||||||||||| |||||    
T  54465026 cttttgtttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatc 54464927  T
Q  235 t 235  Q
    |    
T  54464926 t 54464926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 32619960 - 32619861
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||| ||||| ||||| |||||| |||| |||||| |||| ||||||    
T  32619960 ttttgtttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatct 32619861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 36546536 - 36546635
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||||| |||||| || |||| |||||| |||| ||||||| ||| ||||||    
T  36546536 ttttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatct 36546635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 36561779 - 36561680
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||||| |||||| || |||| |||||| |||| ||||||| ||| ||||||    
T  36561779 ttttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatct 36561680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 38674870 - 38674956
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgtttt 228  Q
    ||||||| || |||||||||  |||||| ||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  38674870 ttattcttatgaaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttt 38674956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 23311717 - 23311624
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  23311717 ttattctcataaaattaaatgtatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 23311624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 26208007 - 26208107
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| ||||||||||||| | |||||  |||||||||||||||||||| ||||||||||||| || ||| ||||| |||| ||||||||||| |||||    
T  26208007 cttttgcttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatc 26208106  T
Q  235 t 235  Q
    |    
T  26208107 t 26208107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 26725122 - 26725022
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||| ||||||||||| |||||| ||| |||||||||||| |||| ||||||||| ||||||| |||||||||||  |||| ||||||||||| |||||    
T  26725122 cttttatttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatc 26725023  T
Q  235 t 235  Q
    |    
T  26725022 t 26725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 48802610 - 48802550
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccatttt 197  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  48802610 ttttgtttattctcataaaagtaaatgcaaattacattcaattttctctctctttcatttt 48802550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 3972275 - 3972368
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||||| || ||| ||||||  ||| ||||||||||| ||||||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatct 3972368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 3997603 - 3997510
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||||| || ||| ||||||  ||| ||||||||||| ||||||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatct 3997510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 2927282 - 2927382
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| |||||||||| |||||||||  |||||||||| |||||||||||||||| | |||| |||||| |||||| |||| |||||| |||| |||||    
T  2927282 cttttgcttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatc 2927381  T
Q  235 t 235  Q
    |    
T  2927382 t 2927382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 20847391 - 20847307
Alignment:
Q  144 tattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttt 227  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||| |||||||| ||||||||||   |||| ||||||||||    
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgttt 20847307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 33974689 - 33974629
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccatttt 197  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||    
T  33974689 ttttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttt 33974629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 34722724 - 34722636
Alignment:
Q  148 ctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||||||| ||||||||||||||||||||||  || |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatct 34722636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 50730103 - 50730183
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaat 216  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||  ||||| | ||||| |||||||||||    
T  50730103 ttttgtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaat 50730183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 50782751 - 50782671
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaat 216  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||  ||||| | ||||| |||||||||||    
T  50782751 ttttgtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaat 50782671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 9264002 - 9264065
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc 200  Q
    ||||||||||||||||||||||||||| |||||||||  |||||| |||||||| |||||||||    
T  9264002 ttttgtttattctcataaaattaaatgcaaattacatctaattttatctctctttcattttctc 9264065  T

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Target: chr3; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 30189570 - 30189664
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct--cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||| |||||||||||| |||||||||||||| |||||| |||| |||||| |  ||||| |||||| |||| ||||||||||| ||||||    
T  30189570 ttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatct 30189664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 53270227 - 53270321
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttc--tctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||  |||||||| |||||| | ||||| |||||| |||| |||||| ||||    
T  53270227 ttttgtttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattatttt 53270321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 37074952 - 37075053
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattt--tctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacat 233  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  || |||| || |||||| || |||| |||||| |||| |||||||| || ||||    
T  37074952 ttttgtttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacat 37075051  T
Q  234 ct 235  Q
    ||    
T  37075052 ct 37075053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 19464068 - 19464161
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||||||||||||| | ||||| ||||||||||||| ||| |||||||| || ||||| ||||| ||||| | ||| |||||||||||    
T  19464068 cttttgtttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttt 19464161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 41476460 - 41476399
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccatttt 197  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| || ||| ||||||    
T  41476460 cttttgtttattctcataaaattaaatgcaaattagattcaattttctttccctttcatttt 41476399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 46557332 - 46557271
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccatttt 197  Q
    |||||| |||||||||| |||||||||| |||||||||| ||||||||||||||| ||||||    
T  46557332 cttttgcttattctcatgaaattaaatgtaaattacatttaattttctctctctttcatttt 46557271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 11054432 - 11054350
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||||||||| |||||||||||||||||||||   |||  ||||  ||||| |||||| |||| |||||||||||    
T  11054432 ttattctcataaaattaaatgcaaattacattcaattttctct---ttcattttttccataaccaatagccaatgaaaattgtttt 11054350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 23910625 - 23910580
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttc 182  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  23910625 ttttgtttattctcatataattaaatgcaaattacattcaattttc 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 36509583 - 36509493
Alignment:
Q  142 tttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-----tcataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||| || |||||||     | |||||||||||  |||||||||||||||    
T  36509583 tttattctcatcaaattaaatgtaaattacattcgattttctctct-tttcattttctttatttataatcaatagcaaataaaaattgtttt 36509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 8097132 - 8097049
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||| | |||||||||| ||||||||| ||||||||| |||| |||||  |||| |||||| |||| ||||||    
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatct 8097049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 29235178 - 29235229
Alignment:
Q  128 aagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaatt 179  Q
    |||||||  ||||||||||| |||| |||||||||| |||||||||||||||    
T  29235178 aagaaatttttttgtttattatcattaaattaaatgtaaattacattcaatt 29235229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 30454838 - 30454756
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||| | |||||||||| ||||||||| ||||||||| |||| |||||  |||| ||||||||||| ||||||    
T  30454838 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatct 30454756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 34194892 - 34194975
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||| | |||||| ||| ||||||||| ||||||||| |||| |||||  |||| ||||||||||| ||||||    
T  34194892 aaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatct 34194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 183
Target Start/End: Original strand, 34722564 - 34722599
Alignment:
Q  148 ctcataaaattaaatgaaaattacattcaattttct 183  Q
    |||||||||||||||| |||||||||||||||||||    
T  34722564 ctcataaaattaaatgcaaattacattcaattttct 34722599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 41936313 - 41936258
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc 200  Q
    |||||||||| ||| |||||| ||||| ||||||||||||||||||  ||||||||||    
T  41936313 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctc 41936258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 37735561 - 37735462
Alignment:
Q  130 gaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  37735561 gaaaagcttttgtttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttt 37735462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 28120927 - 28120827
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||||||| |||||    
T  28120927 cttttgtttattcacataaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatc 28120828  T
Q  235 t 235  Q
    |    
T  28120827 t 28120827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 42965985 - 42965887
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||  ||||| |||||| |||| ||||||||||| ||||||    
T  42965985 ttttgtttattcttataaaattaaatgcaaattacattcaattttctctctctttcatttttccataaccaatagccaatgaaaattgtttttacatct 42965887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 45226127 - 45226220
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| | ||||| ||||||||||| |||||||||||    
T  45226127 cttttgtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttt 45226220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 6785445 - 6785545
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| | ||||| |||||| |||| ||||||||||| |||||    
T  6785445 cttttgtttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 6785544  T
Q  235 t 235  Q
    |    
T  6785545 t 6785545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 7468135 - 7468035
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || ||||||| |||||||||| |||| |||||||| || |||||    
T  7468135 cttttgtttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatc 7468036  T
Q  235 t 235  Q
    |    
T  7468035 t 7468035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 15959812 - 15959712
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | ||||| |||||| |||| ||||||||||| |||||    
T  15959812 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatc 15959713  T
Q  235 t 235  Q
    |    
T  15959712 t 15959712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 47600211 - 47600111
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || |||| |||||| |||||| |||| ||||||||||| |||||    
T  47600211 cttttgtttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatc 47600112  T
Q  235 t 235  Q
    |    
T  47600111 t 47600111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 32624176 - 32624077
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||| |||| | |||| ||||||||||| ||||||    
T  32624176 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatct 32624077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 39555757 - 39555658
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  39555757 ttttgtttattctcataaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatct 39555658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 47014662 - 47014565
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| | ||||| ||||||||||| ||||||||||| ||||    
T  47014662 cttttgtttattctcataaaattaaatgtaaa-tacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacat 47014565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 39932744 - 39932651
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||| ||| | |||||| ||||||||||||||||    
T  39932744 cttttgtttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttt 39932651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 10558920 - 10558828
Alignment:
Q  144 tattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||| |||||||||| |||||||||| |||||| ||||||||||||||||| |||||||||||| |||| ||||||||||| ||||||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatct 10558828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 12449138 - 12449039
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | ||||| |||| | |||| ||||||||||| ||||||    
T  12449138 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatct 12449039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 33369542 - 33369640
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||  ||||| |||||| |||| ||||||||||| ||||||    
T  33369542 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctct-ttcattttttccataaccaatagccaatgaaaattgtttttacatct 33369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 35691388 - 35691482
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct--cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| |  ||||| |||||| |||||||||||||||| ||||||    
T  35691388 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatct 35691482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 23392337 - 23392245
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||||||||||| ||||| ||||||||||| |||||| ||||    
T  23392337 cttttgtttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattatttt 23392245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 6786827 - 6786927
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| | ||||| |||||| |||| |||||||| || |||||    
T  6786827 cttttgtttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatc 6786926  T
Q  235 t 235  Q
    |    
T  6786927 t 6786927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 16854131 - 16854222
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||||||| |||||||||||||||||| |||||||||| |||||| |||||||| |||||||| ||||| |||||| ||||||||||||||||    
T  16854131 ttttgttt-ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttt 16854222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 2126028 - 2126127
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  2126028 ttttgttcattctcattaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 2126127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 32983341 - 32983243
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| | ||||| |||| | |||| ||||||||||| ||||||    
T  32983341 ttttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatct 32983243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 40718669 - 40718759
Alignment:
Q  138 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttt 227  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| || || | |||||| |||| ||||||||||    
T  40718669 tttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgttt 40718759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 50369947 - 50370050
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaa----aattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaac 231  Q
    ||||| |||||||||||||||||||||  |    ||||||||||||||||||||||||| |||||| |||||| |||||| ||||| |||||||||| ||    
T  50369947 cttttttttattctcataaaattaaatacaaattaattacattcaattttctctctctttcattttttcataaccaatagccaatagaaattgtttttac 50370046  T
Q  232 atct 235  Q
    ||||    
T  50370047 atct 50370050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 3875193 - 3875132
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccatttt 197  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  3875193 cttttgtttattctcataaaattaaatgcaaatttcattcaattttctctctctttcatttt 3875132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 2246184 - 2246124
Alignment:
Q  138 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc 198  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||    
T  2246184 tttgtttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttc 2246124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 1820406 - 1820465
Alignment:
Q  138 tttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccatttt 197  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  1820406 tttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttt 1820465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 28016916 - 28016818
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| ||   |||| | |||| |||||| |||| ||||||||||| ||||||    
T  28016916 cttttgtttattctcataaaattaaatgcaagttacattcaattttctctct-tttattttttttataaccaatagccaatgaaaattgtttttacatct 28016818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 43667472 - 43667382
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||  ||||| |||| | |||| |||||||||||    
T  43667472 ttttgtttattctcataaaattaaatgtaaattacattcaattttctctct-ttcattttttccataaccaatggccaatgaaaattgtttt 43667382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 24190466 - 24190558
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  24190466 ttattctcataaaattaaatgcaaattacatt-aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 24190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 33431550 - 33431641
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||||||||||||||| ||||  |||||||||| |||||  |||||||| ||||||||| |||| |||||| |||| |||||||||||    
T  33431550 cttttgtttattctcataaaatgaaatacaaattacatttaattt--tctctctttcattttctctataaccaatagccaatgaaaattgtttt 33431641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 50012580 - 50012634
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctctt 190  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  50012580 cttttgtttattcttataaaattaaatgcaaattacattcaattttctttctctt 50012634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 7876091 - 7876014
Alignment:
Q  159 aaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||| ||||||||||||||||||||||||||  ||||| | ||||| |||||||||||||||||| |||| ||||||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatct 7876014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 11241032 - 11241077
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaatttt 181  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  11241032 cttttgtttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 13136732 - 13136625
Alignment:
Q  126 ctaagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgt 225  Q
    ||||||||  |||||||||||||| ||||||||||||| |||||| |||||||||||||||| |||  ||||  ||||| |||||| ||||  |||||||    
T  13136732 ctaagaaaaacttttgtttattct-ataaaattaaatgcaaattatattcaattttctctct-ttcattttttccataaccaatagccaatggaaattgt 13136635  T
Q  226 tttaacatct 235  Q
    ||| ||||||    
T  13136634 ttttacatct 13136625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 24728792 - 24728699
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||| | |||||||||| |||||||||| |||||||||||||||  ||||| | |||||||||| | |||| ||||||||||| ||||||    
T  24728792 ttattctcgtgaaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatct 24728699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 6787161 - 6787062
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||| ||||||||| ||||| |||||| ||| ||||||||| |||||||||||| |||||| | ||||| |||||| ||||||||||| |||| |||||    
T  6787161 cttttatttattctcgtaaaaataaatgcaaactacattcaa-tttctctctctttcattttttccataaccaatagccaataaaaattatttttacatc 6787063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 25391674 - 25391718
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaatttt 181  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  25391674 ttttgtttattctcataaaattaaatgcaaattacattcaatttt 25391718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 46542973 - 46543024
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctct 187  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  46542973 cttttgtttattctcataaaattaaatgcaaattgcatttaattttctctct 46543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 3861864 - 3861767
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||| |||||||| ||||||||||||| |||||| ||| |||||| ||||  |||  |||| ||||||||||||| |||| ||||||||||| ||||||    
T  3861864 ttttttttattcttataaaattaaatgcaaattatatttaatttt-tctcctttcatttttttcataatcaatagccaatgaaaattgtttttacatct 3861767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 1034847 - 1034939
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||| | |||| || ||||||||  ||| |||||||| || |||||||||||    
T  1034847 cttttgtttattctcatgaaattaaatgcgaattacattcaatttt-tttctcatctattttctctgtaaccaatagtcgatgaaaattgtttt 1034939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 50665252 - 50665313
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccatttt 197  Q
    |||||| |||||||||| ||||||| || |||||||||| ||||||||||||||| ||||||    
T  50665252 cttttgcttattctcatgaaattaattgcaaattacatttaattttctctctctttcatttt 50665313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 298812 - 298741
Alignment:
Q  165 aaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||||| |||| |||||  |||| ||||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatct 298741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 47303077 - 47302983
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttct-ctctcttccattttct-cataatcaatagtcaataaaaattgtttta 229  Q
    ||||| |||||||||| |||||||||| |||||||||||| ||||||  | | || |||||||| |||||||||||| |||| |||||| |||||    
T  47303077 ttttgcttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaattatttta 47302983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 3076291 - 3076384
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| |||||||||| ||||||||||| |||  ||||| | ||||| |||| | |||| |||||| |||| ||||||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatct 3076384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 43765290 - 43765383
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||  |||||| ||| |||||| |||||||||||| ||||||||||||||| |||||  ||||  |||| |||| |||||| ||||||    
T  43765290 ttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatct 43765383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 5858526 - 5858450
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||| ||| | |||||||||| |||||| || ||||||||| |||| |||||| |||| |||||||||||    
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttt 5858450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 8889845 - 8889797
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctca 201  Q
    ||||||||||| ||| | |||||||||||||||||||| ||||||||||    
T  8889845 aaaattaaatgtaaagtgcattcaattttctctctctttcattttctca 8889797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 46818673 - 46818581
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||| |||||||||||||||||||||  ||||||| |||| |||||||||  || |||||||| |||||  | ||| |||| |||||||||||    
T  46818673 ttttatttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttt 46818581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 43359696 - 43359741
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttc 198  Q
    ||||||||||| ||| |||||||||||| ||||||||| |||||||    
T  43359696 aaaattaaatgcaaagtacattcaatttgctctctctttcattttc 43359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 44148997 - 44148953
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctct 187  Q
    |||||||||| |||||||||| ||||||| || ||||||||||||    
T  44148997 ttattctcatgaaattaaatgcaaattacgtttaattttctctct 44148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 44510374 - 44510298
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||| ||| | |||||||||| |||||  || ||||||||| |||||||||  ||||| |||||||||||    
T  44510374 aaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttt 44510298  T

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Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 34890347 - 34890247
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||| |||||| |||| ||||||||||| |||||    
T  34890347 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 34890248  T
Q  235 t 235  Q
    |    
T  34890247 t 34890247  T

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Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 7858516 - 7858615
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| | |||||||||| |||||| ||||||||||| ||||||    
T  7858516 ttttgtttattctcataaaattaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatct 7858615  T

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Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 7499705 - 7499814
Alignment:
Q  128 aagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct--cataatcaatagtcaataaaaattgt 225  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |  ||||| |||||| |||| ||||||||    
T  7499705 aagaaatttttttgtttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgt 7499804  T
Q  226 tttaacatct 235  Q
    ||| ||||||    
T  7499805 ttttacatct 7499814  T

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Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 36190759 - 36190859
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | ||||| |||||| |||| ||||||||||| |||||    
T  36190759 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatc 36190858  T
Q  235 t 235  Q
    |    
T  36190859 t 36190859  T

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Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 43216519 - 43216420
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||| ||||| ||||||| ||| ||||||||||| ||||||    
T  43216519 ttttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatct 43216420  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 16879565 - 16879467
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||||||| || |||||||||  ||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| ||||    
T  16879565 cttttgtttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacat 16879467  T

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Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 8107789 - 8107692
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||   ||||| |||||| |||| ||||||||||| |||||    
T  8107789 ttttttttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttatccataaccaatagccaatgaaaattgtttttacatc 8107692  T

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Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 24892825 - 24892918
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| | ||||| |||||| |||| |||||||||||    
T  24892825 cttttgtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttt 24892918  T

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Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 28348598 - 28348695
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacat 233  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||| |||||| ||||  |||||||||| ||||    
T  28348598 ctttggtttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttccataaccaatagccaatggaaattgtttttacat 28348695  T

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Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 35456197 - 35456097
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||  ||||| | |||||| ||||| |||| ||||||||||| |||||    
T  35456197 cttttgtttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatc 35456098  T
Q  235 t 235  Q
    |    
T  35456097 t 35456097  T

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Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 34158463 - 34158364
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctc-ttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||   |||| |||||| ||||||||||| ||||||||||| ||||||    
T  34158463 ttttgtttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatct 34158364  T

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Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 26483526 - 26483619
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||| |||||| | |||||||||||| |||| ||||||||||| ||||||    
T  26483526 ttattctcgtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatct 26483619  T

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Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 31734102 - 31734195
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| | ||||  |||||| |||| |||||||||||    
T  31734102 cttttgtttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttt 31734195  T

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Target: chr8; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 13143751 - 13143851
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| || || ||| || |||| ||||||||||| |||||    
T  13143751 cttttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatc 13143850  T
Q  235 t 235  Q
    |    
T  13143851 t 13143851  T

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Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 15824803 - 15824743
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccatttt 197  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  15824803 ttttgtttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttt 15824743  T

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Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 8711863 - 8711964
Alignment:
Q  136 cttttgtttattctcataaaa-ttaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||| | ||||| |||||| |||| |||||| |||| ||||    
T  8711863 cttttgtttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacat 8711962  T
Q  234 ct 235  Q
    ||    
T  8711963 ct 8711964  T

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Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 15958085 - 15958033
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctct 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15958085 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctct 15958033  T

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Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 29920441 - 29920341
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| |||||||||| |||||||||   ||||||||||||||||| |||||||| ||||| | |||||||||||| |||| ||||||||||| |||||    
T  29920441 cttttgcttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatc 29920342  T
Q  235 t 235  Q
    |    
T  29920341 t 29920341  T

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Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 41086558 - 41086459
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||  ||||| | ||| | |||||| |||| ||||||||||| ||||||    
T  41086558 ttttgtttattctcataaaattaaatgcaaattacattgaattttctctctgttttattttttccattaccaatagccaatgaaaattgtttttacatct 41086459  T

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Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 7022569 - 7022483
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| |||||| ||||    
T  7022569 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttt 7022483  T

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Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 13144134 - 13144081
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctct 189  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13144134 cttttgtttattttcataaaattaaatgcaaattacattcaattttctctctct 13144081  T

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Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 41755913 - 41756010
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||| |||||||| ||||||  ||||| ||||| ||||| || ||| |||| ||||    
T  41755913 cttttgtttattatcatgaaattaaatgtaaattacattcaattttttctctctttcatttttccataagcaataatcaatgaacattatttttacat 41756010  T

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Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 3642130 - 3642043
Alignment:
Q  148 ctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| ||||| |||||||||||||||||||||||||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatct 3642043  T

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Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 8709950 - 8709906
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctct 187  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctctct 8709906  T

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Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 2052830 - 2052921
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctca-taatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| |||||||||||||||||||||||  || ||||||||  ||  |||||| |||| ||||||||||| ||||||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctctct--tctattttctccctagccaatagccaatgaaaattgtttttacatct 2052921  T

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Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 7670749 - 7670791
Alignment:
Q  158 taaatgaaaattacattcaattttctctctcttccattttctc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  7670749 taaatgaaaattacattcaattttctctctattccattttctc 7670791  T

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Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 35525602 - 35525674
Alignment:
Q  164 aaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| |||||||||||||||  ||||| || |||| ||||||||||| ||||||||||| ||||||    
T  35525602 aaaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatct 35525674  T

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Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 4047060 - 4047013
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctctt 190  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctctt 4047013  T

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Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 30575987 - 30575910
Alignment:
Q  157 ttaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    ||||||| ||||||| || ||||||||||||||| |||||| | ||||| |||||| |||| ||||||||||| ||||    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacat 30575910  T

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Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 8673385 - 8673468
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||| |||||||||||| |||||| || ||||||||| ||||||||    |||| ||||||||||| ||||||    
T  8673385 aaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatct 8673468  T

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Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 27819663 - 27819746
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||| |||||| ||||| ||||| |||  |||||||| |||| ||||| |||||||||| |||||| ||||||    
T  27819663 aaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatct 27819746  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 33563681 - 33563584
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctct--tccattttct-cataatc--aatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||| | |||||||||||||| | ||||||||  |||||||||| ||||| |  ||| |||||| ||||||||||| ||||||    
T  33563681 ttattctcatgaaattaaacgtaaattacattcaatctcctctctcttctccattttctgcataaccaaaatggtcaatgaaaattgtttttacatct 33563584  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 14576301 - 14576253
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctca 201  Q
    ||||||||||| ||| | |||||||||| ||||||||| ||||||||||    
T  14576301 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctca 14576253  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 16358240 - 16358184
Alignment:
Q  180 ttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| |||||| | ||||||||||||||||| ||||||| ||| ||||||    
T  16358240 ttctctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatct 16358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 17713227 - 17713303
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||| ||| | |||||||| | |||||||||||||||| || |||| |||||  |||| |||||||||||    
T  17713227 aaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttt 17713303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 10035 - 10134
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| | ||||| ||||||||||| ||||||||||| ||||||    
T  10035 ttttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatct 10134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 6191035 - 6191134
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||| |||||| |||| ||||||||||| ||||||    
T  6191035 ttttgtttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatct 6191134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 20123851 - 20123751
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| | ||||| |||||| |||| ||||||||||| |||||    
T  20123851 cttttgtttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatc 20123752  T
Q  235 t 235  Q
    |    
T  20123751 t 20123751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 25944565 - 25944665
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | ||||| |||| | |||| ||||||||||| |||||    
T  25944565 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatc 25944664  T
Q  235 t 235  Q
    |    
T  25944665 t 25944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 4910803 - 4910704
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| |||||||| |||||| | |||||||||||| |||| |||||| |||| ||||||    
T  4910803 ttttgtttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatct 4910704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 18102520 - 18102619
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| | ||||| |||| | |||| ||||||||||| ||||||    
T  18102520 ttttgtttattctcataaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatct 18102619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 14805866 - 14805959
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  14805866 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 14805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 15252860 - 15252953
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  15252860 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 15252953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 25737791 - 25737698
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  25737791 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 25737698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 35923248 - 35923341
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  35923248 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 35923341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 27810898 - 27810806
Alignment:
Q  144 tattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||  ||||||||||  |||||||||||||||| ||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatct 27810806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 22632079 - 22632178
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||||| | ||||| |||||  |||| ||||||||||| ||||||    
T  22632079 ttttgcttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatct 22632178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 47557771 - 47557672
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||| |||||| |||||| | |||||| ||||| |||| ||||||||||| ||||||    
T  47557771 ttttgtttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatct 47557672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 11780007 - 11780088
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaat 216  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||||| |||||||||||| ||||||  ||||||||||    
T  11780007 cttttgtttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaat 11780088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 45485951 - 45486044
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| |||||| |||| ||||||    
T  45485951 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatct 45486044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 46760421 - 46760328
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  46760421 ttattctcataaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 46760328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 14574553 - 14574653
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| ||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||| |||||| |||||| ||||  ||||| |||| |||||    
T  14574553 cttttgcttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatc 14574652  T
Q  235 t 235  Q
    |    
T  14574653 t 14574653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 9158079 - 9158178
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||| | |||||| |||||| |||||| |||| | |||  ||||||||||| ||||||    
T  9158079 cttttgtttattcttataaaattaaatgcaaattacattcaaatttttttctctttcattttttcataaccaatggccaaagaaaattgtttttacatct 9158178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 44682868 - 44682966
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||||||| ||||||| || ||||||||| ||||||||| | |||| |||||   ||||| ||||||||||| ||||||||||| ||||||    
T  44682868 ttttgtttattctcatgaaattaattgcaaattacatccaattttctatatctttcatttctccataaccaatagtcaatgaaaattgtttttacatct 44682966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 2610748 - 2610639
Alignment:
Q  127 taagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgt 225  Q
    |||||||  ||||||||||||||||| ||||||| || |||||||||||||||||   ||||||||||||||| ||||| |||||| |||  |||| |||    
T  2610748 taagaaaaacttttgtttattctcatgaaattaagtgcaaattacattcaatttttcttctcttccattttctccataaccaatagccaaagaaaaatgt 2610649  T
Q  226 tttaacatct 235  Q
    ||| ||||||    
T  2610648 ttttacatct 2610639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 15995708 - 15995808
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| ||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||| |||||| |||||  ||||  ||||| |||| |||||    
T  15995708 cttttgcttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatc 15995807  T
Q  235 t 235  Q
    |    
T  15995808 t 15995808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 16917468 - 16917560
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||| |||| |||||||||| ||||||| ||||||||||||| | | |||||||| ||||| ||||||| ||| ||||||||||| ||||||    
T  16917468 ttattttcattaaattaaatgcaaattactttcaattttctctatttcccattttcacataaccaatagttaatgaaaattgtttttacatct 16917560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 12633157 - 12633110
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctc 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12633157 ttttgtttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 19912933 - 19912842
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||  |||| ||||||||||| ||||    
T  19912933 ttattctcatgaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacat 19912842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 4237879 - 4237786
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||| ||||||||||||| |||||| |||||||| | | |||||||||||||| || |||||||||| |||| |||||| |||| ||||||    
T  4237879 ttattctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacatct 4237786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 19492559 - 19492473
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    |||||| ||| |||||||||  |||||| |||||||||||| ||||||| ||||||| ||||| ||| |||| ||||||||||||||    
T  19492559 ttattcgcatgaaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattgtttt 19492473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 35069004 - 35068955
Alignment:
Q  138 tttgtttattctcataaaattaaatgaaaattacattcaattttctctct 187  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  35069004 tttgtttattctcataatattaaatgcaaattacattcaattttttctct 35068955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 48413702 - 48413800
Alignment:
Q  128 aagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtt 226  Q
    |||||| || |||| ||| | |||| |||||||||| |||||| ||||||||||||||||  || |||||||| |||| ||||||||||| |||||||||    
T  48413702 aagaaaagcgtttgcttagtgtcatgaaattaaatgcaaatta-attcaattttctctct--tctattttctccataaccaatagtcaatgaaaattgtt 48413798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 3777984 - 3778032
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctca 201  Q
    ||||||||||||||| | |||||||||| || |||||| ||||||||||    
T  3777984 aaaattaaatgaaaagtgcattcaatttgctttctctttcattttctca 3778032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 8015813 - 8015744
Alignment:
Q  165 aaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||| |||||||||||||||||  | |||||| || ||||||||||  |||||||||||||||| ||||||    
T  8015813 aaattgcattcaattttctctct--tgcattttttctataatcaataaccaataaaaattgtttttacatct 8015744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 30082353 - 30082437
Alignment:
Q  152 taaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||| ||||| ||||||||||  ||||| ||| ||| ||| |||||||| ||  |||||| ||||||||| ||||||    
T  30082353 taaaattaaatgcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaattgtttttacatct 30082437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 33153039 - 33153123
Alignment:
Q  152 taaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||| ||||| ||||||||||  ||||  ||| ||||||| |||||||| ||  |||||| ||||||||| ||||||    
T  33153039 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattgtttttacatct 33153123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 6e-27; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 34425320 - 34425417
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||  |||||  |||||||||||| |||| ||||||||||| ||||    
T  34425320 cttttgtttattctcataaaattaaatgcaaattatattcaattttctctctcttttatttttccataatcaatagccaatgaaaattgtttttacat 34425417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 32110983 - 32111091
Alignment:
Q  128 aagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccat-tttctcataatcaatagtcaataaaaattgtt 226  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||  ||||| ||||||||||| |||||||||    
T  32110983 aagaaatttttttgtttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtt 32111082  T
Q  227 ttaacatct 235  Q
    || ||||||    
T  32111083 tttacatct 32111091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 11262055 - 11261956
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  11262055 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 11261956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 32017694 - 32017792
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| | ||||  ||||| |||||| |||| ||||||||||| ||||||    
T  32017694 ttttgtttattctcataaaattaaatgcaaattacattcaactttctctctctttcgtttttccataaccaatagacaatgaaaattgtttttacatct 32017792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 38280836 - 38280934
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| | |||||||||||  |||| ||||||||||| ||||    
T  38280836 cttttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacat 38280934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 17351384 - 17351477
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||| |||| ||||||||||| ||||||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatct 17351477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 9957588 - 9957491
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  |||||||| |||||| |||||| |||||| |||| ||||||||||| ||||||    
T  9957588 cttttgtttattctcataaaattaaatgcaaattacattcaactt--tctctctttcattttttcataaccaatagccaatgaaaattgtttttacatct 9957491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 20644003 - 20644103
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |||||| | ||||| |||||| |||| ||||||||||| |||||    
T  20644003 cttttgtttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 20644102  T
Q  235 t 235  Q
    |    
T  20644103 t 20644103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 38130298 - 38130190
Alignment:
Q  126 ctaagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattg 224  Q
    ||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| | ||||| |||||| |||| ||||||     
T  38130298 ctaagaaaaacttttgtttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaatta 38130199  T
Q  225 ttttaacat 233  Q
    |||| ||||    
T  38130198 tttttacat 38130190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 37562933 - 37562834
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| ||||||  ||| ||||||||||| ||||||    
T  37562933 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagctaatgaaaattgtttttacatct 37562834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 6686380 - 6686473
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  6686380 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 6686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 43590127 - 43590034
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  43590127 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 43590034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 20039091 - 20039191
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||| ||||||||||||||||||| |||||||||| |||||||| |||||| || |||| |||||| |||||| |||||||||||| ||| |||||    
T  20039091 cttttgttaattctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatc 20039190  T
Q  235 t 235  Q
    |    
T  20039191 t 20039191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 42273639 - 42273736
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||  |||||||| |||||||| ||||| |||||| |||| ||||||||||| ||||||    
T  42273639 ttttgtttattctcataaaattaaatgcaaattgcattcaattt--tctctctttcattttctccataaccaatagccaatgaaaattgtttttacatct 42273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 43454504 - 43454397
Alignment:
Q  127 taagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttc-tcataatcaatagtcaataaaaattgt 225  Q
    |||||||  |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||  |||||| || ||| ||||||| ||| ||||||||    
T  43454504 taagaaaaacttttgtttaatctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgt 43454405  T
Q  226 tttaacat 233  Q
    ||| ||||    
T  43454404 ttttacat 43454397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 5984287 - 5984223
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc 200  Q
    |||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  5984287 cttttgtttattctcataaaattaaatgtaaattacattaaatattctctctctttcattttctc 5984223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 11858309 - 11858401
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttt 227  Q
    ||||||||||||||||| || ||||||  ||||||| ||||||||| ||||| ||||||||||| |||||||||||  |||||||||||||||    
T  11858309 cttttgtttattctcatgaacttaaatacaaattacgttcaattttttctcttttccattttctccataatcaataaccaataaaaattgttt 11858401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 12730151 - 12730099
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctct 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12730151 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctct 12730099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 37522761 - 37522661
Alignment:
Q  137 ttttgtttattctcataaaa-ttaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| |||||    
T  37522761 ttttgtctattctcataaaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatc 37522662  T
Q  235 t 235  Q
    |    
T  37522661 t 37522661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 7071234 - 7071325
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||||||| |||||||||  |||||||||||||||||| | |||||||||||||| | ||||||||||||||| |||||| |||| ||||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacat 7071325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 25840860 - 25840953
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||  ||||| | ||||| |||| |||||| ||||||||||| ||||||    
T  25840860 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatct 25840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 42104408 - 42104320
Alignment:
Q  148 ctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||| |||||||||| ||| ||||||||||||| || |||||||||||||| |||||| ||||| |||| ||||||||||| ||||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatct 42104320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 8225452 - 8225503
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctct 187  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  8225452 cttttgtttattctcataaaattaaatgcaaattacgttcaattttctctct 8225503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 41625678 - 41625607
Alignment:
Q  140 tgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatag 211  Q
    |||||||| |||| |||||||||  |||||||||| ||||||| |||||||||||||| |||||||||||||    
T  41625678 tgtttattttcatgaaattaaattcaaattacatttaattttccctctcttccattttttcataatcaatag 41625607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 104394 - 104341
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctct 189  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||||||||    
T  104394 cttttgtctattctcataaaattaaatgcatattacattcaattttctctctct 104341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 12792972 - 12792919
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattt-tctctctct 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  12792972 ttttgtttattctcataaaattaaatgcaaattacattcaatttctctctctct 12792919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 4463349 - 4463449
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| |||| ||||| ||||||| || |||||||||| ||||||||||||||| |||||| | ||||| |||||| || | ||||||||||| |||||    
T  4463349 cttttgcttatactcatgaaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatc 4463448  T
Q  235 t 235  Q
    |    
T  4463449 t 4463449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 39505397 - 39505305
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctcataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||  |||||  |||||  ||| | |||| ||||||||||| ||||||    
T  39505397 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttccataacgaattgccaatgaaaattgtttttacatct 39505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 446060 - 445997
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc 200  Q
    |||| |||||| |||| |||||||||||||||| ||||||||||| |||||||| |||||||||    
T  446060 ttttttttattatcatgaaattaaatgaaaattgcattcaattttttctctctttcattttctc 445997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 19413138 - 19413230
Alignment:
Q  144 tattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||| |||||||||| |||||||||| ||||||| |||||||  ||||| || |||| |||| | |||| ||||||||||| ||||||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatct 19413230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 23233391 - 23233441
Alignment:
Q  139 ttgtttattctcataaaattaaatgaaaattacattcaattttctctctct 189  Q
    |||||||||||||||||| |||||| ||||||||||||| | |||||||||    
T  23233391 ttgtttattctcataaaaataaatgcaaattacattcaactctctctctct 23233441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 29493669 - 29493592
Alignment:
Q  151 ataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttt 227  Q
    |||||||| |||| |||||| ||||||||| | |||||| | |||||||| |||| ||||| ||||||||||||||||    
T  29493669 ataaaattgaatgcaaattatattcaatttacactctctcctattttctccataaccaataatcaataaaaattgttt 29493592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 1238505 - 1238597
Alignment:
Q  126 ctaagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaata 217  Q
    ||||||||  |||||  ||||||| |||||||||||   ||||||||||||||||||| ||||  |||||||||| |||| |||||| |||||    
T  1238505 ctaagaaaaacttttacttattcttataaaattaaaaacaaattacattcaattttctttctcccccattttctctataaccaataggcaata 1238597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 8959646 - 8959729
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||| ||| | | |||||||| |||||| |||||||||||| ||||||||   ||||| ||||||||||| ||||||    
T  8959646 aaaattaaatgtaaagtgcgttcaatttgctctcttttccattttctctataatcaactatcaatgaaaattgtttttacatct 8959729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 3463970 - 3463894
Alignment:
Q  153 aaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||| ||| | |||||||||| |||||| || ||||||||| ||||||||    ||||||||||||||||    
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttt 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 12461601 - 12461501
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||| ||||| |||||| |||| ||||||||||| |||||    
T  12461601 cttttgtttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatc 12461502  T
Q  235 t 235  Q
    |    
T  12461501 t 12461501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 3095884 - 3095791
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| | || |||||| | |||||||||||| |||| ||||||||||| ||||||    
T  3095884 ttattctcataaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatct 3095791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 11082410 - 11082317
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  11082410 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 11082317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 17751925 - 17751835
Alignment:
Q  127 taagaaatgcttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaat 216  Q
    |||||||  |||||||||||||| || ||| |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  17751925 taagaaaaacttttgtttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaat 17751835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 31107181 - 31107266
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaat 222  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||| |||||| || ||||||||||||||||||||||    
T  31107181 ttttgtttattcttataaaattaaatgcaaattacattcaa-tttctttctctttcattttttctataatcaatagtcaataaaaat 31107266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 21542414 - 21542507
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||||| |||||||| ||||||||||||||||||| | |||| |||||| | ||||| |||||| |||||||||||||||| ||||||    
T  21542414 ttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatct 21542507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 34177806 - 34177713
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  34177806 ttattctcataaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 34177713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 7275047 - 7274947
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| |||||||||| |||||||||  |||||||||| ||||||||||||||| |||||| | ||||| |||||| |||| ||||||||||| |||||    
T  7275047 cttttgcttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 7274948  T
Q  235 t 235  Q
    |    
T  7274947 t 7274947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 30794363 - 30794264
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||| ||||||||||| |||||||||| |||||| ||| |||||||||||||||| ||||||| ||| | |||||| |||| |||| |||||| ||||||    
T  30794363 ttttttttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatct 30794264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 35129220 - 35129135
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttt 227  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||| |||||| | ||||| |||||  |||| ||||||||||    
T  35129220 ttattctcgtaaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgttt 35129135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 9428760 - 9428854
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgttttaa 230  Q
    |||||||||||||||||||||| |||| |||||| ||| |||||||||||||||  ||||| || |||| |||||| |||| ||| || ||||||    
T  9428760 ttttgtttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaattttttttaa 9428854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 16870947 - 16870902
Alignment:
Q  154 aaattaaatgaaaattacattcaattttctctctcttccattttct 199  Q
    ||||||||||||||||||||||| ||| ||||| ||| ||||||||    
T  16870947 aaattaaatgaaaattacattcattttgctctccctttcattttct 16870902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 52774 - 52676
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacat 233  Q
    |||||| ||||| |||| ||||||||||  ||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||    
T  52774 cttttgcttattttcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacat 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 157790 - 157883
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||  ||||| | ||||| |||| | |||| ||||||||||| ||||||    
T  157790 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatct 157883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 3597 - 3500
Alignment:
Q  139 ttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| | ||||| |||||| |||| |||||| |||| ||||||    
T  3597 ttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatct 3500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 77947 - 78046
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||| |||||| | ||||| |||| | |||| ||||||||||| ||||||    
T  77947 ttttgtttattctcataaaattaaatgtaaattacattcaattttcactttctttcattttttccataaccaatggccaatgaaaattgtttttacatct 78046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 738 - 645
Alignment:
Q  143 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| | ||||| |||||| |||| ||||||||||| ||||||    
T  738 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 44943 - 44850
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||| |||||| | ||||| |||||| |||| |||||||||||    
T  44943 cttttgtttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttt 44850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 1001 - 1101
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||| ||||| |||||| | ||||| ||||| ||||| |||| |||||| |||||    
T  1001 cttttgtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatc 1100  T
Q  235 t 235  Q
    |    
T  1101 t 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 8961 - 9061
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||| ||||| |||||| | ||||| ||||| ||||| |||| |||||| |||||    
T  8961 cttttgtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatc 9060  T
Q  235 t 235  Q
    |    
T  9061 t 9061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 40174 - 40261
Alignment:
Q  142 tttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctc-ataatcaatagtcaataaaaattgtttt 228  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||| |||||||| || |||| |||||| |||| |||||||||||    
T  40174 tttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttt 40261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 154851 - 154950
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct-cataatcaatagtcaataaaaattgttttaacatct 235  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||| |||| |||||| | ||||| |||||| ||||  |||||||||| ||||||    
T  154851 ttttttttattctcataaaattaaatgcaaattacattaaattttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatct 154950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 233658 - 233596
Alignment:
Q  137 ttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttct 199  Q
    ||||| |||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||    
T  233658 ttttgcttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttct 233596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 160239 - 160339
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttcca-ttttctcataatcaatagtcaataaaaattgttttaacatc 234  Q
    |||||| ||||||| || |||||||||  ||||||||||||||||||||| ||||||| ||||| ||||| |||||| |||| |||| || ||| |||||    
T  160239 cttttgcttattcttatgaaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatc 160338  T
Q  235 t 235  Q
    |    
T  160339 t 160339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 853 - 900
Alignment:
Q  136 cttttgtttattctcataaaattaaatgaaaattacattcaattttctc 184  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  853 cttttgtttattctcatgaaattaaatgcaaattacatt-aattttctc 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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