View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_112 (Length: 344)

Name: NF9839A_low_112
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_112
NF9839A_low_112
[»] chr2 (28 HSPs)
chr2 (16-324)||(22045904-22046212)
chr2 (16-324)||(25356174-25356482)
chr2 (16-324)||(12858-13166)
chr2 (16-324)||(27626256-27626564)
chr2 (16-324)||(24170002-24170304)
chr2 (16-112)||(25368865-25368961)
chr2 (133-273)||(25372337-25372477)
chr2 (16-264)||(17867294-17867551)
chr2 (35-195)||(25146054-25146208)
chr2 (16-112)||(26192866-26192962)
chr2 (135-264)||(24821486-24821615)
chr2 (203-271)||(25369016-25369084)
chr2 (15-106)||(116384-116475)
chr2 (209-259)||(23160851-23160901)
chr2 (209-259)||(23572108-23572158)
chr2 (209-259)||(27630195-27630245)
chr2 (16-76)||(24821347-24821407)
chr2 (16-68)||(25372229-25372281)
chr2 (209-259)||(116220-116270)
chr2 (202-259)||(16774345-16774402)
chr2 (202-259)||(24796764-24796821)
chr2 (38-78)||(27770067-27770107)
chr2 (41-112)||(27630381-27630452)
chr2 (41-107)||(16774536-16774602)
chr2 (41-112)||(23160644-23160715)
chr2 (41-112)||(23571901-23571972)
chr2 (16-103)||(24501210-24501296)
chr2 (41-107)||(24796564-24796630)
[»] chr7 (30 HSPs)
chr7 (16-324)||(8716526-8716834)
chr7 (16-324)||(18286287-18286595)
chr7 (16-324)||(14549758-14550066)
chr7 (16-324)||(16466859-16467167)
chr7 (16-324)||(13656595-13656903)
chr7 (18-310)||(48803105-48803397)
chr7 (16-273)||(824331-824597)
chr7 (16-273)||(20106977-20107246)
chr7 (16-264)||(15064474-15064731)
chr7 (180-273)||(15921409-15921502)
chr7 (16-110)||(15918013-15918107)
chr7 (16-107)||(13672736-13672827)
chr7 (202-264)||(16150972-16151034)
chr7 (209-264)||(16761252-16761307)
chr7 (209-264)||(16530728-16530783)
chr7 (209-264)||(16634879-16634934)
chr7 (202-259)||(13672545-13672602)
chr7 (39-112)||(16530918-16530991)
chr7 (39-112)||(16634671-16634744)
chr7 (39-112)||(16761058-16761131)
chr7 (202-259)||(18594738-18594795)
chr7 (202-259)||(18616889-18616946)
chr7 (16-112)||(16150747-16150843)
chr7 (16-103)||(5396024-5396111)
chr7 (16-103)||(8783332-8783419)
chr7 (16-103)||(16327010-16327097)
chr7 (16-103)||(23513964-23514051)
chr7 (41-103)||(13741317-13741379)
chr7 (41-107)||(18594538-18594604)
chr7 (41-107)||(18617080-18617146)
[»] chr5 (34 HSPs)
chr5 (16-324)||(15734196-15734504)
chr5 (16-324)||(25008027-25008335)
chr5 (16-324)||(23746713-23747021)
chr5 (16-324)||(20620825-20621133)
chr5 (16-324)||(22318728-22319035)
chr5 (16-277)||(22947128-22947401)
chr5 (35-273)||(21387011-21387258)
chr5 (16-112)||(30760886-30760982)
chr5 (183-264)||(18071594-18071675)
chr5 (183-264)||(20597290-20597371)
chr5 (183-264)||(20603587-20603668)
chr5 (183-264)||(20609906-20609987)
chr5 (16-112)||(26846541-26846637)
chr5 (208-263)||(23520623-23520678)
chr5 (38-112)||(20439430-20439504)
chr5 (202-264)||(20792252-20792314)
chr5 (202-259)||(20439633-20439690)
chr5 (209-264)||(25117622-25117677)
chr5 (209-264)||(25176713-25176768)
chr5 (15-112)||(25117389-25117486)
chr5 (15-112)||(25176480-25176577)
chr5 (202-259)||(24954646-24954703)
chr5 (203-264)||(26846350-26846411)
chr5 (16-112)||(18071785-18071881)
chr5 (16-103)||(18487294-18487381)
chr5 (16-103)||(22827990-22828077)
chr5 (41-107)||(24954446-24954512)
chr5 (16-112)||(20792027-20792123)
chr5 (16-100)||(21282141-21282225)
chr5 (16-103)||(23601871-23601958)
chr5 (16-103)||(24939426-24939513)
chr5 (16-76)||(20597084-20597144)
chr5 (16-76)||(20603381-20603441)
chr5 (214-258)||(30764587-30764631)
[»] chr3 (34 HSPs)
chr3 (16-324)||(7599018-7599326)
chr3 (16-324)||(15630200-15630508)
chr3 (16-324)||(13137413-13137721)
chr3 (16-324)||(13188661-13188969)
chr3 (16-322)||(16374723-16375029)
chr3 (16-324)||(12188319-12188627)
chr3 (16-324)||(12194733-12195041)
chr3 (16-324)||(10145673-10145981)
chr3 (16-324)||(13196673-13196981)
chr3 (17-277)||(3278167-3278439)
chr3 (16-151)||(13689502-13689637)
chr3 (16-273)||(17386458-17386726)
chr3 (16-264)||(13693589-13693849)
chr3 (16-273)||(20157697-20157966)
chr3 (24-273)||(14446817-14447075)
chr3 (16-273)||(4369375-4369644)
chr3 (38-259)||(3340485-3340718)
chr3 (38-107)||(13505781-13505850)
chr3 (183-258)||(22165754-22165829)
chr3 (38-112)||(15945489-15945563)
chr3 (183-264)||(10603983-10604064)
chr3 (135-264)||(12161466-12161595)
chr3 (183-264)||(16654400-16654481)
chr3 (16-112)||(12161308-12161404)
chr3 (209-259)||(13505991-13506041)
chr3 (209-259)||(15945276-15945326)
chr3 (202-259)||(10161657-10161714)
chr3 (202-259)||(15643767-15643824)
chr3 (16-103)||(3246747-3246834)
chr3 (202-264)||(12423817-12423879)
chr3 (16-112)||(22165548-22165644)
chr3 (41-107)||(10161457-10161523)
chr3 (39-112)||(16654591-16654664)
chr3 (16-112)||(10603777-10603873)
[»] chr8 (23 HSPs)
chr8 (16-324)||(21380755-21381063)
chr8 (16-324)||(22100869-22101177)
chr8 (16-324)||(8324095-8324403)
chr8 (16-324)||(8313130-8313438)
chr8 (16-324)||(22034774-22035082)
chr8 (16-324)||(21954741-21955049)
chr8 (16-324)||(22097885-22098193)
chr8 (16-324)||(16419844-16420152)
chr8 (200-324)||(17132461-17132585)
chr8 (16-273)||(22289741-22289995)
chr8 (16-264)||(21942698-21942958)
chr8 (16-273)||(11348192-11348458)
chr8 (16-264)||(22368670-22368927)
chr8 (133-273)||(22830603-22830743)
chr8 (141-263)||(21100218-21100340)
chr8 (16-115)||(21100057-21100156)
chr8 (16-112)||(19766371-19766467)
chr8 (38-259)||(21826100-21826333)
chr8 (183-264)||(19766180-19766261)
chr8 (202-264)||(29333294-29333356)
chr8 (16-112)||(29333484-29333580)
chr8 (16-70)||(22831958-22832012)
chr8 (16-103)||(20001194-20001281)
[»] chr4 (11 HSPs)
chr4 (16-324)||(22109622-22109930)
chr4 (16-324)||(15253007-15253316)
chr4 (38-259)||(15261352-15261585)
chr4 (16-112)||(3353491-3353587)
chr4 (16-273)||(15864206-15864475)
chr4 (202-264)||(3353302-3353364)
chr4 (202-259)||(13821597-13821654)
chr4 (16-103)||(11497844-11497931)
chr4 (16-103)||(15349075-15349162)
chr4 (16-111)||(18290908-18291003)
chr4 (41-107)||(13821788-13821854)
[»] chr6 (20 HSPs)
chr6 (16-324)||(24856488-24856796)
chr6 (117-324)||(8725346-8725553)
chr6 (16-315)||(18010519-18010816)
chr6 (20-264)||(18446918-18447174)
chr6 (17-112)||(25966518-25966613)
chr6 (16-112)||(21561694-21561790)
chr6 (15-103)||(23518981-23519069)
chr6 (209-264)||(21561926-21561981)
chr6 (16-91)||(30672990-30673065)
chr6 (16-103)||(19586818-19586905)
chr6 (41-103)||(29685447-29685509)
chr6 (202-259)||(20017709-20017766)
chr6 (202-259)||(22167024-22167081)
chr6 (208-259)||(22768605-22768656)
chr6 (41-107)||(20017509-20017575)
chr6 (41-107)||(22166824-22166890)
chr6 (16-104)||(11218491-11218579)
chr6 (16-100)||(17818415-17818499)
chr6 (16-103)||(22062742-22062829)
chr6 (202-259)||(20168921-20168978)
[»] chr1 (16 HSPs)
chr1 (16-324)||(20236143-20236451)
chr1 (16-277)||(19876918-19877191)
chr1 (16-273)||(8651726-8651994)
chr1 (16-263)||(20072176-20072435)
chr1 (182-273)||(8948863-8948954)
chr1 (209-259)||(20392180-20392230)
chr1 (16-112)||(3988962-3989058)
chr1 (38-105)||(20392373-20392440)
chr1 (202-264)||(3988792-3988854)
chr1 (16-73)||(8948796-8948853)
chr1 (135-264)||(19783716-19783845)
chr1 (202-259)||(21800143-21800200)
chr1 (54-114)||(16383575-16383635)
chr1 (16-103)||(21785674-21785761)
chr1 (16-103)||(27045763-27045850)
chr1 (41-107)||(21799943-21800009)
[»] scaffold0473 (1 HSPs)
scaffold0473 (16-324)||(12700-13008)
[»] scaffold0577 (1 HSPs)
scaffold0577 (16-287)||(4805-5076)
[»] scaffold1571 (1 HSPs)
scaffold1571 (16-286)||(1322-1592)
[»] scaffold0020 (2 HSPs)
scaffold0020 (16-324)||(115309-115616)
scaffold0020 (16-324)||(119613-119920)
[»] scaffold0216 (1 HSPs)
scaffold0216 (16-324)||(10079-10387)
[»] scaffold0375 (1 HSPs)
scaffold0375 (16-324)||(11191-11499)
[»] scaffold1620 (1 HSPs)
scaffold1620 (16-315)||(239-532)
[»] scaffold1879 (1 HSPs)
scaffold1879 (16-315)||(166-459)
[»] scaffold0116 (1 HSPs)
scaffold0116 (16-324)||(38984-39286)
[»] scaffold0402 (1 HSPs)
scaffold0402 (16-264)||(6596-6856)
[»] scaffold0091 (1 HSPs)
scaffold0091 (147-315)||(54912-55080)
[»] scaffold0117 (2 HSPs)
scaffold0117 (16-163)||(32822-32968)
scaffold0117 (184-310)||(32965-33091)
[»] scaffold0974 (1 HSPs)
scaffold0974 (16-109)||(1-94)
[»] scaffold0231 (1 HSPs)
scaffold0231 (16-261)||(21631-21888)
[»] scaffold0037 (2 HSPs)
scaffold0037 (16-264)||(44144-44404)
scaffold0037 (16-264)||(51533-51793)
[»] scaffold0026 (2 HSPs)
scaffold0026 (16-273)||(132331-132597)
scaffold0026 (16-103)||(17253-17340)
[»] scaffold0215 (2 HSPs)
scaffold0215 (141-263)||(8390-8512)
scaffold0215 (16-115)||(8228-8328)
[»] scaffold0833 (1 HSPs)
scaffold0833 (239-324)||(4620-4705)
[»] scaffold0059 (2 HSPs)
scaffold0059 (180-273)||(10848-10941)
scaffold0059 (180-273)||(18849-18942)
[»] scaffold0013 (1 HSPs)
scaffold0013 (180-273)||(234457-234550)
[»] scaffold1095 (2 HSPs)
scaffold1095 (178-264)||(1986-2072)
scaffold1095 (16-109)||(2153-2246)
[»] scaffold0156 (1 HSPs)
scaffold0156 (16-264)||(7738-7998)
[»] scaffold0346 (2 HSPs)
scaffold0346 (35-111)||(4854-4930)
scaffold0346 (204-273)||(5035-5104)
[»] scaffold0004 (3 HSPs)
scaffold0004 (16-264)||(19219-19479)
scaffold0004 (204-264)||(253240-253300)
scaffold0004 (16-78)||(253129-253191)
[»] scaffold0022 (2 HSPs)
scaffold0022 (15-107)||(24449-24541)
scaffold0022 (209-259)||(24258-24308)
[»] scaffold0506 (2 HSPs)
scaffold0506 (135-264)||(3443-3572)
scaffold0506 (16-112)||(3300-3396)
[»] scaffold0273 (1 HSPs)
scaffold0273 (183-264)||(24041-24122)
[»] scaffold0142 (2 HSPs)
scaffold0142 (183-264)||(22443-22524)
scaffold0142 (16-112)||(22237-22333)
[»] scaffold0029 (2 HSPs)
scaffold0029 (183-264)||(122063-122144)
scaffold0029 (16-112)||(122246-122342)
[»] scaffold0018 (2 HSPs)
scaffold0018 (135-264)||(19652-19781)
scaffold0018 (16-76)||(19513-19573)
[»] scaffold0525 (1 HSPs)
scaffold0525 (16-264)||(850-1110)
[»] scaffold0146 (2 HSPs)
scaffold0146 (16-112)||(21756-21852)
scaffold0146 (208-264)||(21566-21622)
[»] scaffold0230 (2 HSPs)
scaffold0230 (202-264)||(12164-12226)
scaffold0230 (16-112)||(12355-12451)
[»] scaffold0078 (2 HSPs)
scaffold0078 (38-112)||(29368-29442)
scaffold0078 (209-259)||(29197-29247)
[»] scaffold0080 (1 HSPs)
scaffold0080 (264-324)||(50261-50321)
[»] scaffold0075 (1 HSPs)
scaffold0075 (264-324)||(32320-32380)
[»] scaffold0051 (2 HSPs)
scaffold0051 (40-112)||(25655-25727)
scaffold0051 (211-264)||(25859-25912)
[»] scaffold0056 (1 HSPs)
scaffold0056 (240-315)||(41700-41775)
[»] scaffold0032 (1 HSPs)
scaffold0032 (16-112)||(90158-90254)
[»] scaffold0566 (1 HSPs)
scaffold0566 (16-103)||(1503-1590)
[»] scaffold0012 (2 HSPs)
scaffold0012 (16-103)||(8503-8590)
scaffold0012 (16-103)||(12675-12762)
[»] scaffold0035 (1 HSPs)
scaffold0035 (16-103)||(51778-51865)
[»] scaffold0220 (1 HSPs)
scaffold0220 (16-101)||(9556-9641)


Alignment Details
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 22045904 - 22046212
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22045904 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 22046003  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22046004 gtcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 22046103  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22046104 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 22046203  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  22046204 tcttaatga 22046212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 25356482 - 25356174
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25356482 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 25356383  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25356382 gtcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 25356283  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25356282 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 25356183  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  25356182 tcttaatga 25356174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 12858 - 13166
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  12858 ggacatcatttattagcccggataattcaacaccttgtctttgttgctcggtgcttattctttgtacctcggtttgcatccatgcccatctttcattgtt 12957  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12958 gtcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 13057  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13058 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 13157  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  13158 tcttaatga 13166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 27626564 - 27626256
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27626564 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 27626465  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27626464 gtcgttatggtcatggggctcttcttcatggtgcatgtgggcaccttcttcttcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 27626365  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27626364 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataatagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 27626265  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  27626264 tcttaatga 27626256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 24170304 - 24170002
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||    
T  24170304 ggacatcgtttcttagcccggatagttcgacaccttgcctttgttgctcagtgctaatcctttgtacctcagtttgcatccatgaccatcttccattgtt 24170205  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
     | || |||||      || |||| |||| ||||| || ||||||||| || |||||||||||||||||||||||||||||| | |||||||||||||||    
T  24170204 ttggtcatggt------gcgcctcctcattgtgcaagtttgcaccttcctcctcaccttgattatgctcttcatgtacctgtgaaccatcaccaacatac 24170111  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    || |||||| | |||||||||| |||||||||||||||||||||||||||||| |||| ||||| |  ||||||||||||||||||||||||||| ||||    
T  24170110 aaaaaatttgcttccacctcggtgttagtccgagatgggttaggaagtagaaacaaaataggtacgttaagttgaagtgcataagtcatgggtggatgaa 24170011  T
Q  316 tcttaatga 324  Q
      |||||||    
T  24170010 gtttaatga 24170002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 25368865 - 25368961
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||||||| ||||| ||| ||||||| | |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  25368865 ggacatcatttctttgcccgaatatttcaacatcttgcctttgttgctcggtgcttatcctctgaacctcagtttgcatccatgcccatctttcatt 25368961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 25372337 - 25372477
Alignment:
Q  133 gctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccac 232  Q
    ||||||| |||||||||| |||||||||||| || || ||   ||| |||||||||||||||||| | || ||||||||||| | ||||||||| |||||    
T  25372337 gctcctcatcatggtgcaagtgtgcaccttcctcttctccaacattgtgctcttcatgtacctgtgaaccttcaccaacatatatcaaattttcttccac 25372436  T
Q  233 ctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||||| |||||||||||||||||||||||||| || |||||    
T  25372437 ctcggtgttagtccgagatgggttaggaagtataattaaaa 25372477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 264
Target Start/End: Original strand, 17867294 - 17867551
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcat---- 111  Q
    |||||||||| ||||| || ||||||||||||||  ||||| |||||||||||||||||||||  ||||| ||| ||||||||| |||||||||||        
T  17867294 ggacatcattccttagtcccgataattcaacacctagccttagttgctcggtgcttatcctttcaacctcggttcgcatccatgtccatctttcattatc 17867393  T
Q  112 -tgttgtc-----gtt--atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | || ||     |||  |||||||| | | |||||||| ||||||| |||||||||||| || |||     | | |||||||||||||| ||  | | |    
T  17867394 attttttcctccagtttcatggtcatggtgatcctcttcttggtgcaagtgtgcaccttcctcttca---ataatgtgctcttcatgtacttgcgaacta 17867490  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  17867491 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 17867551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 25146054 - 25146208
Alignment:
Q  35 ggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgttgtcgttatggtcatagggc 134  Q
    ||||||||| ||| | ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||  | |||||    | ||    
T  25146054 ggataattcgacaacttgcctctgttgctcggtgctaatcctttgtacctcattttgcatccatgcccatctttcattgtggttttcatggt----gtgc 25146149  T
Q  135 tcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacct 195  Q
    |  || |||| ||||| |||||||||| || | |||||||||| ||||||||| |||||||    
T  25146150 t--tcctcattgtgcaagtgtgcacctcctgcttcaccttgataatgctcttcctgtacct 25146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 26192866 - 26192962
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||||||||  |||||  ||||||||||||| |||||||||| |||||||||||||||||  ||||| ||||||||||||| ||||||||||||    
T  26192866 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatt 26192962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 135 - 264
Target Start/End: Original strand, 24821486 - 24821615
Alignment:
Q  135 tcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacct 234  Q
    |||||||| ||||||| |||||||||||| ||| |  | | ||  || ||||||||||||| |    ||||| ||||||||||||||||||| |||||||    
T  24821486 tcctcttcttggtgcaagtgtgcaccttcctcgccttcatcatcgtgttcttcatgtacctatggatcatcaacaacatacaacaaattttcttccacct 24821585  T
Q  235 cggggttagtccgagatgggttaggaagta 264  Q
    ||| ||||||||||||||||||||||||||    
T  24821586 cggtgttagtccgagatgggttaggaagta 24821615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 25369016 - 25369084
Alignment:
Q  203 atcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataa 271  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||| | ||||||    
T  25369016 atcaccaacatacaacaaattgtcttccacctcggtgttagtccgagatgggttaggaagcataaataa 25369084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 116475 - 116384
Alignment:
Q  15 tggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatct 106  Q
    ||||||||||| ||||| ||   |||||||||||| ||||||||||||||| |||||||||| |  ||||| || |||||||||||||||||    
T  116475 tggacatcattccttagtcccattaattcaacaccttgcctttgttgctcgatgcttatcctctcgacctcggtatgcatccatgcccatct 116384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 23160851 - 23160901
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  23160851 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 23160901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 23572108 - 23572158
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  23572108 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 23572158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 27630245 - 27630195
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  27630245 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 27630195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 24821347 - 24821407
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcct 76  Q
    |||||||||| ||||| || |||||||||||||| |||||||| |||||||||||||||||    
T  24821347 ggacatcattccttagtcccgataattcaacaccttgcctttgatgctcggtgcttatcct 24821407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 25372229 - 25372281
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtg 68  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  25372229 ggacatcatttcgtagcccggataattcaataccttgcctttgttgctcggtg 25372281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 116270 - 116220
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  116270 aacatacaacaaattttcttccacctcggtgttagtccgagatgagttagg 116220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 16774402 - 16774345
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  16774402 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 16774345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 24796764 - 24796821
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  24796764 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 24796821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 27770067 - 27770107
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatccttt 78  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  27770067 taattcaacaccttgcctttgttgctcggtgcttatccttt 27770107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 27630452 - 27630381
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||||| ||   |||||||||||||||| ||||    
T  27630452 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatcttgcatt 27630381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 16774602 - 16774536
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||||| ||   ||||||||||||||||    
T  16774602 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatctt 16774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 23160644 - 23160715
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||||| ||||||||||||||||| ||||| ||||  ||||| ||   |||||||||||||||| ||||    
T  23160644 ttcaacaccttgcctttgttgctcggtacttattctttcgacctcggtagtcatccatgcccatcttgcatt 23160715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 23571901 - 23571972
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||||| ||||||||||||||||| ||||| ||||  ||||| ||   |||||||||||||||| ||||    
T  23571901 ttcaacaccttgcctttgttgctcggtacttattctttcgacctcggtagtcatccatgcccatcttgcatt 23571972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 24501296 - 24501210
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| |||||||||||||  | ||||||||| || ||||||| |||||||| ||| ||||| || || | |||||||||||||||    
T  24501296 ggacatcgtttcttagcccggccatttcaacaccttgtctttgtttctcggtgcatattctttgaacttc-gattgcatccatgccca 24501210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 24796564 - 24796630
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| |||||||||||||||||| |||| ||||  ||||| ||   ||||||||||||||||    
T  24796564 ttcaacaccttgcctttgttgctcggtgtttattctttcgacctcggtagtcatccatgcccatctt 24796630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 8716834 - 8716526
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8716834 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 8716735  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8716734 gtcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 8716635  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8716634 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 8716535  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  8716534 tcttaatga 8716526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 18286595 - 18286287
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18286595 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 18286496  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18286495 gtcgttatggtcatggggctcctcttcatggtgcatgtgggcaccttcttcgtcaccttgataatgctcttcatgtacctgtaatccatcaccaacatac 18286396  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18286395 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagggcataagtcatgggtgggtgaa 18286296  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  18286295 tcttaatga 18286287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 14550066 - 14549758
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14550066 ggacattatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 14549967  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14549966 gtcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtaccagtaatccatcaccaacatac 14549867  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||    
T  14549866 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagtggtatgcgaagttgaagtgcataagtcatgggtgactgaa 14549767  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  14549766 tcttaatga 14549758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 16466859 - 16467167
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||     
T  16466859 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctctgtacctcggtttgcatccatgcccatctttcattgtc 16466958  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
     ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16466959 atcgttatggtcatggggttcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 16467058  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16467059 aacaaattttcctccacctcggggttagtccgagatgggttacgaagtagaaacaaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 16467158  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  16467159 tcttaatga 16467167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 13656903 - 13656595
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13656903 ggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 13656804  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | | |||||||||| ||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13656803 ggcattatggtcatggggctcctcttcatggtgcatatttgcaccgtcttcttcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 13656704  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13656703 aacaaattcgcctccacctcggtgttagtccgagatgggttaggaagcagaaacaaaagaggtatacgaagttgaagtgcataagtcatgggtggatgaa 13656604  T
Q  316 tcttaatga 324  Q
     ||||||||    
T  13656603 gcttaatga 13656595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 310
Target Start/End: Original strand, 48803105 - 48803397
Alignment:
Q  18 acatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgttgt 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |     
T  48803105 acatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatcttccattttcgg 48803204  T
Q  118 cgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaa 217  Q
    | | |||||||| | ||| |||||||||||||| || ||||||||| || |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  48803205 catcatggtcatggtgcttctcttcatggtgcaagtttgcaccttcgtcctcaccttgattatgctcttcatgtacctgtgaaccatcaccaacatacaa 48803304  T
Q  218 caaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgg 310  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||||||| |||||||| |     |||| |||||||||||||||||||||    
T  48803305 caaatttgcttccacctcggtgttagtccgagatgggttaggaagtagaaacaaaagaggcacattgagtttaagtgcataagtcatgggtgg 48803397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 824597 - 824331
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatcttt------c 109  Q
    |||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||||      |    
T  824597 ggacatcattccttagtcccgataattcaacaccttgccttagttgctcggtgcttatcctttcaacctcagtttgcatccatgtccatctttcattatc 824498  T
Q  110 attgtt--gtc--gtt--atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
    ||||||  |||  |||  |||||||| | | |||||||| ||||||| |||||||||||| || |||     | | |||||||||||||||||  | | |    
T  824497 attgtttcgtccggtttcatggtcatggtgatcctcttcttggtgcaggtgtgcaccttcctcttca---ataatgtgctcttcatgtacctgcgaacta 824401  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||||| || |||||    
T  824400 tcaccaatataaaacaaattttcttccacctcggtgttagtccgagatgggttaggaagtataattaaaa 824331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 20107246 - 20106977
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||| ||||||||||||| |  |||||  | ||||||||||||||||||||||| |     
T  20107246 ggacatcatttcgtagtccggataactcaacaccttgcctttgttgcacggtgcttatcctctcaacctctatgtgcatccatgcccatctttcattatc 20107147  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||            |||||||| | |||||||  ||||||||| |||| ||||||| || || ||   | | ||||||||||| |||||  |  ||    
T  20107146 attgtttcctccggtatcatggtcatggtgctcctcagcatggtgcaagtgtacaccttcctcttctccagcaatgtgctcttcatgcacctgcgaaaca 20107047  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| || |||||    
T  20107046 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagtataattaaaa 20106977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 15064731 - 15064474
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatcttt------c 109  Q
    |||||||||| ||||| || |||||||||||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||| ||||||||      |    
T  15064731 ggacatcattccttagtcccgataattcaacaccttgccgtagttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatcttttattatc 15064632  T
Q  110 attgttgtc----gtt--atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
    ||||||  |    |||  |||||||| | | |||||||| ||||||| |||||||||||| || |||     | | |||||||||||||||||  | | |    
T  15064631 attgtttcctccggtttcatggtcatggtgatcctcttcttggtgcaagtgtgcaccttcctcttcaat---aatgtgctcttcatgtacctgcgaacta 15064535  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  15064534 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 15064474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 15921409 - 15921502
Alignment:
Q  180 tgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||||||||||||||  | | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| || |||||    
T  15921409 tgctcttcatgtacctgcgaactatcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagtataattaaaa 15921502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 15918013 - 15918107
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttca 110  Q
    |||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||| ||| ||||||||||    
T  15918013 ggacatcattccttagtcccgataattcaacaccttgccttagttgctcggtgcttatcctttcaacctcagtttgcatcgatgtccatctttca 15918107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 13672827 - 13672736
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||  ||||| ||   ||||||||||||||||    
T  13672827 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatctt 13672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 16150972 - 16151034
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  16150972 catcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 16151034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 16761252 - 16761307
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  16761252 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggcagta 16761307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 16530783 - 16530728
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||||    
T  16530783 aacatacaacaaattttcttccacctcggtgttagtctgagatgggttaggcagta 16530728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 16634879 - 16634934
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||||    
T  16634879 aacatacaacaaattttcttccacctcggtgttagtctgagatgggttaggcagta 16634934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 13672602 - 13672545
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  13672602 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 13672545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 16530991 - 16530918
Alignment:
Q  39 aattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||| ||| ||||||| |||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  16530991 aattcaataccttgcctttcttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 16530918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 16634671 - 16634744
Alignment:
Q  39 aattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||| ||| ||||||| |||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  16634671 aattcaataccttgcctttcttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 16634744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 16761058 - 16761131
Alignment:
Q  39 aattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||||||| |||||| |||||| |||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  16761058 aattcaacaccttgccttagttgctaggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 16761131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 18594738 - 18594795
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  18594738 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 18594795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 18616946 - 18616889
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  18616946 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 18616889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 16150747 - 16150843
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||| ||| ||||| || || ||||||||||| |||||| |||||| |||||||||||| |   |||| || |||||||||||||||||| ||||    
T  16150747 ggacataattccttagtcccgacaattcaacaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcatt 16150843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 5396111 - 5396024
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || |||||||||||||||||    
T  5396111 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgccca 5396024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 8783332 - 8783419
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||  || |||||||||||||||| ||| ||||| || || ||||||||||| |||||    
T  8783332 ggacatcgtttcttagcccgaccatttcaacactttgtctttgttgctcggtgcatattctttgaacttcggtttgcatccacgccca 8783419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 16327010 - 16327097
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || |  |||||||||||||||||    
T  16327010 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaactttggtttgcatccatgccca 16327097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 23514051 - 23513964
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||||||||||||||||   | ||||||||| || | |||||||||||||  ||| ||||| || |  |||||||||||||||||    
T  23514051 ggacatcatttcttagcccgatcatttcaacaccttgtcattgttgctcggtgaatattctttgaactttggtttgcatccatgccca 23513964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 13741379 - 13741317
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||||| || ||| |||||||||||| ||| ||||| || || |||||||||||||||||    
T  13741379 ttcaacaccttgtcttcgttgctcggtgcatattctttgaacttcggtttgcatccatgccca 13741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 18594538 - 18594604
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| |||||||||||||| |||||||| ||||  ||||| ||   ||||||||||||||||    
T  18594538 ttcaacaccttgcctttgttgctcagtgcttattctttcgacctcggtagtcatccatgcccatctt 18594604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 18617146 - 18617080
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| |||||||||||||| |||||||| ||||  ||||| ||   ||||||||||||||||    
T  18617146 ttcaacaccttgcctttgttgctcagtgcttattctttcgacctcggtagtcatccatgcccatctt 18617080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 15734504 - 15734196
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15734504 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 15734405  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15734404 gtcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 15734305  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15734304 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 15734205  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  15734204 tcttaatga 15734196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 25008027 - 25008335
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  25008027 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgtccatctttcattgtt 25008126  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25008127 gtcgttatggtcatggggctcctcttcatggtgcatgtgggcaccttctttgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 25008226  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25008227 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 25008326  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  25008327 tcttaatga 25008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 23747021 - 23746713
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23747021 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 23746922  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23746921 gtcgttatggtcatgggtctcctcttcatggtgcaagtgtgcaccttcgtcgtcaccttgattatgctcttcatgtacctgtaatctatcaccaacatac 23746822  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23746821 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 23746722  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  23746721 tcttaatga 23746713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 20621133 - 20620825
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20621133 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 20621034  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20621033 gtcgttatggtcatggcgctcttcttcatggtgcatgtgggcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 20620934  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20620933 aacaaattttcctccaccttggggttagtccgagatgggttaggaagtagaaataaaagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 20620834  T
Q  316 tcttaatga 324  Q
     ||||||||    
T  20620833 ccttaatga 20620825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 22318728 - 22319035
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22318728 ggacgtcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtc 22318827  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | | |||||||||| ||| |||||||||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22318828 ggcattatggtcatggggttcctcttcatggtgcacgtttgcaccttcctcttcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 22318927  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  22318928 aacaaatttgcctccacctcggtgttagtccgagatgggttaggaaatagaaacaaaagaggtatacgaagttgaagtgcataggtcat-ggtgggtgaa 22319026  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  22319027 tcttaatga 22319035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 277
Target Start/End: Complemental strand, 22947401 - 22947128
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgt- 114  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||| |  ||||| ||||||||||||| |||||||||||| |     
T  22947401 ggacatcatttcttaccccggatatttcaacaccttgcctttgttgcttggtgcttatcctctaaacctccgtttgcatccatggccatctttcattttc 22947302  T
Q  115 ----tgtc-------gttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
        | ||       || |||||||| | |||||||  ||||||||| || ||||||||| ||  ||||| |||| ||||||||||||||||||   |||    
T  22947301 aaattttcctccggtgtcatggtcatggtgctcctcaacatggtgcaagtttgcaccttcctccacacctagattgtgctcttcatgtacctgtggacca 22947202  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagagg 277  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  22947201 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagtataaataaaagagg 22947128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 35 - 273
Target Start/End: Complemental strand, 21387258 - 21387011
Alignment:
Q  35 ggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt------gttgtc------gtta 122  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||      ||| ||      || |    
T  21387258 ggataattcaataccttgcctttgttgctcggtgcttatcctttcaacctcagtttgcatccatgcccacctttcattttcaaagttttctcaagtgtca 21387159  T
Q  123 tggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaat 222  Q
    ||||||| | ||||||| |||||||||| || ||||||||| || |||||   ||| ||| || ||||||||||     |||||||||||||||| ||||    
T  21387158 tggtcatggtgctcctcatcatggtgcaagtttgcaccttcctcctcaccaacattgtgcactccatgtacctgaggatcatcaccaacatacaaaaaat 21387059  T
Q  223 tttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    || | |||||||||| ||||||||   | ||||||||||||||||||||||    
T  21387058 ttgcttccacctcggtgttagtcc---aagggttaggaagtagaaataaaa 21387011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 30760886 - 30760982
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||||||||| ||   |||||||||||| |||||||||||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  30760886 ggacatcatttcttagtcccattaattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 30760982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 18071675 - 18071594
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  18071675 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 18071594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 20597290 - 20597371
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  20597290 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 20597371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 20603587 - 20603668
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  20603587 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 20603668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 20609906 - 20609987
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  20609906 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 20609987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 26846637 - 26846541
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||| | || || ||||||||||| |||||||||||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  26846637 ggacatcattccttggtcccgacaattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtgtgcatccatgcccatcttgcatt 26846541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 23520623 - 23520678
Alignment:
Q  208 caacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagt 263  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  23520623 caacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagt 23520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 20439430 - 20439504
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||||| |||||||||||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  20439430 taattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 20439504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 20792252 - 20792314
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  20792252 catcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 20792314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 20439633 - 20439690
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20439633 catcatcaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 20439690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 25117622 - 25117677
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  25117622 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggcagta 25117677  T

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Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 25176713 - 25176768
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  25176713 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggcagta 25176768  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 25117389 - 25117486
Alignment:
Q  15 tggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||||||| ||||| ||   |||||||||||| |||||||||| |||||||||||||||    |||||| | |||||||||||||||||| ||||    
T  25117389 tggacatcattccttagtcccattaattcaacaccttgcctttgttactcggtgcttatcctcccgacctcaatatgcatccatgcccatcttgcatt 25117486  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 25176480 - 25176577
Alignment:
Q  15 tggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    ||||||||||| ||||| ||   |||||||||||| |||||||||| |||||||||||||||    |||||| | |||||||||||||||||| ||||    
T  25176480 tggacatcattccttagtcccattaattcaacaccttgcctttgttactcggtgcttatcctcccgacctcaatatgcatccatgcccatcttgcatt 25176577  T

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Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 24954646 - 24954703
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  24954646 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 24954703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 26846411 - 26846350
Alignment:
Q  203 atcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||| ||||||||||||||||||| |||||||||| |||| ||| ||||||||||| |||||    
T  26846411 atcaacaacatacaacaaattttcttccacctcggtgttattccaagatgggttagaaagta 26846350  T

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Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 18071881 - 18071785
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||| ||| ||||| || || ||||||||||| |||||| |||||| |||||||||||| |   |||| || |||||||||||||||||| ||||    
T  18071881 ggacataattccttagtcccgacaattcaacaccttgccttagttgcttggtgcttatcctctagtcctcggtatgcatccatgcccatcttgcatt 18071785  T

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Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 18487294 - 18487381
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || |||||||||||||||||    
T  18487294 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgccca 18487381  T

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Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 22827990 - 22828077
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || |||||||||||||||||    
T  22827990 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgccca 22828077  T

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Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 24954446 - 24954512
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||||| ||   ||||||||||||||||    
T  24954446 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatctt 24954512  T

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Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 20792027 - 20792123
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||| ||| ||||| || || ||||||||||| |||||| ||| || |||||||||||| |   |||| || |||||||||||||||||| ||||    
T  20792027 ggacataattccttagtcccgacaattcaacaccttgccttagtttcttggtgcttatcctctcggcctctgtatgcatccatgcccatcttgcatt 20792123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 21282141 - 21282225
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgc 100  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || ||||||||||||||    
T  21282141 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgc 21282225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 23601871 - 23601958
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || ||||||||| |||||||    
T  23601871 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 23601958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 24939513 - 24939426
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || ||||||| |||||||| | | ||||| || || |||||||||||||||||    
T  24939513 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgtttctcggtgcatgttctttgaacttcggtttgcatccatgccca 24939426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 20597084 - 20597144
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcct 76  Q
    |||||| ||| ||||| || || ||||||||||| |||||| |||||| ||||||||||||    
T  20597084 ggacataattccttagtcccgacaattcaacaccttgccttagttgcttggtgcttatcct 20597144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 20603381 - 20603441
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcct 76  Q
    |||||| ||| ||||| || || ||||||||||| |||||| |||||| ||||||||||||    
T  20603381 ggacataattccttagtcccgacaattcaacaccttgccttagttgcttggtgcttatcct 20603441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 30764587 - 30764631
Alignment:
Q  214 acaacaaattttcctccacctcggggttagtccgagatgggttag 258  Q
    ||||||||||  | |||||||||| ||||||||||||||||||||    
T  30764587 acaacaaattcgcttccacctcggtgttagtccgagatgggttag 30764631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 285; Significance: 1e-160; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 7599326 - 7599018
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7599326 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 7599227  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7599226 gtcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 7599127  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  7599126 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtaaaaacaaaagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 7599027  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  7599026 tcttaatga 7599018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 15630200 - 15630508
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15630200 ggacatcatttctttgcctggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 15630299  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15630300 gtcgttatggtcatggggctcctcttcatggtgcatgtgggcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 15630399  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15630400 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 15630499  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  15630500 tcttaatga 15630508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 13137413 - 13137721
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  13137413 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcgttcattgtt 13137512  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13137513 gtcgttatggtcatggggctcctcctcatggtgcatgtgggcaccttcttcgtcaccttgatgatgctcttcatgtacctgtaatccatcaccaacatac 13137612  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13137613 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 13137712  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  13137713 tcttaatga 13137721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 13188661 - 13188969
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  13188661 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcctatcctttgtacctcggtttgcatccatgcccatctttcattgtt 13188760  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13188761 gtcgttatggtcatggggctcttcttcatggtgcatgtgagcaccctcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 13188860  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  13188861 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtaaaaacaaaagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 13188960  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  13188961 tcttaatga 13188969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 16 - 322
Target Start/End: Original strand, 16374723 - 16375029
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16374723 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 16374822  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16374823 gtcgttatggtcatggggctcttcttcatggtgcatgtgggcaccctcttcgtcaccttgattatgttcttcatgtacctgtaatccatcaccaacatac 16374922  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16374923 aagaaattttcctccacctcggggttagtccgagatgggttaggaagtaaaaataaaagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 16375022  T
Q  316 tcttaat 322  Q
    |||||||    
T  16375023 tcttaat 16375029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 12188319 - 12188627
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  12188319 ggacatcatttcttagcccagataagtcaacaccttgcctttgttgctcggttcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 12188418  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12188419 gtcgttatggtcatggggctcttcttcatggtgcatgtgggcaccctcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 12188518  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  12188519 tacaaattttcctccacctcggggttagtccgagatgggttaggaagtaaaaacaaaagtggtatacgaagttgaagtgcataagtcatgggtgggtgaa 12188618  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  12188619 tcttaatga 12188627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 12194733 - 12195041
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  12194733 ggacatcatttcttagcccagataagtcaacaccttgcctttgttgctcggttcttatcctttgtacctcggtttgcatccatgcccacctttcattgtt 12194832  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12194833 gtcgttatggtcatggggctcttcttcatggtgcatgtgggcaccctcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 12194932  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  12194933 tacaaattttcctccacctcggggttagtccgagatgggttaggaagtaaaaacaaaagtggtatacgaagttgaagtgcataagtcatgggtgggtgaa 12195032  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  12195033 tcttaatga 12195041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 10145981 - 10145673
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||     
T  10145981 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcgttcattgtc 10145882  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  10145881 gtcgttatggtcatggggctcttcttcatggtgcatgtgagcaccctcttcgtcaccttgattatgctcctcgtgtacctgtaatccatcaccaacatac 10145782  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  10145781 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtaaaaacaaaagtggtatgcgaagttgaagtgcataagtcatgggtggatgaa 10145682  T
Q  316 tcttaatga 324  Q
    | |||||||    
T  10145681 ttttaatga 10145673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 13196673 - 13196981
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13196673 ggacatcattccttagcctggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 13196772  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | | |||||||||| |||||||||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13196773 ggcattatggtcatggggctcctcttcatagtgcatgtttgcaccgtcttcttcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 13196872  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13196873 aacaaatttgcctccacctcggtgttagtccgagatgggttaggaagcagaaacaaaagaggtatacgaagttgaagtgcataagtcatgggtggatgaa 13196972  T
Q  316 tcttaatga 324  Q
     ||||||||    
T  13196973 gcttaatga 13196981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 277
Target Start/End: Complemental strand, 3278439 - 3278167
Alignment:
Q  17 gacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgttg 116  Q
    |||||||||||||| |||||||||||||||||| || |||||||||| |||| ||||||| |  |||||||||||||||||||||||||||||||| |      
T  3278439 gacatcatttcttatcccggataattcaacaccttgtctttgttgcttggtgtttatcctctcaacctcagtttgcatccatgcccatctttcattttca 3278340  T
Q  117 tcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccat 204  Q
    | |||            |||||||| | | ||||| |||||||||| |||||||||||| || || ||   ||| |||||||||||||||||| | ||||    
T  3278339 ttgttttctccgacatcatggtcatggtgttcctcatcatggtgcaagtgtgcaccttcctcttctccaacattgtgctcttcatgtacctgtgaaccat 3278240  T
Q  205 caccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagagg 277  Q
    |||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  3278239 caccaacatacatcaaattttcttccacctcggtgttagtccgagatgggttaggaagtataaataaaagagg 3278167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 13689637 - 13689502
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13689637 ggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 13689538  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcat 151  Q
    | | |||||||||| |||||||||||||||||||||    
T  13689537 ggcattatggtcatggggctcctcttcatggtgcat 13689502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 17386726 - 17386458
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt--g 113  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |  ||||  || || ||||||||||||||||||||       
T  17386726 ggacatcatttcgtagcccggataattcaacaccttgcctttgttgctcgttgcttatcctctcaacctaggtgtgtatccatgcccatctttcatttca 17386627  T
Q  114 tt---------gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccat 204  Q
    ||         | | | |||||||| | ||||||| |||||||||| |||||||||||| || || |    ||| | |||||||||||||||| | || |    
T  17386626 ttatttcttccggcatcatggtcatggtgctcctcatcatggtgcaagtgtgcaccttcctcttctctagcattgttctcttcatgtacctgtgaacctt 17386527  T
Q  205 caccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||||||| |  || ||||| |||||||||| |||||||||||||||||||||||||| || |||||    
T  17386526 caccaacatatattaatttttcttccacctcggtgttagtccgagatgggttaggaagtataattaaaa 17386458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 13693849 - 13693589
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||  || ||||||| ||||||||| ||||||||||||||||||||||||||||  ||||| |||| |||||||| |||||||||||  |     
T  13693849 ggacatcatttcggagtccggatagttcaacaccttgcctttgttgctcggtgcttatcctttcaacctcggtttacatccatgtccatctttcatgatc 13693750  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
    || |||            |||| ||| | ||||||| |||||||||| ||||||||||||  | ||  |   | | |||||||||||||||||  |  |     
T  13693749 gttgtttcctccgatatcatggccatggtgctcctcatcatggtgcaagtgtgcaccttccgcttcttccgcaatgtgctcttcatgtacctgcgagtcg 13693650  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  13693649 tcaccaacatacaacaaattttcatccacctcggtgttagtctgagatgggttaggaagta 13693589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 20157697 - 20157966
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||  || || |||||||||||||||||||||| ||||||||||||||| |  ||||| || || |||||||| ||||||||||| |     
T  20157697 ggacatcatttcttaatcctgaaaattcaacaccctgcctttgtttctcggtgcttatcctctccacctcggtatgtatccatgctcatctttcattttc 20157796  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||            |||||||| | ||||||| |||||||||| |||||||||||| || ||  ||  ||  ||| |||||||||| |||    ||    
T  20157797 attgttttctccggcatcatggtcatggtgctcctcatcatggtgcaagtgtgcaccttcctcttcttctgcatcgtgcgcttcatgtacatgtggatca 20157896  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||| ||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||||||    
T  20157897 tcaacaacatacaacaaattttctttcacctcggtgttagtccaagatgggttaggaagtacaaataaaa 20157966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 273
Target Start/End: Original strand, 14446817 - 14447075
Alignment:
Q  24 tttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgt---tgt--- 117  Q
    |||| ||| ||||||||||||||||| | ||||| |||||||||||||||||| |  |||||| | || ||||||| ||||||||||||||   |||       
T  14446817 tttcgtagtccggataattcaacaccttcccttttttgctcggtgcttatcctctcaacctcattgtgtatccatgtccatctttcattgtcattgttgc 14446916  T
Q  118 ------cgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaac 211  Q
          ||| |||||||| | |||| ||   ||||||||  ||||||||||| || || ||   |||  |||||||||||||||||    ||||| ||||    
T  14446917 cttcggcgtcatggtcatggtgctcatc---atggtgcaaatgtgcaccttcctcttctcccatattgggctcttcatgtacctgtggatcatcaacaac 14447013  T
Q  212 atacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| || |||||    
T  14447014 atacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagtataattaaaa 14447075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 4369644 - 4369375
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgt- 114  Q
    |||||||||| ||||| || || ||||||||||| |||||| |||||| |||||||||||| |   |||| || |||||||||||||||||| |||| |     
T  4369644 ggacatcattccttagtcccgaaaattcaacaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcattttc 4369545  T
Q  115 ---tgt--------cgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
       |||        | | |||||||| | ||||||| ||||||||||  || |||||||| ||| |  | | ||  || |||||||||||||||    ||    
T  4369544 atttgtttatccggcatcatggtcatggtgctcctcatcatggtgcaattgcgcaccttcctcgccttcattatcgtgttcttcatgtacctgtggatca 4369445  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| || |||||    
T  4369444 tcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagtataattaaaa 4369375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 259
Target Start/End: Original strand, 3340485 - 3340718
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttca-------ttgtt-----gtcgttatgg 125  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||| || | |||||||||||||||| ||       |||||      || | ||||    
T  3340485 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcggtattcatccatgcccatcttgcattttcatttgtttcaccttcatcatgg 3340584  T
Q  126 tcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttc-atgt--acctgtaatccatcaccaacatacaacaaat 222  Q
    |||| | ||||||| ||||||||||| |||||||||||  | |   ||| |||||||| ||| ||||  ||||||    |||||  ||||||||||||||    
T  3340585 tcatggtgctcctcatcatggtgcatttgtgcaccttccgctt---cttcattatgctgttctatgtgcacctgtgggtcatcattaacatacaacaaat 3340681  T
Q  223 tttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||| |||||||||| |||||||||||||||||||||    
T  3340682 tttcttccacctcggtgttagtccgagatgggttagg 3340718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 13505781 - 13505850
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||| |||| ||||||||||||||||    
T  13505781 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcggttttcatccatgcccatctt 13505850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 22165754 - 22165829
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttag 258  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22165754 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttag 22165829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 15945563 - 15945489
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||||| |||||||||||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  15945563 taattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 15945489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 10603983 - 10604064
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  10603983 tcttcatgtacctgtggatcatcaacaatatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 10604064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 264
Target Start/End: Original strand, 12161466 - 12161595
Alignment:
Q  135 tcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacct 234  Q
    |||||||| ||||||| |||||||||||| |||||  | | |||||| ||| |||| | ||||    |||||  |||||||||||||||||| |||||||    
T  12161466 tcctcttcttggtgcaagtgtgcaccttcctcgtcttcattattatgttctacatgcatctgtgggtcatcattaacatacaacaaattttcttccacct 12161565  T
Q  235 cggggttagtccgagatgggttaggaagta 264  Q
    ||| ||||||||||||||||| ||| ||||    
T  12161566 cggtgttagtccgagatgggtaaggcagta 12161595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 16654481 - 16654400
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||| |||||    
T  16654481 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttacacctcggtgttagtccgagatgggttagaaagta 16654400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 12161308 - 12161404
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || |  ||||||||||| |||||||||||||||||| ||||||| |  ||||| || |||||||||||||||||| ||||    
T  12161308 ggacatcattccttagtcccgtcaattcaacaccttgcctttgttgctcggtgtttatcctctcgacctcggtatgcatccatgcccatcttgcatt 12161404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 13505991 - 13506041
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  13505991 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 13506041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 15945326 - 15945276
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  15945326 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 15945276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 10161657 - 10161714
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  10161657 catcagcaacatacaacaaatttgcttccacctcggtgttagtgcgagatgggttagg 10161714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 15643824 - 15643767
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  15643824 catcagcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 15643767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 3246747 - 3246834
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||  || ||||||||| || |||||||||||||||| ||| | ||| || || |||||||| ||||||||    
T  3246747 ggacatcgtttcttagcccgattatttcaacaccttgtctttgttgctcggtgcatattcgttgaacttcggtttgcatgcatgccca 3246834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 12423817 - 12423879
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||| ||||||| || |||||||| |||||||||| |||||||||||||| ||||| |||||    
T  12423817 catcaacaacataaaagaaattttcttccacctcggtgttagtccgagatgtgttagaaagta 12423879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 22165548 - 22165644
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||| ||| ||||| || || ||||||||||| |||||| |||||| |||||||||||| |   |||| || ||||||||||| |||||| ||||    
T  22165548 ggacataattccttagtcccgacaattcaacaccttgccttagttgcttggtgcttatcctctagtcctcggtatgcatccatgctcatcttgcatt 22165644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 10161457 - 10161523
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| |||||||||||||||||| |||| ||||  ||||| ||   ||||||||||||||||    
T  10161457 ttcaacaccttgcctttgttgctcggtgtttattctttcaacctcggtagtcatccatgcccatctt 10161523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 16654664 - 16654591
Alignment:
Q  39 aattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||| |||| |||||| |||||| |||||||||||| |   |||| || |||||||||||||||||| ||||    
T  16654664 aattcatcaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcatt 16654591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 10603777 - 10603873
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||| ||| ||||| || || ||||| ||||| | |||| |||||| |||| ||||||| |   ||||||| |||||||||||||||||| ||||    
T  10603777 ggacataattccttagtcccgacaattccacaccttcccttagttgcttggtgtttatcctctcagcctcagtatgcatccatgcccatcttgcatt 10603873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 21381063 - 21380755
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21381063 ggacatcatttcttagcccagataattcgacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 21380964  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21380963 gtcgttatggttatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 21380864  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21380863 aacaaattttcctccacctcggggttagtccgagaagggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 21380764  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  21380763 tcttaatga 21380755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 22100869 - 22101177
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  22100869 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtc 22100968  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22100969 ggcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 22101068  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22101069 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtataaacaaaagaggtatacgaagttgaagtgcataagtcatgggtgggtgaa 22101168  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  22101169 tcttaatga 22101177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 8324095 - 8324403
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8324095 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 8324194  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8324195 gtcgttatggtcatggggctcttcctcatggtgcatctgggcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 8324294  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8324295 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 8324394  T
Q  316 tcttaatga 324  Q
    | |||||||    
T  8324395 ttttaatga 8324403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 8313438 - 8313130
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  8313438 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgta 8313339  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8313338 gtcgttatggtcatggggctcttcttcatggtgcatgtgggcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 8313239  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| ||||||||||||||||||    
T  8313238 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataatagtggtattcgaagttgaagtgcaaaagtcatgggtgggtgaa 8313139  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  8313138 tcttaatga 8313130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 22034774 - 22035082
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||     
T  22034774 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttattctttgtacctcggtttgcatccatgccaatctttcattgtc 22034873  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22034874 ggtgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 22034973  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  22034974 aacaaattttcctccacctcggggttagtacgagatgggttaggaagtagaaacaaaagaggtatgcaaagctgaagtgcataagtcatgggtgggtgaa 22035073  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  22035074 tcttaatga 22035082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 21955049 - 21954741
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||      
T  21955049 ggacatcatttcttagcccggataattcaacaccttgtctttgttgctcggtgcttatcctttgtacctcggtttggatccatgcccatctttcattgac 21954950  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    ||||||| |||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21954949 gtcgttagggtcatggggttcctcttcgtggtgtatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 21954850  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  21954849 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaacaaaagaggtatgcgaagttgaagtgcataagtaatgggtgggtgaa 21954750  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  21954749 tcttaatga 21954741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 22098193 - 22097885
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||     
T  22098193 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcagtgcttatcctttgtacctcgatttgcatccatgcccatctttcattgtc 22098094  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22098093 gtcgttatggtcatggggttcctcttcatggtgcatgtgtgcaccgtcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 22097994  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  22097993 aacaaattctcctccacctcggggttagtccgagatgggttaggaaggagaaacaaaagaggtatgcgaagctgaagtgcataagttatgggtgggtgaa 22097894  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  22097893 tcttaatga 22097885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 16419844 - 16420152
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16419844 ggacatcattccttagcccggataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 16419943  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | | |||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  16419944 ggcattatggtcatggggctcctctttatggtgcatgtttgcaccgtcttcttcaccttgattatgctcttcatgtacgtgtaatccatcaccaacatac 16420043  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  16420044 aacaaattcgcctccacctcggtgttagtccaagatgggttaggaagcagaaataaaagaggtatacgaagttgaagtgcataagtcatggatggatgaa 16420143  T
Q  316 tcttaatga 324  Q
     ||||||||    
T  16420144 gcttaatga 16420152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 17132585 - 17132461
Alignment:
Q  200 tccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataa 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17132585 tccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataa 17132486  T
Q  300 gtcatgggtgggtgaatcttaatga 324  Q
    |||||||||||||||||||||||||    
T  17132485 gtcatgggtgggtgaatcttaatga 17132461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 22289995 - 22289741
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |  |||||||||||||| ||||||||||||||||| |     
T  22289995 ggacatcatttcttagcccggataattcaacatcttgcctttgttgctcggtgcttatcctctcaacctcagtttgcattcatgcccatctttcattttc 22289896  T
Q  116 gtcgttatggtcatagggc-tcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacata 214  Q
     | | |    || |  ||| || |  |||||||||| |||||||||||| || || ||   ||| |||||||||||||||||| | ||||||||||||||    
T  22289895 attgct----tcctccggcatcatggtcatggtgcaagtgtgcaccttcctcttctccagcattgtgctcttcatgtacctgtgaaccatcaccaacata 22289800  T
Q  215 caacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||||||||| |||||||||| |||||||||||||| | ||||||||| || |||||    
T  22289799 caacaaattttcttccacctcggtgttagtccgagatgagataggaagtataattaaaa 22289741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 264
Target Start/End: Original strand, 21942698 - 21942958
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||  |||||  ||||||||||||| |||||||||| |||||||||||||||||  ||||| ||||||||||||| |||||||||||| |     
T  21942698 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 21942797  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||            |||||||| | ||||||| || ||||||| |||||||||||| || || ||   | | |||||||||||||||||  | |||    
T  21942798 attgtttcctccggtttcatggtcatggtgctcctcctcttggtgcaagtgtgcaccttcctcttctccaataatgtgctcttcatgtacctgcgaacca 21942897  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21942898 tcaccaacatacaacaaattttcctccacctcggtgttagtccgagatgggttaggaagta 21942958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 11348192 - 11348458
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||| ||||| || |||||||  ||||| |||||| |||||||||||||||||||||  ||||| ||||||||||||| |||||||||||| |     
T  11348192 ggacatcattccttagtcccgataatttgacaccttgccttagttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 11348291  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||            |||||||| | | |||||||| ||||||| |||||||||||| || |||     | | |||||||||||||||||  | | |    
T  11348292 attgtttcctccggtttcatggtcatggtgatcctcttcttggtgcaagtgtgcaccttcctcttcaat---aatgtgctcttcatgtacctgcgaacta 11348388  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| || |||||    
T  11348389 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagtataattaaaa 11348458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 22368927 - 22368670
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||  |||||  ||||||||||||| |||||||||| |||||||| ||||||||  ||||| ||||||||||||| |||||||||||| |     
T  22368927 ggacatcatttcggagccctcataattcaacaccttgcctttgttactcggtgcatatcctttcaacctcggtttgcatccatgtccatctttcattatc 22368828  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||            |||||||| | | |||||||| ||||||| |||||||||||| || |||     | | |||||||||||||||||  | | |    
T  22368827 attgtttcctacggtttcatggtcatggtgatcctcttcttggtgcaagtgtgcaccttcctcttcaat---aatgtgctcttcatgtacctgcgaacta 22368731  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  22368730 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagta 22368670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 22830743 - 22830603
Alignment:
Q  133 gctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccac 232  Q
    ||||||| |||||||||| |||||||||||| || || ||   ||| |||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  22830743 gctcctcatcatggtgcaagtgtgcaccttcctcttctccagcattgtgctcttcatgtacctgtgaaccatcaccaacatacaacaaattttcttccac 22830644  T
Q  233 ctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||  ||||||||||||||||||||||||| || |||||    
T  22830643 ctcggtattagtccgagatgggttaggaagtataattaaaa 22830603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 263
Target Start/End: Original strand, 21100218 - 21100340
Alignment:
Q  141 tcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggt 240  Q
    |||||||||| ||||||| | ||  | ||||||||||||||||||||||||||||||    ||||| ||||||||||||||||||| |||||||||| ||    
T  21100218 tcatggtgcaagtgtgcatcatccgcttcaccttgattatgctcttcatgtacctgtgggtcatcatcaacatacaacaaattttcttccacctcggtgt 21100317  T
Q  241 tagtccgagatgggttaggaagt 263  Q
    |||||||||||||||||||||||    
T  21100318 tagtccgagatgggttaggaagt 21100340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 21100057 - 21100156
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||| ||||||||| | ||||| |||||||||||||||||| ||||||| | ||||||| | || |||||||||||||||||||||||    
T  21100057 ggacatcatttcttagtccggataatccgacaccttgcctttgttgctcggtgtttatcctctctacctcattgtgtatccatgcccatctttcattgtt 21100156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 19766467 - 19766371
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || || ||||||||||| ||||||| |||||||||||||||| | |  ||||| ||||||||||||||||||||| ||||    
T  19766467 ggacatcattccttagtcccgacaattcaacaccttgccttttttgctcggtgcttatcttctcgacctctgtttgcatccatgcccatcttgcatt 19766371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 259
Target Start/End: Complemental strand, 21826333 - 21826100
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatc------tttcatt-gttg-----tcgttatgg 125  Q
    |||||||||||| |||||||||||||||||| |||||||||  ||||| || | ||||||||||||||      ||||||| |||      || | ||||    
T  21826333 taattcaacaccttgcctttgttgctcggtggttatcctttcgacctcggtattcatccatgcccatcgtgcattttcatttgtttcaccttcatcatgg 21826234  T
Q  126 tcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttc-atgt--acctgtaatccatcaccaacatacaacaaat 222  Q
    |||| | ||||||| ||||||||||| ||||||||||| || ||   || |||||||| ||| ||||  ||||||    |||||  ||||||||||||||    
T  21826233 tcatggtgctcctcatcatggtgcatttgtgcaccttcctcttc---ttcattatgctgttctatgtgcacctgtgggtcatcattaacatacaacaaat 21826137  T
Q  223 tttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||| |||||||||| |||||||||||||||||||||    
T  21826136 tttcttccacctcggtgttagtccgagatgggttagg 21826100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 19766261 - 19766180
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||    
T  19766261 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtctgagatgggttagaaagta 19766180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 29333356 - 29333294
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||    
T  29333356 catcaacaacatacaacaaattttcttccacctcggtgttagttcgagatgggttagaaagta 29333294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 29333580 - 29333484
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || || ||||||||||  ||| || ||||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  29333580 ggacatcattccttagtcccgacaattcaacactttgcgttagttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 29333484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 22832012 - 22831958
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgct 70  Q
    |||||||||||||||||| || |||||||||| | ||||||||||||||||||||    
T  22832012 ggacatcatttcttagcctgggtaattcaacatcttgcctttgttgctcggtgct 22831958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 20001281 - 20001194
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || |  |||||||||||||||||    
T  20001281 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaactttggtttgcatccatgccca 20001194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 22109930 - 22109622
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22109930 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 22109831  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22109830 gtcgttatggtcatggggctcttcttcatggtgcatgtgggcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 22109731  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22109730 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 22109631  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  22109630 tcttaatga 22109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 15253316 - 15253007
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacct-cagtttgcatccatgcccatctttcattgt 114  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  15253316 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctgcggtttgcatccatgccaatctttcattgt 15253217  T
Q  115 tgtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacata 214  Q
     |  ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15253216 cggtgttatggtcatggggctcctcttcatggagcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacata 15253117  T
Q  215 caacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtga 314  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15253116 caacaaattttcctccacctcggggttagtccgagatggattaggaagtagaaacaaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtga 15253017  T
Q  315 atcttaatga 324  Q
    ||||||||||    
T  15253016 atcttaatga 15253007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 259
Target Start/End: Original strand, 15261352 - 15261585
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttca-------ttgtt-----gtcgttatgg 125  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||| || | |||||||||||||||| ||       |||||      || | ||||    
T  15261352 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcggtattcatccatgcccatcttgcattttcatttgtttcaccttcatcatgg 15261451  T
Q  126 tcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttc-atgt--acctgtaatccatcaccaacatacaacaaat 222  Q
    |||| | ||||||| ||||||||||| ||||||||||| || |   ||| |||||||| ||| ||||  ||||||    |||||  ||||||||||||||    
T  15261452 tcatggtgctcctcatcatggtgcatttgtgcaccttcctctt---cttcattatgctgttctatgtgcacctgtgggtcatcattaacatacaacaaat 15261548  T
Q  223 tttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||| |||||||||| |||||||||||||||||||||    
T  15261549 tttcttccacctcggtgttagtccgagatgggttagg 15261585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 3353587 - 3353491
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |  ||||| || |||||||||||||||||| ||||    
T  3353587 ggacatcattccttagtcccgacaattcaacaccttgcctttgttgctcggtacttatcctctcgacctcggtgtgcatccatgcccatcttgcatt 3353491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 15864475 - 15864206
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatcttt------c 109  Q
    ||||||| |||| ||| ||||||||||||||||| || | ||||||||| ||||||||||| |  |||||| | || ||||||| ||||||||      |    
T  15864475 ggacatcgtttcgtagtccggataattcaacaccttgtcattgttgctcagtgcttatcctctcaacctcattgtgtatccatgtccatcttttattttc 15864376  T
Q  110 attgttgtcg------ttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
    ||||||| |       | |||||||| | ||||||| ||||||||||  ||||||||||| || || ||   | |  |||||||||| ||||||    ||    
T  15864375 attgttgcctccagcatcatggtcatggtgctcctcatcatggtgcaaatgtgcaccttcctcttctcccacaatgggctcttcatgcacctgtggatca 15864276  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||  ||||||||| ||| |||| |||||||||| |||||||||||||||||||||||||| || |||||    
T  15864275 tcaataacatacaaaaaaatttcttccacctcggtgttagtccgagatgggttaggaagtacaattaaaa 15864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 3353364 - 3353302
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||| ||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  3353364 catcaacaacatacaacaaattttcttccacctcggtgttagttcgagatgggttaggaagta 3353302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 13821654 - 13821597
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  13821654 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 13821597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 11497844 - 11497931
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || |||||||||||||||||    
T  11497844 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgccca 11497931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 15349075 - 15349162
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || |||||||||||||||||    
T  15349075 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgccca 15349162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 18291003 - 18290908
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcat 111  Q
    ||||||| ||||||||||||   | ||||||||| || | |||||||||||||| | | ||||| || || ||||||||||||||||||| |||||    
T  18291003 ggacatcgtttcttagcccgatcatttcaacaccttgtcattgttgctcggtgcatgttctttgaacttcggtttgcatccatgcccatcgttcat 18290908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 13821854 - 13821788
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||||| ||   ||||||||||||||||    
T  13821854 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatctt 13821788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 24856488 - 24856796
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24856488 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 24856587  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24856588 gtcgttatggtcatggggctcttcgtcatggtgcatgtgggcaccttcttcttcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 24856687  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  24856688 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataatagtggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 24856787  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  24856788 tcttaatga 24856796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 117 - 324
Target Start/End: Original strand, 8725346 - 8725553
Alignment:
Q  117 tcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacataca 216  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8725346 tcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcgtcttcaccttgattatgctcttcatgtacctgtaatccatcaccaacataca 8725445  T
Q  217 acaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaat 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||||||||||||||||| ||| ||||    
T  8725446 acaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaacaaaagaggtaaacgaaattgaagtgcataagtcatgggagggagaat 8725545  T
Q  317 cttaatga 324  Q
    ||||||||    
T  8725546 cttaatga 8725553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 16 - 315
Target Start/End: Complemental strand, 18010816 - 18010519
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||| |||||||  ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  18010816 ggacatcgtttcttaaaccggataattcgacaccttgcctctgttgctcggtgcttatcctttgtacctcattttgcatccatgcccatctttcattgtg 18010717  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatc----catcaccaac 211  Q
    ||  | |||||    | |||  || |||| ||||| ||||| |||| || | |||||||||| ||||||||| |||||||||   |    ||||||||||    
T  18010716 gttttcatggt----gtgct--tcctcattgtgcaagtgtgtacctcctgcctcaccttgataatgctcttcctgtacctgtggacggaccatcaccaac 18010623  T
Q  212 atacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtggg 311  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||| ||||||   |||||| ||||||||||||||||||||     
T  18010622 atacaacaaattttcttccaccttggtgttagtccgagatgggttaggaagtagaaagaaaataggtatattaagttggagtgcataagtcatgggtgga 18010523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 264
Target Start/End: Complemental strand, 18447174 - 18446918
Alignment:
Q  20 atcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgttgtcg 119  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||||| |  | |    
T  18447174 atcatttcggagccctgataattcaacaccttgcctttgttgctcggtgcttatcctttcaacctcggtttgtatccatgtccatctttcattatcattg 18447075  T
Q  120 tt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcac 207  Q
    ||            |||||||| | ||||||| || ||||||| |||||||||||| || || ||   | | |||||||||||||||||  | |||||||    
T  18447074 tttccttcggtttcatggtcatggtgctcctcctcttggtgcaagtgtgcaccttcctcttctccaataatgtgctcttcatgtacctgcgaaccatcac 18446975  T
Q  208 caacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  18446974 caacatacaacaaattttcttccacctcggtgttagttcgagatgggttaggaagta 18446918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 25966613 - 25966518
Alignment:
Q  17 gacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| |  || ||||||||||||||||| |||||||||||    
T  25966613 gacatcatttcttagcccagataattcaacaccttgtctttgttgctcggtgcttatcctctcaacttcagtttgcatccatgctcatctttcatt 25966518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 21561694 - 21561790
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || || ||||||||||| |||||||||||||||||||||||||| |  |||||  | |||||||||||||||||| ||||    
T  21561694 ggacatcattccttagtcctgacaattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcgatatgcatccatgcccatcttgcatt 21561790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 23518981 - 23519069
Alignment:
Q  15 tggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||||||||||||||| ||| | ||||||||| || ||||||| |||||||||||| ||||| || || |||||||||||||||||    
T  23518981 tggacatcatttcttagcctggagatttcaacaccttgtctttgttactcggtgcttattctttgaacttcggtttgcatccatgccca 23519069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 21561926 - 21561981
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  21561926 aacatacaacaaattttcttccacctcggtgttagtccgaaatgggttaggaagta 21561981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 30672990 - 30673065
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttg 91  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||||| | |||||||| |  |||||||||||    
T  30672990 ggacatcatttcctagcccggataattcaacacctttcctttgttgctcgattcttatcctctcaacctcagtttg 30673065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 19586818 - 19586905
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| |||||||||||||  | ||||||||| || |||||||| ||||||| ||| ||||| || || |||||||||||||||||    
T  19586818 ggacatcgtttcttagcccggccatttcaacaccttgtctttgttgttcggtgcatattctttgaacttcggtttgcatccatgccca 19586905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 29685509 - 29685447
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||||| || ||||||||||||||| |||||||||| || || |||||||||||||||||    
T  29685509 ttcaacaccttgtctttgttgctcggtgattatcctttgaacttcggtttgcatccatgccca 29685447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 20017709 - 20017766
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  20017709 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 20017766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 22167024 - 22167081
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  22167024 catcatcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 22167081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 22768605 - 22768656
Alignment:
Q  208 caacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  22768605 caacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 22768656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 20017509 - 20017575
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||||| ||   ||||||||||||||||    
T  20017509 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatctt 20017575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 22166824 - 22166890
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||||| ||   ||||||||||||||||    
T  22166824 ttcaacaccttgcctttgttgctcggtgcttattctttcgacctcggtagtcatccatgcccatctt 22166890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 11218579 - 11218491
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccat 104  Q
    |||||||||| ||||| || || ||||||||||| | | || ||| || |||||||||||| |  |||||||| |||||||||||||||    
T  11218579 ggacatcattccttagtccagacaattcaacaccttacattagttactaggtgcttatcctctcgacctcagtatgcatccatgcccat 11218491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 17818499 - 17818415
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgc 100  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||| | | | ||||| || |||||||||||||||||    
T  17818499 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtacatgttctttgaacttcagtttgcatccatgc 17818415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 22062742 - 22062829
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || ||||||||| |||||||    
T  22062742 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 22062829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 20168978 - 20168921
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| |||| |||||||||||| | |||||||||| |||||| |||| |||||||||    
T  20168978 catcagcaacgtacaacaaatttgcttccacctcggtgttagttcgaggtgggttagg 20168921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 20236451 - 20236143
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  20236451 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcttttattgtt 20236352  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20236351 gtcattatggtcatggggttcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 20236252  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  20236251 aacaaatttttctccaccttggggttagtccgagatgggttaggaagtagaaacaaaagaggtatgcgaagctgaagtgcataagtcatgggtgggtgaa 20236152  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  20236151 tcttaatga 20236143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 277
Target Start/End: Original strand, 19876918 - 19877191
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt--- 112  Q
    |||||||||||||||||| ||| | ||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       
T  19876918 ggacatcatttcttagcctggagagttcaacaccttgtctttgttgctcggtgcttatcctttggacctcagtttgcatccatgcccatctttcatttgc 19877017  T
Q  113 ---gttgtc------gttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
       |||  |      || |||||||| | ||||||| |||||||||| || |||||||||||| ||||||  ||| ||||| ||||||||||||    ||    
T  19877018 aaagtttcctccggtgtcatggtcatggtgctcctcatcatggtgcaagtttgcaccttcttcctcacctgcattttgctcctcatgtacctgtggatca 19877117  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagagg 277  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  19877118 tcaccaacatacaacaagttttcttccacctcggtgttagtccgagataggttagaaagtagaaataaaagagg 19877191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 8651994 - 8651726
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||| |||  ||||| || ||||||||||||||||||||||| |     
T  8651994 ggacatcatttcttagcccg-atagttcaacacattgcctttgttgctcggtgcttatcatttcaacctcggtgtgcatccatgcccatctttcattctc 8651896  T
Q  116 gtcgtta------------tggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||             | ||||| | |||| || | |||||||| |||||||||||| || || |    ||| |||||||||||||| ||| | |||    
T  8651895 attgtttcctccggcatcctcgtcatggtgctcatcataatggtgcaagtgtgcaccttcctcttctctaacattgtgctcttcatgtacttgtgaacca 8651796  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||| |||||||||||| || |||||    
T  8651795 tcaccaacatacaacaaattttcttccacctcagtgttagtccgagataggttaggaagtataattaaaa 8651726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 263
Target Start/End: Original strand, 20072176 - 20072435
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||| ||||||| ||| ||||||||| | ||||| |||||||||| ||||||| ||||||| | ||||||| | || |||||||||||||||||||||||    
T  20072176 ggacctcatttcatagtccggataatccgacaccttgcctttgtttctcggtgtttatcctctctacctcattgtgtatccatgcccatctttcattgtt 20072275  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | | |            | |||||| | ||||||| |  |||||||| |||||||| ||  | ||||||||||||| ||||| |||||| |||    ||    
T  20072276 attgattcctccgacatcagggtcatggtgctcctcattttggtgcatttgtgcaccatccgcttcaccttgattatactctttatgtacttgtgggtca 20072375  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagt 263  Q
    ||| |||||||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  20072376 tcatcaacatacaaaaaattttcttccacctcggtgttagtccgagatgggttaggaagt 20072435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 8948863 - 8948954
Alignment:
Q  182 ctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||||||||| ||  | |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| || |||||    
T  8948863 ctcttcatgtacttgcgaaccatcaccaacatacaacaaattttcttcaacctcggtgttagtccgagatgggttaggaagtataattaaaa 8948954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 20392230 - 20392180
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20392230 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 20392180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 3989058 - 3988962
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || || ||||||||||| |||||| |||||| |||||||||||| |   |||| || |||||||||||||||||| ||||    
T  3989058 ggacatcattccttagtcccgacaattcaacaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcatt 3988962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 20392440 - 20392373
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatc 105  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||  | | ||||||||||||||    
T  20392440 taattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcgatattcatccatgcccatc 20392373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 3988854 - 3988792
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||| |||||||||||| |||||| ||||||| || |||||||||||||||||||| |||||    
T  3988854 catcaacaacatacaacatattttcttccaccttggtgttagtccgagatgggttagaaagta 3988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 8948796 - 8948853
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttat 73  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||||||    
T  8948796 ggacatcatttcgtagtccggataactcaacaccttgcctttgttgttcggtgcttat 8948853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 264
Target Start/End: Complemental strand, 19783845 - 19783716
Alignment:
Q  135 tcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacct 234  Q
    |||||||| ||||||| |||||||||||| |||||  | | ||  || ||| |||| ||||||    |||||  |||||||||||||||||| |||||||    
T  19783845 tcctcttcttggtgcaagtgtgcaccttcctcgtcttcattatcgtgttctacatgcacctgtgggtcatcattaacatacaacaaattttcttccacct 19783746  T
Q  235 cggggttagtccgagatgggttaggaagta 264  Q
    ||| ||||||| ||||| |||||| |||||    
T  19783745 cggtgttagtcagagataggttagaaagta 19783716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 21800143 - 21800200
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    ||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  21800143 catcagcaacatacaacaaatttgcttccacctcggtgttagttcgagatgggttagg 21800200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 16383575 - 16383635
Alignment:
Q  54 ctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgt 114  Q
    |||||||||| ||||||||||||||| |  || |||||||||||||||||||  |||||||    
T  16383575 ctttgttgcttggtgcttatcctttggatttcggtttgcatccatgcccatcgatcattgt 16383635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 21785674 - 21785761
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||| ||||   | ||||||||| || |||||||||||||||| | | ||||| || || |||||||||||||||||    
T  21785674 ggacatcgtttcttaacccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgccca 21785761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 27045850 - 27045763
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || ||||||||| |||||||    
T  27045850 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgccca 27045763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 21799943 - 21800009
Alignment:
Q  41 ttcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||| |||||||||||||||||| |||| ||||  ||||| ||   ||||||||||||||||    
T  21799943 ttcaacaccttgcctttgttgctcggtgtttattctttcaacctcggtagtcatccatgcccatctt 21800009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 13008 - 12700
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  13008 ggacatcatttcttagcttggataattcaacaccttgtctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatcttacattgtc 12909  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12908 ggcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcttcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 12809  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  12808 aactaattttcctccacctcggggttagtccgagatgggttaggaagtagaaacaaaagaggtatacgaagttgaagtgcataagtcatgggcgggtgaa 12709  T
Q  316 tcttaatga 324  Q
    |||||||||    
T  12708 tcttaatga 12700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 5076 - 4805
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  5076 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtc 4977  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4976 ggcgttatggtcatggggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 4877  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagt 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  4876 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaacaaaagaggtatacgaagt 4805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1571 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 286
Target Start/End: Complemental strand, 1592 - 1322
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1592 ggacatcatttcttagcccagataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattgtt 1493  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1492 gtcgttatggtcatggggctcttcttcatggtgcatgtgggcaccctcttcgtcaccttgattatgttcttcatgtacctgtaatccatcaccaacatac 1393  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaag 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1392 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtaaaaataaaagtggtatgcgaag 1322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 115616 - 115309
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||     
T  115616 ggacatcatttcttagcccggataattcaacaccttgcctt-gttgctcggtgcttatcctttgttcctcggtttgcatccatgctcatctttcattgtc 115518  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | | |||||||||| ||||| ||||||||||||||||| || |||||| || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  115517 ggcattatggtcatggggcttctcttcatggtgcatgtttgtaccttcctcttcaccttgattatgctcttcatgtacctgtgatccatcaccaacatac 115418  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  115417 aacaaatttgcctccacctcggtgttaatccgagatgggttaggaagcagaaacaaaagaggtatacgaagtttaagtgcataagtcatgggtggatgaa 115318  T
Q  316 tcttaatga 324  Q
     ||||||||    
T  115317 gcttaatga 115309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 119920 - 119613
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||     
T  119920 ggacatcatttcttagcccggataattcaacaccttgcctt-gttgctcggtgcttatcctttgttcctcggtttgcatccatgctcatctttcattgtc 119822  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | | |||||||||| ||||| ||||||||||||||||| || |||||| || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  119821 ggcattatggtcatggggcttctcttcatggtgcatgtttgtaccttcctcttcaccttgattatgctcttcatgtacctgtgatccatcaccaacatac 119722  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  119721 aacaaatttgcctccacctcggtgttaatccgagatgggttaggaagcagaaacaaaagaggtatacgaagtttaagtgcataagtcatgggtggatgaa 119622  T
Q  316 tcttaatga 324  Q
     ||||||||    
T  119621 gcttaatga 119613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 10387 - 10079
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||| |||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |     
T  10387 ggacattatttctaaacccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcggtttgcatccatgcccatctttcattttc 10288  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | | |||||||||| | ||||||||||| |||||| || ||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||    
T  10287 ggcattatggtcatggtgctcctcttcacggtgcacgtttgcaccttcctccttaccttgattatgctcttcatgtacctgtgatccatcaccaacatac 10188  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||| | |||||||| | ||||||||||||||||| |||||||||||| |||||||||||    |||| || | |||| ||||||||||| ||||    
T  10187 aacaaatttgcttccacctcagtgttagtccgagatgggtcaggaagtagaaacaaaagaggtatattgagtttaatttcatatgtcatgggtggatgaa 10088  T
Q  316 tcttaatga 324  Q
     ||||||||    
T  10087 gcttaatga 10079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 16 - 324
Target Start/End: Complemental strand, 11499 - 11191
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |     
T  11499 ggacatcatttcttagcccgaataattcaacaccttgcctttgttgttcggtgcttatcctttgtacctcggtttgcatccatgcccatcttgcattttc 11400  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    | | | ||||||||   |||||||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  11399 ggcatcatggtcatgatgctcctcttcatggtgcaagtgtgcaccgtcctcctcaccttgattatgctcttcatgtacctgtgatccatcaccaacatac 11300  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||  | |||||||||| |||||||||||||||||||| ||||||||| ||||| || |     |||| |||||||||||||||||||||  |||    
T  11299 aacaaattcgcttccacctcggtgttagtccgagatgggttagaaagtagaaacaaaaggggcacatttagtttaagtgcataagtcatgggtggacgaa 11200  T
Q  316 tcttaatga 324  Q
     ||||||||    
T  11199 gcttaatga 11191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1620 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold1620
Description:

Target: scaffold1620; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 16 - 315
Target Start/End: Original strand, 239 - 532
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||| |||||||||||||||| |||  | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  239 ggacatcgtttcttagcccggatagttcctcgccttgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtc 338  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    || || |||||    | |||  || |||| ||||| || |||||||||  | |||||||||||||||||||| |||| |||  | |||| ||||||||||    
T  339 gtggtcatggt----gtgct--tcctcattgtgcaagtttgcaccttccgcctcaccttgattatgctcttcttgtatctgcgaaccattaccaacatac 432  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||| | |||||||| | |||||||||||||||||||||||||||||| |||||| | |||  ||||||||||||||||||||||||||| ||||    
T  433 aacaaatttgcttccacctccgtgttagtccgagatgggttaggaagtagaaacaaaagaagcatgttaagttgaagtgcataagtcatgggtggatgaa 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1879 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold1879
Description:

Target: scaffold1879; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 315
Target Start/End: Original strand, 166 - 459
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||| |||||||  ||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||     
T  166 ggacatcgtttcttaaaccggataattcgacaccttgcctctgttgctcggtgctaatcctttgtacctcattttgcatccatgcccatctttcattgtg 265  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
     |  | |||||    | |||  |  |||| ||||| |||||||||| || |  ||||||||| ||||||||| |||||||||   |||||||||||||||    
T  266 tttttcatggt----gtgct--ttctcattgtgcaagtgtgcacctcctgccccaccttgataatgctcttcctgtacctgtggaccatcaccaacatac 359  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| ||||||   ||||||||||||||||||||||||||| ||||    
T  360 aacaaattttcttccacctcggtgttagtccgagatgggttaggaagtagaaacaaaataggtatattaagttgaagtgcataagtcatgggtggatgaa 459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 324
Target Start/End: Original strand, 38984 - 39286
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||| |||||||  ||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  38984 ggacatcgtttcttaaaccggatagttcgacaccttgcctttgttgctcggtgctaatcctttgtacctcagtttgcatccatgcccatctttcattgtg 39083  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatac 215  Q
    ||  | |||||      || | || ||||  | ||  | ||||||| |  | |||||||||| ||||||||||| ||||| |   |||||||||||||||    
T  39084 gtaatcatggt------gcgcttcctcattatacaaatatgcacctccaacctcaccttgataatgctcttcatatacctatggaccatcaccaacatac 39177  T
Q  216 aacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||| | |||||||||| |||||||| ||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||| ||||    
T  39178 aacaaatttgcttccacctcggtgttagtccaagatgggttaggaagtagaaacaaaagaggtacgttaagttgaagtgcataagtcatgggtggatgaa 39277  T
Q  316 tcttaatga 324  Q
      |||||||    
T  39278 gtttaatga 39286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 6856 - 6596
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt--- 112  Q
    |||||||||||||||||||| ||||||||||| | ||| ||| |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||       
T  6856 ggacatcatttcttagcccgaataattcaacatcttgcttttattgctcggtgcttatcatttgtacctcagtttacatccatgccgatctttcattttc 6757  T
Q  113 ---gtt------gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
       |||      | | | |||||||| | ||||||| |||||||||| |||||||||||| || || ||   ||| ||| |||||||||||||| | |||    
T  6756 aaagtttcctccggcatcatggtcatggtgctcctcatcatggtgcaagtgtgcaccttcctcttctccagcattgtgcacttcatgtacctgtgaacca 6657  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  6656 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagta 6596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 315
Target Start/End: Complemental strand, 55080 - 54912
Alignment:
Q  147 tgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtcc 246  Q
    |||| |||||||||| || | |||||||||| ||||||||| | |||||||   |||||||||||||||||||||||| | |||||||||| |||| |||    
T  55080 tgcaagtgtgcacctcctgcctcaccttgataatgctcttcctatacctgtggaccatcaccaacatacaacaaatttgcttccacctcggtgttaatcc 54981  T
Q  247 gagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    |||||||||||||||||||||| |||| ||||||   ||||||||||||||||||||||||||| ||||    
T  54980 gagatgggttaggaagtagaaacaaaataggtatattaagttgaagtgcataagtcatgggtggatgaa 54912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 32822 - 32968
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  32822 ggacatcatttcttagcccggatagttcaacaccttgcctt-gttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattttc 32920  T
Q  116 gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttc 163  Q
      | | |||||||| | || ||||||||||||||| || |||||||||    
T  32921 agcatcatggtcatggtgcccctcttcatggtgcaagtttgcaccttc 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 32965 - 33091
Alignment:
Q  184 cttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaagaggtatgcg 283  Q
    ||||||||| |||| | |||||||||||||||||||||||| | |||||||||| |||||| ||||||||||||||||||||||| |||||||| ||       
T  32965 cttcatgtagctgtgaaccatcaccaacatacaacaaatttgcttccacctcggtgttagtgcgagatgggttaggaagtagaaacaaaagaggcatatt 33064  T
Q  284 aagttgaagtgcataagtcatgggtgg 310  Q
     ||||  ||||||||||||||||||||    
T  33065 gagtttgagtgcataagtcatgggtgg 33091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 94 - 1
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttc 109  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  94 ggacatcatttcttagcccggataattcaacaccttgcctttgttgctcggtgcttatcctttgtacctcagtttgtatccatgcccatctttc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 261
Target Start/End: Complemental strand, 21888 - 21631
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt--- 112  Q
    ||||||| || |||||||||| || ||||||||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||       
T  21888 ggacatcgttccttagcccggttatttcaacaccttgcctttgttgttcggtgcttatcctctgaacctccgtttgcatccatgcccatctttcattaac 21789  T
Q  113 ---gtt------gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
       |||      | | | ||||| ||     ||||| |||||||||| || ||||||||| || |||||| |||| ||||| ||||| ||||||    ||    
T  21788 aaagttcccttcggcatcatggtgatgaaattcctcatcatggtgcaagtttgcaccttcctcctcacctagattgtgctcctcatgaacctgtggaaca 21689  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaa 261  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  21688 tcaccaacatacaacaaattttcttccacctcggtgttattccgagatgggttaggaa 21631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 44404 - 44144
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||  ||||| |||||||||||||  ||||||||||||||||||||||||||||  ||||| ||||  ||||||| |||| ||||||| |     
T  44404 ggacatcatttcggagccctgataattcaacactttgcctttgttgctcggtgcttatcctttcaacctcggtttatatccatgtccatatttcattatc 44305  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||            |||||||| | ||| |||  | ||||||| |||||||||||| || || ||   | | |||||||||||||||||  | |||    
T  44304 attgtttcctccggtttcatggtcatggtgcttctccacttggtgcaagtgtgcaccttcctcttctccaataatgtgctcttcatgtacctgcgaacca 44205  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  44204 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagta 44144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 51793 - 51533
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    ||||||||||||  ||||| |||||||||||||  ||||||||||||||||||||||||||||  ||||| ||||  ||||||| |||| ||||||| |     
T  51793 ggacatcatttcggagccctgataattcaacactttgcctttgttgctcggtgcttatcctttcaacctcggtttatatccatgtccatatttcattatc 51694  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||            |||||||| | ||| |||  | ||||||| |||||||||||| || || ||   | | |||||||||||||||||  | |||    
T  51693 attgtttcctccggtttcatggtcatggtgcttctccacttggtgcaagtgtgcaccttcctcttctccaataatgtgctcttcatgtacctgcgaacca 51594  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  51593 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagta 51533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 132597 - 132331
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||||||  ||||| ||||||||||||| |||||||||||| |     
T  132597 ggacatcattccttagtcccgataattcaacaccttgccttagttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcattatc 132498  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
     | |||            |||||||| | | |||| ||| |||||||  ||||||||||| |  ||   |  | | |||||||||||||||||  | | |    
T  132497 attgtttccttcggtttcatggtcatggtgatccttttcttggtgcaattgtgcaccttccttttc---tataatgtgctcttcatgtacctgcgaacta 132401  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| || |||||    
T  132400 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagtataattaaaa 132331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 17340 - 17253
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || |||||||||||||||||    
T  17340 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatccatgccca 17253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 263
Target Start/End: Original strand, 8390 - 8512
Alignment:
Q  141 tcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggt 240  Q
    |||||||||| ||||||| | ||  | ||||||||||||||||||||||||||||||    ||||| ||||||||||||||||||| |||||||||| ||    
T  8390 tcatggtgcaagtgtgcatcatccgcttcaccttgattatgctcttcatgtacctgtgggtcatcatcaacatacaacaaattttcttccacctcggtgt 8489  T
Q  241 tagtccgagatgggttaggaagt 263  Q
    |||||||||||||||||||||||    
T  8490 tagtccgagatgggttaggaagt 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 8228 - 8328
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtg-cttatcctttgtacctcagtttgcatccatgcccatctttcattgt 114  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||||||||||  ||||||| | ||||||| | || ||||||||||||||||||||||    
T  8228 ggacatcatttcttagtccggataatccgacaccttgcctttgttgctcggtgttttatcctctctacctcattgtgtatccatgcccatctttcattgt 8327  T
Q  115 t 115  Q
    |    
T  8328 t 8328  T

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Target: scaffold0833 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 4620 - 4705
Alignment:
Q  239 gttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaatcttaatga 324  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  4620 gttagtccgagatgggttaggaagcagaaacaaaagaggtatacgaagttgaagtgcataagtcatgggtggatgaagcttaatga 4705  T

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Target: scaffold0059 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 180 - 273
Target Start/End: Complemental strand, 10941 - 10848
Alignment:
Q  180 tgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||| || |||||    
T  10941 tgctcttcatgtacctgtgaaccatcaccaacatacaacaaattttcttccacctcgttgttagtccgagatgggttaggaagtataattaaaa 10848  T

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Target: scaffold0059; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 180 - 273
Target Start/End: Complemental strand, 18942 - 18849
Alignment:
Q  180 tgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||| || |||||    
T  18942 tgctcttcatgtacctgtgaaccatcaccaacatacaacaaattttcttccacctcgttgttagtccgagatgggttaggaagtataattaaaa 18849  T

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Target: scaffold0013 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 234457 - 234550
Alignment:
Q  180 tgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||| || |||||    
T  234457 tgctcttcatgtacctgtgaaccatcaccaacatacaacaaattttcttccacctcgttgttagtccgagatgggttaggaagtataattaaaa 234550  T

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Target: scaffold1095 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 2072 - 1986
Alignment:
Q  178 tatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||||||  |  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  2072 tatgctcttcatgtacctgcgaatcatcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagta 1986  T

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Target: scaffold1095; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 2246 - 2153
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttc 109  Q
    ||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||    
T  2246 ggacatcatttcggagcccggataattcaacatcttgcctttgttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttc 2153  T

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Target: scaffold0156 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 264
Target Start/End: Original strand, 7738 - 7998
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcattgtt 115  Q
    |||||| |||||  || ||||||| ||||||||| ||||||||||| ||||||||||||||||  ||||| ||||||||||||| |||||||||||  |     
T  7738 ggacattatttcggagtccggatagttcaacaccttgcctttgttgttcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcatgatc 7837  T
Q  116 gtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
    || |||            |||| ||| | ||||||| |||||||||| ||||||| ||||  | ||  |   | | |||||||||||||| ||  |  |     
T  7838 gttgtttcctccgatatcatggccatggtgctcctcctcatggtgcaagtgtgcatcttccgcttcttccacaatgtgctcttcatgtacttgcgagtcg 7937  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  7938 tcaccaacatacaacaaattttcttccagctcggtgttagtccgagatgggttaggaagta 7998  T

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Target: scaffold0346 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 4854 - 4930
Alignment:
Q  35 ggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcat 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||    
T  4854 ggataattcaacaccttgcctttgttgctcggtgcttatcctttcaacctcggtttgcatccatgtccatctttcat 4930  T

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Target: scaffold0346; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 5035 - 5104
Alignment:
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagtagaaataaaa 273  Q
    |||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| || |||||    
T  5035 tcaccaacatacaacaaattctcttccacctcggtgttagtccgagatgggttaggaagtaaaattaaaa 5104  T

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Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 264
Target Start/End: Original strand, 19219 - 19479
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttca----- 110  Q
    |||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||| |  ||||| |  |||||||||||||||||| ||         
T  19219 ggacatcatttcttagtcccgacaattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggcatgcatccatgcccatcttgcattttc 19318  T
Q  111 --ttgtt-----gtcgttatggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcca 203  Q
      |||||     | | | | ||| ||   ||||||| ||||||||||  ||||||||||||||  |  | | ||  || ||||||||||  |||    ||    
T  19319 atttgtttctccggcatcacggtaatgatgctcctcatcatggtgcaattgtgcaccttcttccccttcatcatcgtgttcttcatgtatttgtgggtca 19418  T
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  19419 tcatcaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagta 19479  T

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Target: scaffold0004; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 253240 - 253300
Alignment:
Q  204 tcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  253240 tcaccaacatacaacaaattttcttccacctcggtgttagtccgagatgggttaggaagta 253300  T

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Target: scaffold0004; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 253129 - 253191
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatccttt 78  Q
    ||||||||||| | || ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  253129 ggacatcatttatgagtccggatagttcaacaccttgcctttgttgctcggtgcttatccttt 253191  T

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Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 24541 - 24449
Alignment:
Q  15 tggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctt 107  Q
    ||||||||||| ||||| ||   |||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||    
T  24541 tggacatcattccttagtcccattaattcaacaccttgcctttgttgctcggtgcttatcctttcgacctcagtatgcatccattcccatctt 24449  T

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Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 24308 - 24258
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  24308 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 24258  T

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Target: scaffold0506 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 264
Target Start/End: Original strand, 3443 - 3572
Alignment:
Q  135 tcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacct 234  Q
    |||||||| ||||||| |||||||||||| |||||  | | ||  || ||| |||| ||||||    |||||  |||||||||||||||||| |||||||    
T  3443 tcctcttcttggtgcaagtgtgcaccttcctcgtcttcattatcgtgttctacatgcacctgtgggtcatcattaacatacaacaaattttcttccacct 3542  T
Q  235 cggggttagtccgagatgggttaggaagta 264  Q
    ||| ||||||||||||||||||||||||||    
T  3543 cggtgttagtccgagatgggttaggaagta 3572  T

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Target: scaffold0506; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 3300 - 3396
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || |  ||||||||||| |||||||||||||||||||||||||| |   |||| || |||||||||||||||||| ||||    
T  3300 ggacatcattccttagtcccgtcaattcaacaccttgcctttgttgctcggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcatt 3396  T

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Target: scaffold0273 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 24122 - 24041
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  24122 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 24041  T

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Target: scaffold0142 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 22443 - 22524
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  22443 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 22524  T

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Target: scaffold0142; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 22237 - 22333
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || || ||||||||||| |||||| |||||| |||||||||||| |   |||| || |||||||||||||||||| ||||    
T  22237 ggacatcattccttagtcccgacaattcaacaccttgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcatt 22333  T

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Target: scaffold0029 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 122144 - 122063
Alignment:
Q  183 tcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||||||||||||    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  122144 tcttcatgtacctgtggatcatcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 122063  T

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Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 122342 - 122246
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||| ||| ||||| || || ||||||||||| | |||| |||||| |||||||||||  |   |||| || |||||||||||||||||| ||||    
T  122342 ggacattattccttagtcccgacaattcaacaccttaccttagttgcttggtgcttatcccctcggcctcggtatgcatccatgcccatcttgcatt 122246  T

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Target: scaffold0018 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 264
Target Start/End: Original strand, 19652 - 19781
Alignment:
Q  135 tcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatccatcaccaacatacaacaaattttcctccacct 234  Q
    |||||||| ||||||| |||||||||||| ||| |  | | ||  || ||||||||||||| |    ||||| ||||||||||||||||||| |||||||    
T  19652 tcctcttcttggtgcaagtgtgcaccttcctcgccttcatcatcgtgttcttcatgtacctatggatcatcaacaacatacaacaaattttcttccacct 19751  T
Q  235 cggggttagtccgagatgggttaggaagta 264  Q
    ||| |||||||||||||||||||| |||||    
T  19752 cggtgttagtccgagatgggttagaaagta 19781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 19513 - 19573
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcct 76  Q
    |||||||||| ||||| || |||||||||||||| |||||||| |||||||||||||||||    
T  19513 ggacatcattccttagtcccgataattcaacaccttgcctttgatgctcggtgcttatcct 19573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 1110 - 850
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatcttt-cattgt 114  Q
    |||||||||| ||||| || || ||||||||||| |||||| |||||||| ||||||||||    ||||| || ||||||||||||||||||| |||| |    
T  1110 ggacatcattccttagtcccgacaattcaacaccttgccttagttgctcgatgcttatcctcccgacctcggtatgcatccatgcccatctttgcatttt 1011  T
Q  115 tgtcgtt------------atggtcatagggctcctcttcatggtgcatgtgtgcaccttcttcgtcaccttgattatgctcttcatgtacctgtaatcc 202  Q
    | | | |            |||||||| | ||||||| ||||||||||  ||||||||||| || ||  | | ||  || ||| |||||||||||    |    
T  1010 tattggtttctccggcatcatggtcatggtgctcctcatcatggtgcaattgtgcaccttcctcttcttcatcatcgtgttct-catgtacctgtggatc 912  T
Q  203 atcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  911 atcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 850  T

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Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 21852 - 21756
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || || ||||||||||| | |||||||||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  21852 ggacatcattccttagtcccgacaattcaacacctttcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 21756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 21622 - 21566
Alignment:
Q  208 caacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||| |||||    
T  21622 caacatacaacaaattttcttccacctcagtgttagtccgagatgggttagaaagta 21566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 12226 - 12164
Alignment:
Q  202 catcaccaacatacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  12226 catcaacaacatacaacaaattttcttccacctcggtgttagtccgagatgggttagaaagta 12164  T

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Target: scaffold0230; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 12451 - 12355
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||| ||| ||||| || || ||||||||||  |||||| |||||| |||||||||||| |   |||| || |||||||||||||||||| ||||    
T  12451 ggacataattccttagtcccgacaattcaacacattgccttagttgcttggtgcttatcctctcggcctcggtatgcatccatgcccatcttgcatt 12355  T

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Target: scaffold0078 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 29442 - 29368
Alignment:
Q  38 taattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||||| |||||||||||||||||||||||||| |  ||||| || |||||||||||||||||| ||||    
T  29442 taattcaacaccttgcctttgttgctcggtgcttatcctctcgacctcggtatgcatccatgcccatcttgcatt 29368  T

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Target: scaffold0078; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 29247 - 29197
Alignment:
Q  209 aacatacaacaaattttcctccacctcggggttagtccgagatgggttagg 259  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  29247 aacatacaacaaattttcttccacctcggtgttagtccgagatgggttagg 29197  T

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Target: scaffold0080 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 50261 - 50321
Alignment:
Q  264 agaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaatcttaatga 324  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  50261 agaaacaaaagaggtatacgaagttgaagtgcataagtcatgggtggatgaagcttaatga 50321  T

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Target: scaffold0075 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 32320 - 32380
Alignment:
Q  264 agaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaatcttaatga 324  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  32320 agaaacaaaagaggtatacgaagttgaagtgcataagtcatgggtggatgaagcttaatga 32380  T

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Target: scaffold0051 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 25655 - 25727
Alignment:
Q  40 attcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||||||||| |||||||||||||| |  |||||||| |||||||||||||||||| ||||    
T  25655 attcaacaccttgcctttgttgttcggtgcttatcctctcgacctcagtatgcatccatgcccatcttgcatt 25727  T

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Target: scaffold0051; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 25859 - 25912
Alignment:
Q  211 catacaacaaattttcctccacctcggggttagtccgagatgggttaggaagta 264  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  25859 catacagcaaattttcttccacctcggtgttagtccgagatgggttaggcagta 25912  T

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Target: scaffold0056 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 41775 - 41700
Alignment:
Q  240 ttagtccgagatgggttaggaagtagaaataaaagaggtatgcgaagttgaagtgcataagtcatgggtgggtgaa 315  Q
    ||||||||||||||||||||||||||||| |||| ||||||   |||||| ||| |||||||||||||||| ||||    
T  41775 ttagtccgagatgggttaggaagtagaaacaaaataggtatattaagttggagttcataagtcatgggtggatgaa 41700  T

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Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 90254 - 90158
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcccatctttcatt 112  Q
    |||||||||| ||||| || |  ||||||||||| |||||||||||||||||| ||||||| |   |||| || |||||||||||||||||| ||||    
T  90254 ggacatcattccttagtcccgtcaattcaacaccttgcctttgttgctcggtgtttatcctctcgtcctcggtatgcatccatgcccatcttgcatt 90158  T

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Target: scaffold0566 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 1590 - 1503
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||||||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || |||||||||||||||||    
T  1590 ggacatcatttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacatcggtttgcatccatgccca 1503  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 8503 - 8590
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| ||| ||||| || |  |||||||||||||||||    
T  8503 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatattctttgaactttggtttgcatccatgccca 8590  T

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Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 12675 - 12762
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| ||| ||||| || |  |||||||||||||||||    
T  12675 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatattctttgaactttggtttgcatccatgccca 12762  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 51778 - 51865
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgccca 103  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || |  |||||||||||||||||    
T  51778 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaactttggtttgcatccatgccca 51865  T

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Target: scaffold0220 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 9556 - 9641
Alignment:
Q  16 ggacatcatttcttagcccggataattcaacaccctgcctttgttgctcggtgcttatcctttgtacctcagtttgcatccatgcc 101  Q
    ||||||| ||||||||||||   | ||||||||| || |||||||||||||||| | | ||||| || || ||||||||| |||||    
T  9556 ggacatcgtttcttagcccgatcatttcaacaccttgtctttgttgctcggtgcatgttctttgaacttcggtttgcatcaatgcc 9641  T

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