View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_145 (Length: 312)
Name: NF9839A_low_145
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_145 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 51 - 306
Target Start/End: Original strand, 44461353 - 44461608
Alignment:
| Q |
51 |
acatcatgacaaaactcttctcggttttggttatctgtgtgattgtattggcacaccaaacagtcgcacaagaaaccaaaggtaaagatttaatcacaag |
150 |
Q |
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| T |
44461353 |
acatcatgacaaaactcttctcggttttggttatctgtgtgattgtattggcacaccaaacagtcgcacaagaaaccaaaggtaaagatttaatcacaag |
44461452 |
T |
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| Q |
151 |
ggtatgccagctagcacagaaaaacagtgacctctgtgttgaagttctgtcatccgacccaaaatccgcaaacgcagacgacattaatgatttggcaatt |
250 |
Q |
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| T |
44461453 |
ggtatgccagctagcacagaaaaacagtgacctctgtgttgaagttctgtcatccgacccaaaatccgcaaacgcagacgacattaatgatttggcaatt |
44461552 |
T |
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| Q |
251 |
atagcactaagagttgctgctagaaatgcttctgcaatgttaaacgacgtgaaatc |
306 |
Q |
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| T |
44461553 |
atagcactaagagttgctgctagaaatgcttctgcaatgttaaacgacgtgaaatc |
44461608 |
T |
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