View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_147 (Length: 312)

Name: NF9839A_low_147
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_147
NF9839A_low_147
[»] chr8 (43 HSPs)
chr8 (44-204)||(13568906-13569066)
chr8 (253-297)||(2655798-2655842)
chr8 (253-296)||(14907036-14907079)
chr8 (253-297)||(9619469-9619513)
chr8 (253-297)||(32724600-32724644)
chr8 (42-81)||(2786116-2786155)
chr8 (253-296)||(11725611-11725654)
chr8 (253-295)||(44100045-44100087)
chr8 (213-259)||(44100154-44100200)
chr8 (255-296)||(4808895-4808936)
chr8 (255-292)||(9498718-9498755)
chr8 (259-296)||(11196825-11196862)
chr8 (18-80)||(19176136-19176198)
chr8 (253-297)||(11464099-11464143)
chr8 (42-86)||(12802605-12802649)
chr8 (260-296)||(15597278-15597314)
chr8 (253-297)||(43890236-43890280)
chr8 (43-83)||(44748463-44748503)
chr8 (253-292)||(14913002-14913041)
chr8 (253-296)||(35580387-35580430)
chr8 (8-80)||(44888680-44888752)
chr8 (43-81)||(2152240-2152278)
chr8 (43-81)||(5784148-5784186)
chr8 (42-80)||(17069843-17069881)
chr8 (42-80)||(17578392-17578430)
chr8 (259-293)||(19876147-19876181)
chr8 (18-81)||(23487063-23487126)
chr8 (18-81)||(29321269-29321332)
chr8 (18-81)||(32675732-32675795)
chr8 (262-296)||(33298794-33298828)
chr8 (43-81)||(38781141-38781179)
chr8 (43-81)||(40529306-40529344)
chr8 (46-80)||(41898499-41898533)
chr8 (43-80)||(5162304-5162341)
chr8 (43-80)||(8797297-8797334)
chr8 (43-80)||(14699452-14699489)
chr8 (253-294)||(17949176-17949217)
chr8 (43-80)||(18641380-18641417)
chr8 (17-86)||(11293647-11293716)
chr8 (212-256)||(29777044-29777088)
chr8 (43-87)||(29806222-29806266)
chr8 (44-80)||(44502620-44502656)
chr8 (48-80)||(44747313-44747345)
[»] chr1 (62 HSPs)
chr1 (253-295)||(50272253-50272295)
chr1 (253-296)||(20266228-20266271)
chr1 (253-296)||(25728071-25728114)
chr1 (253-296)||(35584733-35584776)
chr1 (253-296)||(5701183-5701226)
chr1 (253-296)||(7997713-7997756)
chr1 (253-296)||(14545446-14545489)
chr1 (253-296)||(18569422-18569465)
chr1 (253-292)||(19716013-19716052)
chr1 (44-83)||(25271195-25271234)
chr1 (253-296)||(28035065-28035108)
chr1 (253-296)||(34519059-34519102)
chr1 (253-296)||(50148298-50148341)
chr1 (43-81)||(22567065-22567103)
chr1 (253-295)||(30879001-30879043)
chr1 (212-258)||(31836678-31836724)
chr1 (17-80)||(38261340-38261403)
chr1 (212-258)||(40646500-40646546)
chr1 (19-81)||(23893672-23893734)
chr1 (215-251)||(3871236-3871272)
chr1 (18-83)||(15302719-15302784)
chr1 (259-295)||(27872671-27872707)
chr1 (255-295)||(44637350-44637390)
chr1 (260-295)||(3871342-3871377)
chr1 (211-258)||(9919237-9919284)
chr1 (253-296)||(11453862-11453905)
chr1 (46-81)||(23530541-23530576)
chr1 (253-296)||(25406396-25406439)
chr1 (46-81)||(28052188-28052223)
chr1 (253-296)||(30818457-30818500)
chr1 (46-77)||(35160315-35160346)
chr1 (42-81)||(37850438-37850477)
chr1 (257-296)||(40646618-40646657)
chr1 (42-81)||(42276160-42276199)
chr1 (211-258)||(50166321-50166368)
chr1 (253-296)||(51868757-51868800)
chr1 (253-296)||(51871790-51871833)
chr1 (43-81)||(1427198-1427236)
chr1 (46-80)||(3934606-3934640)
chr1 (212-258)||(7342534-7342580)
chr1 (43-81)||(7763749-7763787)
chr1 (18-81)||(9413300-9413363)
chr1 (253-295)||(9919315-9919357)
chr1 (262-296)||(19723268-19723302)
chr1 (43-81)||(25509208-25509246)
chr1 (43-81)||(27037268-27037306)
chr1 (253-295)||(38520646-38520688)
chr1 (259-297)||(39927665-39927703)
chr1 (253-295)||(45426175-45426217)
chr1 (43-81)||(50246929-50246967)
chr1 (212-258)||(51871677-51871723)
chr1 (18-80)||(3549032-3549094)
chr1 (18-80)||(8472049-8472111)
chr1 (259-296)||(9172420-9172457)
chr1 (259-296)||(9180402-9180439)
chr1 (18-80)||(30290265-30290327)
chr1 (43-80)||(43456621-43456658)
chr1 (19-80)||(4280102-4280163)
chr1 (207-251)||(7312331-7312375)
chr1 (46-86)||(27037533-27037573)
chr1 (49-81)||(33337066-33337098)
chr1 (43-87)||(52431174-52431218)
[»] chr7 (51 HSPs)
chr7 (253-297)||(46821936-46821980)
chr7 (253-296)||(2843339-2843382)
chr7 (253-296)||(21266314-21266357)
chr7 (253-297)||(1448940-1448984)
chr7 (253-296)||(32684607-32684650)
chr7 (253-296)||(35667343-35667386)
chr7 (253-296)||(46338975-46339018)
chr7 (42-80)||(19292839-19292877)
chr7 (42-80)||(19845668-19845706)
chr7 (212-258)||(46821822-46821868)
chr7 (259-296)||(20116511-20116548)
chr7 (43-80)||(20951002-20951039)
chr7 (43-80)||(21119557-21119594)
chr7 (213-258)||(22928093-22928138)
chr7 (253-297)||(1485367-1485411)
chr7 (8-81)||(7400128-7400200)
chr7 (46-86)||(23802184-23802223)
chr7 (259-295)||(48207830-48207866)
chr7 (212-251)||(1449059-1449098)
chr7 (8-72)||(3024592-3024656)
chr7 (46-81)||(22991747-22991782)
chr7 (253-296)||(23425483-23425526)
chr7 (253-296)||(26492287-26492330)
chr7 (8-80)||(27529229-27529300)
chr7 (253-296)||(35496287-35496330)
chr7 (253-296)||(42311202-42311245)
chr7 (8-80)||(44719127-44719199)
chr7 (43-81)||(2290016-2290054)
chr7 (42-80)||(12631815-12631853)
chr7 (43-81)||(19619034-19619072)
chr7 (212-258)||(23085330-23085376)
chr7 (43-81)||(25950830-25950868)
chr7 (43-81)||(29177252-29177290)
chr7 (43-81)||(34012517-34012555)
chr7 (46-80)||(35569654-35569688)
chr7 (18-81)||(39871588-39871651)
chr7 (46-80)||(41444466-41444500)
chr7 (259-297)||(42067171-42067209)
chr7 (212-258)||(42311088-42311134)
chr7 (17-80)||(43081252-43081315)
chr7 (253-294)||(3860874-3860915)
chr7 (43-80)||(7703820-7703857)
chr7 (43-80)||(31803120-31803157)
chr7 (44-81)||(33381574-33381611)
chr7 (43-80)||(41003154-41003191)
chr7 (253-297)||(433803-433847)
chr7 (253-289)||(5546281-5546317)
chr7 (43-75)||(17317446-17317478)
chr7 (204-251)||(26583513-26583561)
chr7 (253-296)||(31235903-31235947)
chr7 (46-78)||(47534905-47534937)
[»] chr6 (39 HSPs)
chr6 (253-297)||(7876156-7876200)
chr6 (253-297)||(7881214-7881258)
chr6 (253-296)||(8496887-8496930)
chr6 (253-296)||(25064157-25064200)
chr6 (253-296)||(33109756-33109799)
chr6 (42-80)||(13011119-13011157)
chr6 (253-297)||(12652862-12652906)
chr6 (212-256)||(16418967-16419011)
chr6 (253-296)||(8196519-8196562)
chr6 (42-81)||(11161850-11161889)
chr6 (253-296)||(17237396-17237439)
chr6 (253-296)||(23947429-23947472)
chr6 (43-81)||(9341837-9341875)
chr6 (257-295)||(17334701-17334739)
chr6 (212-258)||(25064043-25064089)
chr6 (43-83)||(13901638-13901678)
chr6 (253-296)||(4468481-4468524)
chr6 (42-81)||(11200593-11200632)
chr6 (42-81)||(23604459-23604498)
chr6 (42-81)||(25197151-25197190)
chr6 (253-292)||(33740694-33740733)
chr6 (43-81)||(402621-402659)
chr6 (261-295)||(8028231-8028265)
chr6 (18-81)||(13321301-13321364)
chr6 (43-81)||(15498628-15498666)
chr6 (43-81)||(25045643-25045681)
chr6 (43-81)||(34915543-34915581)
chr6 (43-80)||(2090658-2090695)
chr6 (259-296)||(4088388-4088425)
chr6 (259-292)||(12165769-12165802)
chr6 (256-289)||(14801107-14801140)
chr6 (253-294)||(16419080-16419121)
chr6 (18-80)||(31091445-31091507)
chr6 (43-80)||(32614989-32615026)
chr6 (253-289)||(4984697-4984733)
chr6 (213-257)||(12652749-12652793)
chr6 (44-80)||(13648130-13648166)
chr6 (55-83)||(33012670-33012698)
chr6 (253-292)||(33543734-33543774)
[»] chr4 (81 HSPs)
chr4 (248-296)||(29965563-29965611)
chr4 (253-296)||(53616763-53616806)
chr4 (253-295)||(47416818-47416860)
chr4 (253-297)||(1531841-1531885)
chr4 (18-83)||(28501361-28501426)
chr4 (253-292)||(2115704-2115743)
chr4 (253-296)||(8009471-8009514)
chr4 (253-296)||(9283845-9283888)
chr4 (253-292)||(9528994-9529033)
chr4 (253-296)||(20569186-20569229)
chr4 (253-296)||(25273814-25273857)
chr4 (253-296)||(34024548-34024591)
chr4 (253-296)||(43154133-43154176)
chr4 (253-296)||(43444327-43444370)
chr4 (253-296)||(51317920-51317963)
chr4 (212-258)||(9283731-9283777)
chr4 (43-77)||(16545983-16546017)
chr4 (43-81)||(28298371-28298409)
chr4 (253-295)||(50766622-50766664)
chr4 (44-81)||(375423-375460)
chr4 (260-297)||(868105-868142)
chr4 (259-296)||(2624438-2624475)
chr4 (17-87)||(13498460-13498530)
chr4 (18-80)||(13620829-13620891)
chr4 (43-80)||(26866863-26866900)
chr4 (18-80)||(29520139-29520201)
chr4 (44-80)||(36901111-36901147)
chr4 (253-297)||(46991241-46991285)
chr4 (46-81)||(3085444-3085479)
chr4 (212-251)||(6972630-6972669)
chr4 (253-296)||(10389865-10389908)
chr4 (211-258)||(25273694-25273741)
chr4 (46-81)||(26889902-26889937)
chr4 (253-296)||(37188704-37188747)
chr4 (253-292)||(38706826-38706865)
chr4 (253-292)||(49072873-49072912)
chr4 (253-296)||(49680471-49680514)
chr4 (17-77)||(54623804-54623864)
chr4 (253-296)||(56194533-56194576)
chr4 (43-81)||(4415964-4416002)
chr4 (212-258)||(5333751-5333797)
chr4 (212-258)||(10389976-10390022)
chr4 (43-81)||(17610020-17610058)
chr4 (43-81)||(20455181-20455219)
chr4 (43-81)||(24754077-24754115)
chr4 (42-80)||(25124245-25124283)
chr4 (42-80)||(28495380-28495418)
chr4 (212-258)||(29965495-29965541)
chr4 (254-292)||(35261127-35261165)
chr4 (43-81)||(36391853-36391891)
chr4 (46-80)||(37776740-37776774)
chr4 (46-80)||(39114890-39114924)
chr4 (18-81)||(41191603-41191666)
chr4 (43-81)||(46949991-46950029)
chr4 (43-81)||(49793090-49793128)
chr4 (212-258)||(50766734-50766780)
chr4 (18-81)||(51335792-51335855)
chr4 (43-77)||(52850454-52850488)
chr4 (42-80)||(53564355-53564393)
chr4 (43-81)||(56432517-56432555)
chr4 (213-258)||(867978-868023)
chr4 (213-258)||(2624318-2624363)
chr4 (18-80)||(5743634-5743696)
chr4 (44-81)||(6462691-6462728)
chr4 (43-80)||(6753525-6753562)
chr4 (259-296)||(9645661-9645698)
chr4 (19-81)||(18872716-18872778)
chr4 (44-81)||(24073127-24073164)
chr4 (43-80)||(31937076-31937113)
chr4 (44-81)||(32899219-32899256)
chr4 (217-258)||(43444218-43444259)
chr4 (43-80)||(49373693-49373730)
chr4 (256-289)||(52978744-52978777)
chr4 (43-80)||(55014968-55015005)
chr4 (253-297)||(4643792-4643835)
chr4 (16-73)||(17678492-17678549)
chr4 (260-288)||(34118713-34118741)
chr4 (256-296)||(35351272-35351312)
chr4 (43-75)||(37352549-37352581)
chr4 (43-75)||(37357448-37357480)
chr4 (44-80)||(55563128-55563164)
[»] chr2 (66 HSPs)
chr2 (253-297)||(27477081-27477125)
chr2 (253-297)||(36233931-36233975)
chr2 (253-296)||(27249263-27249306)
chr2 (253-296)||(30420603-30420646)
chr2 (253-296)||(42949641-42949684)
chr2 (18-84)||(9701066-9701132)
chr2 (253-297)||(21570519-21570563)
chr2 (257-296)||(3270340-3270379)
chr2 (253-296)||(6173558-6173601)
chr2 (253-296)||(8971738-8971781)
chr2 (253-296)||(31581831-31581874)
chr2 (253-296)||(34598914-34598957)
chr2 (253-296)||(45128130-45128173)
chr2 (212-258)||(34598799-34598845)
chr2 (259-297)||(40660042-40660080)
chr2 (43-81)||(44573882-44573920)
chr2 (44-81)||(6027617-6027654)
chr2 (43-80)||(11852185-11852222)
chr2 (43-88)||(16805791-16805836)
chr2 (43-88)||(16845072-16845117)
chr2 (18-80)||(23788969-23789031)
chr2 (19-80)||(7116275-7116336)
chr2 (43-87)||(8295314-8295358)
chr2 (253-296)||(2808582-2808625)
chr2 (253-292)||(7015826-7015865)
chr2 (253-296)||(8805793-8805836)
chr2 (253-296)||(22421662-22421705)
chr2 (253-296)||(26025521-26025564)
chr2 (17-81)||(26322267-26322331)
chr2 (261-296)||(27949357-27949392)
chr2 (253-296)||(32680694-32680737)
chr2 (253-296)||(32913168-32913211)
chr2 (17-80)||(1143232-1143295)
chr2 (43-81)||(1859546-1859584)
chr2 (42-80)||(2060316-2060354)
chr2 (43-81)||(8841657-8841695)
chr2 (262-296)||(9986457-9986491)
chr2 (43-81)||(12360456-12360494)
chr2 (18-81)||(12890183-12890246)
chr2 (43-81)||(15228149-15228187)
chr2 (43-81)||(22897390-22897428)
chr2 (212-258)||(27249374-27249420)
chr2 (42-80)||(28566151-28566189)
chr2 (43-77)||(30466108-30466142)
chr2 (212-258)||(31581925-31581971)
chr2 (18-81)||(31751068-31751131)
chr2 (18-81)||(40607701-40607764)
chr2 (253-295)||(40626140-40626182)
chr2 (17-80)||(44436795-44436858)
chr2 (18-80)||(3095299-3095361)
chr2 (256-289)||(3308848-3308881)
chr2 (253-294)||(3725107-3725148)
chr2 (43-80)||(8912874-8912911)
chr2 (47-80)||(19034415-19034448)
chr2 (43-80)||(19353191-19353228)
chr2 (18-80)||(27560206-27560268)
chr2 (14-80)||(30830313-30830379)
chr2 (18-80)||(32120944-32121006)
chr2 (19-89)||(34944388-34944458)
chr2 (43-76)||(41968202-41968235)
chr2 (43-80)||(45628879-45628916)
chr2 (48-80)||(1142997-1143029)
chr2 (253-289)||(4192765-4192801)
chr2 (255-295)||(4228060-4228100)
chr2 (253-293)||(18694974-18695014)
chr2 (214-258)||(20047304-20047348)
[»] chr5 (47 HSPs)
chr5 (253-296)||(2057950-2057993)
chr5 (253-296)||(10649378-10649421)
chr5 (253-296)||(26578174-26578217)
chr5 (253-296)||(30371649-30371692)
chr5 (17-81)||(3028012-3028076)
chr5 (253-296)||(20257806-20257849)
chr5 (253-296)||(27266972-27267015)
chr5 (253-296)||(30298133-30298176)
chr5 (253-296)||(34881634-34881677)
chr5 (43-82)||(40643092-40643131)
chr5 (43-81)||(22657767-22657805)
chr5 (259-297)||(35475447-35475485)
chr5 (250-295)||(1696979-1697024)
chr5 (259-296)||(43261929-43261966)
chr5 (43-75)||(42561349-42561381)
chr5 (253-296)||(781314-781357)
chr5 (16-80)||(5283049-5283112)
chr5 (253-296)||(7241707-7241750)
chr5 (253-296)||(7246883-7246926)
chr5 (253-296)||(18677578-18677621)
chr5 (253-292)||(21060397-21060436)
chr5 (48-83)||(21750196-21750231)
chr5 (42-81)||(23260137-23260176)
chr5 (253-295)||(7150448-7150490)
chr5 (18-81)||(7940451-7940514)
chr5 (43-81)||(8949811-8949849)
chr5 (47-81)||(14649187-14649221)
chr5 (259-297)||(28235516-28235554)
chr5 (46-80)||(34889282-34889316)
chr5 (253-295)||(36344602-36344644)
chr5 (43-81)||(41384172-41384210)
chr5 (212-258)||(42579688-42579734)
chr5 (19-81)||(3160503-3160565)
chr5 (46-83)||(7734830-7734867)
chr5 (260-297)||(10148730-10148767)
chr5 (43-80)||(23286474-23286511)
chr5 (259-296)||(27751857-27751894)
chr5 (213-258)||(41184667-41184712)
chr5 (259-292)||(42579811-42579844)
chr5 (43-80)||(43060411-43060448)
chr5 (42-86)||(16926446-16926490)
chr5 (43-87)||(18251007-18251051)
chr5 (212-256)||(19281169-19281213)
chr5 (44-80)||(19571940-19571976)
chr5 (253-297)||(27576460-27576504)
chr5 (48-80)||(40738410-40738442)
chr5 (47-99)||(41383893-41383945)
[»] chr3 (70 HSPs)
chr3 (253-296)||(32607387-32607430)
chr3 (253-296)||(35499313-35499356)
chr3 (253-295)||(14464427-14464469)
chr3 (14-80)||(53164163-53164229)
chr3 (253-296)||(4172486-4172529)
chr3 (253-296)||(25631639-25631682)
chr3 (17-81)||(27687985-27688049)
chr3 (253-296)||(38440689-38440732)
chr3 (253-296)||(44907511-44907554)
chr3 (8-80)||(48887911-48887983)
chr3 (254-296)||(12116014-12116056)
chr3 (42-80)||(27646305-27646343)
chr3 (43-81)||(28673294-28673332)
chr3 (43-80)||(6784463-6784500)
chr3 (43-80)||(21458982-21459019)
chr3 (46-83)||(24813599-24813636)
chr3 (44-81)||(29454787-29454824)
chr3 (43-80)||(33212397-33212434)
chr3 (18-80)||(46878414-46878476)
chr3 (43-80)||(50517522-50517559)
chr3 (253-297)||(38855148-38855192)
chr3 (46-86)||(45513370-45513410)
chr3 (253-293)||(46934562-46934602)
chr3 (253-296)||(3850567-3850610)
chr3 (253-292)||(17237722-17237761)
chr3 (17-81)||(19897810-19897874)
chr3 (253-296)||(29503382-29503425)
chr3 (259-294)||(31794005-31794040)
chr3 (253-292)||(36906041-36906080)
chr3 (253-296)||(39917508-39917551)
chr3 (46-81)||(41750926-41750961)
chr3 (19-87)||(43158712-43158780)
chr3 (43-82)||(46845492-46845531)
chr3 (253-296)||(50611529-50611572)
chr3 (253-295)||(2342411-2342453)
chr3 (43-81)||(4759351-4759389)
chr3 (43-81)||(7051720-7051758)
chr3 (18-81)||(7181349-7181412)
chr3 (18-81)||(10015764-10015827)
chr3 (42-80)||(16776886-16776924)
chr3 (43-81)||(24087335-24087373)
chr3 (42-80)||(29719709-29719747)
chr3 (18-81)||(30819877-30819940)
chr3 (212-258)||(32607273-32607319)
chr3 (43-81)||(32963105-32963143)
chr3 (46-80)||(33360885-33360919)
chr3 (43-81)||(33868447-33868485)
chr3 (212-258)||(38855259-38855305)
chr3 (43-81)||(41392880-41392918)
chr3 (18-81)||(48909871-48909934)
chr3 (17-80)||(49543677-49543740)
chr3 (46-80)||(54866536-54866570)
chr3 (44-81)||(2993258-2993295)
chr3 (43-80)||(8321925-8321962)
chr3 (43-76)||(8546908-8546941)
chr3 (18-80)||(9582243-9582305)
chr3 (18-80)||(14428610-14428672)
chr3 (18-80)||(15996748-15996810)
chr3 (43-88)||(22103929-22103974)
chr3 (18-80)||(31186758-31186820)
chr3 (42-79)||(31397767-31397804)
chr3 (46-87)||(41824101-41824141)
chr3 (43-80)||(45324087-45324124)
chr3 (213-258)||(46934449-46934494)
chr3 (18-80)||(47008477-47008539)
chr3 (16-74)||(51489373-51489431)
chr3 (43-87)||(10656684-10656728)
chr3 (19-80)||(15095198-15095259)
chr3 (42-74)||(22527620-22527652)
chr3 (48-80)||(42044257-42044289)
[»] scaffold0014 (1 HSPs)
scaffold0014 (253-297)||(201482-201526)
[»] scaffold0250 (1 HSPs)
scaffold0250 (43-81)||(9426-9464)
[»] scaffold0311 (1 HSPs)
scaffold0311 (259-296)||(8648-8685)
[»] scaffold0003 (2 HSPs)
scaffold0003 (259-291)||(361913-361945)
scaffold0003 (218-258)||(362017-362057)
[»] scaffold0146 (1 HSPs)
scaffold0146 (253-292)||(16438-16477)
[»] scaffold0020 (1 HSPs)
scaffold0020 (18-81)||(164213-164276)
[»] scaffold0674 (1 HSPs)
scaffold0674 (43-80)||(5151-5188)
[»] scaffold0549 (1 HSPs)
scaffold0549 (43-80)||(10182-10219)
[»] scaffold0457 (1 HSPs)
scaffold0457 (43-80)||(4663-4700)
[»] scaffold0308 (1 HSPs)
scaffold0308 (43-80)||(14348-14385)
[»] scaffold0240 (1 HSPs)
scaffold0240 (43-80)||(18497-18534)
[»] scaffold0236 (1 HSPs)
scaffold0236 (18-80)||(17464-17526)
[»] scaffold0161 (1 HSPs)
scaffold0161 (43-80)||(3438-3475)
[»] scaffold0107 (1 HSPs)
scaffold0107 (43-80)||(48654-48691)
[»] scaffold0039 (1 HSPs)
scaffold0039 (43-80)||(104061-104098)
[»] scaffold0019 (1 HSPs)
scaffold0019 (43-80)||(117846-117883)


Alignment Details
Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 44 - 204
Target Start/End: Original strand, 13568906 - 13569066
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtatcaatttatagaaaatagtctatctaatataaatcgcacaacaccctaatcatcaaagacaat 143  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13568906 tctcaaaagggtcttataattaaggacggaggtagtatcaatttatagaaaatagtctatctaatataaatcgcacaacaccctaatcatcaaagacaat 13569005  T
Q  144 taagataattaaagaataaaatcatgtatatgagaaagggttgacaatactttcaattaat 204  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13569006 taagataactaaagaataaaaacatgtatatgagaaagggttgacaatactttcaattaat 13569066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 2655798 - 2655842
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  2655798 tctctttatttcaatctaaataagtgattttcacatagatctaga 2655842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 14907079 - 14907036
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  14907079 tctctttatttcaatctaaataagtgattttcacatagatctag 14907036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 9619513 - 9619469
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  9619513 tctctttatttcaatctaaataagtgattttcacatagatttaga 9619469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 32724644 - 32724600
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  32724644 tctctctatttcaatctaaataagtgattttcacatagatctaga 32724600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 2786155 - 2786116
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  2786155 tttctcaaaaggatcttataattgaggacggaggtagtat 2786116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 11725611 - 11725654
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  11725611 tctctttatttcaatctaaataagtgtttttcacatagatctag 11725654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 44100087 - 44100045
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  44100087 tctctatatttcaatctaaataagttattttcacatagatcta 44100045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 44100200 - 44100154
Alignment:
Q  213 ctctccaacaagccggccttatttttctctctctaggttatctcttt 259  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||    
T  44100200 ctctccaacaagccggccctagttttctctctctaggttttctcttt 44100154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 4808895 - 4808936
Alignment:
Q  255 tctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  4808895 tctttatttcaatgtaaataagtgattttcacatagatctag 4808936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 9498755 - 9498718
Alignment:
Q  255 tctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9498755 tctttatttcaatctaaataagtgattttcacatagat 9498718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 11196825 - 11196862
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  11196825 tatttcaatctaaataagtgattttcacatagatctag 11196862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 19176198 - 19176136
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       || ||||||||| ||||||||||||||||||||||||||    
T  19176198 gtcttataaaaagggacaaaaaaattactcaaaagggtcttataattaaggacggaggtagta 19176136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 11464099 - 11464143
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||    
T  11464099 tctctttatttcaatttgaataagtgattttcacatagatctaga 11464143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 12802649 - 12802605
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtatcaatt 86  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||    
T  12802649 tttctcaaaagggtcttataattagggacggaggtagtataaatt 12802605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 15597314 - 15597278
Alignment:
Q  260 atttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15597314 atttcaatctaaataagtgattttcacatagatctag 15597278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 43890280 - 43890236
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    |||||||| |||||||||||||||| ||||| |||||||||||||    
T  43890280 tctctttaattcaatctaaataagtgattttgacatagatctaga 43890236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 44748463 - 44748503
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatca 83  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  44748463 ttctcaaaagaatcttataattagggacggaggtagtatca 44748503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 14913002 - 14913041
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  14913002 tctctttatttcaacctaaataagtaattttcatatagat 14913041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 35580387 - 35580430
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||    
T  35580387 tctctctatttcaatttaaataagtgattttcacatagatctag 35580430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 44888752 - 44888680
Alignment:
Q  8 tagcatagaagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||| || ||||||||||||||||||       ||| |||||||| ||||||||||| ||||||||||||||    
T  44888752 tagcaaaggagtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagta 44888680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 2152240 - 2152278
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  2152240 ttctcaaaagggtcttataattagggacggaggtagtat 2152278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 5784148 - 5784186
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  5784148 ttctcaaaaagatcttataattagggacggaggtagtat 5784186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 17069843 - 17069881
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  17069843 tttctcaaaagggtcttataattagggacggaggtagta 17069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 17578430 - 17578392
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  17578430 tttctcaaaagggtcttataattagggacggaggtagta 17578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 293
Target Start/End: Original strand, 19876147 - 19876181
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatc 293  Q
    ||||||||||||||||||| |||||||||||||||    
T  19876147 tatttcaatctaaataagtgattttcacatagatc 19876181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 23487126 - 23487063
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  23487126 gtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 23487063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 29321269 - 29321332
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||| |||||||||||    
T  29321269 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggatggaggtagtat 29321332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 32675732 - 32675795
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||| |||||    
T  32675732 gtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggagggagtat 32675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 296
Target Start/End: Original strand, 33298794 - 33298828
Alignment:
Q  262 ttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||||||| ||||||||||||||||||    
T  33298794 ttcaatctaaataagtgattttcacatagatctag 33298828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 38781141 - 38781179
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  38781141 ttctcaaaagggtcttataattatggacggaggtagtat 38781179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 40529344 - 40529306
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  40529344 ttctcaaaaggatcttataattagggacggagggagtat 40529306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 41898499 - 41898533
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||| ||||||||||||||    
T  41898499 tcaaaaggatcttataattagggacggaggtagta 41898533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 5162341 - 5162304
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  5162341 ttctcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 8797297 - 8797334
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  8797297 ttctcaaaagggtcttataattaaggacggaagtagta 8797334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 14699489 - 14699452
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  14699489 ttctcaaaaggatcttataattagggacggaggaagta 14699452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 17949176 - 17949217
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatct 294  Q
    ||||| ||||||||||||||||||  ||||||||||||||||    
T  17949176 tctctctatttcaatctaaataagcgattttcacatagatct 17949217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 18641380 - 18641417
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  18641380 ttctcaaaagggtcttataattagggacggaggtagta 18641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 11293716 - 11293647
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtatcaatt 86  Q
    ||||||||||||||||||       ||||||||||| ||||||||||||  ||||||| || ||||||||    
T  11293716 agtcttataaaaagggacaaatttttttctcaaaagaatcttataattagagacggagataatatcaatt 11293647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 29777044 - 29777088
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctc 256  Q
    ||||||||||||| ||||| || ||||||||||||||||| ||||    
T  29777044 cctctccaacaagtcggccctaattttctctctctaggttttctc 29777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 29806222 - 29806266
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatcaattt 87  Q
    ||||||||||| | ||||||||| |||||||||||||||| ||||    
T  29806222 ttctcaaaagggttttataattagggacggaggtagtatctattt 29806266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 44502656 - 44502620
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  44502656 tctcaaaaggatcttataattagggacggagggagta 44502620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 44747313 - 44747345
Alignment:
Q  48 aaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||| |||||||||||||||||||||||||    
T  44747313 aaaaggaccttataattaaggacggaggtagta 44747345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 50272295 - 50272253
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  50272295 tctctttatttcaatctaaataagtaattttcacatagatcta 50272253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 20266228 - 20266271
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  20266228 tctctttatttcaatctaaataagtgattttcacatagatctag 20266271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 25728114 - 25728071
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  25728114 tctctttatttcaatctaaataagtgattttcacatagatctag 25728071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 35584776 - 35584733
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  35584776 tctctttatttcaatctaaataagtgattttcacatagatctag 35584733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 5701183 - 5701226
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  5701183 tctctttatttcaatttaaataagtgattttcacatagatctag 5701226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 7997713 - 7997756
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  7997713 tctctttatttcaatataaataagtgattttcacatagatctag 7997756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 14545446 - 14545489
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  14545446 tctctatatttcaatctaaataagtgattttcacatagatctag 14545489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 18569465 - 18569422
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  18569465 tctctctatttcaatctaaataagtgattttcacatagatctag 18569422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 19716052 - 19716013
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  19716052 tctctttatttcaatctaaataagtgattttcacatagat 19716013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 25271234 - 25271195
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtatca 83  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  25271234 tctcaaaaggatcttataattaaggacggatgtagtatca 25271195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 28035065 - 28035108
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  28035065 tctctctatttcaatctaaataagtgattttcacatagatctag 28035108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 34519059 - 34519102
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  34519059 tctctctatttcaatctaaataagtgattttcacatagatctag 34519102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 50148298 - 50148341
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  50148298 tctctttattttaatctaaataagtgattttcacatagatctag 50148341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 22567103 - 22567065
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22567103 ttctcaaaaggatcttataattagggacggaggtagtat 22567065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 30879001 - 30879043
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  30879001 tctctttattttaatctaaataagtgattttcacatagatcta 30879043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 31836678 - 31836724
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||    
T  31836678 cctctccaacaagccggccctagttttctctctctaggttttctctt 31836724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 38261403 - 38261340
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||        ||||||||||| ||||||||||||||||||||||||||    
T  38261403 agtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaaggacggaggtagta 38261340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 40646500 - 40646546
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||    
T  40646500 cctctccaacaagccggccctagttttctctctctaggttttctctt 40646546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 23893672 - 23893734
Alignment:
Q  19 tcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||       ||||||||||| || |||||||||||||||||||||||||    
T  23893672 tcttataaaaagggacaattttttttctcaaaagaattttataattaaggacggaggtagtat 23893734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 3871236 - 3871272
Alignment:
Q  215 ctccaacaagccggccttatttttctctctctaggtt 251  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3871236 ctccaacaagccggccttagttttctctctctaggtt 3871272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 15302719 - 15302784
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtatca 83  Q
    |||||||||||||||||       ||| |||||||||||||||||||| ||| |||||||||||||    
T  15302719 gtcttataaaaagggacaaattattttttcaaaaggatcttataattagggatggaggtagtatca 15302784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 27872671 - 27872707
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||||||||| |||||||||||||||||    
T  27872671 tatttcaatctaaataagtgattttcacatagatcta 27872707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 44637350 - 44637390
Alignment:
Q  255 tctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  44637350 tctttatttcaatctaaataagtgattttcacgtagatcta 44637390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 295
Target Start/End: Original strand, 3871342 - 3871377
Alignment:
Q  260 atttcaatctaaataagtaattttcacatagatcta 295  Q
    |||||||||||||||||| |||||||||||||||||    
T  3871342 atttcaatctaaataagtgattttcacatagatcta 3871377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 9919237 - 9919284
Alignment:
Q  211 tcctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||||||| || |||||||||||||| || ||||||    
T  9919237 tcctctccaacaagccggccctaattttctctctctagattttctctt 9919284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 11453862 - 11453905
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| |||||||||||||||||||  |||||||||||||||||    
T  11453862 tctctctatttcaatctaaataagtggttttcacatagatctag 11453905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 23530576 - 23530541
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||| |||||||||||||||||||||||||||    
T  23530576 tcaaaagggtcttataattaaggacggaggtagtat 23530541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 25406439 - 25406396
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  25406439 tctctctatttcaatctaaataagtgactttcacatagatctag 25406396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 28052223 - 28052188
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||| ||||||||||||||||||||||||||||    
T  28052223 tcaaaagaatcttataattaaggacggaggtagtat 28052188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 30818500 - 30818457
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||    
T  30818500 tctctctatttcaatctaaataagtgattttcacataaatctag 30818457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 77
Target Start/End: Original strand, 35160315 - 35160346
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggta 77  Q
    ||||||||||||||||||||||||||||||||    
T  35160315 tcaaaaggatcttataattaaggacggaggta 35160346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 37850438 - 37850477
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  37850438 tttctcaaaaggatcttataattagggacagaggtagtat 37850477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 40646618 - 40646657
Alignment:
Q  257 tttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  40646618 tttatttcaatctaaataagtgattttcacgtagatctag 40646657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 42276160 - 42276199
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  42276160 tttctcaaaagggtcttataattagggacggaggtagtat 42276199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 50166368 - 50166321
Alignment:
Q  211 tcctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||| || || ||||||||||||||||| ||||||    
T  50166368 tcctctccaacaagccgcccataattttctctctctaggttttctctt 50166321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 51868800 - 51868757
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  51868800 tctctctatttcaatctaaataagtgactttcacatagatctag 51868757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 51871790 - 51871833
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  51871790 tctctctatttcaatctaaataagtgactttcacatagatctag 51871833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 1427236 - 1427198
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  1427236 ttctcaaaagggtcttatatttaaggacggaggtagtat 1427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 3934640 - 3934606
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||| ||||||||||||||    
T  3934640 tcaaaaggatcttataattagggacggaggtagta 3934606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 7342534 - 7342580
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||| ||||||||| || ||||||||||||||||| ||||||    
T  7342534 cctctccaataagccggccctaattttctctctctaggttttctctt 7342580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 7763749 - 7763787
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  7763749 ttctcaaaagggtcttataattagggacggaggtagtat 7763787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 9413300 - 9413363
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  9413300 gtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 9413363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 9919315 - 9919357
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||    
T  9919315 tctctctatttcaatctaaataagtgatttttacatagatcta 9919357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 296
Target Start/End: Original strand, 19723268 - 19723302
Alignment:
Q  262 ttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||||||| ||||||||||||||||||    
T  19723268 ttcaatctaaataagtgattttcacatagatctag 19723302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 25509246 - 25509208
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  25509246 ttctcaaaagggtcttataattagggacggaggtagtat 25509208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 27037306 - 27037268
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  27037306 ttctcaaaagggtcttataattagggacggaggtagtat 27037268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 38520688 - 38520646
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||| |||||| |||||||||||| |||||||||||||||||    
T  38520688 tctctctatttcgatctaaataagtgattttcacatagatcta 38520646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 39927703 - 39927665
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  39927703 tatttcaatctaaataaataattttcagatagatctaga 39927665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 45426217 - 45426175
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||    
T  45426217 tctctctatttaaatctaaataagtgattttcacatagatcta 45426175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 50246929 - 50246967
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  50246929 ttctcaaaaggatcttataattacggacggagggagtat 50246967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 51871677 - 51871723
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||| ||||| || ||||||||||||||||| ||||||    
T  51871677 cctctccaacaagtcggccctaattttctctctctaggttttctctt 51871723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 3549094 - 3549032
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       ||| ||||||||||||||||||||  |||||||||||||    
T  3549094 gtcttataaaaagggacaatttattttttcaaaaggatcttataattagagacggaggtagta 3549032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 8472111 - 8472049
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||| ||||||    
T  8472111 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggaagtagta 8472049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 9172420 - 9172457
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  9172420 tatttcaatctaaataagtgactttcacatagatctag 9172457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 9180402 - 9180439
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  9180402 tatttcaatctaaataagtgactttcacatagatctag 9180439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 30290327 - 30290265
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||| ||||    
T  30290327 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 30290265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 43456621 - 43456658
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  43456621 ttctcaaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 4280102 - 4280163
Alignment:
Q  19 tcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||       ||| |||||||| ||||||||||| ||||||||||||||    
T  4280102 tcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagta 4280163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 7312375 - 7312331
Alignment:
Q  207 tctctcctctccaacaagccggccttatttttctctctctaggtt 251  Q
    ||||||||||||||||| |||| |||| |||| ||||||||||||    
T  7312375 tctctcctctccaacaaaccggtcttaattttttctctctaggtt 7312331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 27037533 - 27037573
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtatcaatt 86  Q
    |||||||| ||||||||||| |||||||||||||| |||||    
T  27037533 tcaaaagggtcttataattagggacggaggtagtaacaatt 27037573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 33337066 - 33337098
Alignment:
Q  49 aaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||| ||||||||||||||||||||||||    
T  33337066 aaaggatcctataattaaggacggaggtagtat 33337098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 52431174 - 52431218
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatcaattt 87  Q
    ||||||||||| ||||||||||| ||||||||| ||||| |||||    
T  52431174 ttctcaaaagggtcttataattagggacggagggagtataaattt 52431218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 46821936 - 46821980
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  46821936 tctctttatttcaatctaaataagtgattttcacatagatctaga 46821980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 2843382 - 2843339
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  2843382 tctctttatttcaatctaaataagtgattttcacatagatctag 2843339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 21266314 - 21266357
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  21266314 tctctttatttcaatctaaataagtgattttcacatagatctag 21266357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 1448984 - 1448940
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  1448984 tctctctatttcaatctaaataagtgattttcacatagatctaga 1448940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 32684607 - 32684650
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  32684607 tctctctatttcaatctaaataagtgattttcacatagatctag 32684650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 35667386 - 35667343
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  35667386 tctctctatttcaatctaaataagtgattttcacatagatctag 35667343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 46338975 - 46339018
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  46338975 tctctttatttcaatgtaaataagtgattttcacatagatctag 46339018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 19292877 - 19292839
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19292877 tttctcaaaaggatcttataattagggacggaggtagta 19292839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 19845668 - 19845706
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19845668 tttctcaaaaggatcttataattagggacggaggtagta 19845706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 46821822 - 46821868
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||    
T  46821822 cctctccaacaagccggccctagttttctctctctaggttttctctt 46821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 20116511 - 20116548
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20116511 tatttcaatctaaataagtgattttcacatagatctag 20116548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 20951002 - 20951039
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  20951002 ttctcaaaaagatcttataattaaggacggaggtagta 20951039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 21119594 - 21119557
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21119594 ttctcaaaaggatcttataattagggacggaggtagta 21119557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 22928138 - 22928093
Alignment:
Q  213 ctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||    
T  22928138 ctctccaacaagccggccctaattttctctctctaggttttctctt 22928093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 1485411 - 1485367
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  1485411 tctctctatttcaatctaaataagtgactttcacatagatctaga 1485367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 7400200 - 7400128
Alignment:
Q  8 tagcatagaagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||| || ||||||||||||||||||       |||| ||||||||||||||||||| |||||||||||||||    
T  7400200 tagcaaaggagtcttataaaaagggacaattttttttc-caaaaggatcttataattagggacggaggtagtat 7400128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 23802184 - 23802223
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtatcaatt 86  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  23802184 tcaaaaggatcttataatta-ggacggaggtagtatcaatt 23802223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 48207830 - 48207866
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||||||||| |||||||||||||||||    
T  48207830 tatttcaatctaaataagtgattttcacatagatcta 48207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 251
Target Start/End: Complemental strand, 1449098 - 1449059
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggtt 251  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  1449098 cctctccaacaagccggccctagttttctctctctaggtt 1449059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 3024656 - 3024592
Alignment:
Q  8 tagcatagaagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacgg 72  Q
    ||||| |||||||||||||||||||||       ||| |||||||| ||||||||||||||||||    
T  3024656 tagcaaagaagtcttataaaaagggacaaatttttttttcaaaagggtcttataattaaggacgg 3024592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 22991747 - 22991782
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||||| |||||||||||||||    
T  22991747 tcaaaaggatcttataattagggacggaggtagtat 22991782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 23425526 - 23425483
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||    
T  23425526 tctctatatttcaatctaaataagtgatttttacatagatctag 23425483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 26492287 - 26492330
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||    
T  26492287 tctctctatttcaatttaaataagtgattttcacatagatctag 26492330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 27529300 - 27529229
Alignment:
Q  8 tagcatagaagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||| ||| |||||||||||||||||       ||| |||||||||||||||||||| ||||||||||||||    
T  27529300 tagcaaagaggtcttataaaaagggacaatttttttt-tcaaaaggatcttataattagggacggaggtagta 27529229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 35496330 - 35496287
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  35496330 tctctctatttcaatctaattaagtgattttcacatagatctag 35496287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 42311202 - 42311245
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| || |||||||||||||||    
T  42311202 tctctctatttcaatctaaataagtgatattcacatagatctag 42311245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 44719199 - 44719127
Alignment:
Q  8 tagcatagaagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||| ||| |||||||||||||||||        ||||||||| | ||||||||||||||||||||||||||    
T  44719199 tagcaaagacgtcttataaaaagggacacaaaatattctcaaaatggtcttataattaaggacggaggtagta 44719127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 2290016 - 2290054
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  2290016 ttctcaaaagggtcttataattagggacggaggtagtat 2290054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 12631815 - 12631853
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  12631815 tttctcaaaatggtcttataattaaggacggaggtagta 12631853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 19619072 - 19619034
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  19619072 ttctcaaaaagatcttataattaaggacggaggttgtat 19619034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 23085330 - 23085376
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||| || || ||||||||||||||||| ||||||    
T  23085330 cctctccaacaagccgaccctaattttctctctctaggttttctctt 23085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 25950868 - 25950830
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  25950868 ttctcaaaaaggtcttataattaaggacggaggtagtat 25950830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 29177252 - 29177290
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  29177252 ttctcaaaaggatcttataattagggacggagggagtat 29177290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 34012517 - 34012555
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  34012517 ttctcaaaagggtcttataattagggacggaggtagtat 34012555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 35569654 - 35569688
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||| ||||||||||||||||||||||||||    
T  35569654 tcaaaagggtcttataattaaggacggaggtagta 35569688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 39871588 - 39871651
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||| |||||    
T  39871588 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 39871651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 41444466 - 41444500
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||| ||||||||||||||    
T  41444466 tcaaaaggatcttataattagggacggaggtagta 41444500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 42067209 - 42067171
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  42067209 tatttcaatctaaataagtgattttcacatagatataga 42067171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 42311088 - 42311134
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||| || || ||||||||||||||||| ||||||    
T  42311088 cctctccaacaagccgaccctaattttctctctctaggttttctctt 42311134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 43081315 - 43081252
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||        ||||||||||||||||||||||| ||||| ||||||||    
T  43081315 agtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacgaaggtagta 43081252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 3860874 - 3860915
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatct 294  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||    
T  3860874 tctctttgtttcaatataaataagtgattttcacatagatct 3860915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 7703820 - 7703857
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  7703820 ttctcaaaagaatcttataattaaggacggagggagta 7703857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 31803120 - 31803157
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  31803120 ttctcaaaaagatcttataattagggacggaggtagta 31803157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 33381574 - 33381611
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  33381574 tctcaaaagggtcttataattagggacggaggtagtat 33381611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 41003154 - 41003191
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  41003154 ttctcaaaagggtcttataattaaggacggagggagta 41003191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 433847 - 433803
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||| | | |||||||||||||||||    
T  433847 tctctctatttcaatctaaataaatgactttcacatagatctaga 433803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 5546281 - 5546317
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacata 289  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  5546281 tctctctatttcaatctaaataagtgattttcacata 5546317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 17317478 - 17317446
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggagg 75  Q
    ||||||||||||||||||||||| |||||||||    
T  17317478 ttctcaaaaggatcttataattagggacggagg 17317446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 26583513 - 26583561
Alignment:
Q  204 taatctctcc-tctccaacaagccggccttatttttctctctctaggtt 251  Q
    |||||||||| ||||||||||||||||| || |||||||| ||||||||    
T  26583513 taatctctccctctccaacaagccggccctagttttctctttctaggtt 26583561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 31235947 - 31235903
Alignment:
Q  253 tctctttatttcaatctaaataagt-aattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  31235947 tctctctatttcaatctaaataagtgatttttcacatagatctag 31235903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 47534905 - 47534937
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtag 78  Q
    ||||||||||||||||||||| |||||||||||    
T  47534905 tcaaaaggatcttataattaatgacggaggtag 47534937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 7876200 - 7876156
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  7876200 tctctttatttcaatctaaataagtgattttcacatagatctaga 7876156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 7881258 - 7881214
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  7881258 tctctttatttcaatctaaataagtgattttcacatagatctaga 7881214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 8496887 - 8496930
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  8496887 tctctttatttcaatctaaataagtgattttcacatagatctag 8496930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 25064157 - 25064200
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  25064157 tctctttatttcaatctaaataagtgattttcacatagatctag 25064200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 33109756 - 33109799
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  33109756 tctctttatttcaatctaaataagtgattttcacatagatctag 33109799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 13011119 - 13011157
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13011119 tttctcaaaaggatcttataattaaggacggaggtagta 13011157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 12652862 - 12652906
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  12652862 tctctctatttcaatctaaataagtgattttcacatagatctaga 12652906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 16418967 - 16419011
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctc 256  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  16418967 cctctccaacaagccggccttaattttctctctctaggttttctc 16419011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 8196562 - 8196519
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  8196562 tctctctatttcaatctaaataagtgattttcacatagatctag 8196519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 11161889 - 11161850
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  11161889 tttctcaaaaggctcttataattaaggacggaggtagtat 11161850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 17237439 - 17237396
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  17237439 tctctatatttcaatctaaataagttattttcacatagatctag 17237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 23947472 - 23947429
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  23947472 tctctctatttcaatctaaataagtgattttcacatagatctag 23947429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 9341875 - 9341837
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9341875 ttctcaaaaggatcttataattagggacggaggtagtat 9341837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 17334701 - 17334739
Alignment:
Q  257 tttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  17334701 tttatttcaatctaaataagtgattttcacatagatcta 17334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 25064043 - 25064089
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||    
T  25064043 cctctccaacaagccggccctagttttctctctctaggttttctctt 25064089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 13901678 - 13901638
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatca 83  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  13901678 ttctcaaaagggtcttataattagggacggaggtagtatca 13901638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 4468481 - 4468524
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||    
T  4468481 tctctctatttcaatctaaataagtgattttcatatagatctag 4468524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 11200632 - 11200593
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  11200632 tttctcaaaaggctcttataattagggacggaggtagtat 11200593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 23604498 - 23604459
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  23604498 tttctcaaaagggtcttataattagggacggaggtagtat 23604459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 25197190 - 25197151
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  25197190 tttctcaaaaggatcttataattagggacggagggagtat 25197151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 33740733 - 33740694
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  33740733 tctctctatttcaatctaaataagtgattttcacatagat 33740694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 402621 - 402659
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  402621 ttctcaaaagggtcttataattagggacggaggtagtat 402659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 8028265 - 8028231
Alignment:
Q  261 tttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||||||| |||||||||||||||||    
T  8028265 tttcaatctaaataagtgattttcacatagatcta 8028231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 13321301 - 13321364
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  13321301 gtcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagtat 13321364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 15498666 - 15498628
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  15498666 ttctcaaaagggtcttataattagggacggaggtagtat 15498628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 25045643 - 25045681
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  25045643 ttctcaaaagggtcttataattagggacggaggtagtat 25045681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 34915543 - 34915581
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  34915543 ttctcaaaagggtcttataattagggacggaggtagtat 34915581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 2090695 - 2090658
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  2090695 ttctcaaaagggtcttataattagggacggaggtagta 2090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 4088388 - 4088425
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  4088388 tattacaatctaaataagtgattttcacatagatctag 4088425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 292
Target Start/End: Original strand, 12165769 - 12165802
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||||||||||||| ||||||||||||||    
T  12165769 tatttcaatctaaataagtgattttcacatagat 12165802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 14801107 - 14801140
Alignment:
Q  256 ctttatttcaatctaaataagtaattttcacata 289  Q
    |||| |||||||||||||||||||||||||||||    
T  14801107 ctttctttcaatctaaataagtaattttcacata 14801140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 16419080 - 16419121
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatct 294  Q
    ||||| ||||||||||||||||||| | ||||||||||||||    
T  16419080 tctctctatttcaatctaaataagtgactttcacatagatct 16419121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 31091507 - 31091445
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| ||||||||||||||    
T  31091507 gtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagta 31091445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 32615026 - 32614989
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  32615026 ttctcaaaaggttcttataattagggacggaggtagta 32614989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 4984733 - 4984697
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacata 289  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  4984733 tctctctatttcaatctaaataagtgattttcacata 4984697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 12652749 - 12652793
Alignment:
Q  213 ctctccaacaagccggccttatttttctctctctaggttatctct 257  Q
    |||||||||||| ||||| || ||||||||||||||||| |||||    
T  12652749 ctctccaacaagtcggccctagttttctctctctaggttttctct 12652793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 13648130 - 13648166
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  13648130 tctcaaaagggtcttataattaaggacggagggagta 13648166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 83
Target Start/End: Original strand, 33012670 - 33012698
Alignment:
Q  55 tcttataattaaggacggaggtagtatca 83  Q
    |||||||||||||||||||||||||||||    
T  33012670 tcttataattaaggacggaggtagtatca 33012698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 33543774 - 33543734
Alignment:
Q  253 tctctttatttcaatctaaataagtaa-ttttcacatagat 292  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  33543774 tctctatatttcaatctaaataagtaatttttcacatagat 33543734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 29965563 - 29965611
Alignment:
Q  248 ggttatctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  29965563 ggttttctctttatttcaatctaaataagtgattttcacatagatctag 29965611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 53616806 - 53616763
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  53616806 tctctttatttcaatctaaataagtgattttcacatagatctag 53616763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 47416818 - 47416860
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  47416818 tctctttatttcaatctaaataagtgattttcacatagatcta 47416860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 1531841 - 1531885
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  1531841 tctctctatttcaatctaaataagtgattttcacatagatctaga 1531885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 28501361 - 28501426
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtatca 83  Q
    |||||||||||||||||       |||||||||||| ||||||||||| |||||||||||||||||    
T  28501361 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggaggtagtatca 28501426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 2115743 - 2115704
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  2115743 tctctttatttcaatctaaataagtgattttcacatagat 2115704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 8009514 - 8009471
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  8009514 tctctctatttcaatctaaataagtgattttcacatagatctag 8009471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 9283845 - 9283888
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||    
T  9283845 tctctttatttcaatctaaataagtgatttttacatagatctag 9283888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 9529033 - 9528994
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  9529033 tctctttatttcaatctaaataagtgattttcacatagat 9528994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 20569186 - 20569229
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  20569186 tctctttatttcaatctaaataaatgattttcacatagatctag 20569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 25273814 - 25273857
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  25273814 tctctctatttcaatctaaataagtgattttcacatagatctag 25273857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 34024591 - 34024548
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  34024591 tctctctatttcaatctaaataagttattttcacatagatctag 34024548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 43154176 - 43154133
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  43154176 tctctctatttcaatctaaataagtgattttcacatagatctag 43154133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 43444327 - 43444370
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||    
T  43444327 tctctttatttcaatctaaataagtgattttcacatatatctag 43444370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 51317920 - 51317963
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  51317920 tctctctatttcaatctaaataagtgattttcacatagatctag 51317963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 9283731 - 9283777
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||    
T  9283731 cctctccaacaagtcggccctagttttctctctctaggttatctctt 9283777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 16545983 - 16546017
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggta 77  Q
    |||||||||||||||||||||||||||||||||||    
T  16545983 ttctcaaaaggatcttataattaaggacggaggta 16546017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 28298371 - 28298409
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28298371 ttctcaaaaggatcttataattagggacggaggtagtat 28298409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 50766664 - 50766622
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  50766664 tctctttatttcaatctaaataaatgattttcacatagatcta 50766622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 375460 - 375423
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||| |||||||||||||||||||||||||||    
T  375460 tctcaaaagggtcttataattaaggacggaggtagtat 375423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 868105 - 868142
Alignment:
Q  260 atttcaatctaaataagtaattttcacatagatctaga 297  Q
    |||||||||||||||||| |||||||||||||||||||    
T  868105 atttcaatctaaataagttattttcacatagatctaga 868142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 2624438 - 2624475
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  2624438 tatttcaatctaaataagtgattttcacatagatctag 2624475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 13498460 - 13498530
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtatcaattt 87  Q
    ||||||||||||||||||       ||||||||||  |||||||||||| ||||||||||||||| |||||    
T  13498460 agtcttataaaaagggacaaacttttttctcaaaaacatcttataattagggacggaggtagtattaattt 13498530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 13620829 - 13620891
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       ||| |||||||||||||||||||| ||||||||||||||    
T  13620829 gtcttataaaaagggacaattttttttttcaaaaggatcttataattagggacggaggtagta 13620891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 26866863 - 26866900
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26866863 ttctcaaaagggtcttataattaaggacggaggtagta 26866900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 29520139 - 29520201
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||||||||    
T  29520139 gtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 36901111 - 36901147
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||| ||||||||||||||    
T  36901111 tctcaaaaggatcttataattagggacggaggtagta 36901147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 46991285 - 46991241
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||    
T  46991285 tctctctatttcaatctaaatgagtgattttcacatagatctaga 46991241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 3085479 - 3085444
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||||| |||||||||||||||    
T  3085479 tcaaaaggatcttataattagggacggaggtagtat 3085444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 6972630 - 6972669
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggtt 251  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  6972630 cctctccaacaagccggccctaattttctctctctaggtt 6972669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 10389908 - 10389865
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  10389908 tctctctatttcaatctaaataagtgactttcacatagatctag 10389865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 25273694 - 25273741
Alignment:
Q  211 tcctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||||||| || |||||||||||||| || ||||||    
T  25273694 tcctctccaacaagccggccctagttttctctctctagattttctctt 25273741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 26889902 - 26889937
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||||| |||||||||||||||    
T  26889902 tcaaaaggatcttataattagggacggaggtagtat 26889937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 37188747 - 37188704
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||    
T  37188747 tctctatatttcaatctaaataagtgattttcacatatatctag 37188704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 38706865 - 38706826
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  38706865 tctctctatttcaatctaaataagtgattttcacatagat 38706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 49072912 - 49072873
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  49072912 tctctttatttcaatctatataagtgattttcacatagat 49072873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 49680471 - 49680514
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||||||| |||||||| |||||||||| |||||||    
T  49680471 tctctttatttcaatccaaataagtgattttcacatggatctag 49680514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 54623864 - 54623804
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggta 77  Q
    ||||||||||||||||||        ||||||||||||||||||||||| |||||||||||    
T  54623864 agtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggaggta 54623804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 56194533 - 56194576
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  56194533 tctctctatttcaatctaaataagtgactttcacatagatctag 56194576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 4416002 - 4415964
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  4416002 ttctcaaaagggtcttataattagggacggaggtagtat 4415964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 5333797 - 5333751
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || |||| |||||||||||| ||||||    
T  5333797 cctctccaacaagccggccctaattttttctctctaggttttctctt 5333751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 10390022 - 10389976
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || |||||||| |||||||| ||||||    
T  10390022 cctctccaacaagccggccctagttttctctttctaggttttctctt 10389976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 17610020 - 17610058
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  17610020 ttctcaaaaggatcttataattagggacggagggagtat 17610058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 20455181 - 20455219
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  20455181 ttctcaaaagggtcttataattagggacggaggtagtat 20455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 24754115 - 24754077
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  24754115 ttctcaaaaggatcttataattagggacggagggagtat 24754077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 25124245 - 25124283
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  25124245 tttctcaaaagggtcttataattagggacggaggtagta 25124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 28495418 - 28495380
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  28495418 tttctcaaaaggatcttataattagggacagaggtagta 28495380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 29965495 - 29965541
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||| ||||| || ||||||||||||||||| ||||||    
T  29965495 cctctccaacaagtcggccctaattttctctctctaggttttctctt 29965541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 35261127 - 35261165
Alignment:
Q  254 ctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  35261127 ctctttattgcaatctaaataagtgattttcacatagat 35261165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 36391891 - 36391853
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  36391891 ttctcaaaagggtcttataattaaggacggagggagtat 36391853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 37776740 - 37776774
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||| ||||||||||||||||||||||||||    
T  37776740 tcaaaagggtcttataattaaggacggaggtagta 37776774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 39114890 - 39114924
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||| ||||||||||||||    
T  39114890 tcaaaaggatcttataattagggacggaggtagta 39114924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 41191603 - 41191666
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| |||||||||||  ||||||||||||||    
T  41191603 gtcttataaaaagggacaaatttttttctcaaaagggtcttataattagagacggaggtagtat 41191666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 46950029 - 46949991
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  46950029 ttctcaaaagggtcttataattagggacggaggtagtat 46949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 49793128 - 49793090
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  49793128 ttctcaaaagggtcttataattagggacggaggtagtat 49793090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 50766780 - 50766734
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || |||| |||||||||||| ||||||    
T  50766780 cctctccaacaagccggccctagttttttctctctaggttttctctt 50766734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 51335855 - 51335792
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| |||||||||||| || |||||||||||    
T  51335855 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattaaagatggaggtagtat 51335792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 52850454 - 52850488
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggta 77  Q
    ||||||||| |||||||||||||||||||||||||    
T  52850454 ttctcaaaaagatcttataattaaggacggaggta 52850488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 53564355 - 53564393
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  53564355 tttctcaaaagggtcttataattagggacggaggtagta 53564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 56432555 - 56432517
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  56432555 ttctcaaaagggtcttataattagggacggaggtagtat 56432517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 867978 - 868023
Alignment:
Q  213 ctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||| ||||||||| || ||||||||||||||||| ||||||    
T  867978 ctctccaaaaagccggccctagttttctctctctaggttttctctt 868023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 2624318 - 2624363
Alignment:
Q  213 ctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||||| || |||| |||||||||||| ||||||    
T  2624318 ctctccaacaagccggccctagttttttctctctaggttttctctt 2624363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 5743634 - 5743696
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||| ||||    
T  5743634 gtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 6462691 - 6462728
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  6462691 tctcaaaagaatcttataattagggacggaggtagtat 6462728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 6753562 - 6753525
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  6753562 ttctcaaaaggatcttataattagggacggagggagta 6753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 9645698 - 9645661
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  9645698 tatttcaatctaaataagtgactttcacatagatctag 9645661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 18872778 - 18872716
Alignment:
Q  19 tcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  18872778 tcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagtat 18872716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 24073127 - 24073164
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||| | |||||||||||||||||||||||||||    
T  24073127 tctcaaaaaggtcttataattaaggacggaggtagtat 24073164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 31937113 - 31937076
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  31937113 ttctcaaaagggtcttataattagggacggaggtagta 31937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 32899219 - 32899256
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  32899219 tctcaaaagggtcttataattagggacggaggtagtat 32899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 43444218 - 43444259
Alignment:
Q  217 ccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||| || ||||||||||||||||| ||||||    
T  43444218 ccaacaagccggccctagttttctctctctaggttttctctt 43444259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 49373693 - 49373730
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  49373693 ttctcaaaagggtcttataattagggacggaggtagta 49373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 52978744 - 52978777
Alignment:
Q  256 ctttatttcaatctaaataagtaattttcacata 289  Q
    |||||||||||||||||||||| |||||||||||    
T  52978744 ctttatttcaatctaaataagtgattttcacata 52978777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 55014968 - 55015005
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  55014968 ttctcaaaaggatcttataattatggacggagatagta 55015005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 4643792 - 4643835
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  4643792 tctctctatttcaatctaaataagtga-tttcacatagatctaga 4643835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 17678492 - 17678549
Alignment:
Q  16 aagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacgga 73  Q
    |||||||||||||||||||       |||||||| ||||||||||||||| |||||||    
T  17678492 aagtcttataaaaagggacaaaaaaatttctcaataggatcttataattatggacgga 17678549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Complemental strand, 34118741 - 34118713
Alignment:
Q  260 atttcaatctaaataagtaattttcacat 288  Q
    |||||||||||||||||||||||||||||    
T  34118741 atttcaatctaaataagtaattttcacat 34118713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 35351312 - 35351272
Alignment:
Q  256 ctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||| ||||||||| || |||||||||||||||    
T  35351312 ctttatttcaatttaaataagtgatattcacatagatctag 35351272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 37352581 - 37352549
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggagg 75  Q
    ||||||||||| |||||||||||||||||||||    
T  37352581 ttctcaaaagggtcttataattaaggacggagg 37352549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 37357480 - 37357448
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggagg 75  Q
    ||||||||||| |||||||||||||||||||||    
T  37357480 ttctcaaaagggtcttataattaaggacggagg 37357448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 55563128 - 55563164
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  55563128 tctcaaaagggtcttataattagggacggaggtagta 55563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 27477081 - 27477125
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  27477081 tctctatatttcaatctaaataagtaattttcacatagatctaga 27477125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 36233931 - 36233975
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  36233931 tctctttatttcaatctaaataagtgattttcacatagatctaga 36233975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 27249306 - 27249263
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  27249306 tctctttatttcaatctaaataagtgattttcacatagatctag 27249263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 30420603 - 30420646
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  30420603 tctctttatttcaatctaaataagtgattttcacatagatctag 30420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 42949641 - 42949684
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  42949641 tctctttatttcaatctaaataagtgattttcacatagatctag 42949684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 9701132 - 9701066
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtatcaa 84  Q
    |||||||||||||||||       ||| |||||||| ||||||||||||||||||||||||||||||    
T  9701132 gtcttataaaaagggacaaattattttttcaaaagggtcttataattaaggacggaggtagtatcaa 9701066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 21570563 - 21570519
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  21570563 tctctatatttcaatctaaataagtgattttcacatagatctaga 21570519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 3270379 - 3270340
Alignment:
Q  257 tttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3270379 tttatttcaatctaaataagtgattttcacatagatctag 3270340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 6173558 - 6173601
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  6173558 tctctctatttcaatctaaataagtgattttcacatagatctag 6173601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 8971781 - 8971738
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  8971781 tctctttattttaatctaaataagtgattttcacatagatctag 8971738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 31581874 - 31581831
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  31581874 tctctctatttcaatctaaataagtgattttcacatagatctag 31581831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 34598914 - 34598957
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  34598914 tctctctatttcaatctaaataagtgattttcacatagatctag 34598957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 45128130 - 45128173
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| | ||||||||||||||||    
T  45128130 tctctttatttcaatctaaataagtgactttcacatagatctag 45128173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 34598799 - 34598845
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||    
T  34598799 cctctccaacaagccggccctaattttctctctctaggttttctctt 34598845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 40660080 - 40660042
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  40660080 tatttcaatctaaataagtgattttcacatagatctaga 40660042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 44573882 - 44573920
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  44573882 ttctcaaaagggtcttataattaaggacggaggtagtat 44573920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 6027654 - 6027617
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||||||| |||||||||||||||    
T  6027654 tctcaaaaggatcttataattagggacggaggtagtat 6027617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 11852185 - 11852222
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  11852185 ttctcaaaaggatcttataattagggacggaggtagta 11852222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 16805791 - 16805836
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatcaattta 88  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  16805791 ttctcaaaaggatcttataattagggacggagggagtatcacttta 16805836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 16845072 - 16845117
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatcaattta 88  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  16845072 ttctcaaaaggatcttataattagggacggagggagtatcacttta 16845117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 23789031 - 23788969
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||||||||||||| ||||    
T  23789031 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattaaggacggagggagta 23788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 7116275 - 7116336
Alignment:
Q  19 tcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||       |||||||||||| ||||||||||| ||||||||||||||    
T  7116275 tcttataaaaagggacaattttttttctcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 8295358 - 8295314
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatcaattt 87  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||    
T  8295358 ttctcaaaaggatcttataattagggacgaaggtagtaccaattt 8295314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 2808625 - 2808582
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  2808625 tctctctatttcagtctaaataagtgattttcacatagatctag 2808582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 7015865 - 7015826
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  7015865 tctctttatttcaatctaaataattgattttcacatagat 7015826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 8805793 - 8805836
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||    
T  8805793 tctctttatttcaatttaaataagtgattttcacatggatctag 8805836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 22421662 - 22421705
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  22421662 tctctctatttcaatctaaataagtgactttcacatagatctag 22421705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 26025564 - 26025521
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| |||||||||||||||||||  |||||||||||||||||    
T  26025564 tctctctatttcaatctaaataagtggttttcacatagatctag 26025521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 26322267 - 26322331
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||        ||||||||||| ||||||||||| |||||||||||||||    
T  26322267 agtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 26322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 296
Target Start/End: Original strand, 27949357 - 27949392
Alignment:
Q  261 tttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27949357 tttcaatctaaataagtgattttcacatagatctag 27949392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 32680737 - 32680694
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  32680737 tctctctatttcaatctaaataagtgactttcacatagatctag 32680694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 32913168 - 32913211
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||    
T  32913168 tctctatatttcaatttaaataagtgattttcacatagatctag 32913211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 1143232 - 1143295
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||       ||||||||||||||||||||| ||  |||||||||||||    
T  1143232 agtcttataaaaagggacaaaaaaatttctcaaaaggatcttataactagagacggaggtagta 1143295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 1859584 - 1859546
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  1859584 ttctcaaaagggtcttataattaaggacggatgtagtat 1859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 2060354 - 2060316
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  2060354 tttctcaaaagggtcttataattagggacggaggtagta 2060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 8841657 - 8841695
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  8841657 ttctcaaaagggtcttataattaaggacggagggagtat 8841695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 296
Target Start/End: Complemental strand, 9986491 - 9986457
Alignment:
Q  262 ttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||||||| ||||||||||||||||||    
T  9986491 ttcaatctaaataagtgattttcacatagatctag 9986457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 12360494 - 12360456
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  12360494 ttctcaaaagggtcttataattaaagacggaggtagtat 12360456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 12890183 - 12890246
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  12890183 gtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggaggtagtat 12890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 15228149 - 15228187
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  15228149 ttctcaaaaggatcttataattagggacggagggagtat 15228187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 22897428 - 22897390
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  22897428 ttctcaaaaggatcttataattagggacggagggagtat 22897390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 27249420 - 27249374
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||||  ||| ||||||||||||||||| ||||||    
T  27249420 cctctccaacaagccggttttagttttctctctctaggttttctctt 27249374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 28566189 - 28566151
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  28566189 tttctcaaaagggtcttataattagggacggaggtagta 28566151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 30466142 - 30466108
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggta 77  Q
    ||||||||||||||||||||||| |||||||||||    
T  30466142 ttctcaaaaggatcttataattagggacggaggta 30466108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 31581971 - 31581925
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||| |||||||| |||| |||||||||||| ||||||    
T  31581971 cctctccaacaagtcggccttaattttttctctctaggttttctctt 31581925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 31751131 - 31751068
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||| ||||||| ||||||||||| |||||||||||||||    
T  31751131 gtcttataaaaagggacaaaaaaatttcacaaaagggtcttataattagggacggaggtagtat 31751068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 40607764 - 40607701
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||| |||||    
T  40607764 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 40607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 40626182 - 40626140
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||| ||||||||||||||||||  |||||||||||||||||    
T  40626182 tctctctatttcaatctaaataagggattttcacatagatcta 40626140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 44436795 - 44436858
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||       |||||||||||| |||||| |||| ||||||||||||||    
T  44436795 agtcttataaaaagggacaaaaaattttctcaaaagggtcttatcattagggacggaggtagta 44436858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 3095361 - 3095299
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| ||||||||||||||    
T  3095361 gtcttataaaaagggacaaattattttttcaaaagggtcttataattagggacggaggtagta 3095299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 3308848 - 3308881
Alignment:
Q  256 ctttatttcaatctaaataagtaattttcacata 289  Q
    |||||||||||||||||||||| |||||||||||    
T  3308848 ctttatttcaatctaaataagtgattttcacata 3308881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 3725107 - 3725148
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatct 294  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||    
T  3725107 tctctctatttcaatataaataagtgattttcacatagatct 3725148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 8912874 - 8912911
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  8912874 ttctcaaaagggtcttataattagggacggaggtagta 8912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 19034448 - 19034415
Alignment:
Q  47 caaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||| ||||||||||||    
T  19034448 caaaaggatcttataattaagaacggaggtagta 19034415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 19353228 - 19353191
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||||  |||||||||||||    
T  19353228 ttctcaaaaggatcttataattagcgacggaggtagta 19353191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 27560268 - 27560206
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||| ||||    
T  27560268 gtcttataaaaagggacaaaaatttttctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 30830313 - 30830379
Alignment:
Q  14 agaagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||       ||| |||||| | ||||||||||||| ||||||||||||    
T  30830313 agaagtcttataaaaagggacaaattattttttcaaaaaggtcttataattaagaacggaggtagta 30830379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 32121006 - 32120944
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       ||| |||||||||||||||||||| ||||||||| ||||    
T  32121006 gtcttataaaaagggacaaatttttttttcaaaaggatcttataattagggacggagggagta 32120944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 34944388 - 34944458
Alignment:
Q  19 tcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtatcaatttat 89  Q
    ||||||||||||||||       ||||||||| |||||||||||||| |||||||| |||||  |||||||    
T  34944388 tcttataaaaagggacaaaaaaatttctcaaagggatcttataattagggacggagatagtaataatttat 34944458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 41968202 - 41968235
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggt 76  Q
    ||||||||||||||||||||||| ||||||||||    
T  41968202 ttctcaaaaggatcttataattagggacggaggt 41968235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 45628879 - 45628916
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  45628879 ttctcaaaagggtcttataattaaggatggaggtagta 45628916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 1143029 - 1142997
Alignment:
Q  48 aaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||| ||||||||||||||    
T  1143029 aaaaggatcttataattagggacggaggtagta 1142997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 4192765 - 4192801
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacata 289  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  4192765 tctctatatttcaatctaaataagtgattttcacata 4192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 4228060 - 4228100
Alignment:
Q  255 tctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  4228060 tctttatttcaatataaataagtgatttacacatagatcta 4228100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 18694974 - 18695014
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatc 293  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  18694974 tctctctatttcaatctaaataagtgatttttacatagatc 18695014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 20047348 - 20047304
Alignment:
Q  214 tctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||| ||||| || ||||||||||||||||| ||||||    
T  20047348 tctccaacaagacggccataattttctctctctaggttttctctt 20047304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 2057993 - 2057950
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  2057993 tctctttatttcaatctaaataagtgattttcacatagatctag 2057950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 10649378 - 10649421
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  10649378 tctctttatttcaatctaaataagtgattttcacatagatctag 10649421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 26578174 - 26578217
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  26578174 tctctttatttcaatctaaataagtgattttcacatagatctag 26578217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 30371649 - 30371692
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  30371649 tctctttatttcaatctaaataagtgattttcacatagatctag 30371692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 3028076 - 3028012
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||       |||||||||||| ||||||||||| |||||||||||||||    
T  3028076 agtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggaggtagtat 3028012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 20257849 - 20257806
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  20257849 tctctctatttcaatctaaataagtgattttcacatagatctag 20257806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 27267015 - 27266972
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  27267015 tctctctatttcaatctaaataagtgattttcacatagatctag 27266972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 30298133 - 30298176
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  30298133 tctctatatttcaatctaaataagtgattttcacatagatctag 30298176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 34881634 - 34881677
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  34881634 tctctctatttcaatctaaataagtgattttcacatagatctag 34881677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 40643131 - 40643092
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatc 82  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  40643131 ttctcaaaaggatcttataattagggacggaggtagtatc 40643092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 22657805 - 22657767
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22657805 ttctcaaaaggatcttataattagggacggaggtagtat 22657767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 35475485 - 35475447
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  35475485 tatttcaatctaaataagtgattttcacatagatctaga 35475447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 1697024 - 1696979
Alignment:
Q  250 ttatctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||    
T  1697024 ttatctcactatttcaatctaaataagtgattttcacatagatcta 1696979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 43261966 - 43261929
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  43261966 tatttcaatctaaataagtgattttcacatagatctag 43261929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 42561349 - 42561381
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggagg 75  Q
    |||||||||||||||||||||||||||||||||    
T  42561349 ttctcaaaaggatcttataattaaggacggagg 42561381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 781314 - 781357
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||    
T  781314 tctctatatttcaatctaaataagtgattttcagatagatctag 781357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 5283112 - 5283049
Alignment:
Q  16 aagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||       ||| ||||||||||||||||||||||||| |||||||||    
T  5283112 aagtcttataaaaagggacaatttttttt-tcaaaaggatcttataattaaggacagaggtagta 5283049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 7241707 - 7241750
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  7241707 tctctctatttcaatctaaataagtgactttcacatagatctag 7241750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 7246883 - 7246926
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  7246883 tctctctatttcaatctaaataagtgactttcacatagatctag 7246926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 18677621 - 18677578
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  18677621 tctctctattttaatctaaataagtgattttcacatagatctag 18677578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 21060436 - 21060397
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  21060436 tctctatatttcaatctaaataagtgattttcacatagat 21060397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 21750196 - 21750231
Alignment:
Q  48 aaaaggatcttataattaaggacggaggtagtatca 83  Q
    ||||||||||||||||||||||||||||||| ||||    
T  21750196 aaaaggatcttataattaaggacggaggtagcatca 21750231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 23260137 - 23260176
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  23260137 tttctcaaaagggtcttataattagggacggaggtagtat 23260176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 7150490 - 7150448
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||| ||||||||||||||||||| | |||||||||||||||    
T  7150490 tctctctatttcaatctaaataagtgactttcacatagatcta 7150448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 7940514 - 7940451
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  7940514 gtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 7940451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 8949849 - 8949811
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  8949849 ttctcaaaagggtcttataattagggacggaggtagtat 8949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 14649221 - 14649187
Alignment:
Q  47 caaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||| |||||||||||||||    
T  14649221 caaaaggatcttataattagggacggaggtagtat 14649187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 28235516 - 28235554
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctaga 297  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  28235516 tatttcgatctaaataagtgattttcacatagatctaga 28235554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 34889282 - 34889316
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||| ||||||||||||||||||||||||||||    
T  34889282 tcaaaaagatcttataattaaggacggaggtagta 34889316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 36344644 - 36344602
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||    
T  36344644 tctctatatttcaatctaaataagttattttcacatggatcta 36344602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 41384172 - 41384210
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  41384172 ttctcaaaaggatcttataattagggacggagggagtat 41384210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 42579688 - 42579734
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||| ||| || ||||||||||||||||| ||||||    
T  42579688 cctctccaacaagcccgccctagttttctctctctaggttttctctt 42579734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 3160503 - 3160565
Alignment:
Q  19 tcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||       |||||||||| ||||||||||||| ||||||| |||||||    
T  3160503 tcttataaaaagggacaaaaaattttctcaaaatgatcttataattagggacggatgtagtat 3160565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 7734867 - 7734830
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtatca 83  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  7734867 tcaaaaggatcttataattagagacggaggtagtatca 7734830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 10148730 - 10148767
Alignment:
Q  260 atttcaatctaaataagtaattttcacatagatctaga 297  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  10148730 attttaatctaaataagtgattttcacatagatctaga 10148767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 23286474 - 23286511
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  23286474 ttctcaaaagggtcttataattagggacggaggtagta 23286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 27751857 - 27751894
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  27751857 tatttcaatataaataagtgattttcacatagatctag 27751894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 41184712 - 41184667
Alignment:
Q  213 ctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||||| || |||||| |||||||||| ||||||    
T  41184712 ctctccaacaagccggccctaattttctttctctaggttttctctt 41184667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 292
Target Start/End: Original strand, 42579811 - 42579844
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||||||||||||| ||||||||||||||    
T  42579811 tatttcaatctaaataagtgattttcacatagat 42579844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 43060411 - 43060448
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  43060411 ttctcaaaagggtcttataattagggacggaggtagta 43060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 16926490 - 16926446
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagtatcaatt 86  Q
    |||||||||||| ||||||||||| ||| ||||||||||| ||||    
T  16926490 tttctcaaaagggtcttataattagggatggaggtagtattaatt 16926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 18251051 - 18251007
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatcaattt 87  Q
    |||| |||||| ||||||||||||||||||||||| || ||||||    
T  18251051 ttcttaaaagggtcttataattaaggacggaggtaataacaattt 18251007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 19281213 - 19281169
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctc 256  Q
    ||||||||||||| ||||| || ||||||||||||||||| ||||    
T  19281213 cctctccaacaagtcggccctaattttctctctctaggttttctc 19281169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 19571940 - 19571976
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  19571940 tctcaaaagggtcttataattagggacggaggtagta 19571976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 27576504 - 27576460
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||| ||||||||| || ||||||||||||||||    
T  27576504 tctctctatttcaatgtaaataagtgatattcacatagatctaga 27576460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 40738442 - 40738410
Alignment:
Q  48 aaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||| ||||||||||||||    
T  40738442 aaaaggatcttataattagggacggaggtagta 40738410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 41383945 - 41383893
Alignment:
Q  47 caaaaggatcttataattaaggacggaggtagtatcaatttatagaaaatagt 99  Q
    ||||||||||||||||||| ||||||||| ||||| | |||||| | ||||||    
T  41383945 caaaaggatcttataattagggacggagggagtattattttatacataatagt 41383893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 32607387 - 32607430
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  32607387 tctctttatttcaatctaaataagtgattttcacatagatctag 32607430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 35499356 - 35499313
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  35499356 tctctttatttcaatctaaataagtgattttcacatagatctag 35499313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 14464427 - 14464469
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  14464427 tctctttatttcaatctaaataagtgattttcacatagatcta 14464469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 53164229 - 53164163
Alignment:
Q  14 agaagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||        ||||||||||||||||||||||| ||||||||||||||    
T  53164229 agaagtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggaggtagta 53164163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 4172486 - 4172529
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  4172486 tctctctatttcaatctaaataagtgattttcacatagatctag 4172529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 25631682 - 25631639
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  25631682 tctctctatttcaatctaaataagtgattttcacatagatctag 25631639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 27688049 - 27687985
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||       ||| |||||||| |||||||||||||||||||||||||||    
T  27688049 agtcttataaaaagggacaaaaaaatttgtcaaaagggtcttataattaaggacggaggtagtat 27687985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 38440732 - 38440689
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  38440732 tctctctatttcaatctaaataagtgattttcacatagatctag 38440689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 44907554 - 44907511
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  44907554 tctctttatttcaatctaaacaagtgattttcacatagatctag 44907511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 48887911 - 48887983
Alignment:
Q  8 tagcatagaagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||| || ||||||||||||||||||       ||||||||||| |||||||||||| ||||||||||||||    
T  48887911 tagcaaagcagtcttataaaaagggacaaaaaaatttctcaaaagaatcttataattatggacggaggtagta 48887983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 12116014 - 12116056
Alignment:
Q  254 ctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  12116014 ctctttatttcaatctaaataagtgattttcacaaagatctag 12116056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 27646305 - 27646343
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  27646305 tttctcaaaaggatcttataattagggacggaggtagta 27646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 28673294 - 28673332
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28673294 ttctcaaaaggatcttataattagggacggaggtagtat 28673332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 6784500 - 6784463
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  6784500 ttctcaaaagggtcttataattaaggacggaggtagta 6784463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 21459019 - 21458982
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21459019 ttctcaaaaggatcttataattagggacggaggtagta 21458982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 24813636 - 24813599
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtatca 83  Q
    |||||||||||||||||||| |||||||||||||||||    
T  24813636 tcaaaaggatcttataattagggacggaggtagtatca 24813599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 29454787 - 29454824
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||| |||||||||||||||||||||||||||    
T  29454787 tctcaaaagggtcttataattaaggacggaggtagtat 29454824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 33212434 - 33212397
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  33212434 ttctcaaaaggatcttataattagggacggaggtagta 33212397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 46878414 - 46878476
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||||||||||||| ||||    
T  46878414 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattaaggacggagggagta 46878476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 50517522 - 50517559
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  50517522 ttctcaaaaggatcttataattagggacggaggtagta 50517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 38855192 - 38855148
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||| ||||||||||||||| |||||||||||||||||||    
T  38855192 tctctctatatcaatctaaataagtgattttcacatagatctaga 38855148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 45513410 - 45513370
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtatcaatt 86  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  45513410 tcaaaagggtcctataattaaggacggaggtagtatcaatt 45513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 46934562 - 46934602
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatc 293  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  46934562 tctctctatttcaatctaaataagtgattttcacatagatc 46934602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 3850610 - 3850567
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  3850610 tctctctatttcaatctaaataagtgactttcacatagatctag 3850567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 17237722 - 17237761
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  17237722 tctctctatttcaatctaaataagtgattttcacatagat 17237761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 19897810 - 19897874
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  19897810 agtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 19897874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 29503382 - 29503425
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||    
T  29503382 tctctatatttcaatctaaataattgattttcacatagatctag 29503425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 294
Target Start/End: Original strand, 31794005 - 31794040
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatct 294  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31794005 tatttcaatctaaataagtgattttcacatagatct 31794040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 36906041 - 36906080
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  36906041 tctctttatttcaatataaataagtgattttcacatagat 36906080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 39917551 - 39917508
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| || |||||||||||||||| ||||||||||||||||||    
T  39917551 tctctctaattcaatctaaataagtgattttcacatagatctag 39917508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 41750961 - 41750926
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41750961 tcaaaaggatcatataattaaggacggaggtagtat 41750926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 43158712 - 43158780
Alignment:
Q  19 tcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtatcaattt 87  Q
    ||||||||||||||||       |||||||||| ||||||||||||| ||||||||| |||||| ||||    
T  43158712 tcttataaaaagggacaattttttttctcaaaatgatcttataattagggacggaggaagtatctattt 43158780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 46845492 - 46845531
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatc 82  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  46845492 ttctcaaaagggtcttataattagggacggaggtagtatc 46845531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 50611572 - 50611529
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||    
T  50611572 tctctatatttcaatctaaataagtgattttcatatagatctag 50611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 2342411 - 2342453
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatcta 295  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||    
T  2342411 tctctctatttcaatctaaataagtgattttcacatatatcta 2342453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 4759351 - 4759389
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  4759351 ttctcaaaagggtcttataattagggacggaggtagtat 4759389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 7051720 - 7051758
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  7051720 ttctcaaaaggatcttataattagggacggagggagtat 7051758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 7181412 - 7181349
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||| |||||    
T  7181412 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtat 7181349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 10015764 - 10015827
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  10015764 gtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 10015827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 16776886 - 16776924
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  16776886 tttctcaaaaggatcctataattagggacggaggtagta 16776924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 24087335 - 24087373
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  24087335 ttctcaaaagggtcttataattagggacggaggtagtat 24087373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 29719709 - 29719747
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  29719709 tttctcaaaagggtcttataattatggacggaggtagta 29719747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 30819940 - 30819877
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| ||||||| ||| |||||||||||||||    
T  30819940 gtcttataaaaagggacaattttttttctcaaaagggtcttatagttagggacggaggtagtat 30819877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 32607273 - 32607319
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    ||||||||||||||||||| || |||||||||||||| || ||||||    
T  32607273 cctctccaacaagccggccctagttttctctctctagattttctctt 32607319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 32963105 - 32963143
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  32963105 ttctcaaaaggatcttataattagggacggagggagtat 32963143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 33360919 - 33360885
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||| ||||||||||||||||||||||||||    
T  33360919 tcaaaagggtcttataattaaggacggaggtagta 33360885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 33868485 - 33868447
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  33868485 ttctcaaaaggatcttataattagggacggagggagtat 33868447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 38855305 - 38855259
Alignment:
Q  212 cctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||| || || ||||||||||||||||| ||||||    
T  38855305 cctctccaacaagccgaccctagttttctctctctaggttttctctt 38855259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 41392880 - 41392918
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  41392880 ttctcaaaagggtcttataattagggacggaggtagtat 41392918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 48909934 - 48909871
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       |||||||||||| ||||||||||| |||| ||||||||||    
T  48909934 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggactgaggtagtat 48909871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 49543740 - 49543677
Alignment:
Q  17 agtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||       |||||||||||| ||||||||||| ||||||| ||||||    
T  49543740 agtcttataaaaagggacaacaaattttctcaaaagggtcttataattagggacggaagtagta 49543677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 54866536 - 54866570
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||||| ||||||||||||||    
T  54866536 tcaaaaggatcttataattagggacggaggtagta 54866570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 2993295 - 2993258
Alignment:
Q  44 tctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  2993295 tctcaaaatgatcttataattagggacggaggtagtat 2993258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 8321962 - 8321925
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  8321962 ttctcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 8546941 - 8546908
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggt 76  Q
    ||||||||||| ||||||||||||||||||||||    
T  8546941 ttctcaaaagggtcttataattaaggacggaggt 8546908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 9582305 - 9582243
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||| ||||||||||    
T  9582305 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggatggaggtagta 9582243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 14428672 - 14428610
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||| ||||||||||| ||||||||| ||||    
T  14428672 gtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 15996748 - 15996810
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| ||||||||||||||    
T  15996748 gtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggaggtagta 15996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 22103929 - 22103974
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatcaattta 88  Q
    ||||||||||| ||||||||||| ||||||||| ||||| ||||||    
T  22103929 ttctcaaaagggtcttataattagggacggagggagtattaattta 22103974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 31186820 - 31186758
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       ||| |||||||| |||||||||||||||||||| |||||    
T  31186820 gtcttataaaaagggacaattttttttttcaaaagggtcttataattaaggacggagttagta 31186758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 31397804 - 31397767
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggaggtagt 79  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  31397804 tttctcaaaagggtcttataattaaggaaggaggtagt 31397767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 41824141 - 41824101
Alignment:
Q  46 tcaaaaggatcttataattaaggacggaggtagtatcaattt 87  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  41824141 tcaaaagg-tcttataattaaggacggaggtagtatctattt 41824101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 45324087 - 45324124
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  45324087 ttctcaaaatggtcttataattaaggacggaggtagta 45324124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 46934449 - 46934494
Alignment:
Q  213 ctctccaacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||| ||||| || ||||||||||||||||| ||||||    
T  46934449 ctctccaacaagtcggccctaattttctctctctaggttttctctt 46934494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 47008477 - 47008539
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       |||||||||||  ||||||||||| ||||||||||||||    
T  47008477 gtcttataaaaagggacaaaaaaatttctcaaaagtgtcttataattagggacggaggtagta 47008539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 51489431 - 51489373
Alignment:
Q  16 aagtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggag 74  Q
    |||||||||||||||||||       |||||||||||| ||||||||||| ||||||||    
T  51489431 aagtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggag 51489373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 10656728 - 10656684
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtatcaattt 87  Q
    ||||||||||| ||||||||||| || |||||||||||| |||||    
T  10656728 ttctcaaaagggtcttataattaggggcggaggtagtattaattt 10656684  T

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Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 15095259 - 15095198
Alignment:
Q  19 tcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||       |||||||||||| | ||||||||| ||||||||||||||    
T  15095259 tcttataaaaagggacaattttttttctcaaaagggttttataattagggacggaggtagta 15095198  T

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Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 22527620 - 22527652
Alignment:
Q  42 tttctcaaaaggatcttataattaaggacggag 74  Q
    |||||||||||| ||||||||||||||||||||    
T  22527620 tttctcaaaagggtcttataattaaggacggag 22527652  T

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Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 42044257 - 42044289
Alignment:
Q  48 aaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||| ||||||||||||||    
T  42044257 aaaaggatcttataattagggacggaggtagta 42044289  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 201526 - 201482
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagatctaga 297  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  201526 tctctatatttcaatctaaataagtgattttcacatagatctaga 201482  T

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Target: scaffold0250 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 9426 - 9464
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9426 ttctcaaaaggatcttataattagggacggaggtagtat 9464  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 8648 - 8685
Alignment:
Q  259 tatttcaatctaaataagtaattttcacatagatctag 296  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8648 tatttcaatctaaataagtgattttcacatagatctag 8685  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 291
Target Start/End: Complemental strand, 361945 - 361913
Alignment:
Q  259 tatttcaatctaaataagtaattttcacataga 291  Q
    |||||||||||||||||||||||||||||||||    
T  361945 tatttcaatctaaataagtaattttcacataga 361913  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 362057 - 362017
Alignment:
Q  218 caacaagccggccttatttttctctctctaggttatctctt 258  Q
    |||||||||||||||| |||||||||| |||||| ||||||    
T  362057 caacaagccggccttagttttctctctttaggttttctctt 362017  T

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Target: scaffold0146 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 16477 - 16438
Alignment:
Q  253 tctctttatttcaatctaaataagtaattttcacatagat 292  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  16477 tctctctatttcaatctaaataagtgattttcacatagat 16438  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 164276 - 164213
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagtat 81  Q
    |||||||||||||||||       ||| |||||||| ||||||||||| |||||||||||||||    
T  164276 gtcttataaaaagggacaattttttttttcaaaagggtcttataattagggacggaggtagtat 164213  T

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Target: scaffold0674 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 5188 - 5151
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  5188 ttctcaaaagggtcttataattagggacggaggtagta 5151  T

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Target: scaffold0549 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 10182 - 10219
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  10182 ttctcaaaagggtcttataattagggacggaggtagta 10219  T

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Target: scaffold0457 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 4663 - 4700
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  4663 ttctcaaaagaatcttataattagggacggaggtagta 4700  T

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Target: scaffold0308 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 14348 - 14385
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  14348 ttctcaaaagggtcttataattaaggacggagggagta 14385  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 18534 - 18497
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  18534 ttctcaaaagggtcttataattagggacggaggtagta 18497  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 17526 - 17464
Alignment:
Q  18 gtcttataaaaagggacnnnnnnntttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    |||||||||||||||||       ||| |||||||||||||||||||| |||||||| |||||    
T  17526 gtcttataaaaagggacaaattattttttcaaaaggatcttataattagggacggagatagta 17464  T

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Target: scaffold0161 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 3475 - 3438
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  3475 ttctcaaaagggtcttataattagggacggaggtagta 3438  T

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Target: scaffold0107 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 48691 - 48654
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  48691 ttctcaaaagggtcttataattagggacggaggtagta 48654  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 104061 - 104098
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  104061 ttctcaaaaagatcttataattagggacggaggtagta 104098  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 117883 - 117846
Alignment:
Q  43 ttctcaaaaggatcttataattaaggacggaggtagta 80  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  117883 ttctcaaaaggatcttataattagggacggaggaagta 117846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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