View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_174 (Length: 294)
Name: NF9839A_low_174
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_174 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 22 - 294
Target Start/End: Complemental strand, 37696759 - 37696487
Alignment:
| Q |
22 |
tcagggcaagagtaaagagaagcacaaaggtaatcaaaagaagtgtcacaaatggttgaactttttacttggcaatagaggaggatgaaagtggaggaag |
121 |
Q |
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| T |
37696759 |
tcagggcaagagtaaagagaagcacaaaggtaatcaaaagaagtgtcacaaatggttgaactttttacttggcaatggaggaggatgaaagtggaggaag |
37696660 |
T |
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| Q |
122 |
atatttggaatggtgcagttaaatctatgccaaagtttggtgaggtttgcatggtagtgcaagtagacatgtagggtggtgtgagtattagagtggaagt |
221 |
Q |
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| T |
37696659 |
atatttggaatggtgcagttaaatctatgccaaagtttggtgaggtttgcatggtagtgcaagtagacatgtagggtggtgtgagtattagagtggaagt |
37696560 |
T |
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| Q |
222 |
ggtgtatgaaatggaggttatagggtatgaggatgtgtgagttttgaggatgagttggtctaatgttccattt |
294 |
Q |
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| T |
37696559 |
ggtgtatgaaatggaggttatagggtatgaggatgtgtgagttttgaggatgagttggtctaatgttccattt |
37696487 |
T |
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