View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_211 (Length: 277)
Name: NF9839A_low_211
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_211 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 15956588 - 15956864
Alignment:
| Q |
1 |
attaagatagttatctaaattacttttaatttgttttaatattttaagtgaatgtatcaatatataaaactatatacataccaaataatttgcggaagtt |
100 |
Q |
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| T |
15956588 |
attaagatagttatctaaattacttttaatttgttttaatattttaagtgaatgtatcaatatataaaactatatacataccaaataatttgcggaagtt |
15956687 |
T |
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| Q |
101 |
gaaccattggtaagagcaagcactagcttgtatttgtatttccaaattcccatgagcttgtttaacttcaaaggcattaccaacatggagcaaccacaat |
200 |
Q |
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| T |
15956688 |
gaaccattggtaagagcaagcactagcttgtatttgtatttccaaattcccatgagcttgtttaacttcaaaggcattaccaacatggagcaaccacaat |
15956787 |
T |
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| Q |
201 |
tgtgaaggtacttcaagtggttttctccaatctcnnnnnnngctttcaggtttgtttggaaacctagggagtaagta |
277 |
Q |
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| T |
15956788 |
tgtgaaggtacttcaagtggttttctccaatctctttttttgctttcaggtttgtttggaaacctagggagtaagta |
15956864 |
T |
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