View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_213 (Length: 277)
Name: NF9839A_low_213
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_213 |
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Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 21493188 - 21493452
Alignment:
| Q |
1 |
tcaagaatgataattgttatatcgacacactcactaaccctctttcaacaataatctctattattaattaaaatttgtattaatctcactatgaatttca |
100 |
Q |
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| T |
21493188 |
tcaagaatgataattgttatatcgacacactcactaaccctctttcaacaataatctctattattaattaaaatttgtattaatctcactatgaatttca |
21493287 |
T |
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| Q |
101 |
accaataatagagtgtggaacacagttgaattggtaacgtgcctcatatttgaaatatgaaaacagttatgtcatagaaatcaaattgaatcttgagtta |
200 |
Q |
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| T |
21493288 |
accaataatagagtgtggaacacagttgaattggtaacgtgcctcatatttgaaatatgaaaacagttatgtcatagaaatcaaattgaatcttgagtta |
21493387 |
T |
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| Q |
201 |
tgcaatggtgccatgcaaacaaaattaatataagcattttgtttacttttttcatgtgatgtcca |
265 |
Q |
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| T |
21493388 |
tgcaatggtgccatgcaaacaaaattaatataagcattttgattacttttttcatgtgatgtcca |
21493452 |
T |
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