View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_275 (Length: 251)

Name: NF9839A_low_275
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_275
NF9839A_low_275
[»] chr6 (45 HSPs)
chr6 (1-235)||(34644865-34645099)
chr6 (1-235)||(19880066-19880300)
chr6 (1-235)||(18795458-18795692)
chr6 (1-235)||(25768959-25769193)
chr6 (51-235)||(19435770-19435954)
chr6 (1-215)||(21472389-21472603)
chr6 (3-215)||(19488553-19488765)
chr6 (1-215)||(15460124-15460338)
chr6 (54-232)||(19454191-19454369)
chr6 (51-235)||(14380796-14380980)
chr6 (1-235)||(21563411-21563645)
chr6 (1-235)||(21569270-21569504)
chr6 (51-232)||(8762262-8762443)
chr6 (51-235)||(28282142-28282326)
chr6 (51-232)||(5296535-5296716)
chr6 (51-235)||(10468178-10468362)
chr6 (51-185)||(14379246-14379380)
chr6 (5-235)||(23079237-23079467)
chr6 (54-215)||(18197057-18197218)
chr6 (1-235)||(5838498-5838732)
chr6 (54-211)||(18966624-18966781)
chr6 (26-187)||(19865503-19865664)
chr6 (48-215)||(24365200-24365367)
chr6 (135-235)||(1542497-1542597)
chr6 (60-235)||(16626055-16626230)
chr6 (1-193)||(16926919-16927111)
chr6 (1-193)||(16962724-16962916)
chr6 (3-187)||(20636582-20636766)
chr6 (60-215)||(22761793-22761948)
chr6 (1-215)||(25609140-25609354)
chr6 (54-235)||(15896862-15897043)
chr6 (69-187)||(27566327-27566445)
chr6 (150-235)||(2874231-2874316)
chr6 (1-186)||(22434686-22434871)
chr6 (1-186)||(22443084-22443269)
chr6 (60-187)||(25113368-25113495)
chr6 (72-235)||(27188204-27188367)
chr6 (72-235)||(27260873-27261036)
chr6 (69-187)||(24312515-24312633)
chr6 (69-187)||(29591267-29591385)
chr6 (26-187)||(22077994-22078155)
chr6 (72-187)||(28262547-28262662)
chr6 (72-187)||(28341296-28341411)
chr6 (128-215)||(16098838-16098925)
chr6 (126-215)||(18436397-18436486)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-235)||(32814-33048)
scaffold0076 (51-232)||(56087-56268)
[»] chr7 (49 HSPs)
chr7 (1-235)||(19613569-19613803)
chr7 (1-236)||(11387549-11387784)
chr7 (1-235)||(19148105-19148339)
chr7 (1-235)||(20747504-20747738)
chr7 (51-236)||(14434584-14434769)
chr7 (3-235)||(16949595-16949826)
chr7 (1-235)||(15101724-15101958)
chr7 (51-235)||(578-762)
chr7 (51-232)||(14285547-14285728)
chr7 (51-232)||(15341328-15341509)
chr7 (3-235)||(12205923-12206155)
chr7 (51-235)||(18053124-18053308)
chr7 (54-232)||(13666434-13666612)
chr7 (51-215)||(12456616-12456780)
chr7 (1-235)||(14263365-14263599)
chr7 (1-199)||(16071416-16071613)
chr7 (129-236)||(14130766-14130873)
chr7 (51-235)||(23505041-23505225)
chr7 (3-235)||(14040588-14040820)
chr7 (3-235)||(14350618-14350850)
chr7 (48-215)||(12457554-12457721)
chr7 (85-215)||(15625465-15625595)
chr7 (3-235)||(11771386-11771618)
chr7 (51-215)||(13022271-13022435)
chr7 (26-215)||(15204532-15204721)
chr7 (58-215)||(321237-321394)
chr7 (26-235)||(15153825-15154034)
chr7 (48-215)||(26117773-26117940)
chr7 (60-235)||(9596950-9597125)
chr7 (60-187)||(18178683-18178810)
chr7 (48-215)||(11305431-11305598)
chr7 (48-215)||(13967836-13968003)
chr7 (48-215)||(49153215-49153382)
chr7 (60-187)||(11552304-11552431)
chr7 (135-187)||(12688442-12688494)
chr7 (150-226)||(14212576-14212652)
chr7 (60-187)||(8199569-8199696)
chr7 (60-187)||(8708546-8708673)
chr7 (60-187)||(10871936-10872063)
chr7 (60-187)||(23202815-23202942)
chr7 (60-187)||(23508942-23509069)
chr7 (60-187)||(44790553-44790680)
chr7 (69-187)||(13687005-13687123)
chr7 (150-187)||(14333337-14333374)
chr7 (150-187)||(18551050-18551087)
chr7 (60-187)||(11236415-11236542)
chr7 (60-187)||(14955499-14955622)
chr7 (126-215)||(8211374-8211463)
chr7 (1-181)||(16461-16641)
[»] chr2 (41 HSPs)
chr2 (1-235)||(27364753-27364987)
chr2 (3-228)||(23277318-23277543)
chr2 (51-235)||(19651776-19651960)
chr2 (3-232)||(23294473-23294702)
chr2 (51-235)||(27788276-27788460)
chr2 (1-227)||(27209846-27210072)
chr2 (3-215)||(23111290-23111503)
chr2 (51-232)||(24949127-24949309)
chr2 (1-106)||(23099692-23099797)
chr2 (48-215)||(20828814-20828981)
chr2 (48-215)||(20833540-20833707)
chr2 (48-215)||(31831213-31831380)
chr2 (1-235)||(21324940-21325174)
chr2 (51-235)||(12574888-12575072)
chr2 (60-235)||(24876482-24876657)
chr2 (48-215)||(1064306-1064473)
chr2 (1-187)||(24676072-24676258)
chr2 (26-215)||(21890417-21890606)
chr2 (1-187)||(22756139-22756325)
chr2 (3-215)||(24819362-24819574)
chr2 (60-187)||(21144774-21144901)
chr2 (60-235)||(27371804-27371979)
chr2 (60-215)||(23066946-23067101)
chr2 (60-187)||(9610719-9610846)
chr2 (135-187)||(10869433-10869485)
chr2 (60-187)||(16923472-16923599)
chr2 (60-187)||(16925943-16926070)
chr2 (60-187)||(16982735-16982862)
chr2 (60-187)||(16999583-16999710)
chr2 (60-187)||(17064300-17064427)
chr2 (60-187)||(17067958-17068085)
chr2 (60-187)||(27218599-27218726)
chr2 (69-187)||(24710617-24710735)
chr2 (69-187)||(41608127-41608245)
chr2 (150-187)||(24262953-24262990)
chr2 (150-187)||(44385392-44385429)
chr2 (135-215)||(45530066-45530146)
chr2 (141-215)||(11357688-11357762)
chr2 (135-209)||(30210725-30210799)
chr2 (150-187)||(22324679-22324716)
chr2 (22-187)||(24707177-24707342)
[»] chr3 (60 HSPs)
chr3 (4-235)||(13971485-13971716)
chr3 (1-235)||(14087206-14087440)
chr3 (1-215)||(14574476-14574690)
chr3 (51-215)||(16380340-16380504)
chr3 (6-232)||(13319869-13320095)
chr3 (3-232)||(18133710-18133939)
chr3 (1-215)||(10419407-10419621)
chr3 (51-235)||(4678971-4679155)
chr3 (51-235)||(41178055-41178239)
chr3 (1-232)||(17493166-17493397)
chr3 (51-232)||(31939439-31939620)
chr3 (51-235)||(8758494-8758678)
chr3 (3-235)||(15228182-15228414)
chr3 (54-215)||(11303188-11303349)
chr3 (51-232)||(31694598-31694779)
chr3 (51-235)||(44777780-44777964)
chr3 (6-181)||(13299889-13300064)
chr3 (6-181)||(13310547-13310722)
chr3 (51-236)||(16835922-16836107)
chr3 (85-235)||(15248670-15248820)
chr3 (48-215)||(47124497-47124664)
chr3 (126-232)||(12360029-12360135)
chr3 (1-235)||(16827565-16827799)
chr3 (55-235)||(13942557-13942737)
chr3 (48-215)||(10384521-10384688)
chr3 (48-215)||(28754871-28755038)
chr3 (85-235)||(15209414-15209564)
chr3 (48-190)||(16329069-16329211)
chr3 (66-235)||(16692687-16692856)
chr3 (3-157)||(15234128-15234282)
chr3 (54-215)||(11960584-11960745)
chr3 (54-215)||(16337927-16338088)
chr3 (3-106)||(12359891-12359994)
chr3 (26-187)||(16371983-16372144)
chr3 (60-235)||(16411714-16411889)
chr3 (69-235)||(15347686-15347852)
chr3 (58-187)||(10906781-10906910)
chr3 (1-187)||(12498819-12499005)
chr3 (69-215)||(17490393-17490539)
chr3 (66-235)||(16806364-16806533)
chr3 (60-187)||(5424362-5424489)
chr3 (72-187)||(6601307-6601422)
chr3 (60-187)||(15588824-15588951)
chr3 (60-187)||(16636344-16636471)
chr3 (72-187)||(16756029-16756144)
chr3 (60-187)||(26791831-26791958)
chr3 (60-187)||(43163668-43163795)
chr3 (60-187)||(48426018-48426145)
chr3 (1-215)||(14580315-14580529)
chr3 (150-187)||(10006171-10006208)
chr3 (150-187)||(15724456-15724493)
chr3 (150-187)||(20061576-20061613)
chr3 (60-187)||(13253261-13253388)
chr3 (27-187)||(14875898-14876057)
chr3 (135-187)||(15062315-15062367)
chr3 (60-187)||(15339840-15339967)
chr3 (72-187)||(53384462-53384577)
chr3 (58-187)||(15401947-15402076)
chr3 (150-187)||(16491703-16491740)
chr3 (127-215)||(15015255-15015343)
[»] chr5 (48 HSPs)
chr5 (1-235)||(21680094-21680328)
chr5 (3-232)||(24619613-24619842)
chr5 (3-232)||(24715844-24716073)
chr5 (3-232)||(24748872-24749101)
chr5 (1-215)||(21890075-21890289)
chr5 (26-235)||(21831102-21831311)
chr5 (3-227)||(22462778-22463001)
chr5 (51-236)||(17268700-17268885)
chr5 (26-235)||(21496891-21497100)
chr5 (3-232)||(22235238-22235467)
chr5 (26-215)||(20822291-20822480)
chr5 (3-215)||(21563291-21563503)
chr5 (3-227)||(20774585-20774809)
chr5 (48-215)||(24797760-24797927)
chr5 (48-227)||(28894305-28894484)
chr5 (48-227)||(28915776-28915955)
chr5 (48-227)||(28923131-28923310)
chr5 (48-215)||(37542744-37542911)
chr5 (3-235)||(26738045-26738277)
chr5 (51-215)||(23079455-23079619)
chr5 (48-215)||(20343120-20343287)
chr5 (1-235)||(18776606-18776840)
chr5 (48-215)||(14886354-14886521)
chr5 (48-215)||(25848913-25849080)
chr5 (1-187)||(23441094-23441280)
chr5 (3-215)||(20467415-20467627)
chr5 (1-187)||(20800332-20800518)
chr5 (1-187)||(23517410-23517596)
chr5 (60-187)||(16357386-16357513)
chr5 (75-235)||(21338687-21338847)
chr5 (135-187)||(22349307-22349359)
chr5 (60-187)||(27519291-27519418)
chr5 (60-187)||(29475448-29475575)
chr5 (60-187)||(34567378-34567505)
chr5 (60-235)||(40709616-40709791)
chr5 (60-187)||(41771726-41771853)
chr5 (69-187)||(19770844-19770962)
chr5 (1-187)||(22135552-22135738)
chr5 (48-199)||(22503533-22503684)
chr5 (69-187)||(27611238-27611356)
chr5 (70-187)||(14999124-14999241)
chr5 (150-187)||(27684865-27684902)
chr5 (60-187)||(22332262-22332389)
chr5 (150-187)||(23574621-23574658)
chr5 (1-106)||(23574694-23574799)
chr5 (70-215)||(25424045-25424189)
chr5 (150-187)||(37290961-37290998)
chr5 (72-187)||(27667877-27667992)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-235)||(113494-113728)
scaffold0029 (1-227)||(95139-95365)
scaffold0029 (60-187)||(109007-109134)
[»] scaffold0028 (5 HSPs)
scaffold0028 (1-235)||(49651-49885)
scaffold0028 (60-187)||(9457-9584)
scaffold0028 (60-187)||(15919-16046)
scaffold0028 (127-214)||(879-966)
scaffold0028 (135-235)||(44089-44189)
[»] scaffold0090 (2 HSPs)
scaffold0090 (1-215)||(19804-20018)
scaffold0090 (1-215)||(23966-24180)
[»] scaffold0068 (1 HSPs)
scaffold0068 (80-235)||(34123-34278)
[»] chr8 (44 HSPs)
chr8 (1-235)||(19852381-19852615)
chr8 (1-235)||(19858417-19858651)
chr8 (48-232)||(1267211-1267395)
chr8 (3-235)||(31416053-31416285)
chr8 (1-235)||(21841387-21841621)
chr8 (1-232)||(23655900-23656131)
chr8 (51-236)||(22051832-22052017)
chr8 (51-232)||(20975278-20975459)
chr8 (1-224)||(20985124-20985347)
chr8 (26-235)||(20389069-20389278)
chr8 (1-187)||(20009497-20009683)
chr8 (51-235)||(31570469-31570653)
chr8 (5-199)||(22371946-22372140)
chr8 (48-226)||(803297-803475)
chr8 (3-235)||(22247996-22248228)
chr8 (48-215)||(16270848-16271015)
chr8 (72-215)||(23949909-23950052)
chr8 (48-215)||(12305748-12305915)
chr8 (3-233)||(22988168-22988398)
chr8 (54-215)||(27355538-27355698)
chr8 (85-235)||(20395793-20395943)
chr8 (72-215)||(22377102-22377245)
chr8 (72-215)||(22383277-22383420)
chr8 (1-187)||(19978985-19979171)
chr8 (54-215)||(29303056-29303217)
chr8 (1-226)||(30312721-30312946)
chr8 (135-235)||(21921447-21921547)
chr8 (48-215)||(6604648-6604815)
chr8 (48-215)||(6680101-6680268)
chr8 (1-187)||(16407622-16407808)
chr8 (1-187)||(21166115-21166301)
chr8 (1-193)||(32601156-32601348)
chr8 (48-215)||(14566132-14566299)
chr8 (69-235)||(17673668-17673834)
chr8 (3-235)||(19483643-19483875)
chr8 (150-235)||(22132767-22132852)
chr8 (150-235)||(23651011-23651096)
chr8 (60-187)||(18857595-18857722)
chr8 (150-193)||(15534395-15534438)
chr8 (69-187)||(19113708-19113826)
chr8 (128-215)||(25283120-25283207)
chr8 (60-235)||(22040829-22041004)
chr8 (128-215)||(25283346-25283433)
chr8 (150-215)||(21043435-21043500)
[»] scaffold0476 (1 HSPs)
scaffold0476 (51-235)||(2517-2701)
[»] scaffold0523 (1 HSPs)
scaffold0523 (1-235)||(804-1038)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-215)||(27479-27693)
[»] scaffold0034 (3 HSPs)
scaffold0034 (51-235)||(13088-13272)
scaffold0034 (3-236)||(68304-68537)
scaffold0034 (54-232)||(4143-4321)
[»] scaffold0053 (2 HSPs)
scaffold0053 (1-215)||(48171-48385)
scaffold0053 (51-236)||(57034-57219)
[»] chr4 (36 HSPs)
chr4 (6-236)||(1648416-1648646)
chr4 (1-235)||(15002498-15002732)
chr4 (3-236)||(27901289-27901522)
chr4 (3-235)||(8706822-8707054)
chr4 (1-235)||(15078539-15078773)
chr4 (1-215)||(15246848-15247062)
chr4 (54-235)||(15358307-15358488)
chr4 (3-215)||(15414162-15414374)
chr4 (28-235)||(15320054-15320261)
chr4 (60-232)||(16148618-16148790)
chr4 (60-232)||(16152764-16152936)
chr4 (51-215)||(33223847-33224011)
chr4 (48-215)||(3263975-3264142)
chr4 (57-235)||(14160374-14160552)
chr4 (48-226)||(29452718-29452896)
chr4 (48-215)||(44661047-44661214)
chr4 (26-187)||(14695065-14695226)
chr4 (54-215)||(14850293-14850454)
chr4 (48-215)||(11206412-11206579)
chr4 (48-215)||(20891906-20892073)
chr4 (62-235)||(1639360-1639533)
chr4 (1-187)||(15146759-15146945)
chr4 (135-235)||(12524580-12524680)
chr4 (60-187)||(14681519-14681646)
chr4 (60-235)||(19777726-19777901)
chr4 (1-187)||(18226320-18226506)
chr4 (150-235)||(14303001-14303086)
chr4 (150-235)||(23956651-23956736)
chr4 (60-187)||(8387364-8387491)
chr4 (60-187)||(12477552-12477679)
chr4 (60-187)||(29038337-29038464)
chr4 (69-187)||(27712288-27712406)
chr4 (150-187)||(8052646-8052683)
chr4 (150-187)||(16354468-16354505)
chr4 (150-235)||(18298109-18298194)
chr4 (3-187)||(40473992-40474176)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-215)||(89582-89796)
scaffold0001 (1-215)||(90260-90474)
scaffold0001 (153-235)||(390489-390571)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-178)||(48096-48273)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-235)||(3726-3960)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-235)||(5365-5599)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-235)||(28992-29226)
scaffold0026 (70-193)||(29922-30045)
[»] scaffold0751 (1 HSPs)
scaffold0751 (2-235)||(3111-3344)
[»] scaffold0298 (3 HSPs)
scaffold0298 (3-236)||(11196-11429)
scaffold0298 (3-236)||(14966-15199)
scaffold0298 (1-235)||(20918-21152)
[»] scaffold0234 (1 HSPs)
scaffold0234 (3-215)||(24211-24423)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-153)||(6822-6974)
[»] scaffold2094 (1 HSPs)
scaffold2094 (5-232)||(203-430)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-235)||(32345-32580)
[»] scaffold0682 (1 HSPs)
scaffold0682 (1-227)||(826-1052)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-235)||(1110-1343)
[»] scaffold0239 (1 HSPs)
scaffold0239 (51-236)||(11973-12158)
[»] scaffold0222 (2 HSPs)
scaffold0222 (3-236)||(2494-2727)
scaffold0222 (51-232)||(7998-8179)
[»] scaffold0156 (1 HSPs)
scaffold0156 (54-235)||(28160-28341)
[»] scaffold0011 (3 HSPs)
scaffold0011 (3-232)||(194843-195072)
scaffold0011 (1-235)||(149505-149739)
scaffold0011 (3-215)||(25672-25884)
[»] chr1 (29 HSPs)
chr1 (51-235)||(24098859-24099043)
chr1 (54-236)||(19662396-19662578)
chr1 (51-232)||(20939319-20939500)
chr1 (48-215)||(20856013-20856180)
chr1 (60-235)||(50619509-50619684)
chr1 (54-215)||(19855244-19855405)
chr1 (138-235)||(20835231-20835328)
chr1 (26-215)||(22109961-22110150)
chr1 (26-215)||(22113810-22113999)
chr1 (48-215)||(20295351-20295518)
chr1 (60-235)||(19107287-19107462)
chr1 (3-232)||(16373451-16373680)
chr1 (54-235)||(19760132-19760313)
chr1 (3-157)||(23197454-23197608)
chr1 (48-215)||(31539250-31539417)
chr1 (150-235)||(20139749-20139834)
chr1 (48-215)||(37678019-37678186)
chr1 (3-103)||(20835108-20835208)
chr1 (69-235)||(33390303-33390469)
chr1 (3-235)||(41352870-41353102)
chr1 (1-193)||(16077862-16078054)
chr1 (150-226)||(17044370-17044446)
chr1 (111-235)||(21749860-21749984)
chr1 (60-235)||(51332758-51332933)
chr1 (69-187)||(21837917-21838035)
chr1 (1-187)||(21025140-21025326)
chr1 (150-187)||(16349954-16349991)
chr1 (60-215)||(20250740-20250895)
chr1 (48-215)||(21951848-21952015)
[»] scaffold0304 (1 HSPs)
scaffold0304 (1-215)||(2622-2836)
[»] scaffold0244 (1 HSPs)
scaffold0244 (1-187)||(18332-18518)
[»] scaffold0004 (2 HSPs)
scaffold0004 (51-232)||(323642-323823)
scaffold0004 (30-215)||(202634-202819)
[»] scaffold2112 (1 HSPs)
scaffold2112 (1-147)||(1-147)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-235)||(5685-5919)
[»] scaffold0071 (1 HSPs)
scaffold0071 (54-232)||(48396-48574)
[»] scaffold1061 (1 HSPs)
scaffold1061 (54-235)||(2523-2704)
[»] scaffold0126 (1 HSPs)
scaffold0126 (51-232)||(41855-42036)
[»] scaffold0067 (4 HSPs)
scaffold0067 (51-232)||(51367-51548)
scaffold0067 (51-232)||(60401-60582)
scaffold0067 (51-232)||(66789-66970)
scaffold0067 (76-178)||(26392-26494)
[»] scaffold0035 (1 HSPs)
scaffold0035 (54-235)||(3686-3867)
[»] scaffold0309 (1 HSPs)
scaffold0309 (3-215)||(10748-10960)
[»] scaffold0261 (2 HSPs)
scaffold0261 (7-235)||(14340-14568)
scaffold0261 (7-235)||(22519-22747)
[»] scaffold0232 (1 HSPs)
scaffold0232 (1-235)||(823-1057)
[»] scaffold0742 (1 HSPs)
scaffold0742 (51-236)||(6147-6332)
[»] scaffold0465 (1 HSPs)
scaffold0465 (3-227)||(372-597)
[»] scaffold0101 (1 HSPs)
scaffold0101 (51-232)||(4639-4820)
[»] scaffold0058 (1 HSPs)
scaffold0058 (51-232)||(20058-20239)
[»] scaffold0010 (3 HSPs)
scaffold0010 (3-232)||(46538-46767)
scaffold0010 (48-215)||(41517-41684)
scaffold0010 (26-215)||(2869-3058)
[»] scaffold0009 (1 HSPs)
scaffold0009 (51-232)||(249551-249732)
[»] scaffold0005 (2 HSPs)
scaffold0005 (51-232)||(261246-261427)
scaffold0005 (26-187)||(277992-278153)
[»] scaffold0114 (3 HSPs)
scaffold0114 (51-235)||(20835-21019)
scaffold0114 (51-215)||(45472-45636)
scaffold0114 (155-215)||(19632-19692)
[»] scaffold0600 (1 HSPs)
scaffold0600 (1-215)||(4731-4945)
[»] scaffold0367 (1 HSPs)
scaffold0367 (51-232)||(6425-6606)
[»] scaffold0077 (1 HSPs)
scaffold0077 (54-235)||(20631-20812)
[»] scaffold1646 (1 HSPs)
scaffold1646 (51-215)||(279-443)
[»] scaffold0020 (2 HSPs)
scaffold0020 (69-235)||(100754-100923)
scaffold0020 (29-187)||(181182-181340)
[»] scaffold0213 (1 HSPs)
scaffold0213 (75-215)||(5547-5686)
[»] scaffold0130 (1 HSPs)
scaffold0130 (3-235)||(9947-10179)
[»] scaffold0124 (1 HSPs)
scaffold0124 (54-236)||(13132-13316)
[»] scaffold0037 (1 HSPs)
scaffold0037 (85-235)||(116126-116276)
[»] scaffold0139 (3 HSPs)
scaffold0139 (1-187)||(286-472)
scaffold0139 (69-214)||(28173-28318)
scaffold0139 (69-214)||(34426-34571)
[»] scaffold0012 (2 HSPs)
scaffold0012 (26-235)||(229978-230187)
scaffold0012 (73-235)||(218626-218788)
[»] scaffold0203 (1 HSPs)
scaffold0203 (3-232)||(13438-13667)
[»] scaffold1288 (1 HSPs)
scaffold1288 (1-169)||(1991-2159)
[»] scaffold0235 (2 HSPs)
scaffold0235 (54-232)||(10647-10825)
scaffold0235 (54-232)||(20861-21039)
[»] scaffold0180 (1 HSPs)
scaffold0180 (26-235)||(31915-32124)
[»] scaffold0331 (1 HSPs)
scaffold0331 (3-235)||(17116-17348)
[»] scaffold0113 (1 HSPs)
scaffold0113 (78-235)||(25079-25236)
[»] scaffold0049 (1 HSPs)
scaffold0049 (26-235)||(51025-51234)
[»] scaffold1830 (1 HSPs)
scaffold1830 (54-170)||(1-117)
[»] scaffold0060 (1 HSPs)
scaffold0060 (51-215)||(43738-43902)
[»] scaffold1602 (1 HSPs)
scaffold1602 (60-235)||(1263-1438)
[»] scaffold0518 (1 HSPs)
scaffold0518 (3-213)||(11690-11900)
[»] scaffold0120 (3 HSPs)
scaffold0120 (54-187)||(742-874)
scaffold0120 (71-193)||(6997-7119)
scaffold0120 (3-187)||(13041-13225)
[»] scaffold0089 (2 HSPs)
scaffold0089 (48-215)||(15897-16064)
scaffold0089 (3-106)||(10501-10604)
[»] scaffold0006 (1 HSPs)
scaffold0006 (60-215)||(102188-102343)
[»] scaffold1710 (1 HSPs)
scaffold1710 (138-232)||(802-896)
[»] scaffold0411 (1 HSPs)
scaffold0411 (54-215)||(14269-14430)
[»] scaffold0056 (1 HSPs)
scaffold0056 (26-187)||(4515-4676)
[»] scaffold0046 (1 HSPs)
scaffold0046 (51-212)||(81019-81180)
[»] scaffold0865 (1 HSPs)
scaffold0865 (1-97)||(3409-3505)
[»] scaffold0359 (1 HSPs)
scaffold0359 (3-215)||(17636-17848)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-97)||(30422-30518)
[»] scaffold0104 (2 HSPs)
scaffold0104 (51-235)||(20329-20513)
scaffold0104 (51-235)||(23149-23333)
[»] scaffold0040 (2 HSPs)
scaffold0040 (51-215)||(15832-15996)
scaffold0040 (26-235)||(112650-112859)
[»] scaffold0243 (1 HSPs)
scaffold0243 (60-235)||(26140-26315)
[»] scaffold0507 (1 HSPs)
scaffold0507 (54-215)||(9925-10086)
[»] scaffold0042 (2 HSPs)
scaffold0042 (57-235)||(66340-66518)
scaffold0042 (26-187)||(38982-39143)
[»] scaffold0017 (3 HSPs)
scaffold0017 (1-235)||(56952-57186)
scaffold0017 (26-187)||(19229-19390)
scaffold0017 (1-187)||(196615-196801)
[»] scaffold0647 (1 HSPs)
scaffold0647 (3-215)||(1863-2075)
[»] scaffold0190 (1 HSPs)
scaffold0190 (51-232)||(32506-32687)
[»] scaffold0064 (1 HSPs)
scaffold0064 (26-215)||(39921-40110)
[»] scaffold0708 (1 HSPs)
scaffold0708 (51-215)||(7332-7496)
[»] scaffold0431 (1 HSPs)
scaffold0431 (60-187)||(8349-8476)
[»] scaffold0138 (1 HSPs)
scaffold0138 (60-235)||(8283-8458)
[»] scaffold0084 (1 HSPs)
scaffold0084 (69-193)||(6198-6322)
[»] scaffold0333 (1 HSPs)
scaffold0333 (60-235)||(16590-16764)
[»] scaffold0585 (2 HSPs)
scaffold0585 (2-88)||(6229-6315)
scaffold0585 (150-235)||(6322-6407)
[»] scaffold0396 (1 HSPs)
scaffold0396 (27-215)||(4986-5174)
[»] scaffold0149 (2 HSPs)
scaffold0149 (138-235)||(6510-6607)
scaffold0149 (138-235)||(10941-11038)
[»] scaffold0093 (1 HSPs)
scaffold0093 (54-215)||(27216-27377)
[»] scaffold0083 (1 HSPs)
scaffold0083 (88-209)||(10240-10361)
[»] scaffold0270 (2 HSPs)
scaffold0270 (72-235)||(4806-4969)
scaffold0270 (72-235)||(11936-12099)
[»] scaffold0102 (1 HSPs)
scaffold0102 (135-235)||(40673-40773)
[»] scaffold0081 (3 HSPs)
scaffold0081 (58-190)||(50412-50544)
scaffold0081 (26-187)||(19585-19746)
scaffold0081 (26-187)||(35009-35170)
[»] scaffold0293 (1 HSPs)
scaffold0293 (60-235)||(13403-13578)
[»] scaffold0074 (1 HSPs)
scaffold0074 (57-235)||(4075-4253)
[»] scaffold0676 (1 HSPs)
scaffold0676 (1-187)||(6997-7183)
[»] scaffold0342 (1 HSPs)
scaffold0342 (89-215)||(18440-18566)
[»] scaffold0023 (3 HSPs)
scaffold0023 (69-235)||(3662-3828)
scaffold0023 (150-187)||(28658-28695)
scaffold0023 (127-187)||(59738-59798)
[»] scaffold0109 (2 HSPs)
scaffold0109 (66-235)||(32775-32944)
scaffold0109 (66-235)||(9531-9700)
[»] scaffold0018 (2 HSPs)
scaffold0018 (3-215)||(11336-11548)
scaffold0018 (3-215)||(17528-17740)
[»] scaffold0379 (1 HSPs)
scaffold0379 (135-215)||(7162-7242)
[»] scaffold0228 (1 HSPs)
scaffold0228 (71-215)||(651-795)
[»] scaffold0348 (1 HSPs)
scaffold0348 (156-227)||(7127-7198)
[»] scaffold1355 (1 HSPs)
scaffold1355 (150-235)||(1611-1696)
[»] scaffold0894 (1 HSPs)
scaffold0894 (150-235)||(3309-3394)
[»] scaffold0546 (1 HSPs)
scaffold0546 (66-235)||(3607-3776)
[»] scaffold0284 (1 HSPs)
scaffold0284 (150-235)||(22802-22887)
[»] scaffold0091 (1 HSPs)
scaffold0091 (150-187)||(8773-8810)
[»] scaffold0031 (1 HSPs)
scaffold0031 (64-193)||(63231-63360)
[»] scaffold0730 (1 HSPs)
scaffold0730 (127-215)||(4855-4943)
[»] scaffold0719 (1 HSPs)
scaffold0719 (72-187)||(142-257)
[»] scaffold0501 (1 HSPs)
scaffold0501 (27-187)||(3177-3337)
[»] scaffold0413 (1 HSPs)
scaffold0413 (150-214)||(1849-1913)
[»] scaffold0375 (1 HSPs)
scaffold0375 (1-187)||(2951-3137)
[»] scaffold0459 (1 HSPs)
scaffold0459 (150-187)||(1397-1434)
[»] scaffold0358 (1 HSPs)
scaffold0358 (150-215)||(7004-7069)
[»] scaffold0220 (1 HSPs)
scaffold0220 (69-186)||(28-145)
[»] scaffold0088 (1 HSPs)
scaffold0088 (48-177)||(27926-28055)
[»] scaffold0079 (1 HSPs)
scaffold0079 (150-187)||(25957-25994)
[»] scaffold0100 (1 HSPs)
scaffold0100 (151-235)||(25006-25090)
[»] scaffold0324 (2 HSPs)
scaffold0324 (60-215)||(14407-14562)
scaffold0324 (60-215)||(19198-19353)
[»] scaffold0160 (1 HSPs)
scaffold0160 (128-215)||(8220-8307)
[»] scaffold0080 (1 HSPs)
scaffold0080 (150-193)||(8374-8417)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-187)||(79631-79817)
[»] scaffold1715 (1 HSPs)
scaffold1715 (56-109)||(19-72)
[»] scaffold0540 (1 HSPs)
scaffold0540 (150-215)||(7617-7682)
[»] scaffold0218 (1 HSPs)
scaffold0218 (127-215)||(3207-3295)


Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 34644865 - 34645099
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34644865 tcaagtttgtggatttaatgattgatagcaatcaaactgaagatggtgatttcaaggttgatgaacacggtgtgttgagattcagaggcagaatttgcat 34644964  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34644965 tcctgataacgatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 34645064  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||||||||||||||||||||||    
T  34645065 aagctgttttggtgggttggtttgaagcgtgatgt 34645099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19880300 - 19880066
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||| ||||||||| ||||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||    
T  19880300 tcaagtttgtggatttaatggttgatagtaatcagactgaagatagtgatttcaaagttgatgaacaaggtgtgttgaggttcagaggcagaatttgtat 19880201  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19880200 tcctaacaacgatgagatgaaaaggttgattttggaagaaagccacaagagtagcttgagtatccatccgggagctacgaagatgtatcacgacttgaaa 19880101  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||| ||||  ||||||||||||||||||    
T  19880100 aagctgttttagtggtctggtttgaagcgtgatgt 19880066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18795692 - 18795458
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||  |||||||||| |||||| | | |||||||| ||||||||||| |||||||||||||||||||| |||||||| ||    
T  18795692 tcaagtttgtggatttaatgttttatagtaatcaatctgaagatagtgatttcaaagttgatgaacaaggtgtgttgaggttcagaggtagaatttgtat 18795593  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||| |||||  ||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  18795592 tccggacaatgatgagttgaaaaagttgatcttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtatcatgatttgaaa 18795493  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||   |||||||||||||||||    
T  18795492 aagctgttttggtggtccggtttgaagcgtgatgt 18795458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 25769193 - 25768959
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||| ||||||||||| ||||| ||| || |||||||||||||| || |||||||||||||| ||||| |||||||| ||    
T  25769193 tcaagtttgtggatttaatggttgctagtaatcaaaatgaagatggtgacttcaaggttgatgatcagggtgtgttgaggtttagaggaagaatttgtat 25769094  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| |   ||||| ||||||  ||||||||||||||||||||||  |||||||| ||||| |||||||||||||| ||||||||||| || || ||     
T  25769093 tcctgatagtgatgagttgaaaaagttgattttggaagaaagtcacagaagtagcttaagtattcatccgggagctacaaagatgtaccatgattttaag 25768994  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||   |||||||||||||||||    
T  25768993 aaattgttttggtggtccggtttgaagcgtgatgt 25768959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 19435954 - 19435770
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||| ||||| || ||||||||||| |||||||| |||||||| |||||||||||  ||||| ||||||  |||||||| ||| ||||||||||||    
T  19435954 ttcaaggtggatgatcagggtgtgttgagattcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaataaagtcacaaga 19435855  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||| |||||||||||||| |||||||| || || ||||| || ||||||||||||   |||||||||||||||||    
T  19435854 gtagcttgagtattcatccgggagctacaaagatgtatcatgatttgaagaaactgttttggtggtccggtttgaagcgtgatgt 19435770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21472603 - 21472389
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| | | || |||||||||||||| || || ||||||||||||||||| | |||||||||    
T  21472603 tcaagtttgtggatttgatggttgctagtaatcaaactgaagatagtgacttcaaggttgatgatcagggcgtgttgaggttcagaggaataatttgcat 21472504  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| |   ||||| ||||||  |||||||| |||||||||||||  || ||||| ||||| || ||||||||||| ||||||||||| || |||||     
T  21472503 tcctgatagtgatgagttgaaaaagttgattttagaagaaagtcacagaagcagcttaagtattcacccgggagctacaaagatgtaccatgatttgaag 21472404  T
Q  201 aagctgttttggtgg 215  Q
    ||  |||||||||||    
T  21472403 aaattgttttggtgg 21472389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 19488553 - 19488765
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||||||||||| ||| || ||| |||||||||| || ||||||||||| ||| ||||||||||| | ||||    
T  19488553 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttccaggttgatgatcaaggtgtgttgagattccgaggcagaattcgtattc 19488652  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| |||||||||||||| |||||||| || |||||||| ||    
T  19488653 ctgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatccgggagctacaaagatgtatcatgacttgaagaa 19488752  T
Q  203 gctgttttggtgg 215  Q
      |||||||||||    
T  19488753 attgttttggtgg 19488765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 15460338 - 15460124
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||| |||||||||| |||| | ||| |||||||| ||||||||||| ||||| ||||| || |||||||||||||| ||    
T  15460338 tcaagtttgtggatttaatggttgatagtaatcaagctgaggatggtgatttcaaagttgatgaacaaggtgtattgagatttagaggcagaatttgtat 15460239  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||| |||||  | ||  |||| |  |||||||| ||||||||||| ||||| |  |||||||| ||||| ||||||||||| ||||| || ||||||||     
T  15460238 tcccgacaatgaagaattgaagaagttgattttagaagaaagtcataagagcaatttgagtattcatccaggagctacgaaaatgtatcatgacttgaag 15460139  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  15460138 aagttgttttggtgg 15460124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 232
Target Start/End: Complemental strand, 19454369 - 19454191
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||  |  | ||| |||||| ||||||||| || ||||||||||||||||    
T  19454369 aaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattcctgatgatgacgagttgaaaaaattgattttcgaggaaagtcacaagagta 19454270  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
     ||| ||||| ||||||||||||||||| ||||| || || ||||| |||||||||||||||   ||||||||||||||    
T  19454269 acttaagtattcatccgggagctacgaaaatgtaacatgatttgaagaagctgttttggtggtccggtttgaagcgtga 19454191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 14380796 - 14380980
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||| ||| ||||| || ||||| |||||||||||||| |||||||| |||| ||||||  ||||| ||||||  || ||||| || |||||||||||||    
T  14380796 ttcatggtggatgatcagggtgtattgaggttcagaggaagaatttgtattcgtgacaatgatgagttgaaaaagttaattttagaggaaagtcacaaga 14380895  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||| | |||||||||||||| ||||||||||| || ||||| || ||||||||||||   |||||||||||||||||    
T  14380896 gtagcttgagtgttcatccgggagctacaaagatgtaccatgatttgaagaaactgttttggtggtccggtttgaagcgtgatgt 14380980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 21563411 - 21563645
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||| || || ||  |||||||||| |||| | | | |||||||||||||||||||| || |||||||| || |||||||||||||| ||    
T  21563411 tcaagtttgtggatatattggttactagtaatcaagctgaggctagtgatttcaaggttgatgaacaaggcgtgttgagatttagaggcagaatttgtat 21563510  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||| |||||   || ||||| || ||||| |||| ||||| ||| || |||||||||||||||||||||||||| || ||||||||     
T  21563511 tcctgataatgatgagttgaaacagttaattttagaggaaagccacaggagtaacttaagcatccatccgggagctacgaagatgtatcatgacttgaag 21563610  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |   |||||||||||   |||||||||||||||||    
T  21563611 agattgttttggtggtccggtttgaagcgtgatgt 21563645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 21569270 - 21569504
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||| || || ||  |||||||||| |||| | | | |||||||||||||||||||| || |||||||| || |||||||||||||| ||    
T  21569270 tcaagtttgtggatgtattggttactagtaatcaagctgaggctagtgatttcaaggttgatgaacaaggcgtgttgagatttagaggcagaatttgtat 21569369  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||| |||||   || ||||| || ||||| |||| ||||| ||| || |||||||||||||||||||||||||| || ||||||||     
T  21569370 tcctgataatgatgagttgaaacagttaattttagaggaaagccacaggagtaacttaagcatccatccgggagctacgaagatgtatcatgacttgaag 21569469  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |   |||||||||||   |||||||||||||||||    
T  21569470 agattgttttggtggtccggtttgaagcgtgatgt 21569504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 8762262 - 8762443
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  |||||||| ||| |||||||||| |    
T  8762262 ttcaaggttgatgatcagggtgtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattttagaataaagtcacaaaa 8762361  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| || ||||||||||| || |||||||| || ||||| |||||||||||||||   ||||||||||||||    
T  8762362 gtagcttgagtattcacccgggagctacaaaaatgtaccatgatttgaagaagctgttttggtggtccggtttgaagcgtga 8762443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 28282142 - 28282326
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||| ||||    
T  28282142 ttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 28282241  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| |||||    
T  28282242 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 28282326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 5296535 - 5296716
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  |||||||| ||||||||| ||||||    
T  5296535 ttcaaggttgatgatcagggtgtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattttagaagaaagttacaaga 5296634  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||   |||||||| |||||    
T  5296635 gtagcttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaactgttttggtggtccggtttgaaacgtga 5296716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 10468178 - 10468362
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||| |||||||| || ||||| |||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | ||||| ||||||||||    
T  10468178 ttcaaagttgatgatcagggtgttttgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattctagaagagagtcacaaga 10468277  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| |||||||| || ||||| ||||| ||||||||||| || ||||| || ||||||||||||   |||||||||| ||||||    
T  10468278 gtaggttgagtattcacccgggggctacaaagatgtaccatgatttgaagaaactgttttggtggtccggtttgaagcatgatgt 10468362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 14379246 - 14379380
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||| ||| ||||| || ||||| |||||||||||||| |||||||| |||| ||||||  ||||| ||||||  || ||||| || |||||||||||||    
T  14379246 ttcatggtggatgatcagggtgtattgaggttcagaggaagaatttgtattcgtgacaatgatgagttgaaaaagttaattttagaggaaagtcacaaga 14379345  T
Q  151 gtagcttgagtatccatccgggagctacgaagatg 185  Q
    ||||||||||| | |||||||||||||| ||||||    
T  14379346 gtagcttgagtgttcatccgggagctacaaagatg 14379380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 235
Target Start/End: Complemental strand, 23079467 - 23079237
Alignment:
Q  5 gtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcct 104  Q
    |||||| |||||  || ||| ||||||||| ||||||| | | ||||| ||  | ||||| || || |||||||| ||| |||| |||||||  ||||||    
T  23079467 gtttgtagatttgttggttgctagtaatcagactgaagatagtgattttaaaatcgatgatcaaggagtgttgagattccgagggagaatttctattcct 23079368  T
Q  105 gacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaag 203  Q
    ||| |  |||||||||| ||||| |||| | ||||| ||||| |  |||||||||||||||||||||||||||||||| ||||| || ||  ||||||||    
T  23079367 gacgatgatgagatgaagaagat-gattcttgaagagagtcatagaagtagcttgagtatccatccgggagctacgaaaatgtatcatgatctgaaaaag 23079269  T
Q  204 ctgttttggtgggttggtttgaagcgtgatgt 235  Q
     |||||||||||  ||| ||||| ||||||||    
T  23079268 ttgttttggtggtctgggttgaaacgtgatgt 23079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 18197057 - 18197218
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagt 152  Q
    ||||| ||||| || ||||||||||| ||  |||| |||||||| ||||| ||| || |||||||||| |||| ||||| | ||||| |||||||  |||    
T  18197057 aaggtcgatgatcaaggtgtgttgagatttcgaggtagaatttgtattccagacgacgatgagatgaagaaga-tgattcttgaagagagtcacagaagt 18197155  T
Q  153 agcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||| |||||||||||||| |||||||| || || ||||||||  |||||||||||    
T  18197156 agcttgagtattcatccgggagctaccaagatgtatcatgatttgaaaaatttgttttggtgg 18197218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5838498 - 5838732
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||||||||||||||  |  | | ||||||||| ||||||| ||| ||||| ||||| ||||| || |||||||| || |||  |||   |||||| ||    
T  5838498 tcaagtttgtggatttgttagtcgctagtaatcagactgaagatggtgattttaaggtcgatgaccatggtgtgttaagattccaaggtcaaatttgtat 5838597  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
     ||||||||  | |||||||| | | ||||| | || || ||||| |  |||||||||||||| || |||||||||||||||||||| || || |||||     
T  5838598 ccctgacaatgaagagatgaagaaaatgattctcgaggagagtcatagaagtagcttgagtattcacccgggagctacgaagatgtatcatgatttgaag 5838697  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| | ||||||||| |||| ||||| ||||||||    
T  5838698 aagttattttggtggtttggattgaaacgtgatgt 5838732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 18966624 - 18966781
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagt 152  Q
    ||||||||||| || || |||||| | ||  |||| |||||||| |||||||||||  |||||||||  ||||| |||| | ||||| |||||||  |||    
T  18966624 aaggttgatgatcagggagtgttgtgatttcgaggtagaatttgtattcctgacaatgatgagatgaggaagat-gattcttgaagagagtcacagaagt 18966722  T
Q  153 agcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttg 211  Q
    ||||||||||| |||||||||||||| |||||||| || || ||||||||  |||||||    
T  18966723 agcttgagtattcatccgggagctacaaagatgtatcatgatttgaaaaatttgttttg 18966781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 19865664 - 19865503
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||  |||   ||||||| ||||||||  |  | |||||||| | |    
T  19865664 tagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagatttcgagttcgaatttgtattcctgatgatgaagagatgaagaaa 19865565  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | ||||| ||||| | ||||||||||||||| |||||||||||||||||||||||    
T  19865564 atgattcttgaagagagtcataggagtagcttgagtattcatccgggagctacgaagatgta 19865503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 24365367 - 24365200
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||| ||  | ||| |||| |  |||||| | || || |||||||    
T  24365367 gattttaaggttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgataatgaagagttgaagaagttgattcttgaggagagtcaca 24365268  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | ||||| |||||||| || ||||| ||||| || |||||||| || ||||| ||  |||||||||||    
T  24365267 atagtaggttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaattgttttggtgg 24365200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 1542497 - 1542597
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatg 234  Q
    ||||| |||||||  |||||||||||||| || |||||||||||||||||||| ||||| ||||| ||| | || ||||||  ||||||||| || ||||    
T  1542497 gaagagagtcacagaagtagcttgagtattcacccgggagctacgaagatgtatcacgatttgaagaagattttctggtggtctggtttgaaacgagatg 1542596  T
Q  235 t 235  Q
    |    
T  1542597 t 1542597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 16626055 - 16626230
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  16626055 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 16626153  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| |||||||||||||||||||||||||| || || || ||| | || ||||||  ||||||||| || |||||    
T  16626154 agtattcatccgggagctacgaagatgtaccatgatttaaagaagattttctggtggtctggtttgaaacgagatgt 16626230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 16926919 - 16927111
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| ||| || || || || ||||| || ||||||||||| ||| ||||  | ||||||||    
T  16926919 tcaagtttgtagacttgttggttgctagtaattagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcggatttgcat 16927018  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacga 193  Q
    ||||||| |    |||||||  | | ||||| | ||||| |||||||  |||||||||||||| || |||||||||||||||||||| |||||    
T  16927019 tcctgacgatgcagagatgaggaaaatgattcttgaagagagtcacagaagtagcttgagtattcacccgggagctacgaagatgtatcacga 16927111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 16962724 - 16962916
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || || || ||||| || || |||||||| ||| ||||  | ||||||||    
T  16962724 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagtcgatgaccatggcgtgttgagattccgaggtcggatttgcat 16962823  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacga 193  Q
    ||||||| |    |||||||  | | ||||| | ||||| ||||| |  |||||||||||||| ||||||||||||||||||||||| |||||    
T  16962824 tcctgacgatgcagagatgaggaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgtatcacga 16962916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 187
Target Start/End: Original strand, 20636582 - 20636766
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||| ||||||||  | ||||| ||  | ||||| || ||||||||||||||  |||| || ||||  ||||    
T  20636582 aagtttgtggacttgttggttgctagtaatcagactgaaggcagtgattttaaaatcgatgatcaaggtgtgttgaggtttcgaggtaggatttttattc 20636681  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    | ||| |  |||||||||| | | ||||| | ||||| ||||| |  |||| ||||||||| |||||||||||||||||||||||    
T  20636682 cagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttgagtattcatccgggagctacgaagatgta 20636766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 215
Target Start/End: Original strand, 22761793 - 22761948
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || ||||||||||||||  |||| || ||||| ||||| ||| |  |||||||||| | | ||||| | ||||| ||||| |  |||| |||||    
T  22761793 gatgatcaaggtgtgttgaggtttcgaggtaggatttgtattccagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttga 22761892  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||||||||||||||||||||||| || ||  | || ||| |||||||||||    
T  22761893 gtattcatccgggagctacgaagatgtatcatgatctaaagaagttgttttggtgg 22761948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 25609140 - 25609354
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||||||||||| ||  || ||| ||||||||| |||||||  || ||||| ||| | ||||| || ||||| ||||||||  |||| || ||||| ||    
T  25609140 tcaagtttgtggacttgttggttgctagtaatcagactgaagacggtgattttaagatcgatgaccaaggtgtattgaggtttcgaggtaggatttgtat 25609239  T
Q  101 tcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaa 199  Q
    ||| ||| |  | |||||||| ||||| |||| | ||||| ||||| |  |||||||||||||| |||||||||||||| |||||||| || ||  | ||    
T  25609240 tccagacgatgaagagatgaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacaaagatgtatcatgatctaaa 25609338  T
Q  200 aaagctgttttggtgg 215  Q
     ||| |||||||||||    
T  25609339 gaagttgttttggtgg 25609354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 235
Target Start/End: Complemental strand, 15897043 - 15896862
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagt 152  Q
    ||||||||||| || || |||||| | ||  ||||||||||| | ||||||||| |  |||||||||| ||||| |||| |  |||| |||||||  |||    
T  15897043 aaggttgatgatcagggagtgttgcgattacgaggcagaattcgtattcctgacgatgatgagatgaagaagat-gattcttaaagagagtcacacaagt 15896945  T
Q  153 agcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    | ||||||||||||||| |||||||| |||||||| || || ||||| | | | |||||||||  ||| ||||| ||||||||    
T  15896944 atcttgagtatccatccaggagctacaaagatgtatcatgatttgaagaggttattttggtggtctgggttgaaacgtgatgt 15896862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 27566327 - 27566445
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    ||||||||||| ||| ||||  | ||||||||||||||| |    |||||||| | | ||||| | ||||| ||||| || |||||||||||||| ||||    
T  27566327 ggtgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaagaaaatgattcttgaagagagtcataaaagtagcttgagtattcatc 27566426  T
Q  169 cgggagctacgaagatgta 187  Q
    |||||||||| ||||||||    
T  27566427 cgggagctacaaagatgta 27566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 2874231 - 2874316
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||| ||||||||||||||||||||||| || || || || ||| | |||||||||  ||||||||| || |||||    
T  2874231 agtagcttgagtattcatccgggagctacgaagatgtatcatgatttaaagaagattttttggtggtctggtttgaaacgagatgt 2874316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 22434871 - 22434686
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| ||| || |||||||| ||||| |||||||||||||| ||| |||   ||||||| ||    
T  22434871 tcaagtttgtagacttgttggttgctagtaattagactgaagatggtgacttcaaggtcgatgaccacggtgtgttgagattccgagatcgaatttgtat 22434772  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgt 186  Q
    |||||   |  | || ||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||||||||||||| |||||||    
T  22434771 tcctgttgatgaagaaatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacaaagatgt 22434686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 22443269 - 22443084
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| ||| || |||||||| ||||| |||||||||||||| ||| |||   ||||||| ||    
T  22443269 tcaagtttgtagacttgttggttgctagtaattagactgaagatggtgacttcaaggtcgatgaccacggtgtgttgagattccgagatcgaatttgtat 22443170  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgt 186  Q
    |||||   |  | || ||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||||||||||||| |||||||    
T  22443169 tcctgttgatgaagaaatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacaaagatgt 22443084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 25113495 - 25113368
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  25113495 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 25113397  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  25113396 agtattcacccgggagctacgaagatgta 25113368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 27188367 - 27188204
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| |||| |||||||||||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  27188367 gtgttgagattccgaggaagaatttgcattccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 27188269  T
Q  171 ggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||| ||||| || || ||||| ||| | || ||||||  ||||||||| || |||||    
T  27188268 ggagctacgaaaatgtatcatgatttgaagaagattttctggtggtctggtttgaaacgagatgt 27188204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 27260873 - 27261036
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| |||| |||||||||||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  27260873 gtgttgagattccgaggaagaatttgcattccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 27260971  T
Q  171 ggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||| ||||| || || ||||| ||| | || ||||||  ||||||||| || |||||    
T  27260972 ggagctacgaaaatgtatcatgatttgaagaagattttctggtggtctggtttgaaacgagatgt 27261036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 24312515 - 24312633
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  24312515 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 24312613  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  24312614 ccgggagctacgaagatgta 24312633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 29591267 - 29591385
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  29591267 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 29591365  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  29591366 ccgggagctacgaagatgta 29591385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 187
Target Start/End: Original strand, 22077994 - 22078155
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aag 124  Q
    ||||||||| ||| ||| ||| ||||| ||  ||||||| || ||| ||||||||||  |||| |||||||| | ||  ||| |  |||||||||| |||    
T  22077994 tagtaatcagactaaagatggtgattttaaaattgatgatcaaggtatgttgaggtttcgaggaagaatttgtactctagacgatgatgagatgaagaag 22078093  T
Q  125 attgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    || |||| | ||||| ||||| |  |||||||||||||| || ||||||||||||||||||||    
T  22078094 at-gattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaagatgta 22078155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 28262547 - 28262662
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| |||| |||||||| ||||| ||| || | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  28262547 gtgttgagattccgagggagaatttgtattccagacgacgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 28262645  T
Q  171 ggagctacgaagatgta 187  Q
    |||||||||||||||||    
T  28262646 ggagctacgaagatgta 28262662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 28341296 - 28341411
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| |||| |||||||| ||||| ||| || | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  28341296 gtgttgagattccgagggagaatttgtattccagacgacgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 28341394  T
Q  171 ggagctacgaagatgta 187  Q
    |||||||||||||||||    
T  28341395 ggagctacgaagatgta 28341411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 16098925 - 16098838
Alignment:
Q  128 gattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||| ||| |||| | |||||| |||||||| ||||| ||||| || |||||||| || || ||||| ||| |||||||||||    
T  16098925 gattttggacgaaggtcataggagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagaagttgttttggtgg 16098838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 18436486 - 18436397
Alignment:
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||| |||||||||||||||  ||||  |||||||| ||||||||| |||| || ||||| || || ||||| ||| | |||||||||    
T  18436486 ttgattctggaagaaagtcacagaagtaatttgagtattcatccgggacctacaaaaatgtatcatgatttgaagaagttattttggtgg 18436397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 159; Significance: 9e-85; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 32814 - 33048
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | | |||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  32814 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 32913  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  32914 tcctgacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccgggagctacgaagatgtatcacgatttgaaa 33013  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||  ||||||||||||||||||    
T  33014 aagctgttttggtggcctggtttgaagcgtgatgt 33048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 56087 - 56268
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||| ||||| || ||||| ||||| |||||||| |||||||| |||||||||||  ||||| ||||||  |||||||| ||||||||||||||||    
T  56087 ttcaaggtggatgatcagggtgtattgagattcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaaga 56186  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||| ||||||| ||||||||||| || ||||| |||||||||||||||   ||||||||||||||    
T  56187 gtagcttgagtattcatccgagagctacaaagatgtaccatgatttgaagaagctgttttggtggtccggtttgaagcgtga 56268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 9e-85; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19613803 - 19613569
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | | |||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  19613803 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 19613704  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  19613703 tcctgacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccgggagctacgaagatgtatcacgatttgaaa 19613604  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||  ||||||||||||||||||    
T  19613603 aagctgttttggtggtctggtttgaagcgtgatgt 19613569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 11387549 - 11387784
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||  |||||||||| |||| | | | |||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  11387549 tcaagtttgtggatttaatggttactagtaatcaagctgaggatagtgatttcaaggttgatgaacaaggcgtgttgaggttcagaggcagaatttgtat 11387648  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||| ||||||  || ||||| || ||||| |||| ||||| ||| ||||||||||||||||||||||||||||| || ||||||||     
T  11387649 tcctgataatgatgagttgaaaaagttaattttagaggaaagccacaggagtaacttaagtatccatccgggagctacgaagatgtatcatgacttgaag 11387748  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    |   |||||||||||   ||||||||||||||||||    
T  11387749 agattgttttggtggtccggtttgaagcgtgatgtc 11387784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19148339 - 19148105
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||||| |||||||||||    
T  19148339 tcaagtttgtgggtttaatggttgctagtaatcaaactgaagatggtgatttcaaggttgatgatcagggtatgttgaggttcagaggaagaatttgcat 19148240  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  ||||||  |||||||| |||||||||||||  | |||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  19148239 tcctgataatgatgatttgaaaaagttgattttagaagaaagtcacataaatagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 19148140  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||  ||| ||||| ||||||||    
T  19148139 aaattgttttggtggtctgggttgaaacgtgatgt 19148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 20747738 - 20747504
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||||| |||||||||||    
T  20747738 tcaagtttgtgggtttaatggttgctagtaatcaaactgaagatggtgatttcaaggttgatgatcagggtatgttgaggttcagaggaagaatttgcat 20747639  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  ||||||  |||||||| |||||||||||||  | |||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  20747638 tcctgataatgatgatttgaaaaagttgattttagaagaaagtcacataaatagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 20747539  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||  ||| ||||| ||||||||    
T  20747538 aaattgttttggtggtctgggttgaaacgtgatgt 20747504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 236
Target Start/End: Complemental strand, 14434769 - 14434584
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||||||  | ||  ||||||  || ||||| || |||||||||||||    
T  14434769 ttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttagaggaaagtcacaaga 14434670  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||   | ||||||||||||||||    
T  14434669 gtagcttgagtattcatccgggagctacgaagatgtaccatgatttgaaaaagctgttttggtggtccgttttgaagcgtgatgtc 14434584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 16949595 - 16949826
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| |||||||||||| || ||||| | ||||| | | | || |||||||||||||| || ||||| ||||| || ||||| |||||||| ||||    
T  16949595 aagtttgttgatttaatgattattggtaatgacactgaggatagtgacttcaaggttgatgatcagggtgttttgagatttagaggaagaatttgtattc 16949694  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    || ||||  ||||| ||||||  |||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||| |||    
T  16949695 ctaacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcacccgggagctacaaagatgtaccacgatttgagaaa 16949794  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
     ||||||||||||   ||||| |||||||||||    
T  16949795 -ctgttttggtggtccggtttcaagcgtgatgt 16949826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 15101724 - 15101958
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||| | ||||| ||| ||||| ||||| | ||||||| | | || |||||||||||||| || |||||| ||||||||||||| |||||||| ||    
T  15101724 tcaagtttattgatttgatggttgttggtaatgacactgaagatagtgacttcaaggttgatgatcagggtgtgctgaggttcagaggaagaatttgtat 15101823  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||| ||||  ||||||  |||||||| || |||||||||||||||||||| ||||| |||||||||||||| || ||||| || || |||||     
T  15101824 tcctgataacgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatccgggagctacaaaaatgtatcatgatttgaag 15101923  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||  ||| ||||| ||||||||    
T  15101924 aagctgttttggtggtctgggttgaaacgtgatgt 15101958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 578 - 762
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||  ||||||||||| | | |||||| |||||||||||  ||||| ||||||  |||||||| ||||||||||||||||    
T  578 ttcaaggttgatgatcagggtgttatgaggttcagaagaaaaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaaga 677  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||| ||||||||||| || ||||||||||| || ||||| || ||||||||||||   |||||||||||||||||    
T  678 gtagcttgagtattcatccgggagcaacaaagatgtaccatgatttgaagaaactgttttggtggtccggtttgaagcgtgatgt 762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 14285547 - 14285728
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| || ||||| |||||||||||  ||||| ||||||  |||||||| || |||||||||||||    
T  14285547 ttcaaggttgatgatcagggtgtgttgagattcagagggaggatttgtattcctgacaatgatgagttgaaaaagttgattttagaggaaagtcacaaga 14285646  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| ||||| |||||||| || |||||||| || ||||| |||||||||||||||   |||||||| |||||    
T  14285647 gtagcttgagtattcatcctggagctacaaaaatgtaccatgatttgaagaagctgttttggtggtccggtttgaaacgtga 14285728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 15341509 - 15341328
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || || || ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  || ||||| ||||||| ||||||||    
T  15341509 ttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttagaagaaattcacaaga 15341410  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||   |||||||| |||||    
T  15341409 gtagcttgagtattcatccgggagctacgaagatgtaccatgatttgaagaagctgttttggtggtccggtttgaaacgtga 15341328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 12205923 - 12206155
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || | | ||| || |||||||||| | | || |||||||||||||| || ||||||||||| ||| |||| |||||||| ||||    
T  12205923 aagtttgtggatttgttggtggctagcaaccaaactgaagatagtgacttcaaggttgatgatcaaggtgtgttgagattccgaggaagaatttgtattc 12206022  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||| ||||||| |||||||| |||||||||||||  |||||||| ||||| |||||||||||||  |||||||  || |||||||| ||    
T  12206023 ctgataatgatgagttgaaaaggttgattttagaagaaagtcacagaagtagcttaagtattcatccgggagctataaagatgtttcatgacttgaagaa 12206122  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
      |||||||||||   |||||||||||||||||    
T  12206123 attgttttggtggtccggtttgaagcgtgatgt 12206155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 18053124 - 18053308
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||  | || |||||||  || || || || |||||||| ||||    
T  18053124 ttcaaggttgatgaacagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcttagaggaaagtcataaga 18053223  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| |||||    
T  18053224 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 18053308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 232
Target Start/End: Complemental strand, 13666612 - 13666434
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || | |||||||||||||||||| |||||||| |||||||| ||  ||||  ||||||  || ||||| || ||||||||||||||||    
T  13666612 aaggttgatgatcaggatgtgttgaggttcagaggaagaatttgtattcctgataatgatgatttgaaaaagttaattttagaggaaagtcacaagagta 13666513  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||| ||||| ||||||||||||||||| ||||| || || ||||| |||||||||||||||   ||||||||||||||    
T  13666512 gcttaagtattcatccgggagctacgaaaatgtatcatgatttgaagaagctgttttggtggtccggtttgaagcgtga 13666434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 12456780 - 12456616
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||  | ||||||||||| |||||||| |||||||||||  ||||| ||||||  |||||||| ||||||||||||||||    
T  12456780 ttcaaggttgatgatcagggtgttctaaggttcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaaga 12456681  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| |||||||| || ||||| ||||| || |||||||| || ||||| |||||||||||||||    
T  12456680 gtagtttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaagctgttttggtgg 12456616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 14263365 - 14263599
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||||| || ||||||||| ||  ||||||| ||||||||| | | || |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  14263365 tcaagttcgttgatttaatggttactagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 14263464  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| |   ||||  ||||||  |||||||| || ||||||||||  | |||| | ||||| ||||| ||| |||| |||||||| || ||||||||     
T  14263465 tcctgatagtgatgatttgaaaaagttgattttagaggaaagtcacagaaatagcctaagtattcatccaggaactacaaagatgtatcatgacttgaag 14263564  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| |||||||||||  ||| ||||| ||||||||    
T  14263565 aagttgttttggtggtctgggttgaaacgtgatgt 14263599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 16071416 - 16071613
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| |||||||||| |||||| ||| ||||||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  16071416 tcaagtttgttgatttaatggttgctagtaatcaagctgaagatggtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtat 16071515  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaa 199  Q
    || ||| ||  ||||  | ||||| |||||||| || ||||| || |  |||||||| ||||| |||||||||||||| ||||| ||||| || |||||    
T  16071516 tcatgataatgatgatttaaaaag-ttgattttagaggaaagccatagaagtagcttaagtattcatccgggagctacaaagatataccatgatttgaa 16071613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 14130873 - 14130766
Alignment:
Q  129 attttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagc 228  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||   | ||||||||    
T  14130873 attttagaggaaagtcacaagagtagcttgagtattcatccgggagctacgaagatgtaccatgatttgaaaaagctgttttggtggtccgttttgaagc 14130774  T
Q  229 gtgatgtc 236  Q
    ||||||||    
T  14130773 gtgatgtc 14130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 23505041 - 23505225
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||| | || |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||| ||||    
T  23505041 ttcaaggttgatgatcagggtgtgctaagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 23505140  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| |||||    
T  23505141 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 23505225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 14040820 - 14040588
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| |||||  || ||||||||||||| ||||||| | | ||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||    
T  14040820 aagtttgtagatttgttggttgttagtaatcagactgaagatagtgattttaaaatcgatgatcaaggtgtgttgagattccgaggtagaatttgtattc 14040721  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    | |||    |||||||||| | | ||| | | ||||| ||||| |  ||||| |||||||| ||||||||||||||||||||||| || || ||||||||    
T  14040720 cagacgctgatgagatgaagaaaatgaatcttgaagagagtcatagaagtagtttgagtattcatccgggagctacgaagatgtatcatgatttgaaaaa 14040621  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
    | |||||||||||  ||| ||||| ||||||||    
T  14040620 gttgttttggtggtctgggttgaaacgtgatgt 14040588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 14350850 - 14350618
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| |||||  || ||||||||||||| ||||||| | | ||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||    
T  14350850 aagtttgtagatttgttggttgttagtaatcagactgaagatagtgattttaaaatcgatgatcaaggtgtgttgagattccgaggtagaatttgtattc 14350751  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    | |||    |||||||||| | | ||| | | ||||| ||||| |  ||||| |||||||| ||||||||||||||||||||||| || || ||||||||    
T  14350750 cagacgctgatgagatgaagaaaatgaatcttgaagagagtcatagaagtagtttgagtattcatccgggagctacgaagatgtatcatgatttgaaaaa 14350651  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
    | |||||||||||  ||| ||||| ||||||||    
T  14350650 gttgttttggtggtctgggttgaaacgtgatgt 14350618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 12457721 - 12457554
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||| ||||| ||| |||| |||||||||||| ||||  |||| |  |||||| | || || |||||||    
T  12457721 gattttaaggttgatgaccaaggtgtgctgaggtttagaggaagagtttgtattcctgacaacgatgatttgaagaagttgattcttgaggagagtcaca 12457622  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||| || ||||| || ||||||||||||    
T  12457621 agagtaggttgagtattcacccgggggctacaaagatgtaccatgatttgaagaaactgttttggtgg 12457554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 15625595 - 15625465
Alignment:
Q  85 gaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaaga 183  Q
    ||||||||||||| |||||||||||  |||||||||| ||||| |||| | |||||||||||||  |||||||||||||| |||||||||||||| ||||    
T  15625595 gaggcagaatttgtattcctgacaatgatgagatgaagaagat-gattcttgaagaaagtcacagaagtagcttgagtattcatccgggagctacaaaga 15625497  T
Q  184 tgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| || || ||||| ||| |||||||||||    
T  15625496 tgtatcatgatttgaagaagttgttttggtgg 15625465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 11771386 - 11771618
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  |||||| ||||||||| ||||||| | | ||||| ||  | ||||| || || ||| |||| ||  ||||||||||||| ||||    
T  11771386 aagtttgtggacttgttgattgctagtaatcagactgaagatagtgattttaaaatcgatgatcaaggcgtggtgagatttcgaggcagaatttgtattc 11771485  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    ||||| |  |||||||||| ||||| |||| | ||||| ||||| |  |||||||||||||| || |||||||||||||||||||| || || ||||| |    
T  11771486 ctgacgatgatgagatgaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaagatgtatcatgatttgaaga 11771584  T
Q  202 agctgttttggtgggttggtttgaagcgtgatgt 235  Q
    || |||||||||||  ||| ||||| ||||||||    
T  11771585 agttgttttggtggtctggattgaaacgtgatgt 11771618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 13022435 - 13022271
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||||||| |||| || |||||  ||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | ||||| ||||||||||    
T  13022435 ttcaaggtttatgatcagggtgttctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtcacaaga 13022336  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| |||||||| || ||||| ||||| ||||||||||| || ||||| || ||||||||||||    
T  13022335 gtaggttgagtattcacccgggggctacaaagatgtaccatgatttgaagaaactgttttggtgg 13022271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 15204721 - 15204532
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aag 124  Q
    ||||||| | ||||||| | | || |||||||| ||||| || ||  ||||||| ||| ||||||||||||| ||||||||| |  | ||||| || |||    
T  15204721 tagtaattagactgaagatagtgacttcaaggtcgatgatcagggaatgttgagattccgaggcagaatttgtattcctgacgatgaagagataaagaag 15204622  T
Q  125 attgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    || |||| | ||||| |||||||| |||||||||||||| ||||||| ||||||||||||||| || || ||||| ||| |||||||||||    
T  15204621 at-gattcttgaagagagtcacaaaagtagcttgagtattcatccggaagctacgaagatgtatcatgatttgaagaagttgttttggtgg 15204532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 215
Target Start/End: Original strand, 321237 - 321394
Alignment:
Q  58 ttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagctt 157  Q
    ||||||| || ||||||||||| ||| |||  |||||||| ||||| ||| |  |||||||||| | | ||||| | ||||||||| | |  ||||||||    
T  321237 ttgatgatcaaggtgtgttgagattccgagatagaatttgtattccagacgatgatgagatgaagaaaatgattcttgaagaaagtgatagaagtagctt 321336  T
Q  158 gagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||||||| ||||||||||||||||| || || ||||| ||| |||||||||||    
T  321337 gagtatccatccaggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 15153825 - 15154034
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| | | ||||| ||  | ||||| || ||||||||||||||  |||| || ||||| ||||| ||| |  |||||||||| | |    
T  15153825 tagtaatcagactgaagatagtgattttaaaatcgatgatcaaggtgtgttgaggtttcgaggtaggatttgtattccagacgatgatgagatgaagaaa 15153924  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttga 225  Q
     ||||| | ||||| ||||| | ||||||||||||||||||||||||||||| ||||||||| || ||  |||| ||  |||||||||||  ||| ||||    
T  15153925 atgattcttgaagagagtcataggagtagcttgagtatccatccgggagctatgaagatgtatcatgatctgaagaatttgttttggtggtctggattga 15154024  T
Q  226 agcgtgatgt 235  Q
    | ||||||||    
T  15154025 aacgtgatgt 15154034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 26117773 - 26117940
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| | | |||| |||||||| ||  | ||| |||| |  |||||| | || || |||||||    
T  26117773 gattttaaggttgatgatcagggtgtgctgaggttcagaggtaaagtttgtattcctgataatgaagagttgaagaagttgattcttgaggagagtcaca 26117872  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||    
T  26117873 agagtaggttgagtattcacccgggggctactaaaatgtaccatgatttgaagaaactgttttggtgg 26117940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 9597125 - 9596950
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| ||||  | ||||||||||||||| |    |||||||| ||||| |||| | ||||| ||||| |  |||||||||    
T  9597125 gatgaccaaggtgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaagaagat-gattcttgaagagagtcatagaagtagcttg 9597027  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| ||||||||||||||||||||||| ||||| || || ||| | || ||||||  ||||||||| ||||||||    
T  9597026 agtattcatccgggagctacgaagatgtatcacgatttaaagaagattttatggtggtctggtttgaaacgtgatgt 9596950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 18178810 - 18178683
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||||||||| |||||  | ||||| || ||||| |||| | ||||||||||| |  |||||||||    
T  18178810 gatgatcaaggtgtgttgagattccgaggaagaatttgcattccagacaatgaagagattaagaagat-gattcttgaagaaagtcatagaagtagcttg 18178712  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  18178711 agtattcacccgggagctacgaagatgta 18178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 11305431 - 11305598
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||  ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  11305431 gatttcaaagttgatgatcaaggtgtactgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 11305530  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || ||||| || ||||| || || ||||| || ||||||||||||    
T  11305531 agagtagtttgagtattcacccaggggctacaaaaatgtatcatgatttgaagaaactgttttggtgg 11305598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 13967836 - 13968003
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| || |||||||| || |||||| ||||||||||||| ||| |||| |||| |||||   ||||  |||| |  |||||| | || || |||||||    
T  13967836 gattttaaagttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcttgacagtgatgatttgaagaatttgattctcgaggagagtcaca 13967935  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||    
T  13967936 agagtaggttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaactgttttggtgg 13968003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 49153382 - 49153215
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||  ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  49153382 gatttcaaagttgatgatcagggtgttctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 49153283  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || ||||| || ||||| || || ||||| || ||||||||||||    
T  49153282 agagtaggttgagtattcacccaggggctacaaaaatgtatcatgatttgaagaaactgttttggtgg 49153215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 11552304 - 11552431
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| |||||  ||||  | ||||| || ||||| |||| | || || ||||||| ||||||||||    
T  11552304 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccatacaatgaagagattaagaagat-gattcttgaggagagtcacaggagtagcttg 11552402  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  11552403 agtattcatccgggagctacgaagatgta 11552431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 12688494 - 12688442
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  12688494 gaagagagtcacaggagtagcttgagtattcatccgggagctacgaagatgta 12688442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 14212652 - 14212576
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaa 226  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || || ||| | || ||||||  |||||||||    
T  14212652 agtagcttgagtatccatccgggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaa 14212576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 8199696 - 8199569
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  8199696 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 8199598  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  8199597 agtattcatccgggagctacgaagatgta 8199569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 8708673 - 8708546
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  8708673 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 8708575  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  8708574 agtattcatccgggagctacgaagatgta 8708546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 10872063 - 10871936
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  10872063 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 10871965  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  10871964 agtattcatccgggagctacgaagatgta 10871936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 23202815 - 23202942
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| ||||| |||||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  23202815 gatgatcaaggtgtgttgagattccgaggaagaatatgcattccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 23202913  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  23202914 agtattcacccgggagctacgaagatgta 23202942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 23508942 - 23509069
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| ||||| |||||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  23508942 gatgatcaaggtgtgttgagattccgaggaagaatatgcattccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 23509040  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  23509041 agtattcacccgggagctacgaagatgta 23509069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 44790553 - 44790680
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  44790553 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 44790651  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  44790652 agtattcatccgggagctacgaagatgta 44790680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 13687123 - 13687005
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    |||||| |||| ||| |||| |||||||| || || |||||  | ||||| || | | ||||| | ||||| ||||| |  |||||||||||||| ||||    
T  13687123 ggtgtgctgagattccgaggaagaatttgtatcccagacaatgaagagattaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatc 13687024  T
Q  169 cgggagctacgaagatgta 187  Q
    |||||||||||||||||||    
T  13687023 cgggagctacgaagatgta 13687005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 14333374 - 14333337
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  14333374 agtagcttgagtattcatccgggagctacgaagatgta 14333337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 18551050 - 18551087
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18551050 agtagcttgagtattcatccgggagctacgaagatgta 18551087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 11236415 - 11236542
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  11236415 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 11236513  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  11236514 agtattcacccgggagctacgaagatgta 11236542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 14955622 - 14955499
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| |||||  | ||||| || |||| ||||| | ||||| ||||||| ||||||||||    
T  14955622 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaaga-tgattcttgaagagagtcacaggagtagcttg 14955524  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||    ||||||||||||||||    
T  14955523 agtattcat----gagctacgaagatgta 14955499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 8211374 - 8211463
Alignment:
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||| |||| || |||||||||||||| |||||||| || ||||| ||||| || |||||||| || || || ||  |||||||||||    
T  8211374 ttgattctggaggagagtcacaagagtaggttgagtattcacccgggggctacaaaaatgtaccatgatttaaagaaattgttttggtgg 8211463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 16461 - 16641
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| |||||||  || || || || || || || ||| |||||||||| ||| ||||  | ||||| ||    
T  16461 tcaagtttgtagacttgttggttgctagtaatcagactgaagacggtgactttaaagtcgacgatcacagtgtgttgagattccgaggtcggatttgtat 16560  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaa 181  Q
    ||||||| |    |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||||||||||||||||    
T  16561 tcctgacgatgcagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaa 16641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 27364753 - 27364987
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | | |||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  27364753 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 27364852  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  27364853 tcctgacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccgggagctacgaagatgtatcacgatttgaaa 27364952  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||  ||||||||||||||||||    
T  27364953 aagctgttttggtggtctggtttgaagcgtgatgt 27364987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 228
Target Start/End: Complemental strand, 23277543 - 23277318
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||| || ||||| ||| ||||| ||||| ||||||||| | | ||||||||||||||||| || |||||||||||||||||||| |||||||| ||||    
T  23277543 aagttcgttgatttgatggttgttggtaatgaaactgaagatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattc 23277444  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||  ||||||  || ||||| || |||||||||||||||||||||||||| |||||||||||||| |||||||| || || ||||| ||    
T  23277443 ctgataatgatgatttgaaaaagttaattttagaggaaagtcacaagagtagcttgagtattcatccgggagctacaaagatgtatcatgatttgaagaa 23277344  T
Q  203 gctgttttggtgggttggtttgaagc 228  Q
    ||| |||||||||   ||||||||||    
T  23277343 gctattttggtggtccggtttgaagc 23277318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 19651776 - 19651960
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||| ||||| |  ||||| ||||| |||||||| ||||||||||||||||||||  ||||| ||||||  |||||||| ||||||||||||||||    
T  19651776 ttcaaggtggatgatcggggtgtattgagattcagaggaagaatttgcattcctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaaga 19651875  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||| ||| ||||||||||||||||| ||||| || || ||||| |||||| ||||||||   |||||||||||||||||    
T  19651876 gtagcttgaatattcatccgggagctacgaaaatgtatcatgatttgaagaagctgatttggtggtccggtttgaagcgtgatgt 19651960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 23294702 - 23294473
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||||||||||||| ||| | ||||| || |||| | | | || |||||||||||||| || ||||||||||| |||||||| |||||||||||||    
T  23294702 aagtttgtggatttaatggttgctggtaatgaagctgaggatagtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattc 23294603  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    ||||  |  || |  ||||||  || ||| | || |||||||||||||||||||||| ||| ||||||||||| ||||| ||||| || || ||||| ||    
T  23294602 ctgatgatgataatttgaaaaagttaattctagaggaaagtcacaagagtagcttgaatattcatccgggagcaacgaaaatgtatcatgatttgaagaa 23294503  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||   ||||||||| ||||    
T  23294502 gctgttttggtggtccggtttgaagtgtga 23294473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 27788460 - 27788276
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||| ||||    
T  27788460 ttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 27788361  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| |||||    
T  27788360 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 27788276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27209846 - 27210072
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||| ||| ||  |||||||||  ||||   | | ||||||||| ||||||| || ||||||||||| || ||||||| ||| || ||    
T  27209846 tcaagtttgtggattttatggttactagtaatcaggctgagaatagtgatttcaagattgatgagcaaggtgtgttgagatttagaggcaaaatctgtat 27209945  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||  | ||  |||| |  ||||| || ||||||||||| ||||| | ||||||||| ||||||||||||||||| ||||| || ||||||||     
T  27209946 tcctgacaataaagaattgaagaagttgatattagaagaaagtcataagagcaacttgagtattcatccgggagctacgaaaatgtatcatgacttgaag 27210045  T
Q  201 aagctgttttggtgggttggtttgaag 227  Q
    ||| |||||||||||  ||||||||||    
T  27210046 aagttgttttggtggtctggtttgaag 27210072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 23111503 - 23111290
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || ||| |||||||||||||  || ||| || |||||||||||||| || ||| ||||||| ||| |||||||||||| |||||    
T  23111503 aagtttgtggatttgttggttgctagtaatcaaactagagatggtgacttcaaggttgatgatcagggtatgttgagattctgaggcagaattttcattc 23111404  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagc-ttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
     |||||   ||||| ||||||  |||||||| || ||||||||||  |||||| || ||||| |||||||||||||| || ||||| || |||||||| |    
T  23111403 ttgacagtgatgagttgaaaaagttgattttagaggaaagtcacataagtagctttaagtattcatccgggagctacaaaaatgtatcatgacttgaaga 23111304  T
Q  202 agctgttttggtgg 215  Q
    |  |||||||||||    
T  23111303 aattgttttggtgg 23111290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 24949309 - 24949127
Alignment:
Q  51 ttcaaggttgatgaacacggt-gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaag 149  Q
    |||||||||||||| || ||| ||| |||| |||||||| ||||||||||||||| |  |  |||   ||||||  |||||||| || ||||||||||||    
T  24949309 ttcaaggttgatgatcatggttgtgatgagattcagaggaagaatttgcattcctcatgatgatggtttgaaaaagttgattttagaggaaagtcacaag 24949210  T
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||| ||||| |||| |||||||||||| ||||| || || ||||| |||||||||||||||    |||||||||||||    
T  24949209 agtagcttaagtattcatctgggagctacgaaaatgtatcatgatttgaagaagctgttttggtggtccagtttgaagcgtga 24949127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23099692 - 23099797
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||||||||||||||| || ||  |||||||||| |||| | | | |||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  23099692 tcaagtttgtggatttattggttactagtaatcaagctgaggctagtgatttcaaggttgatgaacaaggcgtgttgaggttcagaggcagaatttgtat 23099791  T
Q  101 tcctga 106  Q
    ||||||    
T  23099792 tcctga 23099797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 20828981 - 20828814
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  20828981 gatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 20828882  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || ||||| ||||||||||| || ||||| || ||||||||||||    
T  20828881 agagtaggttgagtattcacccaggggctacaaagatgtaccatgatttgaagaaactgttttggtgg 20828814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 20833707 - 20833540
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  20833707 gatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 20833608  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || ||||| ||||||||||| || ||||| || ||||||||||||    
T  20833607 agagtaggttgagtattcacccaggggctacaaagatgtaccatgatttgaagaaactgttttggtgg 20833540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 31831380 - 31831213
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||||||||||||||||| ||| |||| |||||||||||  | ||| | || |  |||||| | || || |||||||    
T  31831380 gatttcaaagttgatgatcagggtgtgttgaggttcagaggtagagtttgtattcctgacaatgaggagttaaagaagttgattcttgaggagagtcaca 31831281  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || ||||| || |||||||| || ||||| |||||||||||||||    
T  31831280 agagtaggttgagtattcacccaggggctacaaaaatgtaccatgatttgaagaagctgttttggtgg 31831213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 21324940 - 21325174
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  |||||| ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  21324940 tcaagtttgtagacttgttgattgctagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 21325039  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||||||  |  | |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || |||||||||||||||||||| ||||| || ||     
T  21325040 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaagatgtatcacgatttaaag 21325139  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| | || ||||||  ||| ||||| ||||||||    
T  21325140 aagattttctggtggtctggattgaaacgtgatgt 21325174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 12575072 - 12574888
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||| | || |||||||| ||| |||| || ||||| ||  | || |||||||  || ||  | || |||||||| ||||    
T  12575072 ttcaaggttgatgatcagggtgtgcttagattcagaggtagagtttgtatccctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 12574973  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || |||||| ||||||||||||||  ||| |||||||| |||||    
T  12574972 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaagagctgttttggtggtctgggttgaagcgagatgt 12574888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 24876482 - 24876657
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||||| ||||||||||    
T  24876482 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagtcacaggagtagcttg 24876580  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| ||||||||||||||||||||||| || || || || ||| | || |||||| |||||||||| || |||||    
T  24876581 agtattcatccgggagctacgaagatgtatcatgatttaaagaagattttctggtggtttggtttgaaacgagatgt 24876657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 1064473 - 1064306
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||  ||||||||||||| ||| |||| |||||| ||||  | ||| |||| |  |||||| | || || |||||||    
T  1064473 gatttcaaagttgatgatcagggtgtactgaggttcagaggtagagtttgtattcctaacaatgaagagttgaagaagttgattcttgaggagagtcaca 1064374  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||| || ||||| || ||||||||||||    
T  1064373 agagtagtttgagtattcacccgggggctacaaagatgtaccatgatttgaagaaactgttttggtgg 1064306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 24676258 - 24676072
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||| ||||||| ||    
T  24676258 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggccgaatttgtat 24676159  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||  |  | |||||||| | | ||||| | ||||| ||||| |  |||||| ||||||| |||||||||||||||||||||||    
T  24676158 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcctgagtattcatccgggagctacgaagatgta 24676072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 21890417 - 21890606
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| |||||||| || ||||| ||  | ||||| || ||||||||||||||  |||| || ||||| ||||  ||| || |||||||||| | |    
T  21890417 tagtaatcagactgaaggaggtgattttaaaatcgatgatcaaggtgtgttgaggtttcgaggtaggatttgtattctagacgacgatgagatgaagaaa 21890516  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
     ||||| | ||||| ||||| |  |||||||||||||| ||||  |||||||||||||||||||||||  | || ||| |||||||||||    
T  21890517 atgattcttgaagagagtcatagaagtagcttgagtattcatctaggagctacgaagatgtaccacgatctaaagaagttgttttggtgg 21890606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 22756139 - 22756325
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  22756139 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 22756238  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||  |  | |||||||| | | | ||| | ||||| ||||| |  |||||||||||||| || ||||||||||||||||||||    
T  22756239 tcctgatgatgaagagatgaagaaaataattcttgaagagagtcatagaagtagcttgagtattcaaccgggagctacgaagatgta 22756325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 24819362 - 24819574
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || ||| ||||||||  ||||||| | | || ||||| || ||||| || || |||||||| ||| |||| |||||||| ||||    
T  24819362 aagtttgtggatttgttggttgctagtaatccgactgaagatagtgacttcaaagtcgatgatcaaggagtgttgagattctgaggtagaatttgtattc 24819461  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    | ||| |  |||||||||| ||||| || | |  |||| |||||||  ||||||||||||||||||||||||||||  |||||||| ||  | ||||| |    
T  24819462 cagacgatgatgagatgaagaagat-gactcttaaagagagtcacagaagtagcttgagtatccatccgggagctagaaagatgtatcattatttgaaga 24819560  T
Q  202 agctgttttggtgg 215  Q
     | |||||||||||    
T  24819561 ggttgttttggtgg 24819574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 21144774 - 21144901
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  21144774 gatgatcaaggtgtgttgagattccgagggagaatttgtattccagacaatgaggagattaagaagat-gattcttgaagagagtcatagaagtagcttg 21144872  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  21144873 agtattcatccgggagctacgaagatgta 21144901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 27371979 - 27371804
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  27371979 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 27371881  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| |||||||||||||||||||||||||| || || || ||| | || ||||||  ||||||||| || |||||    
T  27371880 agtattcatccgggagctacgaagatgtaccatgatttaaagaagattttctggtggtctggtttgaaacgagatgt 27371804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 215
Target Start/End: Complemental strand, 23067101 - 23066946
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || ||||||||| ||||  |||| || ||||| ||||| ||| |  |||||||||| | | ||||| | ||||| ||||| |  |||| |||||    
T  23067101 gatgatcaaggtgtgttgcggtttcgaggtaggatttgtattccagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttga 23067002  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||||||||||||||||||||||| |||||  | || ||| |||||||||||    
T  23067001 gtattcatccgggagctacgaagatgtatcacgatctaaagaagttgttttggtgg 23066946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 9610846 - 9610719
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  9610846 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 9610748  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  9610747 agtattcatccgggagctacgaagatgta 9610719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 10869485 - 10869433
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||| ||||| | ||||||||||||||| |||||||||||||||||||||||    
T  10869485 gaagagagtcataggagtagcttgagtattcatccgggagctacgaagatgta 10869433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 16923599 - 16923472
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  16923599 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 16923501  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  16923500 agtattcatccgggagctacgaagatgta 16923472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 16926070 - 16925943
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  16926070 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 16925972  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  16925971 agtattcatccgggagctacgaagatgta 16925943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 16982862 - 16982735
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  16982862 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 16982764  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  16982763 agtattcatccgggagctacgaagatgta 16982735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 16999710 - 16999583
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  16999710 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 16999612  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  16999611 agtattcatccgggagctacgaagatgta 16999583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 17064427 - 17064300
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  17064427 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 17064329  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  17064328 agtattcatccgggagctacgaagatgta 17064300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 17068085 - 17067958
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  17068085 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 17067987  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  17067986 agtattcatccgggagctacgaagatgta 17067958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 27218726 - 27218599
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  27218726 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 27218628  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  27218627 agtattcatccgggagctacgaagatgta 27218599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 24710735 - 24710617
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  24710735 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 24710637  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  24710636 ccgggagctacgaagatgta 24710617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 41608127 - 41608245
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  41608127 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 41608225  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  41608226 ccgggagctacgaagatgta 41608245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 24262990 - 24262953
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24262990 agtagcttgagtattcatccgggagctacgaagatgta 24262953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 44385392 - 44385429
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44385392 agtagcttgagtattcatccgggagctacgaagatgta 44385429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 45530146 - 45530066
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||||||||  ||||  |||||||| |||||||||||||| || ||||| || || ||||| ||| |||||||||||    
T  45530146 gaagaaagtcacagaagtaatttgagtattcatccgggagctacaaaaatgtatcatgatttgaagaagttgttttggtgg 45530066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 11357688 - 11357762
Alignment:
Q  141 agtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||||||||| |||||||| || || || ||||| || ||||| || |||||||| || ||||||||||||    
T  11357688 agtcacaagagtagtttgagtattcacccaggggctacaaaaatgtatcatgacttgaagaaactgttttggtgg 11357762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 30210725 - 30210799
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttt 209  Q
    |||||||||||||| ||||  |||||||| |||||||||||||| || ||||| || || ||||| ||| |||||    
T  30210725 gaagaaagtcacaaaagtaatttgagtattcatccgggagctacaaaaatgtatcatgatttgaagaagttgttt 30210799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 22324679 - 22324716
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  22324679 agtagtttgagtattcatccgggagctacgaagatgta 22324716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 24707177 - 24707342
Alignment:
Q  22 ttgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa 121  Q
    ||||||||||||| ||||||| ||| || || || || ||||| || ||||||||||| ||| ||||  ||||||| ||||||||  |  |   ||||||    
T  24707177 ttgttagtaatcagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcgaatttgtattcctgatgatgaattgatgaa 24707276  T
Q  122 aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     | | || || | ||||| ||||| |  |||||||||||||| || |||||| |||||||||||||    
T  24707277 gaaaatggttcttgaagagagtcatagaagtagcttgagtattcacccgggatctacgaagatgta 24707342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 5e-83; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 13971485 - 13971716
Alignment:
Q  4 agtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcc 103  Q
    ||||||||||||||||  ||  |||||||||| |||| | | | |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13971485 agtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcattcc 13971584  T
Q  104 tgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaag 203  Q
     |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13971585 cgacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccgggagctacgaagatgtatcacgacttgaaaaag 13971684  T
Q  204 ctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||  ||||||||||||||||||    
T  13971685 ctgttttggtggtctggtttgaagcgtgatgt 13971716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 14087440 - 14087206
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | | |||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  14087440 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 14087341  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  14087340 tccagacaacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccgggagctacgaagatgtatcacgatttgaaa 14087241  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||  ||||||||||||||||||    
T  14087240 aagctgttttggtggcctggtttgaagcgtgatgt 14087206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 14574690 - 14574476
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||| | ||||||||| | | || |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  14574690 tcaagtttgttgatttgatggttgctggtagtgaaactgaagatagtgacttcaaggttgatgatcatggtgtgttgaggttcagaggaagaatttgcat 14574591  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| |   ||||| ||||||  |||||| | ||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||     
T  14574590 tcctgatagtgatgagttgaaaaagttgattctagaagaaagtcacaagagtagcttaagtattcatccgggagctacaaagatgtatcacgacttgaag 14574491  T
Q  201 aagctgttttggtgg 215  Q
    ||  |||||||||||    
T  14574490 aaattgttttggtgg 14574476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 16380340 - 16380504
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||||||  | ||  ||||||  || ||||| || |||||||||||||    
T  16380340 ttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttagaggaaagtcacaaga 16380439  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  16380440 gtagcttgagtattcatccgggagctacgaagatgtaccatgatttgaaaaagctgttttggtgg 16380504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 13319869 - 13320095
Alignment:
Q  6 tttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctg 105  Q
    ||||| ||||||||||||| | || || |||||||   | | ||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||    
T  13319869 tttgttgatttaatgattgctggttatgaaactgagaatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattcctg 13319968  T
Q  106 acaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagct 205  Q
    |  |  |||   ||||||  |||||||| || ||||||||||||||||| |||||||| || |||||||||||||| |||||||| || ||||| |||||    
T  13319969 atgatgatggtttgaaaaagttgattttagaggaaagtcacaagagtagattgagtattcacccgggagctacgaaaatgtaccatgatttgaagaagct 13320068  T
Q  206 gttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||  |||||||||||||||    
T  13320069 gttttggtggtctggtttgaagcgtga 13320095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 18133710 - 18133939
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||  |||| ||||||||| ||||| ||||||| | | | || || ||||||||||| || |||||||| ||||||||||| |||||| | ||||    
T  18133710 aagtttgttcatttgatgattgttggtaatgaaactgaggatagtgactttaaggttgatgatcagggtgtgttaaggttcagaggaagaattagtattc 18133809  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  | ||| ||||||  || ||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||| || || ||||| ||    
T  18133810 ctgataatgacgagttgaaaaagttaattttggaagaaagtcacaagagtagcttaagtattcatccaggagctacaaagatgtatcatgatttgaagaa 18133909  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||   ||||||||||||||    
T  18133910 gctgttttggtggtccggtttgaagcgtga 18133939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 10419407 - 10419621
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||| |||||||||| |||| | ||| |||||||| ||||||||||| ||||| ||||| || ||||||||||||||  |    
T  10419407 tcaagtttgtggatttaatggttgatagtaatcaagctgaggatggtgatttcaaagttgatgaacaaggtgtattgagatttagaggcagaatttgtgt 10419506  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||| |||||  | ||  |||| |  |||||||| ||||||||||| |||||||  |||||||| ||||| ||||||||||| ||||| || ||||||||     
T  10419507 tcccgacaatgaagaattgaagaagttgattttagaagaaagtcataagagtaatttgagtattcatccaggagctacgaaaatgtatcatgacttgaag 10419606  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  10419607 aagttgttttggtgg 10419621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 4679155 - 4678971
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||| ||||    
T  4679155 ttcaaggttgatgaacagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 4679056  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| |||||    
T  4679055 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 4678971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 41178239 - 41178055
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||||||||||||||| |||||||||||  ||||||| |||||||| |||||||| ||  | || |||||||  |||||  | || |||||||| ||||    
T  41178239 ttcaaggttgatgaacagggtgtgttgagaatcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttgatcctagaggaaagtcataaga 41178140  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| |||||    
T  41178139 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 41178055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 17493397 - 17493166
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||| | | ||||||| | | || || ||||||||||| || |||||||||||||| ||||| |||||||| ||    
T  17493397 tcaagtttgttgatttgatggttgctggtagtgacactgaagatagtgacttaaaggttgatgatcagggtgtgttgaggtttagaggaagaatttgtat 17493298  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  | ||| ||||||  |||||||| || |||||||||||||||||||| ||||| ||| | ||||||||||| ||||| || || |||||     
T  17493297 tcctgataatgacgagttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcattctggagctacgaaaatgtatcatgatttgaag 17493198  T
Q  201 aagctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||||   ||||||||||||||    
T  17493197 aagctgttttggtggtccggtttgaagcgtga 17493166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 31939620 - 31939439
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||||||||||||  |  | ||  ||||||  |||||||| || ||||||||||||     
T  31939620 ttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattcctgatgatgacgaattgaaaaagttgattttagaggaaagtcacaagg 31939521  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||||||||||| ||||||||  | ||  ||||||||||||||||||||   |||||||| |||||    
T  31939520 gtagcttgagtattcatccgggagctacaaagatgtattatgatctgaaaaagctgttttggtggtccggtttgaaacgtga 31939439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 8758494 - 8758678
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||| ||||    
T  8758494 ttcaaggttgatgaacagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 8758593  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || ||||||||| |||||||||||  ||| |||||||| |||||    
T  8758594 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagttgttttggtggtctgggttgaagcgagatgt 8758678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 15228414 - 15228182
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || | | |||||| |||||||||| | | || |||||||||||||| || ||||||||||| ||| |||  |||||||  ||||    
T  15228414 aagtttgtggatttgttggtggctagtaaccaaactgaagatagtgacttcaaggttgatgatcaaggtgtgttgagattccgagtaagaatttctattc 15228315  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| |||||||||||||  |||||||| || |||||||| ||    
T  15228314 ctgataatgatgagttgaaaacgttgattttagaagaaagtcacagaagtagcttaagtattcatccgggagctataaagatgtatcatgacttgaagaa 15228215  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
      |||||||||||   |||||||| ||||||||    
T  15228214 attgttttggtggtccggtttgaaacgtgatgt 15228182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 11303188 - 11303349
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||||| ||||||||||| ||||||||||||||||| ||  ||||  | ||||| |||| ||| || ||||| ||||||||||    
T  11303188 aaggttgatgatcagggtgtgttaaggttcagaggaagaatttgcattcctgataatgatgatttcaaaaggttgagtttagaggaaaggcacaagagta 11303287  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||||| |||| |||||||||||| ||||| || || ||||| ||||| |||||||||    
T  11303288 gcttgagtattcatctgggagctacgaaaatgtatcatgatttgaagaagctattttggtgg 11303349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 31694598 - 31694779
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||||||||||||  |  | ||  ||||||  |||||||| || |||||||||||||    
T  31694598 ttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattcctgatgatgacgaattgaaaaagttgattttagaggaaagtcacaaga 31694697  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||||||||||| ||||||||  | ||  |||| ||| |||||||||||   |||||||| |||||    
T  31694698 gtagcttgagtattcatccgggagctacaaagatgtattatgatctgaagaagttgttttggtggtccggtttgaaacgtga 31694779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 44777964 - 44777780
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||| | || |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||| ||||    
T  44777964 ttcaaggttgatgatcagggtgtgctaagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 44777865  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| ||||| |||||||||||||||||||||  ||| |||||||| |||||    
T  44777864 gtagcttaagcattcatccgggagctacgaagatgtatcacgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 44777780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 13299889 - 13300064
Alignment:
Q  6 tttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctg 105  Q
    ||||| ||||||||||||| | || || |||||||   | | ||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||    
T  13299889 tttgttgatttaatgattgctggttatgaaactgagaatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattcctg 13299988  T
Q  106 acaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaa 181  Q
    |  |  |||   ||||||  |||||||| || |||||||||||||||||||||||||| || ||||||||||||||    
T  13299989 atgatgatggtttgaaaaagttgattttagaggaaagtcacaagagtagcttgagtattcacccgggagctacgaa 13300064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 13310547 - 13310722
Alignment:
Q  6 tttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctg 105  Q
    ||||| ||||||||||||| | || || |||||||   | | ||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||    
T  13310547 tttgttgatttaatgattgctggttatgaaactgagaatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtattcctg 13310646  T
Q  106 acaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaa 181  Q
    |  |  |||   ||||||  |||||||| || |||||||||||||||||||||||||| || ||||||||||||||    
T  13310647 atgatgatggtttgaaaaagttgattttagaggaaagtcacaagagtagcttgagtattcacccgggagctacgaa 13310722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 16835922 - 16836107
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga-ttgattttggaagaaagtcacaag 149  Q
    ||||| |||||||| || || || || || |||||||| |||||||| |||||||||||  | || || |||| | || ||||| || ||||||||||||    
T  16835922 ttcaaagttgatgatcagggagtattaagattcagaggtagaatttgtattcctgacaatgaaga-atcaaaaaagttaattttagaggaaagtcacaag 16836020  T
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    |||||||||||||| ||||| ||||||||||||||||| || || ||||||||| |||||||||||   ||||||||||||||||||    
T  16836021 agtagcttgagtattcatcccggagctacgaagatgtatcatgagttgaaaaagttgttttggtggtccggtttgaagcgtgatgtc 16836107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 15248820 - 15248670
Alignment:
Q  85 gaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaaga 183  Q
    ||||||||||||| ||||||||| || |||||||||| ||||| |||| | ||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  15248820 gaggcagaatttgtattcctgacgacgatgagatgaagaagat-gattcttgaagaaagtcatagaagtagcttgagtattcatccgggagctacgaaga 15248722  T
Q  184 tgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| || || ||||| ||| |||||||||||  ||| ||||| ||||||||    
T  15248721 tgtatcatgatttgaagaagttgttttggtggtctgggttgaaacgtgatgt 15248670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 47124664 - 47124497
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||||||||||||||||| ||| ||||||||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  47124664 gatttcaaagttgatgatcagggtgtgttgaggttcagaggtagagtttgcattcctgacaatgaggagttgaagaagttgattcttgaggagagtcaca 47124565  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || ||||| || |||||||| || ||||| |||||||||||||||    
T  47124564 agagtaggttgagtattcacccaggggctacaaaaatgtaccatgatttgaagaagctgttttggtgg 47124497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 12360029 - 12360135
Alignment:
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttga 225  Q
    |||||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||||||   |||||||    
T  12360029 ttgattttagaggaaagtcacaagagtagcttgagtattcatccgggagctacgaaaatgtatcatgatttgaagaagctgttttggtggtccggtttga 12360128  T
Q  226 agcgtga 232  Q
    |||||||    
T  12360129 agcgtga 12360135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 16827565 - 16827799
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| ||||||| ||||||||| |   || |||||||||||||| || |||||||||||||||||||| | |||||| ||    
T  16827565 tcaagtttgttgatttgatggttgctagtaatgaaactgaagataatgacttcaaggttgatgatcaaggtgtgttgaggttcagaggaaaaatttgtat 16827664  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    || ||| ||  ||||  ||||||  |||||||| || ||||  ||||| |||||||| ||||| |||| ||||||||| || ||||| || || |||||     
T  16827665 tcatgataatgatgatttgaaaaagttgattttagaggaaacccacaaaagtagcttaagtattcatcagggagctacaaaaatgtatcatgatttgaag 16827764  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||  ||| ||||| ||||||||    
T  16827765 aaattgttttggtggtctgggttgaaacgtgatgt 16827799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 235
Target Start/End: Complemental strand, 13942737 - 13942557
Alignment:
Q  55 aggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtag 154  Q
    |||||||||| || |||||| | || |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||| ||||||||    
T  13942737 aggttgatgatcagggtgtgctaagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataagagtag 13942638  T
Q  155 cttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| || || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| |||||    
T  13942637 cttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 13942557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 10384688 - 10384521
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  10384688 gattttaaggttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 10384589  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||| || ||||| ||  |||||||||||    
T  10384588 agagtaggttgagtattcacccgggggctacaaagatgtaccatgatttgaagaaattgttttggtgg 10384521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 28755038 - 28754871
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  28755038 gatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 28754939  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || ||||| || |||||||| || ||||| || ||||||||||||    
T  28754938 agagtaggttgagtattcacccaggggctacaaaaatgtaccatgatttgaagaaactgttttggtgg 28754871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 15209564 - 15209414
Alignment:
Q  85 gaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagat 184  Q
    |||||||||||||  ||| |||| || |||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||||||| |||||||||||    
T  15209564 gaggcagaatttgttttcttgacgacgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggtgctacgaagat 15209465  T
Q  185 gtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| || || ||||| ||| |||||||||||  ||| ||||| ||||||||    
T  15209464 gtatcatgatttgaagaagttgttttggtggtctgggttgaaacgtgatgt 15209414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 16329069 - 16329211
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  ||||| |||| |  |||||| | || || |||||||    
T  16329069 gattttaaggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatgagttgaagaagttgattcttgaggagagtcaca 16329168  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtacca 190  Q
    ||||||| |||||||| || |||||  |||| |||||||||||    
T  16329169 agagtaggttgagtattcacccggggtctacaaagatgtacca 16329211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 16692856 - 16692687
Alignment:
Q  66 cacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatcc 165  Q
    |||||||||||||| ||| ||||  | ||||||||||||||| |    |||||||||| | ||||| | ||||| ||||| |  |||||||||||||| |    
T  16692856 cacggtgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaaaaaaatgattcttgaagagagtcatagaagtagcttgagtattc 16692757  T
Q  166 atccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| |||||||||||||||| || ||||| || ||| | || ||||||  |||||||||||| |||||    
T  16692756 atccgagagctacgaagatgtatcaggacttaaagaagattttctggtggtctggtttgaagcgagatgt 16692687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 15234282 - 15234128
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || | | |||||| |||||||||| | | || |||||||||||||| || ||||||||||| ||| |||  |||||||  ||||    
T  15234282 aagtttgtggatttgttggtggctagtaaccaaactgaagatagtgacttcaaggttgatgatcaaggtgtgttgagattccgagtaagaatttctattc 15234183  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagctt 157  Q
    |||| ||  ||||| ||||||  |||||||| |||||||||||||  ||||||||    
T  15234182 ctgataatgatgagttgaaaacgttgattttagaagaaagtcacagaagtagctt 15234128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 11960584 - 11960745
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | ||||| |||||| | ||||    
T  11960584 aaggttgatgatcagggtgtgctgaggttcagaggaagattttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtcacgatagta 11960683  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | |||||||| || || || ||||  ||||||||||| || ||||| || ||||||||||||    
T  11960684 gtttgagtattcacccaggggctataaagatgtaccatgatttgaagaaactgttttggtgg 11960745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 16337927 - 16338088
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | || || ||||| |||||||    
T  16337927 aaggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcataagagta 16338026  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | |||||||| || | ||| ||||| ||||||||||| ||  |||| || ||||||||||||    
T  16338027 ggttgagtattcacctgggggctacaaagatgtaccatgatctgaagaaactgttttggtgg 16338088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 12359891 - 12359994
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||||||| ||||| |||||   ||||| | | | || |||||||||||||| || ||||||||||| |||||||| |||||||||||||    
T  12359891 aagtttgttgatttaatggttgttggtaatggcactgaggatagtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattc 12359990  T
Q  103 ctga 106  Q
    ||||    
T  12359991 ctga 12359994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 16372144 - 16371983
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| ||| |  || ||||| ||||| || ||||||||||| ||| ||| | ||||||| ||||||||  |  | |||||||| | |    
T  16372144 tagtaatcagactgaagatggtggctttaaggtcgatgaccatggtgtgttgagattccgagcccgaatttgtattcctgatgataaagagatgaagaaa 16372045  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | ||||| ||||| |  |||||||||||||| || ||||||||||||||||||||    
T  16372044 atgattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaagatgta 16371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 16411714 - 16411889
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| |||||  | ||| | || ||||| |||| | ||||| ||||| |  |||||||||    
T  16411714 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagaggttaagaagat-gattcttgaagagagtcatagaagtagcttg 16411812  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| ||||||||||||||||||||||| ||||| || || ||| | || ||||||  ||||||||| || |||||    
T  16411813 agtattcatccgggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatgt 16411889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 15347686 - 15347852
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  15347686 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattctcgaagagagtcatagaagtagcttgagtattcat 15347784  T
Q  168 ccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||||||||||||| || || || ||| | || ||||||  ||||||||| || |||||    
T  15347785 ccgggagctacgaagatgtaccatgatttaaagaagattttctggtggtctggtttgaaacgagatgt 15347852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 187
Target Start/End: Complemental strand, 10906910 - 10906781
Alignment:
Q  58 ttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagct 156  Q
    ||||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||    
T  10906910 ttgatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagct 10906812  T
Q  157 tgagtatccatccgggagctacgaagatgta 187  Q
    ||||||| |||||||||||||||||||||||    
T  10906811 tgagtattcatccgggagctacgaagatgta 10906781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 12499005 - 12498819
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| ||| || || || || ||||| || ||||||||||| ||| ||||  | ||||||||    
T  12499005 tcaagtttgtagacttgttggttgctagtaattagactgaagttggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcggatttgcat 12498906  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||| |  | |||||||| | | ||||| | || || ||||| |  |||||||||||||| || ||||||||||||||||||||    
T  12498905 tcctgacgatgaagagatgaagaaaatgattcttgaggagagtcatagaagtagcttgagtattcacccgggagctacgaagatgta 12498819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 215
Target Start/End: Complemental strand, 17490539 - 17490393
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    ||||||||||||||  |||| || ||||| ||||| ||| |  |||||||||| | | ||||| | ||||| ||||| |  |||| ||||||||| ||||    
T  17490539 ggtgtgttgaggtttcgaggtaggatttgtattccagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttgagtattcatc 17490440  T
Q  169 cgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||||||||| || ||  | || ||| |||||||||||    
T  17490439 cgggagctacgaagatgtatcatgatctaaagaagttgttttggtgg 17490393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 16806364 - 16806533
Alignment:
Q  66 cacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatcc 165  Q
    |||||||||||||| ||| |||   | ||||||||||||||| |    |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |    
T  16806364 cacggtgtgttgagattccgagatcggatttgcattcctgacgatccagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattc 16806463  T
Q  166 atccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||  ||||||||||||||||| ||||| || || ||| | || ||||||  ||||||||| ||||||||    
T  16806464 atctaggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgtgatgt 16806533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 5424362 - 5424489
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  5424362 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 5424460  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  5424461 agtattcatccgggagctacgaagatgta 5424489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 6601422 - 6601307
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| |||| |||||||||||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  6601422 gtgttgagattccgagggagaatttgcattcccgacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 6601324  T
Q  171 ggagctacgaagatgta 187  Q
    |||||||||||||||||    
T  6601323 ggagctacgaagatgta 6601307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 15588824 - 15588951
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  15588824 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 15588922  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  15588923 agtattcatccgggagctacgaagatgta 15588951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 16636471 - 16636344
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  16636471 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 16636373  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  16636372 agtattcatccgggagctacgaagatgta 16636344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 16756029 - 16756144
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| |||| |||||||||||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  16756029 gtgttgagattccgagggagaatttgcattccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 16756127  T
Q  171 ggagctacgaagatgta 187  Q
    |||||||||||||||||    
T  16756128 ggagctacgaagatgta 16756144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 26791831 - 26791958
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  26791831 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 26791929  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  26791930 agtattcatccgggagctacgaagatgta 26791958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 43163795 - 43163668
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  43163795 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 43163697  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  43163696 agtattcatccgggagctacgaagatgta 43163668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 48426145 - 48426018
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  48426145 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 48426047  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  48426046 agtattcatccgggagctacgaagatgta 48426018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 14580315 - 14580529
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||||||||||||||  || ||  ||||||||| | ||||| | | ||||||||| | ||||| || ||||| || |||||  |||| |||||||| ||    
T  14580315 tcaagtttgtggatttgttggttactagtaatcagattgaagatagtgatttcaagatcgatgatcaaggtgtattaaggtttcgaggtagaatttgtat 14580414  T
Q  101 tcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaa 199  Q
    ||| ||| |  | ||||| || ||||| |||| | || || |||||||  |||||||||||||| || || ||||||||||| ||||| || || |||||    
T  14580415 tccagacgatgaagagattaagaagat-gattcttgaggagagtcacagaagtagcttgagtattcacccaggagctacgaaaatgtatcatgatttgaa 14580513  T
Q  200 aaagctgttttggtgg 215  Q
     ||| |||||||||||    
T  14580514 gaagttgttttggtgg 14580529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 10006208 - 10006171
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  10006208 agtagcttgagtattcatccgggagctacgaagatgta 10006171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 15724456 - 15724493
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  15724456 agtagcttgagtattcatccgggagctacgaagatgta 15724493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 20061576 - 20061613
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20061576 agtagcttgagtattcatccgggagctacgaagatgta 20061613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 13253388 - 13253261
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  13253388 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 13253290  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  13253289 agtattcacccgggagctacgaagatgta 13253261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 187
Target Start/End: Original strand, 14875898 - 14876057
Alignment:
Q  27 agtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagat 126  Q
    |||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||||||||  |  | |||||||| | |     
T  14875898 agtaatcagactgaagatggtgactt-aaggtcgatgaccatggtgtgttgagattccgaggttgaatttgtattcctgatgatgaagagatgaagaaaa 14875996  T
Q  127 tgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||| | ||| | ||| | |  |||||||||||||| || ||||||||||||||||||||    
T  14875997 tgattcttgaaaagagttatagaagtagcttgagtattcacccgggagctacgaagatgta 14876057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 15062367 - 15062315
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||| ||||| | ||||||||||||||| || ||||||||||||||||||||    
T  15062367 gaagagagtcataggagtagcttgagtattcacccgggagctacgaagatgta 15062315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 15339967 - 15339840
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  15339967 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 15339869  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  15339868 agtattcacccgggagctacgaagatgta 15339840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 53384462 - 53384577
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| |||| |||||||| ||||| ||| || | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  53384462 gtgttgagattccgagggagaatttgtattccagacgacgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 53384560  T
Q  171 ggagctacgaagatgta 187  Q
    |||||||||||||||||    
T  53384561 ggagctacgaagatgta 53384577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 15401947 - 15402076
Alignment:
Q  58 ttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagct 156  Q
    ||||||| || ||||||||||| |||  ||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||    
T  15401947 ttgatgatcaaggtgtgttgagattccaaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagct 15402045  T
Q  157 tgagtatccatccgggagctacgaagatgta 187  Q
    ||||||| || ||||||||||||||||||||    
T  15402046 tgagtattcacccgggagctacgaagatgta 15402076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 16491703 - 16491740
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  16491703 agtaacttgagtattcatccgggagctacgaagatgta 16491740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 15015255 - 15015343
Alignment:
Q  127 tgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||| ||||||||| |||||  ||||  |||||||| |||||||||||||| || ||||| || || ||||| ||| | |||||||||    
T  15015255 tgattatggaagaaattcacagaagtaatttgagtattcatccgggagctacaaaaatgtatcatgatttgaagaagttattttggtgg 15015343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 21680094 - 21680328
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||  ||  |||||||||| |||| | | | |||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  21680094 tcaagtttgtggatttaatagttaatagtaatcaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagaggcagaatttgcat 21680193  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  21680194 tcctgacaacgatgagataaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccgggagctacgaagatgtatcacgatttgaaa 21680293  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||  ||||||||||||||||||    
T  21680294 aagctgttttggtggcctggtttgaagcgtgatgt 21680328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 24619613 - 24619842
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||| ||| ||| | ||||| | ||||| | | ||||||||||||||||||  || |||||  ||||||||||||| |||||||| ||||    
T  24619613 aagtttgttgatttgatggttgctggtaatgacactgaggatagcgatttcaaggttgatgttcagggtgttctgaggttcagaggaagaatttgtattc 24619712  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  ||||| ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||    
T  24619713 ctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccgggagctacgaaaatgtaccatgatttgaagaa 24619812  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
     || |||||||||   |||||||| |||||    
T  24619813 actattttggtggtccggtttgaaacgtga 24619842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 24715844 - 24716073
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||| ||| ||| | ||||| | ||||| | | ||||||||||||||||||  || |||||  ||||||||||||| |||||||| ||||    
T  24715844 aagtttgttgatttgatggttgctggtaatgacactgaggatagcgatttcaaggttgatgttcagggtgttctgaggttcagaggaagaatttgtattc 24715943  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  ||||| ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||    
T  24715944 ctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccgggagctacgaaaatgtaccatgatttgaagaa 24716043  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
     || |||||||||   |||||||| |||||    
T  24716044 actattttggtggtccggtttgaaacgtga 24716073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 24748872 - 24749101
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||| ||| ||| | ||||| | ||||| | | ||||||||||||||||||  || |||||  ||||||||||||| |||||||| ||||    
T  24748872 aagtttgttgatttgatggttgctggtaatgacactgaggatagcgatttcaaggttgatgttcagggtgttctgaggttcagaggaagaatttgtattc 24748971  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  ||||| ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||    
T  24748972 ctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccgggagctacgaaaatgtaccatgatttgaagaa 24749071  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
     || |||||||||   |||||||| |||||    
T  24749072 actattttggtggtccggtttgaaacgtga 24749101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 21890075 - 21890289
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| ||||||||||||| ||  | | || |||||||||| ||| || |||||||||||||||||||| |||||||||||    
T  21890075 tcaagtttgtcgatttaatggttgctagtaatcaaactaaatatagtgacttcaaggttggtgatcagggtgtgttgaggttcagaggaagaatttgcat 21890174  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| |   ||||| ||||||  |||| |||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| || || |||||     
T  21890175 tcctgatagtgatgagttgaaaaagttgagtttggaagaaagccacaaaagtagctttagtattcatccgggagctacaaagatgtatcatgatttgaag 21890274  T
Q  201 aagctgttttggtgg 215  Q
    ||  |||||||||||    
T  21890275 aaattgttttggtgg 21890289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 21831102 - 21831311
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||||||| ||| ||| || |||||||||||||| || ||||||||||| ||| ||||||||||||| || ||||| ||  ||||| ||||||      
T  21831102 tagtaatcaaactaaagatggtgacttcaaggttgatgatcaaggtgtgttgagattctgaggcagaatttgtatccctgataatgatgagttgaaaaag 21831201  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttga 225  Q
    |||||||| |||||||||||||| ||||| || ||||| |||||||||||||| |||||||| || |||||||| ||  |||||||||||   || ||||    
T  21831202 ttgattttagaagaaagtcacaaaagtagtttaagtattcatccgggagctacaaagatgtatcatgacttgaagaaattgttttggtggtccggattga 21831301  T
Q  226 agcgtgatgt 235  Q
    ||||||||||    
T  21831302 agcgtgatgt 21831311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 22463001 - 22462778
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||||||||||||| ||| | |||||||| | ||   | | ||||||||||||||| |||| ||||||||||| || |||||||||||||| ||||    
T  22463001 aagtttgtggatttaatggttgctggtaatcaagcagagaatagtgatttcaaggttgat-aacaaggtgtgttgagatttagaggcagaatttgtattc 22462903  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  | ||  |||| |  |||||||||||||||||||| ||||| | ||||||||| |||||||||||||| || ||||| || |||||||| ||    
T  22462902 ctgacaatgaagaattgaagaagttgattttggaagaaagtcataagagcaacttgagtattcatccgggagctacaaaaatgtatcatgacttgaagaa 22462803  T
Q  203 gctgttttggtgggttggtttgaag 227  Q
    |||||||||||||  ||||||||||    
T  22462802 gctgttttggtggtctggtttgaag 22462778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 17268700 - 17268885
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||||||||    
T  17268700 ttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcacaaga 17268799  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    |||||||||| || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| ||||||    
T  17268800 gtagcttgagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgtc 17268885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 21497100 - 21496891
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||| ||||||||| ||| || |||||||||||||| || |||||||||||||||||||| ||||||||||||||| | ||  ||||  ||||||      
T  21497100 tagtaatgaaactgaagatggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctaataaggatgatttgaaaaag 21497001  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttga 225  Q
    |||||||| |||||||||||||  |||||||| ||||| ||||| |||||||| |||||||| || ||| |||| ||  |||||||||||  ||| ||||    
T  21497000 ttgattttagaagaaagtcacagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacctgaagaaattgttttggtggtctgggttga 21496901  T
Q  226 agcgtgatgt 235  Q
    | ||||||||    
T  21496900 aacgtgatgt 21496891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 22235238 - 22235467
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||| ||| ||||| ||||| || |||| | | | || || ||||| ||||| || | |||||||||||||||||| |||||||| ||||    
T  22235238 aagtttgttgatttgatggttgttggtaatgaagctgaggatagtgactttaaggtcgatgatcaggatgtgttgaggttcagaggaagaatttgtattc 22235337  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
     ||| ||  | ||| ||||||  || ||||| || |||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| || ||||||||    
T  22235338 atgataatgaagagttgaaaaagttaattttagaggaaagtcacaagagtagcttaagtattcatctgggagctacaaagatgtaccatgatttgaaaaa 22235437  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||| ||||  |||||||||||||||    
T  22235438 gctgttttagtggtctggtttgaagcgtga 22235467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 20822480 - 20822291
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    |||||||||| |||||| ||| |||||||| ||||||||||| ||||| ||||| || ||||||||||||||  |||| |||||  | ||  |||| |      
T  20822480 tagtaatcaagctgaagatggtgatttcaaagttgatgaacaaggtgtattgagatttagaggcagaatttgtgttcccgacaatgaagaattgaagaag 20822381  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||| ||||||||||| |||||||  |||||||| ||||||||||||||||| ||||| || |||||||| ||| |||||||||||    
T  20822380 ttgattttagaagaaagtcataagagtaatttgagtattcatccgggagctacgaaaatgtatcatgacttgaagaagttgttttggtgg 20822291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 21563291 - 21563503
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||||||||||| ||| || |||||||||||||| ||  |||||||||| ||| ||  || |||||| ||||    
T  21563291 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttcaaggttgatgatcaacgtgtgttgagattccgacacataatttgtattc 21563390  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    || | || |||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||| |||||||| |||||||| || |||||||| ||    
T  21563391 cttataattatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacttgaagaa 21563490  T
Q  203 gctgttttggtgg 215  Q
      |||||||||||    
T  21563491 attgttttggtgg 21563503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 20774809 - 20774585
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||||||||||||| |||| ||||||||| | || |   | ||||||||||||||||| || ||||||||||| || |||||||||||||| || |    
T  20774809 aagtttgtggatttaatggttgtgagtaatcaagccgaggagagtgatttcaaggttgatgagcaaggtgtgttgagatttagaggcagaatttgtatcc 20774710  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  | ||  |||| |  |||||||| |||||| |||| ||||| | ||||||||| || | ||||||||| || ||||| || |||||||| ||    
T  20774709 ctgacaatgaggaattgaagaagttgattttagaagaaggtcataagagcaacttgagtattcacctgggagctacaaaaatgtatcaagacttgaagaa 20774610  T
Q  203 gctgttttggtgggttggtttgaag 227  Q
    | |||||||||||  ||||||||||    
T  20774609 gttgttttggtggtctggtttgaag 20774585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 24797760 - 24797927
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || ||||| |||||||||||||| ||| ||||||||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  24797760 gatttcaaagttgatgatcaaggtgttttgaggttcagaggtagagtttgcattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 24797859  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||||||||| || |||||||| || ||||| || ||||||||||||    
T  24797860 agagtaggttgagtattcacccgggagctacaaaaatgtaccatgatttgaagaaactgttttggtgg 24797927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 227
Target Start/End: Original strand, 28894305 - 28894484
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||||||||||| || ||||||||||| || |||||||||||||| || ||||||||  | ||  |||| |  |||||||| |||||| |||| |    
T  28894305 gatttcaaggttgatgagcaaggtgtgttgagatttagaggcagaatttgtatccctgacaatgaggaactgaagaagttgattttagaagaaggtcata 28894404  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaag 227  Q
    |||| | ||||||||| || ||||||||||| || ||||| || |||||||| ||| |||||||||||  ||||||||||    
T  28894405 agagcaacttgagtattcacccgggagctacaaaaatgtatcaagacttgaagaagttgttttggtggtctggtttgaag 28894484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 227
Target Start/End: Original strand, 28915776 - 28915955
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||||||||||| || ||||||||||| || |||||||||||||| || ||||||||  | ||  |||| |  |||||||| |||||| |||| |    
T  28915776 gatttcaaggttgatgagcaaggtgtgttgagatttagaggcagaatttgtatccctgacaatgaggaactgaagaagttgattttagaagaaggtcata 28915875  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaag 227  Q
    |||| | ||||||||| || ||||||||||| || ||||| || |||||||| ||| |||||||||||  ||||||||||    
T  28915876 agagcaacttgagtattcacccgggagctacaaaaatgtatcaagacttgaagaagttgttttggtggtctggtttgaag 28915955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 227
Target Start/End: Original strand, 28923131 - 28923310
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||||||||||| || ||||||||||| || |||||||||||||| || ||||||||  | ||  |||| |  |||||||| |||||| |||| |    
T  28923131 gatttcaaggttgatgagcaaggtgtgttgagatttagaggcagaatttgtatccctgacaatgaggaactgaagaagttgattttagaagaaggtcata 28923230  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaag 227  Q
    |||| | ||||||||| || ||||||||||| || ||||| || |||||||| ||| |||||||||||  ||||||||||    
T  28923231 agagcaacttgagtattcacccgggagctacaaaaatgtatcaagacttgaagaagttgttttggtggtctggtttgaag 28923310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 37542744 - 37542911
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||  ||||||||||||| ||| |||| |||||||||||| | ||| |||| | ||||||| | || || |||||||    
T  37542744 gatttcaaagttgatgatcagggtgtactgaggttcagaggtagagtttgtattcctgacaacgaagagttgaagaaattgattcttgaggagagtcaca 37542843  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || ||||||||||| |||||||| || ||||| || ||||||||||||    
T  37542844 agagtaggttgagtattcacccaggagctacgaaaatgtaccatgatttgaagaaactgttttggtgg 37542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 26738045 - 26738277
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  |||||| ||||||||| ||||||| ||| ||||| ||  | ||||| || |||| |||||| ||  |||| |||||||| ||||    
T  26738045 aagtttgtggacttgttgattgctagtaatcagactgaagatggtgattttaaaatcgatgatcatggtgcgttgagatttcgaggaagaatttgtattc 26738144  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    ||||| |  |||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||| |||||||||||| ||||| || ||  |||| ||    
T  26738145 ctgacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatcagggagctacgaaaatgtatcatgatctgaagaa 26738244  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
    | |||||||||||  ||| ||||| ||||||||    
T  26738245 gttgttttggtggtctggattgaaacgtgatgt 26738277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 23079455 - 23079619
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||  ||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | ||||| |||||||| |    
T  23079455 ttcaaggttgatgatcagggtgttctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtcacaaaa 23079554  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| |||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||    
T  23079555 gtagtttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaactgttttggtgg 23079619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 20343287 - 20343120
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | || || |||||||    
T  20343287 gattttaaggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcaca 20343188  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || || ||||| || ||||| || ||||||||||||    
T  20343187 agagtaggttgagtattcacccgggggctacaaaaatataccatgatttgaagaaactgttttggtgg 20343120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18776840 - 18776606
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| |||||  || ||| ||||||||| |||||||  |  || || || || || || |||||||||||||| ||| ||||  | ||||||||    
T  18776840 tcaagtttgtagatttgttggttgctagtaatcagactgaagacgatgactttaaagtcgacgatcacggtgtgttgagattccgaggtcggatttgcat 18776741  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||||||| |    |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||||||||||||||||||| ||||| || ||     
T  18776740 tcctgacgatgcagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgtatcacgatttaaag 18776641  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| | || |||||| |||||||||| || |||||    
T  18776640 aagattttctggtggtttggtttgaaacgagatgt 18776606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 14886354 - 14886521
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || || ||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  14886354 gatttcaaagttgatgatcagggggtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 14886453  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || ||||| || || ||||| || ||||||||||||    
T  14886454 agagtaggttgagtattcacccgggggctacaaaaatgtatcatgatttgaagaaactgttttggtgg 14886521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 25849080 - 25848913
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||  ||||||||||||| ||| | || |||||||||||  ||||| |||| |  |||||| | || || ||||| |    
T  25849080 gattttaaggttgatgatcagggtgttctgaggttcagaggaagagtatgtattcctgacaatgatgagttgaagaagttgattcttgatgatagtcata 25848981  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || |||||||| || ||||| ||  |||||||||||    
T  25848980 agagtaggttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaattgttttggtgg 25848913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 23441280 - 23441094
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || || || ||||| || ||||||||||| ||| ||||  | ||||||||    
T  23441280 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcggatttgcat 23441181  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    || |||| |  | |||||||| | | ||||| | || || ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  23441180 tcgtgacgatgaagagatgaagaaaatgattcttgaggagagtcatagaagtagcttgagtattcatccgggagctacgaagatgta 23441094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 20467415 - 20467627
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| |||||| | |||| | | ||||| ||||||| | | || || ||||| ||||| || || |||||| | ||  |||||| |||||| ||||    
T  20467415 aagtttgtagatttatttattggtggaaatcagactgaagatagtgactttaaggtcgatgatcagggagtgttgcgatttcgaggcaaaatttgtattc 20467514  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    ||||  |  |||||||||| ||||| |||| | ||||| ||| |||  |||||||||||||| ||||||||||||||||||||||| || || ||||| |    
T  20467515 ctgatgatgatgagatgaagaagat-gattcttgaagagagtaacagaagtagcttgagtattcatccgggagctacgaagatgtatcatgatttgaaga 20467613  T
Q  202 agctgttttggtgg 215  Q
    || || ||||||||    
T  20467614 agttggtttggtgg 20467627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 20800518 - 20800332
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || || || ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  20800518 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 20800419  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||| |  | |||||||| | | ||||| | ||||| ||||| |  |||| | ||||||| || ||||||||||||||||||||    
T  20800418 tcctgacgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtaacctgagtattcacccgggagctacgaagatgta 20800332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 23517596 - 23517410
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||| || ||| ||||||||| || |||| ||| || || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  23517596 tcaagtttgtagacttattggttgctagtaatcagacagaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 23517497  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||| |  |  | |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || |||||||||| |||||||||    
T  23517496 tcctaaagatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcacccgggagctatgaagatgta 23517410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 16357513 - 16357386
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  16357513 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 16357415  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  16357414 agtattcatccgggagctacgaagatgta 16357386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 235
Target Start/End: Original strand, 21338687 - 21338847
Alignment:
Q  75 ttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggag 174  Q
    ||||| ||| |||| |||||||| ||||  ||| |  |||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || |||||||    
T  21338687 ttgagattccgaggtagaatttgtattctagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcacccgggag 21338786  T
Q  175 ctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| ||||| || || ||||| ||| |||||| ||||  ||| ||||| ||||||||    
T  21338787 ctacgaaaatgtatcatgatttgaagaagttgttttcgtggtctgggttgaaacgtgatgt 21338847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 22349359 - 22349307
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||| ||||||  ||||||||||||||| |||||||||||||||||||||||    
T  22349359 gaagagagtcacgggagtagcttgagtattcatccgggagctacgaagatgta 22349307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 27519418 - 27519291
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  27519418 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 27519320  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  27519319 agtattcatccgggagctacgaagatgta 27519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 29475448 - 29475575
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  29475448 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 29475546  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  29475547 agtattcatccgggagctacgaagatgta 29475575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 34567505 - 34567378
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  34567505 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 34567407  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  34567406 agtattcatccgggagctacgaagatgta 34567378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 40709791 - 40709616
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  40709791 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 40709693  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| || |||||||||||||||||||| ||||| || || ||| | || ||||||  ||||||||| || |||||    
T  40709692 agtattcacccgggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatgt 40709616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 41771853 - 41771726
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  41771853 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 41771755  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  41771754 agtattcatccgggagctacgaagatgta 41771726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 19770962 - 19770844
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  19770962 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 19770864  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  19770863 ccgggagctacgaagatgta 19770844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 22135738 - 22135552
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| |||||  || ||| ||||||||| |||||||   | ||||| ||  | ||||| || ||||||||||| ||| |||  || ||||| ||    
T  22135738 tcaagtttgtagatttgttggttgctagtaatcagactgaagaaagtgattttaaaatcgatgatcaaggtgtgttgagattccgagaaaggatttgtat 22135639  T
Q  101 tcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  22135638 tccagacaatgaagagattaagaagat-gattctagaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgta 22135552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 22503684 - 22503533
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||  ||||||||||||| ||| | || |||||||||||  ||||| |||| |  |||||| | || || ||||| |    
T  22503684 gattttaaggttgatgatcagggtgttctgaggttcagaggaagagtatgtattcctgacaatgatgagttgaagaagttgattcttgaggagagtcata 22503585  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaa 199  Q
    ||||||| |||||||| || || || ||||| || |||||||| || |||||    
T  22503584 agagtaggttgagtattcagcccggggctactaaaatgtaccatgatttgaa 22503533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 27611356 - 27611238
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  27611356 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 27611258  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  27611257 ccgggagctacgaagatgta 27611238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 187
Target Start/End: Original strand, 14999124 - 14999241
Alignment:
Q  70 gtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    |||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| ||||    
T  14999124 gtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcatc 14999222  T
Q  169 cgggagctacgaagatgta 187  Q
    |||||||||||||||||||    
T  14999223 cgggagctacgaagatgta 14999241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 27684865 - 27684902
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27684865 agtagcttgagtattcatccgggagctacgaagatgta 27684902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 22332262 - 22332389
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  22332262 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 22332360  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  22332361 agtattcacccgggagctacgaagatgta 22332389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 23574658 - 23574621
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| || ||||||||||||||||||||    
T  23574658 agtagcttgagtattcacccgggagctacgaagatgta 23574621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 23574799 - 23574694
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| | ||| | ||| ||||| ||||| ||||| || ||||||||||| ||| ||||| ||||||| ||    
T  23574799 tcaagtttgtagacttgttggttgctagtaatcagattgaggatggtgattttaaggtcgatgaccatggtgtgttgagattccgaggccgaatttgtat 23574700  T
Q  101 tcctga 106  Q
    ||||||    
T  23574699 tcctga 23574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 25424189 - 25424045
Alignment:
Q  70 gtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 169  Q
    |||||||||||||  |||| || ||||| ||||| ||| |  |||||||||| | | ||||| | ||||| ||||| |  ||||  |||||||| |||||    
T  25424189 gtgtgttgaggtttcgaggtaggatttgtattccagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaa-ttgagtattcatcc 25424091  T
Q  170 gggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||||||||||||| || ||  | || ||| |||||||||||    
T  25424090 gggagctacgaagatgtatcatgatctaaagaagttgttttggtgg 25424045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 37290961 - 37290998
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  37290961 agtagcttgagtattcatccgggagccacgaagatgta 37290998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 27667877 - 27667992
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||  |||| |||||||||||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  27667877 gtgttgagatttcgaggaagaatttgcattccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 27667975  T
Q  171 ggagctacgaagatgta 187  Q
    ||| |||||||||||||    
T  27667976 ggatctacgaagatgta 27667992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 113728 - 113494
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||| |||||||||||||| ||  ||||||||||||||||| | | |||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||    
T  113728 tcaagcttgtggatttaatggttaatagtaatcaaactgaagatagtgattgcaaggttgatgaacacggtgtgttgagattcggaggcagaatttgtat 113629  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    || ||||||| |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||     
T  113628 tcttgacaacgatgagatgaaaaggctgattttggaagaaagtcacaagaatagcttgagtatccatccgggagctacgaagatgtatcacgacttgaag 113529  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| |||||||||  | ||||||||||||||||    
T  113528 aagctattttggtggtctagtttgaagcgtgatgt 113494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 95139 - 95365
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||| |||||||||| |||||| ||| |||||||| |||||||| || ||||| ||||| || ||||| ||||||||  |    
T  95139 tcaagtttgtggatttaatggttgatagtaatcaagctgaagatggtgatttcaaagttgatgagcaaggtgtattgagatttagaggtagaatttgtgt 95238  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||| |||||  | ||  | || |  || ||||| ||||||||||| ||||| |  |||||||| ||||||||||||||||| ||||| || ||||||||     
T  95239 tcccgacaatgaagaattaaagaagttaattttagaagaaagtcataagagcaatttgagtattcatccgggagctacgaaaatgtatcatgacttgaag 95338  T
Q  201 aagctgttttggtgggttggtttgaag 227  Q
    ||| |||||||||||  ||||||||||    
T  95339 aagttgttttggtggtctggtttgaag 95365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 109007 - 109134
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||  ||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  109007 gatgatcaaggtgtgttgagattccgaggaagaatttatattccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 109105  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| || ||||||||||||||||||||    
T  109106 agtattcacccgggagctacgaagatgta 109134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 147; Significance: 1e-77; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 49651 - 49885
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||  ||  ||||||| || |||| | | | |||||||| ||||||||||| |||||||||| ||||||| |||||||||||||    
T  49651 tcaagtttgtggatttaatagttaatagtaatgaagctgaggatagtgatttcaaagttgatgaacaaggtgtgttgaagttcagatgcagaatttgcat 49750  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  49751 tcctgataacgatgagatgaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccgggagctacgaagatgtatcacgatttgaaa 49850  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||  ||||||||||||||||||    
T  49851 aagctgttttggtggcctggtttgaagcgtgatgt 49885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 9584 - 9457
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || |||||| |||| ||| |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||||| ||||||||||    
T  9584 gatgatcaaggtgtggtgagattccgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagtcacaggagtagcttg 9486  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||||||||||||||||||    
T  9485 agtatccatccgggagctacgaagatgta 9457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 16046 - 15919
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || |||||| |||| ||| |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||||| ||||||||||    
T  16046 gatgatcaaggtgtggtgagattccgaggaagaatttgtattccagacaataaagagattaagaagat-gattcttgaagagagtcacaggagtagcttg 15948  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||||||||||||||||||    
T  15947 agtatccatccgggagctacgaagatgta 15919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 214
Target Start/End: Original strand, 879 - 966
Alignment:
Q  127 tgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtg 214  Q
    ||||| ||||||| |||||||| |||||||||||||| |||||||||||||| || ||||| || || ||||| ||| ||||||||||    
T  879 tgattctggaagagagtcacaaaagtagcttgagtattcatccgggagctacaaaaatgtatcatgatttgaagaagttgttttggtg 966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 44189 - 44089
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatg 234  Q
    ||||| |||||||  |||||||||||||| ||  ||||||||||||||||||| ||||| ||||| ||| | || ||||||  ||||||||| || ||||    
T  44189 gaagagagtcacagaagtagcttgagtattcactcgggagctacgaagatgtatcacgatttgaagaagattttctggtggtctggtttgaaacgagatg 44090  T
Q  235 t 235  Q
    |    
T  44089 t 44089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 20018 - 19804
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||  | |||||||| |||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  20018 tcaagtttgtggatttaatggttaatggtaatcaagctgaagatagtgatttcaaagttgatgaacaaggtgtgttgaggttcagaggcagaatttgcat 19919  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||  ||||||||||||  || ||||| || |||||||||||||||||||||||||| ||| ||||||||||||||||||| || || ||||||    
T  19918 tcctgacaatgatgagatgaaaaagttaattttagaggaaagtcacaagagtagcttgagtattcattcgggagctacgaagatgtatcatgatttgaaa 19819  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  19818 aagttgttttggtgg 19804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 24180 - 23966
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||  | |||||||| |||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  24180 tcaagtttgtggatttaatgttttattgtaatcaatctgaagatagtgatttcaaagttgatgaacaaggtgtgttgaggttcagaggcagaatttgcat 24081  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||  ||||||||||||  || ||||| || |||||||||||||||||||||||||| ||| ||||||||||||||||||| || || ||||||    
T  24080 tcctgacaatgatgagatgaaaaagttaattttagaggaaagtcacaagagtagcttgagtattcattcgggagctacgaagatgtatcatgatttgaaa 23981  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  23980 aagttgttttggtgg 23966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 34278 - 34123
Alignment:
Q  80 gttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacg 179  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34278 gttcagaggcagaatttgcattcctgacaacgatgagataaaaaggttgattttggaagaaagtcacaagagcagcttgagtatccatccgggagctacg 34179  T
Q  180 aagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||| ||||| ||||||||||| |||||||||  ||||||||||||||||||    
T  34178 aagatgtatcacgatttgaaaaagcttttttggtggtctggtttgaagcgtgatgt 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19852615 - 19852381
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||| |||||| || |||||||||||||||||||| |||||||||||    
T  19852615 tcaagtttgtggatttaatgattgctagtattcaaactgaagatggtgatttcaaggatgatgatcagggtgtgttgaggttcagaggaagaatttgcat 19852516  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  19852515 tcctgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 19852416  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||   |||||||| ||||||||    
T  19852415 aaattgttttggtggtccggtttgaaacgtgatgt 19852381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19858651 - 19858417
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||| |||||| || |||||||||||||||||||| |||||||||||    
T  19858651 tcaagtttgtggatttaatgattgctagtattcaaactgaagatggtgatttcaaggatgatgatcagggtgtgttgaggttcagaggaagaatttgcat 19858552  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  19858551 tcctgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 19858452  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||   |||||||| ||||||||    
T  19858451 aaattgttttggtggtccggtttgaaacgtgatgt 19858417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 48 - 232
Target Start/End: Complemental strand, 1267395 - 1267211
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||||||||||| || ||||||||||| |||||||| |||||||| |||||||||||  ||||| ||||||  |||||||| |||||||||||||    
T  1267395 gatttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagaaagtcaca 1267296  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||||| ||||| |||||||| ||||||||||| || |||||||||||||||||||||   |||||||| |||||    
T  1267295 agagtagcttgagtattcatccaggagctacaaagatgtaccatgatttgaaaaagctgttttggtggtccggtttgaaacgtga 1267211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 31416053 - 31416285
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||||||||||  | ||||| | ||||| | | | || |||||||||||||| || || || ||||| |||||||| |||||||| ||||    
T  31416053 aagtttgttgatttaatgattactggtaatgacactgaggatagtgacttcaaggttgatgatcagggcgtattgagattcagaggaagaatttgtattc 31416152  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  ||||| ||||||  |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||| ||    
T  31416153 ctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccgggagctacaaagatgtaccatgatttgaagaa 31416252  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||   |||||||||||||||||    
T  31416253 gctgttttggtggtccggtttgaagcgtgatgt 31416285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21841621 - 21841387
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||| ||||||| |||||||||  || ||||||||||||||||| || |||||||||||||||||||| || ||||||||    
T  21841621 tcaagtttgtggatttaatggttgctagtaattaaactgaagagggtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaaggatttgcat 21841522  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  21841521 tcctgataatgatgatttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 21841422  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||  ||| ||||| ||||||||    
T  21841421 aaattgttttggtggtctgggttgaaacgtgatgt 21841387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 23656131 - 23655900
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||||| ||||||| | | | || || ||||||||||| || |||||||||||||||||||| |||||||||||    
T  23656131 tcaagtttgttgatttgatggttgctggtaatgaaactgaggatagtgactttaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 23656032  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  ||||||  |||||| |||||||| |||||||||||||||| ||||| |||||||||||||| |||||||| || || |||||     
T  23656031 tcctgataatgatgatttgaaaaagttgattctggaagaaggtcacaagagtagcttaagtattcatccgggagctacaaagatgtatcatgatttgaag 23655932  T
Q  201 aagctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||||  ||| ||||| |||||    
T  23655931 aagctgttttggtggtctgggttgaaacgtga 23655900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 51 - 236
Target Start/End: Complemental strand, 22052017 - 22051832
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || || || ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  || ||||| || |||||||||||||    
T  22052017 ttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttagaggaaagtcacaaga 22051918  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    |||| |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||   ||||||||||||||||||    
T  22051917 gtaggttgagtattcatccgggagctacgaagatgtaccatgatttgaaaaagctgttttggtggtccggtttgaagcgtgatgtc 22051832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 20975278 - 20975459
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||||||||||  |  |||   ||||||  |||||||| || |||||||||||||    
T  20975278 ttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgatgatgatggtttgaaaaagttgattttagaggaaagtcacaaga 20975377  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| ||| ||||||||||||| ||||| || || ||||  |||||||||||||||   ||||||||||||||    
T  20975378 gtagcttgagtattcatacgggagctacgaaaatgtatcatgatttgaggaagctgttttggtggtccggtttgaagcgtga 20975459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 20985124 - 20985347
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||  ||  ||||||| ||||||||| ||| || |||||||||||||| || |||||||||||||| ||||| |||||||| ||    
T  20985124 tcaagtttgttgatttaatagttactagtaatgaaactgaagatggtgacttcaaggttgatgatcagggtgtgttgaggtttagaggaagaatttgtat 20985223  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||| | ||  ||||| ||||||  ||||||||||||||||||||||  |||| ||| ||||| || ||| ||||||| |||||||| || ||||||||     
T  20985224 tcctaaaaatgatgagttgaaaaagttgattttggaagaaagtcacagaagtatcttaagtattcacccgagagctacaaagatgtatcatgacttgaag 20985323  T
Q  201 aagctgttttggtgggttggtttg 224  Q
    ||  |||||||||||  |||||||    
T  20985324 aaattgttttggtggtctggtttg 20985347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 20389278 - 20389069
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||| ||||||||||| | | || |||||||||||||| || ||||||||||| ||| ||||||||||||| |||||||| ||  ||||| ||||||      
T  20389278 tagtattcaaactgaagatagtgacttcaaggttgatgatcaaggtgtgttgagattccgaggcagaatttgtattcctgataatgatgagttgaaaaag 20389179  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttga 225  Q
    |||||||| |||||||||||||   ||||||| ||||| |||||||||||||| |||||||| || |||||||| ||  |||||| ||||   || ||||    
T  20389178 ttgattttagaagaaagtcacatacgtagcttaagtattcatccgggagctacaaagatgtatcatgacttgaagaaattgttttagtggtccggattga 20389079  T
Q  226 agcgtgatgt 235  Q
    ||||||||||    
T  20389078 agcgtgatgt 20389069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 20009497 - 20009683
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||| |||||||||||||| ||  |||||||| ||||||||  || || |||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  20009497 tcaagcttgtggatttaatggttactagtaatcgaactgaagagggtgacttcaaggttgatgatcaaggtgtgttgaggttcagaggaagaatttgtat 20009596  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    || ||| ||  ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||| |||||||| || |||||    
T  20009597 tcttgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatccaggagctacaaatatgta 20009683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 31570469 - 31570653
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| |||||||| ||  | || |||||||  || ||  | || |||||||| ||||    
T  31570469 ttcaaggttgatgatcagggtgtgttgagattcagaggtagaatttgtattcctgataatgaagaaatgaaaaagttaatcctagaggaaagtcataaga 31570568  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||| || || ||||||||||||||||||||||| || || |||||||||||||||||||||  ||| |||||||| |||||    
T  31570569 gtagcttaagcattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgt 31570653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 22372140 - 22371946
Alignment:
Q  5 gtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcct 104  Q
    |||||||||||||||| ||| |||||||||||| |||   || ||||||||||||||||| |   ||||||||||||||||||| ||||| | |||||||    
T  22372140 gtttgtggatttaatggttgctagtaatcaaaccgaaaagggtgatttcaaggttgatgatctgtgtgtgttgaggttcagaggaagaatattcattcct 22372041  T
Q  105 gacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaa 199  Q
    || |   ||||| ||||||  |||||| | |||||||||||||  |||||||| ||||| || | ||||||||| |||||||| || ||||||||    
T  22372040 gatagtgatgagttgaaaaagttgattatagaagaaagtcacagaagtagcttaagtattcacctgggagctacaaagatgtatcatgacttgaa 22371946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 803297 - 803475
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  803297 gatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattctagaggagagtcaca 803396  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaa 226  Q
    ||||||| |||||||| || || || ||||| ||||||||||| || ||||| || ||||||||||||  |||||||||    
T  803397 agagtaggttgagtattcacccaggggctacaaagatgtaccatgatttgaagaaactgttttggtggtctggtttgaa 803475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 22247996 - 22248228
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  |||||| ||||||||| ||||||| | | ||||| ||  | ||||| || || |||||||| |||  |||||||||||| ||||    
T  22247996 aagtttgtggacttgttgattgctagtaatcagactgaagatagtgattttaaaatcgatgatcagggagtgttgagattccaaggcagaatttgtattc 22248095  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    ||||||   | |||||||| | | ||||| | ||||| ||||| |  ||||||||| |||| |||||||||||||||| |||||| || || ||||| ||    
T  22248096 ctgacattgacgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgtgtattcatccgggagctacgaggatgtatcatgatttgaagaa 22248195  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
    | |||||||||||  ||| ||||| ||||||||    
T  22248196 gttgttttggtggtctgggttgaaacgtgatgt 22248228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 16270848 - 16271015
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||  ||||||||||||| ||| | || |||||||||||  ||||  |||| |  |||||| | || || |||||||    
T  16270848 gattttaaggttgatgatcagggtgtactgaggttcagaggaagagtatgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcaca 16270947  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||| || ||||| |||||||||||||||    
T  16270948 agagtaggttgagtattcacccgggggctacaaagatgtaccatgatttgaagaagctgttttggtgg 16271015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 23950052 - 23949909
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||| | ||| ||||||||| ||| |||||||||||  |||||||||| ||||  |||| | ||||| |||||||  |||||||||||||| ||||||    
T  23950052 gtgttgcgattccgaggcagaaattgtattcctgacaatgatgagatgaagaagac-gattcttgaagagagtcacataagtagcttgagtattcatccg 23949954  T
Q  171 ggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||||||| || || ||||| ||| |||||||||||    
T  23949953 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 23949909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 12305915 - 12305748
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || ||||| |||||||||||| | ||| | ||||||||||||||  ||||| |||| |  || ||| | ||||| ||||| |    
T  12305915 gattttaaggttgatgatcagggtgttttgaggttcagatgaagagtatgcattcctgacaatgatgagttgaagaagttaattcttgaagagagtcata 12305816  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||    
T  12305815 agagtaggttgagtattcacccgggggctactaaaatgtaccatgatttgaagaaactgttttggtgg 12305748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 22988398 - 22988168
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  |||||  ||||||||| ||||||| | | ||||| ||  | ||||| || || |||||||| ||| ||||||||||||  ||||    
T  22988398 aagtttgtggaattgttgatttctagtaatcagactgaagatagtgattttaaaatcgatgatcaaggcgtgttgagattccgaggcagaatttctattc 22988299  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    || || |  |||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||||||||||||| ||||| || ||  |||| ||    
T  22988298 cttacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaaaatgtatcatgatctgaagaa 22988199  T
Q  203 gctgttttggtgggttggtttgaagcgtgat 233  Q
    | |||||||||||  ||| ||||| ||||||    
T  22988198 gttgttttggtggtctgggttgaaacgtgat 22988168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 27355698 - 27355538
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||  |||| |||||||| ||| |||| |||||||||| | ||||| ||||  | |||||| | ||||| |||||||||||||    
T  27355698 aaggttgatgatcagggtgtactgagattcagagggagagtttgtattcctgacagcgatgagttgaaggg-ttgattcttgaagatagtcacaagagta 27355600  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | |||||||| || ||||| ||||| |||||||| || || ||||| || ||||||||||||    
T  27355599 gattgagtatacacccgggggctacaaagatgtatcatgatttgaagaaactgttttggtgg 27355538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 20395793 - 20395943
Alignment:
Q  85 gaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaaga 183  Q
    ||||||||||||  ||||| |||||  ||||||| || ||||| |||| | |||||||||||||  |||||||||||||| |||||||||||||| ||||    
T  20395793 gaggcagaatttatattcccgacaatgatgagataaagaagat-gattcttgaagaaagtcacagaagtagcttgagtattcatccgggagctacaaaga 20395891  T
Q  184 tgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| || || ||||| ||  |||||||||||  ||| ||||| ||||||||    
T  20395892 tgtatcatgatttgaagaaattgttttggtggtctgggttgaaacgtgatgt 20395943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 215
Target Start/End: Original strand, 22377102 - 22377245
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgg 171  Q
    |||||||| ||| ||||||||||||| |||||| || |  |||||||||| | | ||||| | ||||| ||||| |  | |||||||||||| |||||||    
T  22377102 gtgttgagattctgaggcagaatttgtattcctaacgatgatgagatgaagaaaatgattcttgaagagagtcatagaaatagcttgagtattcatccgg 22377201  T
Q  172 gagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || ||||| ||| |||||||||||    
T  22377202 gagctacaaagatgtatcatgatttgaagaagttgttttggtgg 22377245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 215
Target Start/End: Original strand, 22383277 - 22383420
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgg 171  Q
    |||||||| ||| ||||||||||||| |||||| || |  |||||||||| | | ||||| | ||||| ||||| |  | |||||||||||| |||||||    
T  22383277 gtgttgagattctgaggcagaatttgtattcctaacgatgatgagatgaagaaaatgattcttgaagagagtcatagaaatagcttgagtattcatccgg 22383376  T
Q  172 gagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || ||||| ||| |||||||||||    
T  22383377 gagctacaaagatgtatcatgatttgaagaagttgttttggtgg 22383420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 19979171 - 19978985
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| |||||||||  |||||| ||| || || ||||| ||||| || ||||| ||||| ||| ||||  ||||||| ||    
T  19979171 tcaagtttgtagacttgttggttgctagtaatcaggctgaagatggtgactttaaggtcgatgaccatggtgtattgagattccgaggtcgaatttgtat 19979072  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    || ||||||  | |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  19979071 tcttgacaatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgta 19978985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 29303056 - 29303217
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||| ||||||||||| | ||| |||| |||||||||||  ||||  |||| | ||||||| | | ||| |||||||||||||    
T  29303056 aaggttgatgatcagggtgtgctgaggttcagatgaagagtttgtattcctgacaatgatgatttgaagaaattgattcttgtagagagtcacaagagta 29303155  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | ||||| || || ||||| ||||| |||||||| || || |||||  | ||||||||||||    
T  29303156 ggttgagcattcacccgggggctacaaagatgtatcatgatttgaaggaactgttttggtgg 29303217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 30312721 - 30312946
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| |||||  |  ||| ||||||||| |||||||  || || || || || || || |||||||||||||| ||| ||||  | ||||||||    
T  30312721 tcaagtttgtagatttgttagttgctagtaatcagactgaagacggtgactttaaagtcgacgatcacggtgtgttgagattccgaggtcggatttgcat 30312820  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||||||| |    |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||||||||||||||||||| ||||| || ||     
T  30312821 tcctgacgatgcagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgtatcacgatttaaag 30312920  T
Q  201 aagctgttttggtgggttggtttgaa 226  Q
    ||| | || ||||||  |||||||||    
T  30312921 aagattttctggtggtctggtttgaa 30312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 21921447 - 21921547
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatg 234  Q
    ||||| ||||| | ||||| ||||||||| |||||||||||||||||||||||||||||  | || ||| |||||||||||  ||| ||||| |||||||    
T  21921447 gaagagagtcataggagtaacttgagtattcatccgggagctacgaagatgtaccacgatctaaagaagttgttttggtggtctggattgaaacgtgatg 21921546  T
Q  235 t 235  Q
    |    
T  21921547 t 21921547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 6604815 - 6604648
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||||||||||| || |||||| |||||||||| || ||| | || |||||||||||  ||||  |||| |  |||||| | || || |||||||    
T  6604815 gatttcaaggttgatgatcagggtgtgctgaggttcaggggtagagtctgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcaca 6604716  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || |||| |||||| || ||||| || || ||||| ||  |||||||||||    
T  6604715 agagtaggttgagtattcacccggaagctacaaaaatgtatcatgatttgaagaaattgttttggtgg 6604648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 6680268 - 6680101
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||||||||||| || |||||| |||||||||| || ||| | || |||||||||||  ||||  |||| |  |||||| | || || |||||||    
T  6680268 gatttcaaggttgatgatcagggtgtgctgaggttcaggggtagagtctgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcaca 6680169  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || |||| |||||| || ||||| || || ||||| ||  |||||||||||    
T  6680168 agagtaggttgagtattcacccggaagctacaaaaatgtatcatgatttgaagaaattgttttggtgg 6680101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 16407622 - 16407808
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || || || ||||| || ||||||||||| ||| ||||  | ||||||||    
T  16407622 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagtcgatgaccatggtgtgttgagattccgaggtcggatttgcat 16407721  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||| |  | |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || || |||||||||||||||||    
T  16407722 tcctgacgatgaagagatgaataaaatgattcttgaagagagtcatagaagtagcttgagtattcacccaggagctacgaagatgta 16407808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 21166115 - 21166301
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||    
T  21166115 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggagactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtat 21166214  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||  || |  | |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || ||||||||||||||||||||    
T  21166215 tcccaacgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaagatgta 21166301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 32601348 - 32601156
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||| ||| |||||  || ||| ||||||||| |||||||  || || || || || ||||| |||||||||||||| ||| ||||  | ||||| ||    
T  32601348 tcaagtatgtagatttgttggttgctagtaatcagactgaagacggtgactttaaagtcgatgatcacggtgtgttgagattccgaggtcggatttgtat 32601249  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacga 193  Q
    ||| ||| |    ||||||||   | ||||| | ||||| ||||| |  |||||||||||||||||||||||||||||||||||||| |||||    
T  32601248 tcccgacgatgcagagatgaaggaaatgattcttgaagagagtcatagaagtagcttgagtatccatccgggagctacgaagatgtatcacga 32601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 14566299 - 14566132
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| || |||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  14566299 gattttaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 14566200  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | ||||| |||||||| || || || ||||| || ||||| || || ||||| || ||||||||||||    
T  14566199 aaagtaggttgagtattcacccaggggctacaaaaatgtatcatgatttgaagaaactgttttggtgg 14566132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 17673668 - 17673834
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  17673668 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 17673766  T
Q  168 ccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||||||||||||| || || || ||| | || ||||||  ||||||||| || |||||    
T  17673767 ccgggagctacgaagatgtaccatgattttaagaagattttctggtggtctggtttgaaacgagatgt 17673834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 19483643 - 19483875
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || ||| |||  |||| |||||||   | ||||| ||| | ||||| || ||||||||||| ||| |||| || ||||| ||||    
T  19483643 aagtttgtggatttgttggttgctagagatcagactgaagacagtgattttaagatcgatgatcaaggtgtgttgagattccgaggaaggatttgtattc 19483742  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    | |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||||||||||||||||||| || || ||||| |    
T  19483743 cagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaagatgtatcatgatttgaaga 19483841  T
Q  202 agctgttttggtgggttggtttgaagcgtgatgt 235  Q
    || | || ||||||  ||||||||| || |||||    
T  19483842 agattttctggtggtctggtttgaaacgagatgt 19483875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 22132767 - 22132852
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| || || ||| | || ||||||  ||||||||| || |||||    
T  22132767 agtagcttgagtattcatccgggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatgt 22132852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 23651096 - 23651011
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||||||| |||| |||||||||||||||||| || ||  |||||||| |||||||||||  ||| ||||| ||||||||    
T  23651096 agtatcttgagtattcatctgggagctacgaagatgtatcatgatctgaaaaagttgttttggtggtctggattgaaacgtgatgt 23651011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 18857722 - 18857595
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| || ||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  18857722 gatgatcaaggtgtgttgagattccgaggaaggatttgtattccagacaatgaagagattaagaagat-gattctagaagagagtcatagaagtagcttg 18857624  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  18857623 agtattcatccgggagctacgaagatgta 18857595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 15534438 - 15534395
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacga 193  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  15534438 agtagcttgagtattcatccgggagctacgaagatgtatcacga 15534395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 19113826 - 19113708
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  19113826 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 19113728  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  19113727 ccgggagctacgaagatgta 19113708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 25283207 - 25283120
Alignment:
Q  128 gattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||| |||||| |||||| || ||||| ||||  ||||| ||||||||||| || || ||||| ||| |||||||||||    
T  25283207 gattttggaagaaggtcacaggagtagtttaagtattcatctaggagcgacgaagatgtatcaggatttgaagaagttgttttggtgg 25283120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 22041004 - 22040829
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| |||||||||||||| ||| ||||  | ||||||||||||||| |     | ||||| | | ||||| | ||||| ||||| |  ||||||||||    
T  22041004 gatgatcacggtgtgttgagattccgaggtcggatttgcattcctgacgatgcaaatatgaagaaaatgattcttgaagagagtcatagaagtagcttga 22040905  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||  ||||||||||||||||| ||||| || || ||| | || ||||||  ||| ||||| ||||||||    
T  22040904 gtattcatctaggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggattgaaacgtgatgt 22040829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 25283433 - 25283346
Alignment:
Q  128 gattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||| ||||||||||||| || ||||| ||||  ||||  ||||||||||| || || ||||| ||  |||||||||||    
T  25283433 gattttggaagaaggtcacaagagtagtttaagtattcatctaggagtgacgaagatgtatcaggatttgaagaaattgttttggtgg 25283346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 21043500 - 21043435
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||||||||| |||||| |||||||||||||||| || || || || ||| |||||||||||    
T  21043500 agtaacttgagtattcatccgagagctacgaagatgtatcatgatttaaagaagttgttttggtgg 21043435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 2517 - 2701
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| || ||||||||  ||| | ||||||  |||||||||||||||||||||||||    
T  2517 ttcaaggttgatgatcagggtgtgttgaggttcagaggcagaatttgtatccctgacaatgatgggttgaaaaagttgattttggaagaaagtcacaaga 2616  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||| ||||||||||||||||||||||| || || |||||||||||||||| ||||   |||||||||||||||||    
T  2617 gtagcttgagtattcatccgggagctacgaagatgtatcatgatttgaaaaagctgttttcgtggtccggtttgaagcgtgatgt 2701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 1038 - 804
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| ||||||| ||||||||| ||| ||||||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  1038 tcaagtttgttgatttaatggttgctagtaatgaaactgaagatggtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtat 939  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||| ||||  ||||||  |||||||||| |||||| ||||  |||||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  938 tcctgataacaatgatttgaaaaagttgattttggtagaaagccacagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 839  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  ||||||||||| |||| ||||| ||||||||    
T  838 aaattgttttggtggtttgggttgaaacgtgatgt 804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27693 - 27479
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||  ||  || ||||| |||||||| || |||||||||||||||||||| |||||||||||    
T  27693 tcaagtttgtggatttaatggttgctagtaatcaaactgaaaatgatgacttcaatgttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 27594  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||| ||||||  ||||||||||||||||||||||  |||||||| ||||| |||||||||||||| |||||||| || ||||||||     
T  27593 tcctgataatgatgagttgaaaaagttgattttggaagaaagtcacagaagtagcttaagtattcatccgggagctacaaagatgtatcatgacttgaag 27494  T
Q  201 aagctgttttggtgg 215  Q
    ||  |||||||||||    
T  27493 aaattgttttggtgg 27479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 105; Significance: 1e-52; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 13088 - 13272
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||| ||||| |||||||| ||||||||||||||||||||  ||||| ||||||  |||||||| ||||||||||||||||    
T  13088 ttcaaggttgatgatcagggtgtattgagattcagaggaagaatttgcattcctgacaatgatgagttgaaaaagttgattttagaagaaagtcacaaga 13187  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||| |||||||||||||| ||||||||||| || ||||| || ||||||||||||   |||||||||||||||||    
T  13188 gtagcttgagtattcatccgggagctacaaagatgtaccatgatttgaagaaactgttttggtggtccggtttgaagcgtgatgt 13272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 236
Target Start/End: Complemental strand, 68537 - 68304
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||||||||||||| ||  |||||||||| |||| | | | |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||    
T  68537 aagtttgtggatttaatggttactagtaatcaagctgaggatagagatttcaaggttgatgaacaaggtgtgttgagatttagaggcagaatttgtattc 68438  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  | ||  |||| |  |||||||| ||||||||||| ||||||| ||||||||| |||||||||||||| || ||||| || || ||||| ||    
T  68437 ctgacaatgaagaattgaagaagttgattttagaagaaagtcataagagtaacttgagtattcatccgggagctacaaaaatgtatcatgatttgaagaa 68338  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    | |||||| ||||  |||||||||| | ||||||    
T  68337 gttgtttttgtggtctggtttgaagagggatgtc 68304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 4143 - 4321
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||| ||||| || |||||||||||||||||||| |||||||| |||||||| ||  ||||  | ||||| || ||||| || ||||||||||||||||    
T  4143 aaggtggatgatcagggtgtgttgaggttcagaggaagaatttgtattcctgataatgatgatttcaaaaggttaattttagaggaaagtcacaagagta 4242  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||| ||||| ||| |||||||||| |||||||| || || || || |||||||||||||||   ||||||||||||||    
T  4243 gcttaagtattcattcgggagctacaaagatgtatcatgatttaaagaagctgttttggtggtccggtttgaagcgtga 4321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 48171 - 48385
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| | | ||||||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  48171 tcaagtttgttgatttaatggttgctagtaatcaaactgaagatagtgatttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtat 48270  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||| ||||||  ||||||||||||||||| || | ||||||||| ||||| ||||  |||||||| |||||||| || ||||||||     
T  48271 tcctgataatgatgagttgaaaaagttgattttggaagaaagccataggagtagcttaagtattcatctaggagctacaaagatgtatcatgacttgaag 48370  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  48371 aagttgttttggtgg 48385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 57034 - 57219
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || || || ||||||||||| || |||||||||||||||||  |  |     ||||||  || ||||| || |||||||||||||    
T  57034 ttcaaggttgatgatcagggagtattgaggttcaggggaagaatttgcattcctgatgatgacagtttgaaaaagttaattttagaggaaagtcacaaga 57133  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    ||||||||||||| |||||||||||||||||||||||||| || || |||||| |||||||||||   ||||||||||||||||||    
T  57134 gtagcttgagtattcatccgggagctacgaagatgtaccatgatttaaaaaagttgttttggtggtccggtttgaagcgtgatgtc 57219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 1648416 - 1648646
Alignment:
Q  6 tttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctg 105  Q
    ||||| ||||||||||||| | ||||| |||||||   ||| |||||||||||||||||||| ||||||||||| |||||| |||||||||| |||||||    
T  1648416 tttgttgatttaatgattgctggtaatgaaactgagaatggtgatttcaaggttgatgaacaaggtgtgttgagattcagaagcagaatttgtattcctg 1648515  T
Q  106 acaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagct 205  Q
    | ||  ||||| ||||||| || ||| | || |||||||||||||||||||| ||||| |||||||||||||| ||||||||||| || ||||| ||| |    
T  1648516 ataatgatgagttgaaaaggttaattctagaggaaagtcacaagagtagcttaagtattcatccgggagctacaaagatgtaccatgatttgaagaagtt 1648615  T
Q  206 gttttggtgggttggtttgaagcgtgatgtc 236  Q
    ||||||||||  |||||||||| | ||||||    
T  1648616 gttttggtggtctggtttgaagagggatgtc 1648646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 15002498 - 15002732
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||||||| ||| ||||||| ||||||||| |   || |||||||||||||| || |||||||||||||||||||| |||||||| ||    
T  15002498 tcaagtttgtggatttaatggttgctagtaatgaaactgaagataatgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgtat 15002597  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  |||||| ||||||| | |||||||||||||| |||||||| ||||| |||||||||||||| || ||||| || || |||||     
T  15002598 tcctgataatgatgatttgaaaaaattgattctagaagaaagtcacaaaagtagcttaagtattcatccgggagctacaaaaatgtatcatgatttgaag 15002697  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||  ||| ||||| ||||||||    
T  15002698 aaattgttttggtggtctgggttgaaacgtgatgt 15002732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 236
Target Start/End: Complemental strand, 27901522 - 27901289
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||||||||||||| ||  |||||||||| |||| | | | |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||    
T  27901522 aagtttgtggatttaatggttactagtaatcaagctgaggatagagatttcaaggttgatgaacaaggtgtgttgagatttagaggcagaatttgtattc 27901423  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  | ||  |||| |  |||||||| ||||||||||| ||||||| ||||||||| ||||||| |||||| || ||||| || || ||||| ||    
T  27901422 ctgacaatgaagaattgaagaagttgattttagaagaaagtcataagagtaacttgagtattcatccggaagctacaaaaatgtatcatgatttgaagaa 27901323  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    | |||||||||||  |||||||||| | ||||||    
T  27901322 gttgttttggtggtctggtttgaagagggatgtc 27901289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 8707054 - 8706822
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||||||||||| ||| || |||||||||||||| || ||||||||||| ||| ||||||||||||| ||||    
T  8707054 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttcaaggttgatgatcaaggtgtgttgagattccgaggcagaatttgtattc 8706955  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||| ||||||  |||||||| |||||||||||||| |||| ||| ||||| |||||| ||||||| |||||||| || ||||| || ||    
T  8706954 ctgataatgatgagttgaaaaagttgattttagaagaaagtcacaaaagtaacttaagtattcatccgagagctacaaagatgtatcatgacttaaagaa 8706855  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
      |||||||||||  ||| ||||| ||||||||    
T  8706854 attgttttggtggtctggattgaaacgtgatgt 8706822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 15078773 - 15078539
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||||||||||||||||||  || |||||||||||||||||  |  ||||||||||| ||||| || |||||||| ||||||||||| |||||||||||    
T  15078773 tcaagtttgtggatttaatggatgctagtaatcaaactgaagaggaagatttcaaggtcgatgagcagggtgtgttaaggttcagaggaagaatttgcat 15078674  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    || ||| |   ||||| ||||||  |||||| ||||||||||||| |  |||||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  15078673 tcttgatagtgatgagttgaaaaagttgattctggaagaaagtcatagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 15078574  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  | ||||||||| | || ||||| ||||||||    
T  15078573 aaattattttggtggttcggattgaaacgtgatgt 15078539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 15247062 - 15246848
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||||| | ||||||| | | || |||||||||||||| || ||||||||||||||||| || |||||||| ||    
T  15247062 tcaagtttgttgatttgatggttgctggtaatgacactgaagatagtgacttcaaggttgatgatcaaggtgtgttgaggttcaggggaagaatttgtat 15246963  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  | ||| ||||||  |||||| |||| |||||||||||||||||||| ||||| |||||||||||||| || ||||| || ||||||||     
T  15246962 tcctgataatgacgagttgaaaaagttgattctggaggaaagtcacaagagtagcttaagtattcatccgggagctacaaaaatgtatcatgacttgaag 15246863  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  15246862 aagttgttttggtgg 15246848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 235
Target Start/End: Original strand, 15358307 - 15358488
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||  ||||  ||||||  |||||||| ||  |||||||||||||||    
T  15358307 aaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgataatgatgatttgaaaaagttgattttagagtaaagtcacaagagta 15358406  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||| ||||||||||||||||| ||||| || || ||||| || || |||||||||  ||||||||| ||||||||    
T  15358407 gcttaagtattcatccgggagctacgaaaatgtatcatgatttgaagaaactattttggtggtctggtttgaaacgtgatgt 15358488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 15414162 - 15414374
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || |||||||||||||||||||||   | |||||||||||| |||| || ||||||||||| ||| |||| |||||||| ||||    
T  15414162 aagtttgtggatttgttggttgttagtaatcaaactgaagaaagtgatttcaaggttcatgatcagggtgtgttgagattctgaggaagaatttgtattc 15414261  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    || | ||  ||||| ||||||  ||||||||||||||||||||||  ||||| || ||||| ||||| |||||||| |||||||| || |||||||| ||    
T  15414262 ctcataatgatgagttgaaaaagttgattttggaagaaagtcacagaagtagtttaagtattcatccaggagctacaaagatgtatcatgacttgaagaa 15414361  T
Q  203 gctgttttggtgg 215  Q
      |||||||||||    
T  15414362 attgttttggtgg 15414374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 235
Target Start/End: Complemental strand, 15320261 - 15320054
Alignment:
Q  28 gtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagatt 127  Q
    ||||| ||||||||| ||| ||  ||||||||||||| || |||||||||||||||||||| ||||||| ||||||||| ||  ||||| ||||||  ||    
T  15320261 gtaattaaactgaagatggtgacctcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttacattcctgataatgatgagttgaaaaagtt 15320162  T
Q  128 gattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaag 227  Q
    ||||||  ||||||||||||  |||||||| ||||| ||||| ||| |||| |||||||| ||||||||||| ||  |||||||||||   ||||||||     
T  15320161 gattttaaaagaaagtcacagaagtagcttaagtattcatccaggacctacaaagatgtatcacgacttgaagaaattgttttggtggtccggtttgaaa 15320062  T
Q  228 cgtgatgt 235  Q
    ||||||||    
T  15320061 cgtgatgt 15320054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 16148790 - 16148618
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || |||||||||||||||| ||| |||||||| |||||||||||  | | | ||||||  |||| | |||| |||||||||||||| ||||| |    
T  16148790 gatgatcagggtgtgttgaggttcataggaagaatttgtattcctgacaatgaagggttgaaaaagttgactctggaggaaagtcacaagagcagcttaa 16148691  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||   || |||||||||||    
T  16148690 gtatccatccgggagctacgaaaatgtatcacgatttgaagaagttgttttggtggtccggcttgaagcgtga 16148618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 16152936 - 16152764
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || |||||||||||||||| ||| |||||||| |||||||||||  | | | ||||||  |||| | |||| |||||||||||||| ||||| |    
T  16152936 gatgatcagggtgtgttgaggttcataggaagaatttgtattcctgacaatgaagggttgaaaaagttgactctggaggaaagtcacaagagcagcttaa 16152837  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||   || |||||||||||    
T  16152836 gtatccatccgggagctacgaaaatgtatcacgatttgaagaagttgttttggtggtccggcttgaagcgtga 16152764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 33224011 - 33223847
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||  || |||||||||| |||||||| |||||||||||  ||||  |||| |  |||||| | ||||| ||||| ||||    
T  33224011 ttcaaggttgatgatcagggtgttctgtggttcagaggaagaatttgtattcctgacaatgatgatttgaagaagttgattctagaagagagtcataaga 33223912  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| |||||||| || ||||| ||||| ||||||||||| || ||||| || ||||||||||||    
T  33223911 gtaggttgagtattcacccgggggctacaaagatgtaccatgatttgaagaaactgttttggtgg 33223847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 3263975 - 3264142
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  3263975 gatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 3264074  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||    
T  3264075 agagtaggttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaactgttttggtgg 3264142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 14160552 - 14160374
Alignment:
Q  57 gttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagc 155  Q
    |||||||| || || |||||||| ||| | || |||||||| ||||| |||||  |||||||||| ||||| |||| | ||||| || ||   |||||||    
T  14160552 gttgatgaccaaggagtgttgagattccgcggtagaatttgtattccagacaatgatgagatgaagaagat-gattcttgaagagagccatcggagtagc 14160454  T
Q  156 ttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||||||||||||||||||| || || ||||| ||| |||||||||||  ||| ||||| ||||||||    
T  14160453 ttgagtatccatccgggagctacgaagatgtatcatgatttgaagaagttgttttggtggtctggattgaaacgtgatgt 14160374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 29452718 - 29452896
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | || || |||||||    
T  29452718 gatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcaca 29452817  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaa 226  Q
    ||||||| |||||||| || ||||| ||||| || ||||| || || ||||| || ||||||||||||  |||||||||    
T  29452818 agagtaggttgagtattcacccgggggctacaaaaatgtatcatgatttgaagaaactgttttggtggtctggtttgaa 29452896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 44661047 - 44661214
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||| ||  | ||| |||| |  |||||| | || || |||||||    
T  44661047 gattttaaggttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgataatgaagagttgaagaagttgattcttgaggagagtcaca 44661146  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||    
T  44661147 agagtaggttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaactgttttggtgg 44661214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 14695226 - 14695065
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||| ||||||||| | | ||||| ||  | ||||| || || |||||||| ||| ||||||||||||| ||||||||| |  |||||||||| | |    
T  14695226 tagtaattaaactgaagatagtgattttaaaatcgatgatcagggagtgttgagattccgaggcagaatttgtattcctgacgatgatgagatgaagaaa 14695127  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | ||||| ||||| |  |||||||||||||  |||||||||||||||||||||||    
T  14695126 atgattcttgaagagagtcatataagtagcttgagtactcatccgggagctacgaagatgta 14695065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 14850293 - 14850454
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||| ||||| || || |||||||| ||| ||||||||||||| ||||||||| |  |||||||||| | | ||||| | ||||| | ||| |  ||||    
T  14850293 aaggtcgatgatcaaggcgtgttgagattccgaggcagaatttgtattcctgacgatgatgagatgaagaaaatgattcttgaagagattcatagaagta 14850392  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||||| ||||||||||||| ||||||||| || || || || ||| |||||||||||    
T  14850393 gcttgagtattcatccgggagctatgaagatgtatcatgatttaaagaagttgttttggtgg 14850454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 11206412 - 11206579
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| ||  |||| |||||||||||  ||||  |||| |  |||||| | || || |||||||    
T  11206412 gattttaaggttgatgatcagggtgtgctgaggttcagaggaagggtttgtattcctgacaatgatgatttgaagaagttgattcttgaggagagtcaca 11206511  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | ||||| |||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||    
T  11206512 atagtaggttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaactgttttggtgg 11206579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 20892073 - 20891906
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || ||| |  ||||||||||||  ||| |||| ||| |||||||| ||||  |||| |  |||||| | ||||| |||||||    
T  20892073 gattttaaggttgatgatcagggtttcctgaggttcagagaaagagtttgtatttctgacaacgatgatttgaagaagttgattcttgaagagagtcaca 20891974  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||| ||  |||| || ||||||||||||    
T  20891973 agagtaggttgagtattcacccgggggctacaaagatgtaccatgatctgaagaaactgttttggtgg 20891906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 235
Target Start/End: Original strand, 1639360 - 1639533
Alignment:
Q  62 tgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaa-agattgattttggaagaaagtcacaagagtagcttgag 160  Q
    |||||| ||||||||||||||  |||| |||||||| ||| | |||||  | ||||| ||  |||| |||| | ||||| ||||| |  |||||||||||    
T  1639360 tgaacaaggtgtgttgaggtttcgaggtagaatttgtatttcagacaatgaagagattaaggagat-gattcttgaagagagtcatagaagtagcttgag 1639458  T
Q  161 tatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| || ||| |||||||||||||||| || || ||||||||| |||||||||||  ||| ||||| ||||||||    
T  1639459 tattcacccgagagctacgaagatgtatcatgatttgaaaaagttgttttggtggtctggattgaaacgtgatgt 1639533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 15146759 - 15146945
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||| || | | ||||||||| |||||||  || || || ||||| ||| |||| ||||||||||| ||| ||||  |||| || ||    
T  15146759 tcaagtttgtagacttattggtagctagtaatcagactgaagaaggtgaatttaaggtcgataaacatggtgtgttgagattccgaggtcgaatatgtat 15146858  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||  |  | |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  15146859 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgta 15146945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 12524680 - 12524580
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatg 234  Q
    ||||| |||||||  |||||||||||||||||||||| ||||||||||||||| ||||| || || ||| | || ||||||  ||||||||| || ||||    
T  12524680 gaagagagtcacagaagtagcttgagtatccatccggaagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatg 12524581  T
Q  235 t 235  Q
    |    
T  12524580 t 12524580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 14681646 - 14681519
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||  |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||| | ||||||||||    
T  14681646 gatgatcaaggtgtgttgagatttcgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagtcataggagtagcttg 14681548  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  14681547 agtattcatccgggagctacgaagatgta 14681519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 19777726 - 19777901
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  19777726 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 19777824  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| |||||||||||||||||||||||||| || || || ||| | || ||||||  ||||||||| || |||||    
T  19777825 agtattcatccgggagctacgaagatgtaccatgattttaagaagattttctggtggtctggtttgaaacgagatgt 19777901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18226320 - 18226506
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| |||||||  || || || || || || || |||||||||||||| ||| ||||  | ||||||||    
T  18226320 tcaagtttgtagacttgttggttgctagtaatcagactgaagacggtgactttaaagtcgacgagcacggtgtgttgagattccgaggtcggatttgcat 18226419  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||| |    || ||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  18226420 tcctgacgatgcagatatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgta 18226506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 14303001 - 14303086
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||||| ||| | || ||||||  ||||||||| || |||||    
T  14303001 agtagcttgagtattcatccgggagctacgaagatgtatcatgatttgaagaagattttctggtggtctggtttgaaacgagatgt 14303086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 23956736 - 23956651
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||| |||||||||||||||||||||||||| || || || ||| | || ||||||  ||||||||| || |||||    
T  23956736 agtagcttgagtattcatccgggagctacgaagatgtaccatgatttaaagaagattttctggtggtctggtttgaaacgagatgt 23956651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 8387491 - 8387364
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  8387491 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 8387393  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  8387392 agtattcatccgggagctacgaagatgta 8387364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 12477679 - 12477552
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  12477679 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 12477581  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  12477580 agtattcatccgggagctacgaagatgta 12477552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 29038337 - 29038464
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  29038337 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 29038435  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  29038436 agtattcatccgggagctacgaagatgta 29038464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 27712406 - 27712288
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  27712406 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcat 27712308  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  27712307 ccgggagctacgaagatgta 27712288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 8052646 - 8052683
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  8052646 agtagcttgagtattcatccgggagctacgaagatgta 8052683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 16354468 - 16354505
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  16354468 agtagcttgagtattcatccgggagctacgaagatgta 16354505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 18298194 - 18298109
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||| || ||||||||||| |||||||| ||||| || || ||| | || ||||||  ||||||||| || |||||    
T  18298194 agtagcttgagtattcacccgggagctacaaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatgt 18298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 187
Target Start/End: Complemental strand, 40474176 - 40473992
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||| |||||||   | ||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| || |    
T  40474176 aagtttgtggacttgttggttgctagtaatcagactgaagacagtgattttaaaatcgatgatcaaggtgtgttgagattccgaggaagaatttgtatcc 40474077  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    | |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||||||||| |||||||||    
T  40474076 cagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccgggagctatgaagatgta 40473992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 99; Significance: 6e-49; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 89582 - 89796
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| ||||||| ||||||||| | | || |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  89582 tcaagtttgttgatttgatggttgctagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 89681  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||  ||||  ||||||  |||||||| ||||||||||||||||||||||  ||||| |||||||||||||| || ||||| || || |||||     
T  89682 tcctgacaatgatgatttgaaaaagttgattttagaagaaagtcacaagagtagctaaagtattcatccgggagctacaaaaatgtatcatgatttgaag 89781  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  89782 aagttgttttggtgg 89796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 90260 - 90474
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| ||||||| ||||||||| | | || |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  90260 tcaagtttgttgatttgatggttgctagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 90359  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||  ||||  ||||||  |||||||| ||||||||||||||||||||||  ||||| |||||||||||||| || ||||| || || |||||     
T  90360 tcctgacaatgatgatttgaaaaagttgattttagaagaaagtcacaagagtagctaaagtattcatccgggagctacaaaaatgtatcatgatttgaag 90459  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  90460 aagttgttttggtgg 90474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 390489 - 390571
Alignment:
Q  153 agcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||| ||||||||||||||||||||||| || || ||||||||| | |||||||||  ||| ||||| ||||||||    
T  390489 agcttgagtattcatccgggagctacgaagatgtatcatgatttgaaaaagttattttggtggtctggattgaaacgtgatgt 390571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 48273 - 48096
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| ||| |||||||||||||||||  | |||||||||||||||||||| |||||||| ||    
T  48273 tcaagtttgttgatttaatggttgctagtaatcaaactgaagatggtgatttcaaggttgatgatgaaggtgtgttgaggttcagaggaagaatttgtat 48174  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctac 178  Q
    |||||| ||  ||||| ||||||  |||||| |||||||||||||||| |||||||| ||||| ||||||||||||||    
T  48173 tcctgataatgatgagttgaaaaagttgattctggaagaaagtcacaaaagtagcttaagtattcatccgggagctac 48096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 3960 - 3726
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||||| |||||||||   | || |||||||||||||  || |||||||||||||||||||| |||||||||||    
T  3960 tcaagtttgttgatttgatggttgctggtaatgaaactgaagagagtgacttcaaggttgatgttcagggtgtgttgaggttcagagggagaatttgcat 3861  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||| || ||  ||||| ||||||  || ||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| || ||||||||     
T  3860 tccagataatgatgagttgaaaaagtttattctggaagaaagtcacaagagtagcttaagtattcatccgggagctacaaagatgtatcatgacttgaag 3761  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| |||||||||||  ||| ||||| ||||||||    
T  3760 aagttgttttggtggtctgggttgaaacgtgatgt 3726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 5599 - 5365
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||| ||||||||||||| ||  ||||||| ||||||||| ||| || |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  5599 tcaagtgtgtggatttaatggttactagtaatgaaactgaagatggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 5500  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| |   ||||| ||||||  | ||||||||||||||  ||||  |||||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  5499 tcctgatagtgatgagttgaaaaagtcgattttggaagaaatacacagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 5400  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    || ||||||||||||  ||| ||||| ||||||||    
T  5399 aaactgttttggtggtctgggttgaaacgtgatgt 5365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 29226 - 28992
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||| ||||||||||||| ||  ||||||| ||||||||| ||| || |||||||||||||| || |||||||||||||||||||| ||||||| |||    
T  29226 tcaagtgtgtggatttaatggttactagtaatgaaactgaagatggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaattttcat 29127  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| |   ||||| ||||||  ||||||||||||||||| ||||  |||||||| ||||| ||||| |||||||| |||||||| || ||||||||     
T  29126 tcctgatagtgatgagttgaaaaagttgattttggaagaaagccacagaagtagcttaagtattcatccaggagctacaaagatgtatcatgacttgaag 29027  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||  ||| ||||| ||||||||    
T  29026 aaattgttttggtggtctgggttgaaacgtgatgt 28992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 30045 - 29922
Alignment:
Q  70 gtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 169  Q
    |||||||||||||  |||| || ||||| |||||  || |  |||||||||| | | ||||| | ||||| ||||| |  |||| ||||||||| |||||    
T  30045 gtgtgttgaggtttcgaggtaggatttgtattccaaacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttgagtattcatcc 29946  T
Q  170 gggagctacgaagatgtaccacga 193  Q
    ||||||||||||||||||||||||    
T  29945 gggagctacgaagatgtaccacga 29922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 3344 - 3111
Alignment:
Q  2 caagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcatt 101  Q
    ||||||||| ||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||   | |||||||||||||||||||| |||||||| |||    
T  3344 caagtttgttgatttaatggttgctagtaatcaaactgaagatggtgatttcaaggttgatggtgagggtgtgttgaggttcagaggaagaatttgtatt 3245  T
Q  102 cctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    ||||| ||  ||||| ||||||   ||||| |||||||| ||||||| |||||||| ||||| |||||||||||||| || ||||| || || ||||| |    
T  3244 cctgataatgatgagttgaaaaagatgattctggaagaatgtcacaaaagtagcttaagtattcatccgggagctacaaaaatgtatcatgatttgaaga 3145  T
Q  202 agctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |  |||||||||||  ||| ||||| ||||||||    
T  3144 aattgttttggtggtctgggttgaaacgtgatgt 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 94; Significance: 5e-46; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 11196 - 11429
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||| ||| ||| | ||||| ||||||||| | | || || ||||||||||| || ||||||||||| |||| ||| |||||||||||||    
T  11196 aagtttgttgatttgatggttgctggtaatgaaactgaagatagtgactttaaggttgatgatcaaggtgtgttgagattcaaaggaagaatttgcattc 11295  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||  ||||||  ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||| || || ||||| ||    
T  11296 ctgataatgatgatgtgaaaaagttgattttggaggaaagccacaagagtagcttaagtattcatccgggagctacgaaaatgtatcatgatttgaagaa 11395  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    |||||||||||||   ||||||||||||||||||    
T  11396 gctgttttggtggtccggtttgaagcgtgatgtc 11429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 14966 - 15199
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||| ||| ||| | ||||| ||||||||| | | || || ||||||||||| || ||||||||||| |||| ||| |||||||||||||    
T  14966 aagtttgttgatttgatggttgctggtaatgaaactgaagatagtgactttaaggttgatgatcaaggtgtgttgagattcaaaggaagaatttgcattc 15065  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||  ||||||  ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||| || || ||||| ||    
T  15066 ctgataatgatgatgtgaaaaagttgattttggaggaaagccacaagagtagcttaagtattcatccgggagctacgaaaatgtatcatgatttgaagaa 15165  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    |||||||||||||   ||||||||||||||||||    
T  15166 gctgttttggtggtccggtttgaagcgtgatgtc 15199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21152 - 20918
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||||| ||| ||||| | | || ||||||||| |||| || ||| | |||| ||||| ||| || ||||| ||    
T  21152 tcaagtttgttgatttgatggttgctggtaatgaaattgaagatagtgacttcaaggttaatgatcagggtatattgaagttcacaggaaggatttgtat 21053  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  ||||||  |||||||| || |||||||||||||||||||| ||||| ||||||||||||||||| ||||| || || |||||     
T  21052 tcctgataatgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatccgggagctacgaaaatgtatcatgatttgaag 20953  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| ||||||| |  ||| ||||| ||||||||    
T  20952 aagctattttggttgtctgggttgaaacgtgatgt 20918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 24211 - 24423
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||||||||||| ||| || |||||||||||||| || ||||||||||| ||| ||||||||||||| ||||    
T  24211 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttcaaggttgatgatcaaggtgtgttgagattccgaggcagaatttgtattc 24310  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||| ||||||  |||||||| |||||||||||||| |||||||| ||||| |||||||||||||| ||||||||  | |||||||| ||    
T  24311 ctgataatgatgagttgaaaaagttgattttagaagaaagtcacaaaagtagcttaagtattcatccgggagctacaaagatgtataatgacttgaagaa 24410  T
Q  203 gctgttttggtgg 215  Q
      |||||||||||    
T  24411 attgttttggtgg 24423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 6822 - 6974
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||| |||||||||||| | ||  ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  6822 tcaagcttgtggatttaagggttaatagtaatcaaactgaagatagtgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgtgt 6921  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    |||||||||  |||||||||||||  ||||||| |||||||||||||||||||    
T  6922 tcctgacaatgatgagatgaaaaggctgattttagaagaaagtcacaagagta 6974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 203 - 430
Alignment:
Q  5 gtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcct 104  Q
    |||||||||||||||| ||| |||||||||||||||||  || ||||||||||||||||| || |||||||||||||||||||| |||| |||||||| |    
T  203 gtttgtggatttaatggttgctagtaatcaaactgaagagggtgatttcaaggttgatgatcaaggtgtgttgaggttcagaggaagaacttgcattctt 302  T
Q  105 gacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagc 204  Q
    || |   ||||| ||||||  |||||||| ||||||||||| |  |||||||| ||||| |||||||||||||| |||||||| || |||||||| ||      
T  303 gatagtgatgagttgaaaaagttgattttagaagaaagtcatagaagtagcttaagtattcatccgggagctacaaagatgtatcatgacttgaagaaat 402  T
Q  205 tgttttggtgggttggtttgaagcgtga 232  Q
    | |||||||||   |||||||| |||||    
T  403 tattttggtggtccggtttgaaacgtga 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 32580 - 32345
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||||| ||||||||| | | || |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  32580 tcaagtttgttgatttgatggttgctggtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 32481  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  ||||||  |||||| |||| |||||||||||||||||||| ||||| |||||||||||||| || ||||| || ||||||||     
T  32480 tcctgataatgatgatttgaaaaagttgattctggaggaaagtcacaagagtagcttaagtattcatccgggagctacaaaaatgtatcatgacttgaag 32381  T
Q  201 aagctg-ttttggtgggttggtttgaagcgtgatgt 235  Q
    || ||| |||||||||  ||| ||||| ||||||||    
T  32380 aaactgtttttggtggtctgggttgaaacgtgatgt 32345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 1052 - 826
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||||||||| ||| ||  |||||||||| ||||   | | |||||||||||||||||||| ||||||||||| || |||||||||||||| ||    
T  1052 tcaagtttgtggattttatggttactagtaatcaagctgagaatagtgatttcaaggttgatgaacaaggtgtgttgagatttagaggcagaatttgtat 953  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||  | ||  |||| |  |||||||| ||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| || || |||||     
T  952 tcctgacaatgaagaattgaagaagttgattttagaagaaagtcataagagcaacttgagtattcatccgggagctacgaagatgtatcatgatttgaag 853  T
Q  201 aagctgttttggtgggttggtttgaag 227  Q
    ||| |||||||||||  ||||||||||    
T  852 aagttgttttggtggtctggtttgaag 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 1110 - 1343
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| |||||||  | |||||| | | ||||||||||||||||| || || ||||||||||||||||| |||||||||||    
T  1110 tcaagtttgttgatttaatggttgctagtaatgga-ctgaagatagtgatttcaaggttgatgatcaaggagtgttgaggttcagaggaagaatttgcat 1208  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||||||  ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| ||||  |||||||| |||||||| || ||||||||     
T  1209 tcctgacaatgatgagttgaaaatgttgattttagaagaaagtcacagaagtagcttaagtattcatctaggagctacaaagatgtatcatgacttgaag 1308  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||  ||| ||||| ||||||||    
T  1309 aaattgttttggtggtctgggttgaaacgtgatgt 1343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 11973 - 12158
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || || || ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  || ||||| || |||||||||||||    
T  11973 ttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttaattttagatgaaagtcacaaga 12072  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||||||  ||||||||    
T  12073 gtagcttgagtattcatccgggagctacgaagatgtaccatgatttgaaaaagctgttttggtggttcggtttgaattgtgatgtc 12158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 2494 - 2727
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||||||| ||||| ||||| |||| || | | | || |||||||| ||||| || |||||||| ||||||||||| || ||||| ||||    
T  2494 aagtttgttgatttaatggttgttggtaatgaaacagaggatagtgacttcaaggtcgatgatcagggtgtgttaaggttcagaggaaggatttgtattc 2593  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  | ||  ||||||  |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| || || ||||| ||    
T  2594 ctgacaatgaagaattgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccaggagctacgaaaatgtatcatgatttgaagaa 2693  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    | |||||||||||   ||||||||||||||||||    
T  2694 gttgttttggtggtccggtttgaagcgtgatgtc 2727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 8179 - 7998
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||||||||||| ||||| ||||||| |||||||||  |  |||   ||||||  || ||||| || || ||||||||||    
T  8179 ttcaaggttgatgatcagggtgtgttgaggtttagaggaagaattttcattcctgatgatgatggtttgaaaaagttaattttagaggagagtcacaaga 8080  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||| |||||||||||| ||||| || || ||||| ||| |||||||||||    |||||||||||||    
T  8079 gtagcttgagtattcatctgggagctacgaaaatgtatcatgatttgaataagttgttttggtggtccagtttgaagcgtga 7998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 235
Target Start/End: Complemental strand, 28341 - 28160
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| |||||||| ||  ||||| ||||||  |||||| |||| ||||||||||||||||    
T  28341 aaggttgatgatcagggtgtgttaaggttcagaggaagaatttgtattcctgataatgatgagttgaaaaagttgattctggaggaaagtcacaagagta 28242  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||||  ||| ||||| ||||||||    
T  28241 gcttaagtattcatccgggagctacaaaaatgtatcacgacttgaagaagctgttttggtggtctgggttgaaacgtgatgt 28160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 194843 - 195072
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||||||| ||||| |||||   ||||| | | | || |||||||||||||| || ||||||||||| |||||||| |||||||||||||    
T  194843 aagtttgttgatttaatggttgttggtaatggcactgaggatagtgacttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattc 194942  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    ||||  |  ||||  ||||||  || ||||| || |||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||| ||    
T  194943 ctgatgatgatgatttgaaaaagttaattttagaggaaagtcacaagagtagcttaagtattcatccgggagctacaaagatgtatcacgatttgaagaa 195042  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||   ||||||||||||||    
T  195043 gctgttttggtggtccggtttgaagcgtga 195072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 149739 - 149505
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    ||||||||||||| || ||| ||| | ||||| ||||||| |   | || || ||||||||||| || |||||||||||||||||||| | |||||||||    
T  149739 tcaagtttgtggacttgatggttgctggtaatgaaactgaggaaagtgactttaaggttgatgatcagggtgtgttgaggttcagaggaaaaatttgcat 149640  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  ||||||  |||||| |||| |||||||||||||||||||| ||||| |||||||||||||| |||||||| || || |||||     
T  149639 tcctgataatgatgatttgaaaaagttgattctggaggaaagtcacaagagtagcttaagtattcatccgggagctacaaagatgtatcatgatttgaag 149540  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||  ||| ||||| ||||||||    
T  149539 aagctgttttggtggtctgggttgaaacgtgatgt 149505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 25672 - 25884
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  |||||| ||||||||| ||||||| | ||||||| ||  | |||||  | || |||||| | ||  |||| |||||||| ||||    
T  25672 aagtttgtggacttgttgattgctagtaatcagactgaagatagcgattttaaaatcgatgattagggagtgttgcgttttcgagggagaatttgtattc 25771  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  |||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || |||||||||||||||||||| ||||| ||||| ||    
T  25772 ctgacaatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaagatgtatcacgatttgaagaa 25871  T
Q  203 gctgttttggtgg 215  Q
    | |||||||||||    
T  25872 gttgttttggtgg 25884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 24098859 - 24099043
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||||||||| || || ||||| |||||||||||||| |||||||| |||||||||||  ||| | ||||||  |||||||| ||||||||||||||||    
T  24098859 ttcaaggttgacgatcagggtgttttgaggttcagaggaagaatttgtattcctgacaatgatgggttgaaaaagttgattttagaagaaagtcacaaga 24098958  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||| || ||||||||||| ||||||||||| || ||||| || ||||||||||||   |||||||||| ||||||    
T  24098959 gtagcttgagtattcacccgggagctacaaagatgtaccatgatttgaagaaactgttttggtggtccggtttgaagcatgatgt 24099043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 236
Target Start/End: Original strand, 19662396 - 19662578
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || ||||| |||||||||||||| |||||||| |||||||| ||  | ||| ||||||  |||||||| || ||||||||||||||||    
T  19662396 aaggttgatgatcagggtgtattgaggttcagaggaagaatttgtattcctgataatgacgagttgaaaaagttgattttagaggaaagtcacaagagta 19662495  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    |||| ||||| | ||||| ||||||||| ||||| || || ||||| |||||||||||||||   ||||||||||||||||||    
T  19662496 gcttaagtattcgtccggaagctacgaaaatgtatcatgatttgaagaagctgttttggtggtccggtttgaagcgtgatgtc 19662578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 20939319 - 20939500
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||| | |||||||||||||||||  |  ||||  | ||||  || ||||| ||||||||||||||||    
T  20939319 ttcaaggttgatgatcaaggtgtgttgagattcagaagaagaatttgcattcctgatgatgatgatttaaaaaagttaattttagaagaaagtcacaaga 20939418  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| ||||||||||||||||| ||||| || || ||||| ||||| |||||||||   ||||||||||||||    
T  20939419 gtagcttgagtattcatccgggagctacgaaaatgtatcatgatttgaagaagctattttggtggtccggtttgaagcgtga 20939500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 20856013 - 20856180
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||||||||||| || ||||||||||| || |||||||||||||| |||||||||||  | ||  |||| |  |||||||| ||||||||||| |    
T  20856013 gatttcaaggttgatgagcaaggtgtgttgagattaagaggcagaatttgtattcctgacaatgaggaattgaagaagttgattttagaagaaagtcata 20856112  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| | ||||||||| |||||||||||||| || ||||| || |||||||| ||  |||||||||||    
T  20856113 agagcaacttgagtattcatccgggagctacaaaaatgtatcatgacttgaagaaattgttttggtgg 20856180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 50619509 - 50619684
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || ||||||||||||||  |||| |||||||| |||||  ||||  |||||||||| | | ||||| | ||||| ||||| || ||||||||||    
T  50619509 gatgatcaaggtgtgttgaggtttcgaggtagaatttgtattccatacaatgatgagatgaagaaaatgattcttgaagagagtcataaaagtagcttga 50619608  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||||||||||||||||||||| || || ||||||||| |||||||||||  ||| ||||| ||||||||    
T  50619609 gtattcatccgggagctacgaagatgtatcatgatttgaaaaagttgttttggtggtctggattgaaacgtgatgt 50619684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 19855405 - 19855244
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || ||||| |||||||||||||| || ||||| |||||||| ||  | ||| ||||||  |||||||| || ||||||||||||| ||    
T  19855405 aaggttgatgatcagggtgtattgaggttcagaggaaggatttgtattcctgataatgacgagttgaaaaagttgattttagaggaaagtcacaagaata 19855306  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||||| |||| |||||||||||| ||||| || || ||||| | |||||||||||||    
T  19855305 gcttaagtattcatctgggagctacgaaaatgtatcatgatttgaagacgctgttttggtgg 19855244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 20835231 - 20835328
Alignment:
Q  138 gaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||||||||||  ||| ||||| ||||||||    
T  20835231 gaaagtcacaagagtagcttgagtattcatccgggagctacgaaaatgtatcatgacttgaagaagctgttttggtggtctgggttgaaacgtgatgt 20835328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 22110150 - 22109961
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| | | ||||| ||| | ||||| || || |||||||| ||| ||||||||||||| ||||| ||| |  |||||||||| | |    
T  22110150 tagtaatcagactgaagatagtgattttaagatcgatgaccaaggagtgttgagattccgaggcagaatttgtattccagacgatgatgagatgaagaaa 22110051  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
     ||||| | ||||| ||||| |  |||| ||||||||| || |||||||||||||||||||||||||| || || ||| |||||||||||    
T  22110050 atgattcttgaagagagtcatagaagtaacttgagtattcacccgggagctacgaagatgtaccacgatttaaagaagttgttttggtgg 22109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 22113999 - 22113810
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| | | ||||| ||| | ||||| || || |||||||| ||| ||||||||||||| ||||| ||| |  |||||||||| | |    
T  22113999 tagtaatcagactgaagatagtgattttaagatcgatgaccaaggagtgttgagattccgaggcagaatttgtattccagacgatgatgagatgaagaaa 22113900  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
     ||||| | ||||| ||||| |  |||| ||||||||| || |||||||||||||||||||||||||| || || ||| |||||||||||    
T  22113899 atgattcttgaagagagtcatagaagtaacttgagtattcacccgggagctacgaagatgtaccacgatttaaagaagttgttttggtgg 22113810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 20295518 - 20295351
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | ||||| |||||||    
T  20295518 gattttaaggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtcaca 20295419  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || |||||||| ||  |||| || ||||||||||||    
T  20295418 agagtaggttgagtattcacccgggggctacaaaaatgtaccatgatctgaagaaactgttttggtgg 20295351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 19107462 - 19107287
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| || |||| ||||||||||    
T  19107462 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagccacaggagtagcttg 19107364  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| ||||||||||||||||||||||| || || || || ||| | || |||||| ||||||||||||| |||||    
T  19107363 agtattcatccgggagctacgaagatgtatcatgatttaaagaagattttctggtggtttggtttgaagcgagatgt 19107287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 16373680 - 16373451
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||| |||||||   | || || ||||| ||||| || ||||||||||| ||  |||| |||||||| ||||    
T  16373680 aagtttgtggacttgttggttgctagtaatcagactgaagacagtgactttaaggtcgatgatcaaggtgtgttgagatttcgaggtagaatttgtattc 16373581  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    | ||| |  |||||||||| ||||| |||| | ||||| ||||| |  |||||||||||||| |||||||||||| |||||||||| || || ||||| |    
T  16373580 cagacgatgatgagatgaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcatccgggagctgcgaagatgtatcatgatttgaaga 16373482  T
Q  202 agctgttttggtgggttggtttgaagcgtga 232  Q
    || |||||||||||  ||| ||||| |||||    
T  16373481 agttgttttggtggtctggattgaaacgtga 16373451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 235
Target Start/End: Original strand, 19760132 - 19760313
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatga-aaagattgattttggaagaaagtcacaagagt 152  Q
    ||||| ||||| || || |||||| | ||| |||| |||||||| ||||||||| || ||||||||| |||||| |||| | ||||| |||||||  |||    
T  19760132 aaggtcgatgatcagggagtgttgcgattccgaggtagaatttgtattcctgacgacgatgagatgagaaagat-gattcttgaagagagtcacataagt 19760230  T
Q  153 agcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||||||| |||||||  |||||||| || || || || ||| |||||||||||  ||| ||||| ||||||||    
T  19760231 agcttgagtatccatccaggagctataaagatgtatcatgatttaaagaagttgttttggtggtctgggttgaaacgtgatgt 19760313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 23197454 - 23197608
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||||||||| ||| ||| | ||| | ||||||||| | | || || || |||||||| || |||||||||||||||||||| |||||||| ||||    
T  23197454 aagtttgtggatttgatggttgctggtagtgaaactgaagatagtgactttaaagttgatgatcagggtgtgttgaggttcagaggaagaatttgtattc 23197553  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagctt 157  Q
    |||| ||  ||||  ||||||  |||||||| || |||||| |||||||||||||    
T  23197554 ctgataatgatgatttgaaaaagttgattttagaggaaagtgacaagagtagctt 23197608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 31539250 - 31539417
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||  ||||||| || |||||| ||||||||| ||| ||| |||| |||||||||||  | ||| |||| |  |||||| |||| || |||||||    
T  31539250 gatttcaaaattgatgatcagggtgtgctgaggttcacaggtagagtttgtattcctgacaatgaagagttgaagaagttgattctggaggagagtcaca 31539349  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || |||||||| ||||| || || ||||| || ||||||||||||    
T  31539350 agagtaggttgagtattcacccaggggctacgaaaatgtatcatgatttgaagaaactgttttggtgg 31539417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 20139834 - 20139749
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||| ||||||||||||||||||||||| || || ||||| ||| |||||||||||  ||| ||||| ||||||||    
T  20139834 agtagcttgagtattcatccgggagctacgaagatgtatcatgatttgaagaagttgttttggtggtctggattgaaacgtgatgt 20139749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 37678186 - 37678019
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||  ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  37678186 gatttcaaagttgatgatcagggtgtactgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 37678087  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || || || ||||| || ||||| || || ||||| || ||||||||||||    
T  37678086 agagtagtttgagtattcacccaggggctacaaaaatgtatcatgatttgaagaaactgttttggtgg 37678019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 20835108 - 20835208
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||||||| ||| | |||||   ||||| | | | ||||| ||||||||||| || |||||||||||||||||||| |||||||||||||    
T  20835108 aagtttgttgatttaatggttgctggtaatggcactgaggatagtgattttaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattc 20835207  T
Q  103 c 103  Q
    |    
T  20835208 c 20835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 33390303 - 33390469
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  33390303 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattctcgaagagagtcatagaagtagcttgagtattcat 33390401  T
Q  168 ccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||||||||||||| || || || ||| | || ||||||  ||||||||| || |||||    
T  33390402 ccgggagctacgaagatgtaccatgatttaaagaagattttctggtggtctggtttgaaacgagatgt 33390469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 41352870 - 41353102
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || ||| |||  |||| |||||||   | ||||| ||| | ||||| || ||||||||||| ||| |||| || ||||| ||||    
T  41352870 aagtttgtggatttgttggttgctagagatcagactgaagacagtgattttaagatcgatgatcaaggtgtgttgagattccgaggaaggatttgtattc 41352969  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    | |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||||||||||||||||||| || || ||||| |    
T  41352970 cagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaagatgtatcatgatttgaaga 41353068  T
Q  202 agctgttttggtgggttggtttgaagcgtgatgt 235  Q
    || | || ||||||  ||||||||| || |||||    
T  41353069 agattttctggtggtctggtttgaaacgagatgt 41353102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 16077862 - 16078054
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| |||||||  || || || || || ||||| |||||||||||||| |||  |||  | ||||||||    
T  16077862 tcaagtttgtagacttgttggttgctagtaatcagactgaagacggtgactttaaagtcgatgaccacggtgtgttgagattccaaggtcggatttgcat 16077961  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacga 193  Q
     |||||| |    |||||||| | | | ||| | ||||| ||||| |  |||||||||||||| ||||||||||||||||||||||| |||||    
T  16077962 ccctgacgatgcagagatgaagaaaataattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgtatcacga 16078054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 17044370 - 17044446
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaa 226  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| || || ||| | || ||||||  |||||||||    
T  17044370 agtagcttgagtatccacccgggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaa 17044446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 21749984 - 21749860
Alignment:
Q  111 tatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgtttt 210  Q
    ||||||||||| | | ||||| | ||||| ||||| |  |||| ||||||||| ||||||||||||||||||||||| || ||  | || ||| ||||||    
T  21749984 tatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttgagtattcatccgggagctacgaagatgtatcatgatctaaagaagatgtttt 21749885  T
Q  211 ggtgggttggtttgaagcgtgatgt 235  Q
    |||||  ||| ||||| ||||||||    
T  21749884 ggtggtctggattgaaacgtgatgt 21749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 51332758 - 51332933
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||    
T  51332758 gatgatcaaggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttg 51332856  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| || |||||||||||||||||||| ||||| || || ||| | || ||||||  ||||||||| || |||||    
T  51332857 agtattcacccgggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatgt 51332933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 21838035 - 21837917
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccat 167  Q
    ||||||||||| ||| |||| |||||||| || || |||||  | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| |||    
T  21838035 ggtgtgttgagattccgaggaagaatttgtatcccagacaatgaagagattaataagat-gattcttgaagagagtcatagaagtagcttgagtattcat 21837937  T
Q  168 ccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||    
T  21837936 ccgggagctacgaagatgta 21837917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 21025326 - 21025140
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || |||||  |||| || ||||||||||| ||| ||||| ||||||| ||    
T  21025326 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaggtcaatgaccatggtgtgttgagattccgaggccgaatttgtat 21025227  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||  |  | | || ||| | | ||||| | ||| | ||||| |  |||||||||||||| || ||||||||||||||||||||    
T  21025226 tcctgatgatgaagggaggaagaaaatgattcttgaaaagagtcatagaagtagcttgagtattcacccgggagctacgaagatgta 21025140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 16349954 - 16349991
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  16349954 agtagcttgagtattcatccgggagctacgaagatgta 16349991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 215
Target Start/End: Complemental strand, 20250895 - 20250740
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || ||| ||||||||||  |||| || ||||| ||||| ||| |  |||||||||| | | ||||| | ||||| ||||| |  |||| |||||    
T  20250895 gatgatcaaggtatgttgaggttttgaggtaggatttgtattccagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttga 20250796  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||| ||||||||||||||||||| || ||  | || ||| |||||||||||    
T  20250795 gtattcattcgggagctacgaagatgtatcatgatctaaagaagttgttttggtgg 20250740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 21952015 - 21951848
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||| ||||| || |||||  |||| |||||||| ||| |||| |||||| ||||  ||||  |||| |  |||||  | ||||| |||||||    
T  21952015 gattttaaggtggatgatcagggtgtactgagattcagaggaagagtttgtattcctaacaatgatgatttgaagaagttgatccttgaagagagtcaca 21951916  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || ||||  || || ||||| || ||||||||||||    
T  21951915 agagtaggttgagtattcacccgggggctacaaatatgtttcatgatttgaagaaactgttttggtgg 21951848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 2622 - 2836
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||||| ||||||||| | | || ||||||||||||||  | ||||||||||||||| |||  |||||||||||    
T  2622 tcaagtttgttgatttgatggttgctggtaatgaaactgaagatagtgacttcaaggttgatgatgagggtgtgttgaggttcggagaaagaatttgcat 2721  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||| ||||||  |||||||| || |||||||||||||||||||| ||||| |||||||||||||| || ||||| || ||||||||     
T  2722 tcctgataatgatgagttgaaaaatttgattttagaggaaagtcacaagagtagcttaagtattcatccgggagctacaaaaatgtatcatgacttgaag 2821  T
Q  201 aagctgttttggtgg 215  Q
    ||| |||||||||||    
T  2822 aagttgttttggtgg 2836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18518 - 18332
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| | | || |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  18518 tcaagtttgttgatttaatggttgctagtaatcaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 18419  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    || ||| |   ||||| ||||||  |||||| ||||||||||| |||| |||||||| ||||| |||||||||||||| || |||||    
T  18418 tcatgatagtgatgagttgaaaaagttgattctggaagaaagtaacaaaagtagcttaagtattcatccgggagctacaaaaatgta 18332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 323823 - 323642
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| |||||||| ||||||||||||| |||  |  ||||  ||||||  || |||||||| |||||||||||||    
T  323823 ttcaaggttgatgatcagggtgtgttgagattcagaggaagaatttgcattcttgatgatgatgatttgaaaaagttaattttggaggaaagtcacaaga 323724  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||||||   ||||||||||||||    
T  323723 gtagcttgagtattcatccgggagctacgaaaatgtatcatgatttgaagaagctgttttggtggtccggtttgaagcgtga 323642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 202634 - 202819
Alignment:
Q  30 aatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattga 129  Q
    ||||||||||||| ||| || |||||||||||||| || ||||||||||| ||| | || |||||||| |||||||| ||  ||||| | ||||  ||||    
T  202634 aatcaaactgaagatggtgacttcaaggttgatgatcaaggtgtgttgagattccgcggtagaatttgtattcctgataatgatgagttaaaaaagttga 202733  T
Q  130 ttttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| |||||||||||||  |||||||| ||||| |||| ||||||||| |||||||| || |||||||| ||  |||||||||||    
T  202734 ttttagaagaaagtcacagaagtagcttaagtattcatcagggagctacaaagatgtatcatgacttgaagaaattgttttggtgg 202819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2112 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold2112
Description:

Target: scaffold2112; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 147 - 1
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| |||||||||||||||||  || ||||||||||||||||| || || ||||||||||||||||| |||||||||||    
T  147 tcaagtttgttgatttaatggttgctagtaatcaaactgaagagggtgatttcaaggttgatgatcagggggtgttgaggttcagaggaagaatttgcat 48  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||| ||| ||||| ||||||  |||||||| |||||||||||||    
T  47 tcctgataacgatgagttgaaaaagttgattttagaagaaagtcaca 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 5919 - 5685
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| | ||||| ||| ||||| | | || |||||||||||||| || ||| |||||||||||||||| |||||||| ||    
T  5919 tcaagtttgttgatttgatggttgctggtaatgaaattgaagatagtgacttcaaggttgatgatcagggtatgttgaggttcagaggaagaatttgtat 5820  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| ||  ||||  ||||||  |||||| ||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| || || |||||     
T  5819 tcctgataatgatgatttgaaaaagttgattctggaagaaagtcacaagagtagcttaagtattcatccgggagctacaaaaatgtatcatgatttgaag 5720  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||  |||||||||||  ||| ||||| ||||||||    
T  5719 aaattgttttggtggtctgggttgaaacgtgatgt 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 48396 - 48574
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  |||||||| || |||||||| |||||||    
T  48396 aaggttgatgatcagggtgtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattttagaggaaagtcataagagta 48495  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||   |||||||| |||||    
T  48496 gcttgagtattcatccgggagctacaaaaatgtaccacgatttgaaaaagctgttttggtggtccggtttgaaacgtga 48574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 235
Target Start/End: Complemental strand, 2704 - 2523
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    |||||||||||  | |||||||| ||||||||||| ||||||||||||||||| ||  ||||  |||||| ||||||||| || ||||||||||||||||    
T  2704 aaggttgatgattagggtgtgttaaggttcagaggaagaatttgcattcctgataatgatgatttgaaaaaattgattttagaggaaagtcacaagagta 2605  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| | ||| ||||||||||||||||| ||||| || || ||||| |||||||||||||||  |||||||||  |||||||    
T  2604 gcttaattattcatccgggagctacgaaaatgtatcatgatttgaagaagctgttttggtggtctggtttgaaaagtgatgt 2523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 42036 - 41855
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||||| |||||| |||||||| |||||| | ||  | ||| ||||||  |||||||| || |||||||||||||    
T  42036 ttcaaggttgatgatcagggtgtgttgaggtccagaggaagaatttgtattcctaataatgacgagttgaaaaagttgattttagaggaaagtcacaaga 41937  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||| ||||| |||||||||||||| |||||||| || || ||||| |||||||||||||||   ||||||||||||||    
T  41936 gtagcttaagtattcatccgggagctacaaagatgtatcatgatttgaagaagctgttttggtggtccggtttgaagcgtga 41855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 82; Significance: 8e-39; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 51367 - 51548
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||||||||||||||||  |||||||| |||||||||||  | ||  ||||||  |||||||| ||||||||||||||||    
T  51367 ttcaaggttgatgatcagggtgtgttgaggttcagagatagaatttgtattcctgacaatgacgaattgaaaaagttgattttagaagaaagtcacaaga 51466  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||| |||||||||| ||||| || || || || |||||||||||||||  ||| ||||| |||||    
T  51467 gtagcttgagtattcatccgcgagctacgaaaatgtatcatgatttaaagaagctgttttggtggtctgggttgaaacgtga 51548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 60401 - 60582
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||||||||||||||||  |||||||| |||||||||||  | ||  ||||||  |||||||| ||||||||||||||||    
T  60401 ttcaaggttgatgatcagggtgtgttgaggttcagagatagaatttgtattcctgacaatgacgaattgaaaaagttgattttagaagaaagtcacaaga 60500  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||| |||||||||| ||||| || || || || |||||||||||||||  ||| ||||| |||||    
T  60501 gtagcttgagtattcatccgcgagctacgaaaatgtatcatgatttaaagaagctgttttggtggtctgggttgaaacgtga 60582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 66789 - 66970
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||||||||||||||||  |||||||| |||||||||||  | ||  ||||||  |||||||| ||||||||||||||||    
T  66789 ttcaaggttgatgatcagggtgtgttgaggttcagagatagaatttgtattcctgacaatgacgaattgaaaaagttgattttagaagaaagtcacaaga 66888  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||| |||||||||| ||||| || || || || |||||||||||||||  ||| ||||| |||||    
T  66889 gtagcttgagtattcatccgcgagctacgaaaatgtatcatgatttaaagaagctgttttggtggtctgggttgaaacgtga 66970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 26494 - 26392
Alignment:
Q  76 tgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagc 175  Q
    ||||||| ||||| |||||||| |||||||| ||| ||||  ||||||  |||||||| || |||||||||||||||||||| ||||| |||||||||||    
T  26494 tgaggtttagaggaagaatttgtattcctgataacgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatccgggagc 26395  T
Q  176 tac 178  Q
    |||    
T  26394 tac 26392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 235
Target Start/End: Complemental strand, 3867 - 3686
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||  ||||  ||||||  |||||||| || ||||||||||||||||    
T  3867 aaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgataatgatgatttgaaaaagttgattttagaggaaagtcacaagagta 3768  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||| ||||| ||||||||||| ||||| || || ||||| |||||||||| ||||  ||| ||||| ||||||||    
T  3767 gcttaagtattcatccaggagctacgaaaatgtatcatgatttgaagaagctgttttagtggtctgggttgaaacgtgatgt 3686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 10960 - 10748
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||||||| ||| ||| ||| ||||||||  ||| || |||||||||||||| || |||||||||||||||||||| || ||||||||||    
T  10960 aagtttgttgatttaatggttgctagcaatgaaactgaaaatggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaaggatttgcattc 10861  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
     ||| ||  ||||  ||||||  |||||| | |||||||||||||  |||||| | ||||| |||||||||||||| |||||||| || |||||||| ||    
T  10860 ttgataatgatgatttgaaaaagttgattctagaagaaagtcacagaagtagcctaagtattcatccgggagctacaaagatgtatcatgacttgaagaa 10761  T
Q  203 gctgttttggtgg 215  Q
     ||||||||||||    
T  10760 actgttttggtgg 10748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 14340 - 14568
Alignment:
Q  7 ttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctga 106  Q
    |||| ||||| ||| ||| ||||||| ||||||||| | | || |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||    
T  14340 ttgttgatttgatggttgctagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaaggatttgtattcctga 14439  T
Q  107 caactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctg 206  Q
     ||  ||||  ||||||  |||||||| || ||||||||||| | |||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||    
T  14440 taatgatgatttgaaaaagttgattttagaggaaagtcacaaaactagcttaagtattcatccgggagctacaaaaatgtatcatgatttgaagaagctg 14539  T
Q  207 ttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||  ||| ||||| ||||||||    
T  14540 ttttggtggtctgggttgaaacgtgatgt 14568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 22519 - 22747
Alignment:
Q  7 ttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctga 106  Q
    |||| ||||| ||| ||| ||||||| ||||||||| | | || |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||    
T  22519 ttgttgatttgatggttgctagtaatgaaactgaagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaaggatttgtattcctga 22618  T
Q  107 caactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctg 206  Q
     ||  ||||  ||||||  |||||||| || ||||||||||| | |||||| ||||| |||||||||||||| || ||||| || || ||||| ||||||    
T  22619 taatgatgatttgaaaaagttgattttagaggaaagtcacaaaactagcttaagtattcatccgggagctacaaaaatgtatcatgatttgaagaagctg 22718  T
Q  207 ttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||  ||| ||||| ||||||||    
T  22719 ttttggtggtctgggttgaaacgtgatgt 22747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 823 - 1057
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||| ||| || |||| |||| |||| |   || ||||| |||||||| || |||||||||||||||||||| |||||||||||    
T  823 tcaagtttgttgatttgatggttgctaataatgaaacggaagatattgacttcaaagttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 922  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||||| |   ||||| || |||  |||||| | |||||||||||||||||||||| |||||| || ||||||||||| || ||||| || ||||||||     
T  923 tcctgatagtgatgagttggaaaagttgattctagaagaaagtcacaagagtagctagagtattcacccgggagctacaaaaatgtatcatgacttgaag 1022  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| |||||||||||  ||| ||||| ||||||||    
T  1023 aagttgttttggtggtctgggttgaaacgtgatgt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 236
Target Start/End: Complemental strand, 6332 - 6147
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || || || ||||| |||||||  |||||||| |||||||||||  | ||  ||||||  || ||||| || |||||||||||||    
T  6332 ttcaaggttgatgatcagggagtattgagattcagagatagaatttgtattcctgacaatgaagaattgaaaaagttaattttagaggaaagtcacaaga 6233  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgtc 236  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||    |||||||||| ||||||    
T  6232 gtagcttgagtattcatccgggagctacgaagatgtaccatgatttgaaaaagctattttggtggtccagtttgaagcgagatgtc 6147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 227
Target Start/End: Original strand, 372 - 597
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||||||||||||| ||  |||||||||| | ||   | | |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||    
T  372 aagtttgtggatttaatggttactagtaatcaagcggagaatagtgatttcaaggttgatgaacaaggtgtgttgagatttagaggcagaatttgtattc 471  T
Q  103 ctgacaactatgagatgaaaagattga-ttttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    |||||||  | ||  |||| |  |||| |||| ||||||||||| ||||| | ||||||||| |||||||||||||| || ||||| || |||||||| |    
T  472 ctgacaatgaagaattgaagaagttgatttttagaagaaagtcataagagcaacttgagtattcatccgggagctacaaaaatgtatcatgacttgaaga 571  T
Q  202 agctgttttggtgggttggtttgaag 227  Q
    ||||||||| ||||  ||||||||||    
T  572 agctgttttagtggtctggtttgaag 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 4639 - 4820
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||||||||||||  | ||||| ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  |||||||| ||||||||||| ||||    
T  4639 ttcaaggttgatgattagggtgtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattttagaagaaagtcataaga 4738  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| ||||||| ||||||||| |||||||| || ||||| |||||||||||||||   |||||||| |||||    
T  4739 gtagcttgagtattcatccggaagctacgaaaatgtaccatgatttgaagaagctgttttggtggtccggtttgaaacgtga 4820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 20239 - 20058
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||| |||||||| || ||||| ||||| |||||||| |||||||| |||||||||||  ||||| ||||||  |||||||| ||||| ||||||||||    
T  20239 ttcaaagttgatgatcagggtgtattgagattcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaagagagtcacaaga 20140  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| ||||| |||||||| ||  |||| || || ||||| |||||||||||||||   ||||||||||||||    
T  20139 gtagcttgagtattcatcctggagctactaatttgtatcatgatttgaagaagctgttttggtggtccggtttgaagcgtga 20058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 46538 - 46767
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||| ||| ||| ||||||| || |||| | | | || || ||||||||||| || |||||||||||||||||||| ||||| || ||||    
T  46538 aagtttgttgatttgatggttgctagtaatgaagctgaggatagtgactttaaggttgatgatcagggtgtgttgaggttcagaggaagaatctgtattc 46637  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||  ||||||  || ||||| ||||||||||||||||||||||||||||| ||||| |||||||| || ||| | || || ||||| ||    
T  46638 ctgataatgatgatttgaaaaagttaattttagaagaaagtcacaagagtagcttgagtattcatccaggagctacaaaaatgaatcatgatttgaagaa 46737  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||   ||||||||||||||    
T  46738 gctgttttggtggtccggtttgaagcgtga 46767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 41517 - 41684
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    |||||||| |||||||| || |||||| ||||||||||||| ||| |||| |||||||||||  | ||| |||| |  |||||| | || || |||||||    
T  41517 gatttcaaagttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgacaatgaagagttgaagaagttgattcttgaggagagtcaca 41616  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||    
T  41617 agagtaggttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaactgttttggtgg 41684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 3058 - 2869
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| | | ||||| ||  | ||||| || || |||||||| ||| ||||||||||||| |||||| |  |  |||||||||| | |    
T  3058 tagtaatcagactgaagatagtgattttaaaatcgatgatcagggggtgttgagattctgaggcagaatttgtattcctaatgatgatgagatgaagaaa 2959  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
     ||||| | ||||| ||||| |  |||||||||||||| || ||||||||||| |||||||| || || ||||| ||| |||||||||||    
T  2958 atgattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacaaagatgtatcatgatttgaagaagttgttttggtgg 2869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 249732 - 249551
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||  ||||||||||||| |||||||| |||||||||||  ||||| ||||||  |||||||| ||| ||||||||||||    
T  249732 ttcaaggttgatgatcagggtgttctgaggttcagaggaagaatttgtattcctgacaatgatgagttgaaaaagttgattttagaaaaaagtcacaaga 249633  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||| |||||||| || ||||| ||||| || |||||||| || ||||| |||||||||||||||   |||||||| |||||    
T  249632 gtagtttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaagctgttttggtggtccggtttgaaacgtga 249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 261427 - 261246
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || || || ||||| |||||||| ||||||||  ||| ||||||  | ||  ||||||  || ||||| |||||| |||||||||    
T  261427 ttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtgttcttgacaatgaagaattgaaaaagttaattttagaagaaggtcacaaga 261328  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||   |||||||| |||||    
T  261327 gtagcttgagtattcatccgggagctacgaagatgtaccatgatttgaaaaagctgttttggtggtccggtttgaaacgtga 261246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 187
Target Start/End: Original strand, 277992 - 278153
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||| ||||||| ||||||||  |  | |||||||| | |    
T  277992 tagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggccgaatttgtattcctgatgatgaagagatgaagaaa 278091  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | ||||| ||||| |  ||||| |||||||| || ||||||||||||||||||||    
T  278092 atgattcttgaagagagtcatagaagtaggttgagtattcacccgggagctacgaagatgta 278153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 21019 - 20835
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||| ||||| |||||||| |||||||| |||||| ||||  | ||  ||||||  |||||||| ||||||||||||||||    
T  21019 ttcaaggttgatgatcagggtgtattgagattcagaggtagaatttgtattccttacaatgaagaattgaaaaagttgattttagaagaaagtcacaaga 20920  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| ||||||| ||||||||| |||| || ||||| || || |||||||||||||||||||||   |||||||| ||||||||    
T  20919 gtagcatgagtattcatccgggacctacaaaaatgtatcatgatttgaaaaagctgttttggtggtccggtttgaaacgtgatgt 20835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 45636 - 45472
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||| ||||| |||||| | |||||||| | || ||||||  | ||  ||||||  |||||||| ||||||||||||||||    
T  45636 ttcaaggttgatgatcagggtgtattgagattcagatgtagaatttgtaatcttgacaatgaagaattgaaaaagttgattttagaagaaagtcacaaga 45537  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||| |||||||||||||| || |||||||| || ||||| ||||||||| |||||    
T  45536 gtagcttgagtattcatccgggagctacaaaaatgtaccatgatttgaagaagctgtttcggtgg 45472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 19632 - 19692
Alignment:
Q  155 cttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||| ||||||||||||||||||||||| || ||  | || ||| |||||||||||    
T  19632 cttgagtattcatccgggagctacgaagatgtatcatgatctaaagaagttgttttggtgg 19692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4945 - 4731
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||||||| ||| |||||||||||| ||||  || || |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  4945 tcaagtttgttgatttaatggttgctagtaatcaaaccgaagagggtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcat 4846  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    |||| | ||  ||||  ||| ||  |||||||| |||||||| ||||  |||||||| ||||| |||||||||||||  ||||||   || ||||||||     
T  4845 tcctaataatgatgatttgataaagttgattttagaagaaagccacagaagtagcttaagtattcatccgggagctaaaaagatgattcatgacttgaag 4746  T
Q  201 aagctgttttggtgg 215  Q
    ||  |||||||||||    
T  4745 aaattgttttggtgg 4731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 6425 - 6606
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||||||||| || ||||| |||||||||||||||||  |  ||||  ||||||  || ||||| || |||||||||||||    
T  6425 ttcaaggttgatgatcagggtgtgttgagatttagaggaagaatttgcattcctgatgatgatgatttgaaaaagttaattttagaggaaagtcacaaga 6524  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    ||||||||||||| |||||||||||||||||  || | || || ||||| |||||||||||||||   ||||||||||||||    
T  6525 gtagcttgagtattcatccgggagctacgaaagtgcatcatgatttgaagaagctgttttggtggtccggtttgaagcgtga 6606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 235
Target Start/End: Original strand, 20631 - 20812
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || ||||||||||| |||||||| |||||||||||||||||  |  ||||  ||||||  |||||||| ||| |||||||||||||||    
T  20631 aaggttgatgatcatggtgtgttgagattcagaggaagaatttgcattcctgatgatgatgatttgaaaaagttgattttagaaaaaagtcacaagagta 20730  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||| |||||||||||||| ||||| || |  || ||||| ||||| |||||||||  ||| ||||||||||||||    
T  20731 gcttaagtattcatccgggagctacaaagatctatcttgatttgaagaagcttttttggtggtctgggttgaagcgtgatgt 20812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 443 - 279
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||| ||||| |||||||| |||||||  |||||||| ||  | ||  ||||||  |||||||| ||||||||||||||||    
T  443 ttcaaggttgatgaccagggtgtattgagattcagaggtagaatttatattcctgaaaatgaagaattgaaaaagttgattttagaagaaagtcacaaga 344  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||| |||||||||||||| || |||||||| || ||||| || ||||||||||||    
T  343 gtagcttgagtattcatccgggagctacaaaaatgtaccatgatttgaagaaactgttttggtgg 279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 100754 - 100923
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgag---tatcc 165  Q
    ||||||||||| |||||||| |||||||| |||||| ||||  ||||| ||||||  |||||||| ||||||||||||||||||||||| ||   ||| |    
T  100754 ggtgtgttgagattcagaggaagaatttgtattcctaacaatgatgagttgaaaaagttgattttagaagaaagtcacaagagtagcttaagtattattc 100853  T
Q  166 atccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| ||||||||| |||||||| || || ||||| |||||||||||||||  || |||||||||||||||    
T  100854 atctgggagctacaaagatgtatcatgatttgaagaagctgttttggtggtctgatttgaagcgtgatgt 100923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 181340 - 181182
Alignment:
Q  29 taatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattg 128  Q
    |||||| ||||||| ||| || || ||||| ||||| || ||||||||||  ||| ||||| ||||||| ||||||||| |  | |||||||| | | ||    
T  181340 taatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgaaattccgaggccgaatttgtattcctgacgatgaagagatgaagaaaatg 181241  T
Q  129 attttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||| | ||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  181240 attcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgta 181182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 5547 - 5686
Alignment:
Q  75 ttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggag 174  Q
    ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  5547 ttgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattttagaagaaagtcacaagagtagcttgagtattcatccgggag 5646  T
Q  175 ctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| || ||||||||||| ||| ||||||| |||||||||    
T  5647 ctacaaaaatgtaccacgatttg-aaaagctattttggtgg 5686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 9947 - 10179
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || ||| |||||||| |||| ||| | | || |||||||||||||| |  ||||||||||| ||| |||| |||||||| |||     
T  9947 aagtttgtggatttgttggttggtagtaatccaactaaagatagtgacttcaaggttgatgatctgggtgtgttgagattccgaggaagaatttgtattt 10046  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||| ||  ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| |||| ||||||||  |||||||| || |||||||| ||    
T  10047 ctgataatgatgagttgaaaaagttgattttagaagaaagtcacagaagtagcttaagtattcatcagggagctaaaaagatgtatcatgacttgaagaa 10146  T
Q  203 gctgttttggtgggttggtttgaagcgtgatgt 235  Q
      |||||||||||   |||||||| ||||||||    
T  10147 attgttttggtggtccggtttgaaacgtgatgt 10179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 236
Target Start/End: Complemental strand, 13316 - 13132
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||| ||||| || |||||||||||||||||||| |||||||| |||||||| ||  ||||  | ||||| || ||||| || ||||||||||||||||    
T  13316 aaggtggatgatcagggtgtgttgaggttcagaggaagaatttgtattcctgataatgatgatttcaaaaggttaattttagaggaaagtcacaagagta 13217  T
Q  154 gcttgagtatccatccggg-agctacgaagatgtaccacgacttgaaaaagctgttttggtgggt-tggtttgaagcgtgatgtc 236  Q
    |||| ||||| |||||||| ||||||||| ||||| || || || || ||||||||||||| |||  ||||||||||||||||||    
T  13216 gcttaagtattcatccgggaagctacgaaaatgtatcatgatttaaagaagctgttttggttggtccggtttgaagcgtgatgtc 13132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 116126 - 116276
Alignment:
Q  85 gaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaaga 183  Q
    ||||||||||||| |||||||||||  |||||||||| |||| ||||| | ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  116126 gaggcagaatttgtattcctgacaatgatgagatgaagaaga-tgattcttgaagagagtcacagaagtagcttgagtattcatccgggagctacgaaga 116224  T
Q  184 tgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| || || ||||||||| |||||||||||  ||| ||||| ||||||||    
T  116225 tgtatcatgatttgaaaaagttgttttggtggtctgggttgaaacgtgatgt 116276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 286 - 472
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||| ||||||||||||| ||  ||||||| ||||||||| | | || ||||||||||| ||  | |||||||||||||||||||| |||||||||||    
T  286 tcaagtgtgtggatttaatggttactagtaatgaaactgaagatcgtgacttcaaggttgacgattagggtgtgttgaggttcagaggaagaatttgcat 385  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||| |   ||||| ||||||  |||||||| |||||||||||||  |||||||| ||||| |||   |||||||| ||||||||    
T  386 tcctgatagtgatgagttgaaaaagttgattttcgaagaaagtcacagaagtagcttaagtattcatttaggagctacaaagatgta 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 28318 - 28173
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    ||||||||||||||| |||| |||||||| ||| || | ||  ||||  ||||||  |||||||| || |||||||||||||||||||| ||||| ||||    
T  28318 ggtgtgttgaggttcggaggaagaatttgtatttctaataatgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatc 28219  T
Q  169 cgggagctacgaagatgtaccacgacttgaaaaagctgttttggtg 214  Q
     |||| ||||||| ||||| || || || || ||||||||||||||    
T  28218 tgggatctacgaaaatgtatcatgatttcaagaagctgttttggtg 28173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 34571 - 34426
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    ||||||||||||||| |||| |||||||| ||| || | ||  ||||  ||||||  |||||||| || |||||||||||||||||||| ||||| ||||    
T  34571 ggtgtgttgaggttcggaggaagaatttgtatttctaataatgatgatttgaaaaagttgattttagaggaaagtcacaagagtagcttaagtattcatc 34472  T
Q  169 cgggagctacgaagatgtaccacgacttgaaaaagctgttttggtg 214  Q
     |||| ||||||| ||||| || || || || ||||||||||||||    
T  34471 tgggatctacgaaaatgtatcatgatttcaagaagctgttttggtg 34426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 230187 - 229978
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aag 124  Q
    ||||||||| ||||||| ||| ||||| ||| | ||||| || ||||||||||| ||| |||| |||||||  ||||| ||| |  |||||||||| |||    
T  230187 tagtaatcagactgaagatggtgattttaagatcgatgatcaaggtgtgttgagattccgaggtagaatttatattccagacgatgatgagatgaagaag 230088  T
Q  125 attgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttg 224  Q
    || |||| | ||||||||||| |  |||||||||||||| ||||||||||||||||||||||| || || ||||||||| || ||||||||  ||| |||    
T  230087 at-gattcttgaagaaagtcatagaagtagcttgagtattcatccgggagctacgaagatgtatcatgatttgaaaaagttggtttggtggtctggattg 229989  T
Q  225 aagcgtgatgt 235  Q
    || ||||||||    
T  229988 aaacgtgatgt 229978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 235
Target Start/End: Original strand, 218626 - 218788
Alignment:
Q  73 tgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccggg 172  Q
    ||||||| ||| ||||||||||||| |||||||| ||  |||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||||    
T  218626 tgttgagattccgaggcagaatttgtattcctgataatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccggg 218725  T
Q  173 agctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||||| || || ||||| ||| |||||||||||  ||| ||||| ||||||||    
T  218726 agctacgaagatgtatcatgatttgaagaagttgttttggtggtctgggttgaaacgtgatgt 218788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 13438 - 13667
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||||||| ||| |||||||   ||||| | | | || ||||||||||||||| | ||||||||||| |||||||| |||||||||||||    
T  13438 aagtttgttgatttaatggttgctagtaatggcactgaggatagtgacttcaaggttgatgaaaagggtgtgttgagattcagaggaagaatttgcattc 13537  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
     |||  |  ||||  ||||||  || ||| | || |||||||||||||||||||| ||||| ||||  |||||||| || ||||| || || ||||| ||    
T  13538 ttgatgatgatgatttgaaaaagttaattctagaggaaagtcacaagagtagcttaagtattcatctaggagctacaaaaatgtatcatgatttgaagaa 13637  T
Q  203 gctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||   ||||||||||||||    
T  13638 gctgttttggtggtccggtttgaagcgtga 13667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 1991 - 2159
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| ||||| ||||||| ||||||| ||||||||| | | || ||||||||| |||| || ||||||||||||||| |||| |||||||| ||    
T  1991 tcaagtttgttgatttgatgattgctagtaatgaaactgaagatagtgacttcaaggttaatgatcagggtgtgttgaggttccgaggaagaatttgtat 2090  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatcc 169  Q
    |||||| ||  ||||  ||||||  |||||||| ||  ||||||||||||||||||| ||||| |||||    
T  2091 tcctgataatgatgatttgaaaaagttgattttagagaaaagtcacaagagtagcttaagtattcatcc 2159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 10647 - 10825
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||| ||||||||||||| ||||||||||||||| |  |  |||   ||||||  || ||||| || ||||||||||||||||    
T  10647 aaggttgatgatcagggtgtgctgaggttcagagggagaatttgcattcctaatgatgatggtttgaaaaagttaattttagaggaaagtcacaagagta 10746  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||| ||||| ||||||||||||||||| ||||| || || ||||| ||| |||||||||||    |||||||||||||    
T  10747 gcttaagtattcatccgggagctacgaaaatgtatcatgatttgaagaagttgttttggtggtccagtttgaagcgtga 10825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 20861 - 21039
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||| ||||||||||||| ||||||||||||||| |  |  |||   ||||||  || ||||| || ||||||||||||||||    
T  20861 aaggttgatgatcagggtgtgctgaggttcagagggagaatttgcattcctaatgatgatggtttgaaaaagttaattttagaggaaagtcacaagagta 20960  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||| ||||| ||||||||||||||||| ||||| || || ||||| ||| |||||||||||    |||||||||||||    
T  20961 gcttaagtattcatccgggagctacgaaaatgtatcatgatttgaagaagttgttttggtggtccagtttgaagcgtga 21039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 31915 - 32124
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aag 124  Q
    ||||||||| ||||||| | | ||||| ||  | ||||| || ||||||||||| ||| |||| |||||||| ||||||||| |  |||||||||| |||    
T  31915 tagtaatcagactgaagatagtgattttaaaatcgatgatcaaggtgtgttgagattccgaggtagaatttgtattcctgacgatgatgagatgaagaag 32014  T
Q  125 attgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttg 224  Q
    || |||| | ||||| ||||| |  |||| ||||||||||||||||||||||||||||||||| || ||  |||||||| |||||||||||  ||| |||    
T  32015 at-gattcttgaagagagtcatagaagtaacttgagtatccatccgggagctacgaagatgtatcatgatgtgaaaaagttgttttggtggtctgggttg 32113  T
Q  225 aagcgtgatgt 235  Q
    || ||||||||    
T  32114 aaacgtgatgt 32124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 17116 - 17348
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||| ||||||| |   || |||||||||||||| || |  |||||| | ||| ||||||||||||| ||||    
T  17116 aagtttgtggacttgttggttgctagtaatcagactgaagataatgacttcaaggttgatgatcaggaggtgttgcgattctgaggcagaatttgtattc 17215  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
     |||  |  |||||||||| ||||| |||| | ||||| |||||||| |||| ||||||||| ||||||||||||||||||||||| || || ||||| |    
T  17216 ttgaagatgatgagatgaagaagat-gattcttgaagagagtcacaaaagtaacttgagtattcatccgggagctacgaagatgtatcatgatttgaaga 17314  T
Q  202 agctgttttggtgggttggtttgaagcgtgatgt 235  Q
    || |||||||||||  ||| ||||| ||||||||    
T  17315 agttgttttggtggtctgggttgaaacgtgatgt 17348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 78 - 235
Target Start/End: Original strand, 25079 - 25236
Alignment:
Q  78 aggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagcta 177  Q
    ||||||||||| |||||||| |||||||| ||  ||||  ||||||  || ||||| || |||||||||||||||||||| ||||| |||||||||||||    
T  25079 aggttcagaggaagaatttgtattcctgataatgatgatttgaaaaagttaattttagaggaaagtcacaagagtagcttaagtattcatccgggagcta 25178  T
Q  178 cgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||| |  || ||||| |||||||||||||||  ||| ||||| ||||||||    
T  25179 cgaaaatgtatcctgatttgaagaagctgttttggtggtctgggttgaaacgtgatgt 25236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 51025 - 51234
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||| |||||| || | | || |||||||||||||| || |||||||||||||||||||| ||||||||||||||||| |   ||||  ||||||      
T  51025 tagtaatgaaactggagatagtgacttcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgatagtgatgatttgaaaaag 51124  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttga 225  Q
    |||||||| |||||||||||||  |||| ||| ||||| ||||  |||||||| |||||||| || || ||||| |   |||||||||||  ||| ||||    
T  51125 ttgattttagaagaaagtcacagaagtaacttaagtattcatctaggagctacaaagatgtatcatgatttgaagagattgttttggtggtctgggttga 51224  T
Q  226 agcgtgatgt 235  Q
    | ||||||||    
T  51225 aacgtgatgt 51234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 117 - 1
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||  ||||  ||||||  |||||||| || ||||||||||||||||    
T  117 aaggttgatgatcagggtgtgttgaggttcagaggaagaatttgcattcctgataatgatgatttgaaaaagttgattttagaggaaagtcacaagagta 18  T
Q  154 gcttgagtatccatccg 170  Q
    |||| ||||| ||||||    
T  17 gcttaagtattcatccg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 43902 - 43738
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || ||||| |||||||||||||| |||||||| |||||||||||  ||||| |||| |  || ||| | ||||| ||||||||||    
T  43902 ttcaaggttgatgatcagggtgttttgaggttcagaggaagaatttgtattcctgacaatgatgagttgaagaagttaattctagaagagagtcacaaga 43803  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| |||||||| || ||||| ||||| || |||||| | || ||||| || ||||||||||||    
T  43802 gtagtttgagtattcacccgggggctacaaaaatgtacaatgatttgaagaaactgttttggtgg 43738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 1263 - 1438
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||||||| |  |||||||||| | | |||| || ||||| ||||| | |||||||||||    
T  1263 gatgatcaaggtgtgttgagattccgaggtagaatttgtattcctgacgatgatgagatgaagaaaatgatatttgaagagagtcataggagtagcttga 1362  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| |||||||||||||||||||| || || ||  |||||||| ||||||||||   ||| ||||| ||||||||    
T  1363 gtattcatccgggagctacgaagatatatcatgatctgaaaaagttgttttggtgatctgggttgaaacgtgatgt 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 213
Target Start/End: Complemental strand, 11900 - 11690
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| ||||||||| ||| | ||||| |||| || | | | || |||||||||||||| || ||||| ||||| |||| ||| |||||||| ||||    
T  11900 aagtttgttgatttaatggttgctggtaatgaaacagaggatagtgacttcaaggttgatgatcagggtgtattgagattcataggtagaatttgtattc 11801  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    |||||||  | ||  ||||||  ||||| || ||||||||||| ||||||||||| ||||| ||||| |||||||| || ||||| || || ||||| ||    
T  11800 ctgacaatgaagaattgaaaaagttgatcttagaagaaagtcataagagtagcttaagtattcatccaggagctacaaaaatgtatcatgatttgaagaa 11701  T
Q  203 gctgttttggt 213  Q
    | |||||||||    
T  11700 gttgttttggt 11690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 187
Target Start/End: Original strand, 742 - 874
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || ||||| |||||||||||||| |||||||| |||||||| ||  | ||| ||||||  |||||||| || ||||||||||| ||||    
T  742 aaggttgatgatcaaggtgtattgaggttcagaggaagaatttgtattcctgataatga-gagttgaaaaagttgattttagaggaaagtcacaaaagta 840  T
Q  154 gcttgagtatccatccgggagctacgaagatgta 187  Q
    |||| ||||| ||||||||||||||||| |||||    
T  841 gcttaagtattcatccgggagctacgaaaatgta 874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 7119 - 6997
Alignment:
Q  71 tgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||| ||||| ||||| || ||||| ||||| ||| |  |||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |||||     
T  7119 tgtgttaaggtttagaggtaggatttgtattccagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatcca 7020  T
Q  171 ggagctacgaagatgtaccacga 193  Q
    |||||||||||||||||||||||    
T  7019 ggagctacgaagatgtaccacga 6997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 187
Target Start/End: Complemental strand, 13225 - 13041
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||| |||||||   | ||||| ||| | ||||| || ||||||||||| ||  |||| || ||||| ||||    
T  13225 aagtttgtggacttgttggttgctagtaatcagactgaagacagtgattttaagatcgatgatcaaggtgtgttgagatttcgaggtaggatttgtattc 13126  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    | |||||  |||||||||| | | ||||| | ||||| ||||| |  |||| ||||||||| || || |||||||||||||||||    
T  13125 cagacaatgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttgagtattcaccctggagctacgaagatgta 13041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 215
Target Start/End: Original strand, 15897 - 16064
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||| ||||||||||| || |||||| ||||||||||||| ||| |||| |||||||| ||  | ||| |||| |  |||||| | || || |||||||    
T  15897 gattttaaggttgatgatcagggtgtgctgaggttcagaggtagagtttgtattcctgataatgaagagttgaagaagttgattcttgaggagagtcaca 15996  T
Q  148 agagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||| || ||||| || ||||||||||||    
T  15997 agagtaggttgagtattcacccgggggctacaaagatgtaccatgatttgaagaaactgttttggtgg 16064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 10604 - 10501
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||||||||||| ||| || ||||||||||||||  | ||||||||||| | | ||||||||||||| || |    
T  10604 aagtttgtggacttgttggttgctagtaatcaaactgaagatggtgacttcaaggttgatgatgaaggtgtgttgagataccgaggcagaatttgtatcc 10505  T
Q  103 ctga 106  Q
    ||||    
T  10504 ctga 10501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 215
Target Start/End: Complemental strand, 102343 - 102188
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||||||| |  | |||||||| | | ||||| | ||||| ||||| |  ||||||||||    
T  102343 gatgaccaaggtgtgttgagattccgaggtagaatttgtattcctgacgatgaggagatgaagaaaatgattcttgaagagagtcatagaagtagcttga 102244  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||||||||||||||||| ||||| || ||  |||||||| |||||||||||    
T  102243 gtatccatccgggagctacgaaaatgtatcatgatctgaaaaagttgttttggtgg 102188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 896 - 802
Alignment:
Q  138 gaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| || || ||||| ||||| |||||||||   ||||||||||||||    
T  896 gaaagtcacaagagtagcttgagtattcatccgggagctacgaaaatgtatcatgatttgaagaagctattttggtggtccggtttgaagcgtga 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 14269 - 14430
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagt 152  Q
    ||||| ||||| || || |||||| ||||  ||||||||||||| ||||||||| |  |||||||||| |||| ||||| | ||||| |||||||  |||    
T  14269 aaggtcgatgatcagggagtgttgcggtttcgaggcagaatttgtattcctgactatgatgagatgaagaaga-tgattcttgaagagagtcacagaagt 14367  T
Q  153 agcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||| |||| |||||||||||||||||| || || ||||| ||| |||||||||||    
T  14368 agcttgagtattcatcagggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 14430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 187
Target Start/End: Original strand, 4515 - 4676
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| ||| || || ||||||||||| || ||||||||||| ||| ||||  ||||||||||||||||| |  | |||||||| | |    
T  4515 tagtaatcagactgaagatggtgactttaaggttgatgaccatggtgtgttgagattccgaggtcgaatttgcattcctgacgatgaagagatgaagata 4614  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | |||||  |||| |  |||||||||||||| || ||||||||||||||||||||    
T  4615 atgattcttgaagagggtcatagaagtagcttgagtattcacccgggagctacgaagatgta 4676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 81019 - 81180
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || || || ||||| |||||||| |||||||| |||||||||||  | ||  ||||||  |||||| | ||||| ||||||||||    
T  81019 ttcaaggttgatgatcagggagtattgagattcagaggtagaatttgtattcctgacaatgaagaattgaaaaagttgattcttgaagagagtcacaaga 81118  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttgg 212  Q
    |||| |||||||| || ||||| ||||| || |||||||| || ||||| || |||||||||    
T  81119 gtagtttgagtattcacccgggggctacaaaaatgtaccatgatttgaagaaactgttttgg 81180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3409 - 3505
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttg 97  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| ||  ||  ||||||||||||| || |||||||||||||||||||| ||||||||    
T  3409 tcaagtttgtggatttgatggttgctagtaatcaaactgaagatgttgacatcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttg 3505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 17848 - 17636
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||| ||  || ||| ||||||||| ||||||| |   ||||| ||  | ||||| || || |||||||| ||| ||||||||||||| ||||    
T  17848 aagtttgtggacttgttggttgctagtaatcagactgaagataatgattttaaaatcgatgatcagggagtgttgagattctgaggcagaatttgtattc 17749  T
Q  103 ctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaa 202  Q
    ||||| |  |||||||||| | | ||||| | ||||| ||||| |  |||||||| ||||| ||||||||||||||||||||||| || ||  |||| ||    
T  17748 ctgacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttaagtattcatccgggagctacgaagatgtatcatgatctgaagaa 17649  T
Q  203 gctgttttggtgg 215  Q
    | |||||||||||    
T  17648 gttgttttggtgg 17636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30422 - 30518
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttg 97  Q
    |||||||||||||||| ||| ||| ||||||||||||||||| ||  ||  ||||||||||||| || |||||||||||||||||||| ||||||||    
T  30422 tcaagtttgtggatttgatggttgctagtaatcaaactgaagatgttgacatcaaggttgatgatcagggtgtgttgaggttcagaggaagaatttg 30518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 20513 - 20329
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||  ||||||||| ||| |||||||| |||||||| ||  ||||  |||| |  |||||| | ||||| ||||||||||    
T  20513 ttcaaggttgatgatcagggtgttctgaggttcataggaagaatttgtattcctgagaatgatgatttgaagaagttgattctagaagagagtcacaaga 20414  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| |||||||| || || || ||||| || |||||||| || ||||| || ||||||||||||   ||||| |||||||||||    
T  20413 gtagtttgagtattcacccaggggctacaaaaatgtaccatgatttgaagaatctgttttggtggtccggtttaaagcgtgatgt 20329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 23333 - 23149
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||||||||| || |||||  ||||||||| ||| |||||||| |||||||| ||  ||||  |||| |  |||||| | ||||| ||||||||||    
T  23333 ttcaaggttgatgatcagggtgttctgaggttcataggaagaatttgtattcctgagaatgatgatttgaagaagttgattctagaagagagtcacaaga 23234  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| |||||||| || || || ||||| || |||||||| || ||||| || ||||||||||||   ||||| |||||||||||    
T  23233 gtagtttgagtattcacccaggggctacaaaaatgtaccatgatttgaagaatctgttttggtggtccggtttaaagcgtgatgt 23149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 15996 - 15832
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||| || ||||| || ||||||||||| ||  |||  | |||||| ||||||||| || |||||||||| | | ||||| | ||||| |||||||  |    
T  15996 ttcaaagtcgatgatcagggtgtgttgagatttcgagatataatttgtattcctgacgacgatgagatgaagaaaatgattcttgaagagagtcacagaa 15897  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||| |||||||||||||| |||||||| || || ||||| ||| |||||||||||    
T  15896 gtagcttgagtattcatccgggagctactaagatgtatcatgatttgaagaagttgttttggtgg 15832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 112650 - 112859
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aag 124  Q
    ||||||||| ||||||| ||| ||||| ||  | ||||| |  ||||||||||| ||| |||| |||||||| ||||| ||| |  | |||||||| |||    
T  112650 tagtaatcatactgaagatggtgattttaaaatcgatgatcgaggtgtgttgagattccgaggtagaatttgtattccagacgatgaggagatgaagaag 112749  T
Q  125 attgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttg 224  Q
    || |||| | ||||| ||||| |  |||||||||||||| ||||||||||||||||||||||| || ||  |||| ||| |||||||||||  ||| |||    
T  112750 at-gattcttgaagagagtcatagaagtagcttgagtattcatccgggagctacgaagatgtatcatgatctgaagaagttgttttggtggtctgggttg 112848  T
Q  225 aagcgtgatgt 235  Q
    || ||||||||    
T  112849 aaacgtgatgt 112859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 26140 - 26315
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || ||||||||||| ||  |||| |||||||| ||||| ||| |  |||||||||| | | ||||| | ||||| ||||| |  | ||||||||    
T  26140 gatgatcaaggtgtgttgagatttcgaggtagaatttgtattccagacgatgatgagatgaagaaaatgattcttgaagagagtcatagaaatagcttga 26239  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||||||||||||||||||||| || || ||||||||| | |||||||||  ||| ||||| ||||||||    
T  26240 gtattcatccgggagctacgaagatgtatcatgatttgaaaaagttattttggtggtctgggttgaaacgtgatgt 26315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 10086 - 9925
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagt 152  Q
    ||||| ||||| || ||||||||||| ||| |||| |||||||| |||| |||| |  |||||||||| ||||| |||| | ||||| ||||| |  |||    
T  10086 aaggtcgatgaccaaggtgtgttgagattctgaggaagaatttgtattcatgacgatgatgagatgaagaagat-gattcttgaagagagtcatagaagt 9988  T
Q  153 agcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||| || ||||| ||||||||||||||||| || || ||||||||| |||||||||||    
T  9987 agcttgagcattcatccaggagctacgaagatgtatcatgatttgaaaaagttgttttggtgg 9925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 66518 - 66340
Alignment:
Q  57 gttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagct 156  Q
    |||||||| |||||||||||||| ||| ||||  | ||||||||||||||| |    |||||||| | | ||||| | ||||| ||||| |  |||||||    
T  66518 gttgatgatcacggtgtgttgagattccgaggtcggatttgcattcctgacgatgtagagatgaagaaaatgattcttgaagagagtcatagaagtagct 66419  T
Q  157 tgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||| |||||||||||| ||||| ||||| || || ||| | || ||||||  ||||||||| ||||||||    
T  66418 tgagtatccatctgggagctacgaaaatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgtgatgt 66340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 187
Target Start/End: Original strand, 38982 - 39143
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| ||| || || ||| ||||||| || ||||||||||| ||| |||   ||||||| ||||||||| |  | |||||||| | |    
T  38982 tagtaatcagactgaagatggtgactttaagcttgatgaccatggtgtgttgagattccgagatcgaatttgtattcctgacgatgaagagatgaagaaa 39081  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | ||||| | ||| |  |||||||||||||| || ||||||||||| ||||||||    
T  39082 atgattcttgaagagactcatagaagtagcttgagtattcacccgggagctacaaagatgta 39143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 57186 - 56952
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| |||||  || ||| ||||||||| |||||||  || || || || || || || |||||||||||||| ||| ||||  | |||| |||    
T  57186 tcaagtttgtagatttgttggttgctagtaatcagactgaagacggtgactttaaagtcgacgatcacggtgtgttgagattccgaggtcggatttacat 57087  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaa 200  Q
    ||||||| |    |||||||| | | ||||| | ||||| ||||| |  ||||||||||||||||| |||||||||||||||||||| ||||| || ||     
T  57086 tcctgacgatgcagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtatccacccgggagctacgaagatgtatcacgatttaaag 56987  T
Q  201 aagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| | || ||||||  ||||||||| ||||||||    
T  56986 aagattttctggtggtctggtttgaaacgtgatgt 56952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 187
Target Start/End: Original strand, 19229 - 19390
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| ||| || || || |||||||| || |||| |||||||||| ||||  | ||||||||||||||| |    |||||||| | |    
T  19229 tagtaatcagactgaagatggtgactttaaagttgatgaccatggtgcgttgaggttccgaggtcggatttgcattcctgacgatgcagagatgaagaaa 19328  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | ||| | ||||| |  |||||||||||||| |||||||||||||| ||||||||    
T  19329 atgattcttgaatagagtcatataagtagcttgagtattcatccgggagctacaaagatgta 19390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 196615 - 196801
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||||| ||||||| ||| || || || |||||||| ||  |||||||||| ||| ||||  | ||||||||    
T  196615 tcaagtttgtagacttgttggttgctagtaatcagactgaagatggtgactttaaagttgatgaccatcgtgtgttgagattccgaggtcgtatttgcat 196714  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||| |    |||||||| | | ||||| | || || || || |  |||||||||||||| || ||||||||||||||||||||    
T  196715 tcctgacgatgcagagatgaagaaaatgattcttgaggagagccatagaagtagcttgagtattcaaccgggagctacgaagatgta 196801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 2075 - 1863
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    |||||||| |||||| |||||| | | ||||| ||||| | | | || || || |||||||| || || |||||| | ||  ||||||||||||| ||||    
T  2075 aagtttgtagatttattgattggtggaaatcagactgaggatagtgactttaaagttgatgatcagggagtgttgcgatttcgaggcagaatttgtattc 1976  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
     ||||||  ||||||| || ||||| |||| | ||||| |||||||  |||||||||||||| |||||||||||||  |||||||| || || ||||| |    
T  1975 ttgacaatgatgagataaagaagat-gattctcgaagagagtcacagaagtagcttgagtattcatccgggagctataaagatgtatcatgatttgaaga 1877  T
Q  202 agctgttttggtgg 215  Q
    ||||||||||||||    
T  1876 agctgttttggtgg 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 32506 - 32687
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    |||||||| ||||| || |||||  ||||||||||||| |||||||| |||||||||||  ||||  |||| |  |||||| | ||||| ||||||||||    
T  32506 ttcaaggtagatgatcagggtgtaatgaggttcagaggaagaatttgtattcctgacaatgatgatttgaagaagttgattctagaagagagtcacaaga 32605  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtga 232  Q
    |||| |||||||| || ||||| ||||| || |||||||  ||  |||| || ||||||||||||   |||||||| |||||    
T  32606 gtagtttgagtattcacccgggggctacaaaaatgtaccgtgatctgaagaaactgttttggtggtccggtttgaaacgtga 32687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 39921 - 40110
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| | | || |||||||||||||| || || |||||||| ||  |||| |||||||| |||||| | ||  ||||  ||||||      
T  39921 tagtaatcagactgaagatagtgacttcaaggttgatgatcaaggcgtgttgagatttcgaggaagaatttgtattccttataatgatgaattgaaaaag 40020  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||| ||||| | |||||  |||||||| ||||| |||||||||||||| ||||| || || |||||||| ||  |||||||||||    
T  40021 ttgattttagaagatattcacagaagtagcttaagtattcatccgggagctacaaagatttatcatgacttgaagaaattgttttggtgg 40110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 7332 - 7496
Alignment:
Q  51 ttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaaga 150  Q
    ||||||||| |||| || |||||  ||||||||||||| ||| |||| |||||||||||  ||||  |||| |  |||||| | ||||| ||||||||||    
T  7332 ttcaaggtttatgatcagggtgttctgaggttcagaggaagagtttgtattcctgacaatgatgatttgaagaagttgattcttgaagagagtcacaaga 7431  T
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| |||||||| || ||| | ||||| |||||||| || || ||||| || ||||||||||||    
T  7432 gtaggttgagtattcacccgagggctacaaagatgtatcatgatttgaagaaactgttttggtgg 7496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 8476 - 8349
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| ||||| |||||  | ||||| || ||||| |||| | ||||| ||||||| ||||||||||    
T  8476 gatgatcaaggtgtgttgagattccgaggaagaatttgtattccagacaatgaagagattaagaagat-gattcttgaagagagtcacaggagtagcttg 8378  T
Q  159 agtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||||||||||    
T  8377 agtattcatccgggagctacgaagatgta 8349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 8283 - 8458
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttg 158  Q
    ||||| || ||||||||||| ||| |||| |||||||| |||| |||| |  |||||||||| ||||| |||| | ||||| | ||| |  ||| ||||     
T  8283 gatgatcaaggtgtgttgagattccgaggtagaatttgtattcatgacgatgatgagatgaagaagat-gattcttgaagagaatcatagaagtggctta 8381  T
Q  159 agtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||||||||||| ||||||| || || ||||||||| |||||||||||  ||| ||||| ||||||||    
T  8382 agtatccatccgggagctacgcagatgtatcatgatttgaaaaagttgttttggtggtctgggttgaaacgtgatgt 8458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 6322 - 6198
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    |||||||||| |||  |||| || ||||||||||  |||||  |||||||||| | | ||||| | ||||||||||| |  |||||||||||||||||||    
T  6322 ggtgtgttgaagtttcgaggtaggatttgcattctagacaatgatgagatgaagaaaatgattcttgaagaaagtcatagaagtagcttgagtatccatc 6223  T
Q  169 cgggagctacgaagatgtaccacga 193  Q
     |||||||| |||||||||||||||    
T  6222 tgggagctatgaagatgtaccacga 6198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 16764 - 16590
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || ||||| ||||||||  |||| |||||||||||||| ||| | | ||||||||| | | ||||| | ||||| ||||| |  ||||||||||    
T  16764 gatgatcaaggtgtcttgaggtttcgaggtagaatttgcattccagacga-tgtgagatgaagaaaatgattcttgaagagagtcatagaagtagcttga 16666  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||||||||||||||||||||| || ||  | |||||| | |||||||||  ||| ||||| ||||||||    
T  16665 gtattcatccgggagctacgaagatgtatcatgatctaaaaaagttattttggtggtctggattgaaacgtgatgt 16590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 6229 - 6315
Alignment:
Q  2 caagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagagg 88  Q
    ||||||||||||||||||| ||  ||||||||||||||||| ||| || ||||| |||||||| || |||||||| |||||||||||    
T  6229 caagtttgtggatttaatggttactagtaatcaaactgaagatggtgacttcaaagttgatgatcaaggtgtgttaaggttcagagg 6315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 6322 - 6407
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||| ||||| |||||||||||||| |||||||| || |||||||| ||  |||||||||||   |||||||| ||||||||    
T  6322 agtagcttaagtattcatccgggagctacaaagatgtatcatgacttgaagaaattgttttggtggtccggtttgaaacgtgatgt 6407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 5174 - 4986
Alignment:
Q  27 agtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aaga 125  Q
    |||||||| ||||||| | | || || ||||| ||||| || || |||||| | ||  ||||||||||||| ||||| ||| |  |||||||||| ||||    
T  5174 agtaatcagactgaagatagtgactttaaggtcgatgatcagggagtgttgcgttttcgaggcagaatttgtattccagacgatgatgagatgaagaaga 5075  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | |||| | ||||| ||||| || |||||||||||||  ||||||||||||||||||||||| || || || || ||| |||||||||||    
T  5074 t-gattcttgaagagagtcataaaagtagcttgagtaatcatccgggagctacgaagatgtatcatgatttaaagaagttgttttggtgg 4986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 6510 - 6607
Alignment:
Q  138 gaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||| |||||||| ||||| |||||||||||||| || ||||| || || ||||| |||||||||||||||  ||| ||||| ||||||||    
T  6510 gaaagtcacaaaagtagcttaagtattcatccgggagctacaaaaatgtatcatgatttgaagaagctgttttggtggtctgggttgaaacgtgatgt 6607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 10941 - 11038
Alignment:
Q  138 gaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||| |||||||| ||||| |||||||||||||| || ||||| || || ||||| |||||||||||||||  ||| ||||| ||||||||    
T  10941 gaaagtcacaaaagtagcttaagtattcatccgggagctacaaaaatgtatcatgatttgaagaagctgttttggtggtctgggttgaaacgtgatgt 11038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 27377 - 27216
Alignment:
Q  54 aaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagta 153  Q
    ||||||||||| || |||||| ||||||||| ||| ||| |||| ||||||||  |  ||||  |||| |  |||||| | || || |||||||||||||    
T  27377 aaggttgatgatcagggtgtgctgaggttcaaaggaagagtttgtattcctgatcatgatgatttgaagaagttgattcttgaggagagtcacaagagta 27278  T
Q  154 gcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    | |||||||| || ||||| ||||| ||||||||||| || ||||| || ||||||||||||    
T  27277 ggttgagtattcacccgggggctacaaagatgtaccatgatttgaagaaactgttttggtgg 27216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 10240 - 10361
Alignment:
Q  88 gcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||| ||||||||| || |||| ||||| | | ||||| | ||||| |||||||  |||||||||||||| |||||||||||||| ||||||||    
T  10240 gcagaatttgtattcctgacgacgatgacatgaagaaaatgattcttgaagagagtcacagaagtagcttgagtatacatccgggagctacaaagatgta 10339  T
Q  188 ccacgacttgaaaaagctgttt 209  Q
     || || ||||| ||| |||||    
T  10340 tcatgatttgaagaagttgttt 10361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 4969 - 4806
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| ||| ||||||||| ||||| ||| |  |||||||||| ||||| |||| | ||||| ||||| |  |||||||||||||| ||||||    
T  4969 gtgttgagattccgagccagaatttgtattccagacgatgatgagatgaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcatccg 4871  T
Q  171 ggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||| |||||||| || || ||||| ||| ||||||||| |  ||| ||||| ||||||||    
T  4870 ggagctacaaagatgtatcatgatttgaagaagttgttttggtcgtctgggttgaaacgtgatgt 4806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 12099 - 11936
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| ||| ||||||||| ||||| ||| |  |||||||||| ||||| |||| | ||||| ||||| |  |||||||||||||| ||||||    
T  12099 gtgttgagattccgagccagaatttgtattccagacgatgatgagatgaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcatccg 12001  T
Q  171 ggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||| |||||||| || || ||||| ||| ||||||||| |  ||| ||||| ||||||||    
T  12000 ggagctacaaagatgtatcatgatttgaagaagttgttttggtcgtctgggttgaaacgtgatgt 11936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 40773 - 40673
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatg 234  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||| || ||||| ||  | |||||||||  ||| ||||| |||||||    
T  40773 gaagaaagtcacaagagtagcttaagtattcatccgagagctacaaagatgtaccatgatttgaagaaatttttttggtggtctgggttgaaacgtgatg 40674  T
Q  235 t 235  Q
    |    
T  40673 t 40673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 50544 - 50412
Alignment:
Q  58 ttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagctt 157  Q
    ||||||| || ||||| ||||||||  |||| |||||||| ||||| ||  |  |||||||||| | | ||||| | ||||| ||||| |  ||||||||    
T  50544 ttgatgatcaaggtgtattgaggtttcgaggtagaatttgtattccagaagatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagctt 50445  T
Q  158 gagtatccatccgggagctacgaagatgtacca 190  Q
    |||||| ||||||||||||||||||||||||||    
T  50444 gagtattcatccgggagctacgaagatgtacca 50412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 19746 - 19585
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||||||||| |  | |||||||| | |    
T  19746 tagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtattcctgacgatgaagagatgaagaaa 19647  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | ||||| ||||| |  |||||| | ||||| || |||| |||||||||||||||    
T  19646 atgattcttgaagagagtcatagaagtagcctaagtattcacccggcagctacgaagatgta 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 35170 - 35009
Alignment:
Q  26 tagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaaga 125  Q
    ||||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||  ||||||| ||||||||  |  | |||||||| | |    
T  35170 tagtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtcgaatttgtattcctgatgatgaagagatgaagaaa 35071  T
Q  126 ttgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
     ||||| | ||||| ||||| |  |||||| | ||||| || |||| |||||||||||||||    
T  35070 atgattcttgaagagagtcatagaagtagcctaagtattcacccggcagctacgaagatgta 35009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 13578 - 13403
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| ||||| |||||||| ||| ||||  | ||||||||||||||| |    |||||||| | | ||||| | ||||| ||||| |  ||||||||||    
T  13578 gatgaccacggcgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaagaaaatgattcttgaagagagtcatagaagtagcttga 13479  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||||||||||||||||||||| ||||| || || ||| | || ||||||  |||||||||  |||||||    
T  13478 gtattcatccgggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaatgtgatgt 13403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 4253 - 4075
Alignment:
Q  57 gttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagc 155  Q
    |||||||| || |||||| |||| ||  ||||| ||||||| |||| |||| |  ||||||| || ||||| |||||||||||| ||||| |  ||||||    
T  4253 gttgatgaccaaggtgtgctgagatttcgaggccgaatttgtattcatgacgatgatgagattaagaagat-gattttggaagagagtcatagaagtagc 4155  T
Q  156 ttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||| |||  |||| |||| |||||||| ||||| ||||| ||| |||||||||||  ||| ||||| ||||||||    
T  4154 ttgagtattcatttgggatctaccaagatgtatcacgatttgaagaagttgttttggtggtctgggttgaaacgtgatgt 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 7183 - 6997
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||| ||||||||||||| ||| ||||| || || ||||| |  ||||||||||| ||| ||||  ||||||| ||    
T  7183 tcaagtttgtagacttgttggttgctagcaatcaaactgaagatggtgattttaaagtcgatgaccttggtgtgttgagattccgaggtcgaatttgtat 7084  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||  |  | |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| ||||||||||||| |||||||||    
T  7083 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcatccgggagctatgaagatgta 6997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 18440 - 18566
Alignment:
Q  89 cagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtac 188  Q
    ||||||||| ||||||||| |  |||||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || | ||||||||||||||||||     
T  18440 cagaatttgtattcctgacgatgatgagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcacctgggagctacgaagatgtat 18539  T
Q  189 cacgacttgaaaaagctgttttggtgg 215  Q
    || || ||||| ||| |||||||||||    
T  18540 catgatttgaagaagttgttttggtgg 18566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 3662 - 3828
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    |||| |||||| ||| |||| |||||||| |||||||||    ||||||||||||   ||||| | ||||| ||||| |  |||||||||||||| ||||    
T  3662 ggtgcgttgagattccgaggtagaatttgtattcctgacggtgatgagatgaaaaagatgattcttgaagagagtcatagaagtagcttgagtattcatc 3761  T
Q  169 cgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
     |||||||||||| ||||| || ||  |||| ||| |||||||||||  ||| ||||| ||||||||    
T  3762 tgggagctacgaaaatgtatcatgatctgaagaagttgttttggtggtctggattgaaacgtgatgt 3828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 28658 - 28695
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| || ||||||||||||||||||||    
T  28658 agtagcttgagtattcacccgggagctacgaagatgta 28695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 59798 - 59738
Alignment:
Q  127 tgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||| |||||||||||||||  ||||  |||||||| |||||||||||||| || |||||    
T  59798 tgattatggaagaaagtcacagaagtaatttgagtattcatccgggagctacaaaaatgta 59738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 32775 - 32944
Alignment:
Q  66 cacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatcc 165  Q
    |||||||||||||| ||| ||||  | ||||||||||||||| |    |||||||| | | ||||| | || || ||||| |  |||||||||||||| |    
T  32775 cacggtgtgttgagattccgaggtcggatttgcattcctgacgatgcagagatgaagaaaatgattcttgaggagagtcatagaagtagcttgagtattc 32874  T
Q  166 atccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||||||||||| ||||| || || ||| | || ||||||  ||||||||| || |||||    
T  32875 atccgggagctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatgt 32944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 9700 - 9531
Alignment:
Q  66 cacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatcc 165  Q
    |||||||||||||| ||| ||||  | ||||||||||||||| |    |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |    
T  9700 cacggtgtgttgagattccgaggtcggatttgcattcctgacgatgtagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattc 9601  T
Q  166 atccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| ||| |||||||||||||| ||||| || || ||| | || ||||||  ||||||||| || |||||    
T  9600 atctgggtgctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatgt 9531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 11336 - 11548
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || ||| ||||||||  ||||||| | | || ||||| || ||||| || || |||||||| ||| |||| |||||||| ||||    
T  11336 aagtttgtggatttgttggttgctagtaatccgactgaagatagtgacttcaaagtcgatgatcaaggagtgttgagattctgaggtagaatttgtattc 11435  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    | ||| |  |||||||||| ||||| || | |  |||| |||||||  ||||||||||||||||||||||||||||  |||||||| ||  | ||||| |    
T  11436 cagacgatgatgagatgaagaagat-gactcttaaagagagtcacagaagtagcttgagtatccatccgggagctagaaagatgtatcattatttgaaga 11534  T
Q  202 agctgttttggtgg 215  Q
     | |||||||||||    
T  11535 ggttgttttggtgg 11548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 17528 - 17740
Alignment:
Q  3 aagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattc 102  Q
    ||||||||||||||  || ||| ||||||||  ||||||| | | || ||||| || ||||| || || |||||||| ||| |||| |||||||| ||||    
T  17528 aagtttgtggatttgttggttgctagtaatccgactgaagatagtgacttcaaagtcgatgatcaaggagtgttgagattctgaggtagaatttgtattc 17627  T
Q  103 ctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaa 201  Q
    | ||| |  |||||||||| ||||| || | |  |||| |||||||  ||||||||||||||||||||||||||||  |||||||| ||  | ||||| |    
T  17628 cagacgatgatgagatgaagaagat-gactcttaaagagagtcacagaagtagcttgagtatccatccgggagctagaaagatgtatcattatttgaaga 17726  T
Q  202 agctgttttggtgg 215  Q
     | |||||||||||    
T  17727 ggttgttttggtgg 17740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 7162 - 7242
Alignment:
Q  135 gaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||||||||| || ||  | || ||| |||||||||||    
T  7162 gaagagagtcacagaagtagcttgagtatccatccgggagctacgaagatgtatcatgatctaaagaagatgttttggtgg 7242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 795 - 651
Alignment:
Q  71 tgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    ||||||||||||  |||| || ||||  ||||| ||| || |||||||||| | | ||||| | ||||| ||||| |  |||| ||||| ||| ||||||    
T  795 tgtgttgaggtttcgaggtaggatttctattccagacgacgatgagatgaagaaaatgattcttgaagagagtcatagaagtaacttgattattcatccg 696  T
Q  171 ggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||||||||||| || || ||||| ||| |||||||||||    
T  695 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 7198 - 7127
Alignment:
Q  156 ttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaag 227  Q
    |||||||| ||||||||||||||||| ||||| || |||||||| ||| |||||||||||  ||||||||||    
T  7198 ttgagtattcatccgggagctacgaaaatgtatcatgacttgaagaagttgttttggtggtctggtttgaag 7127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 1696 - 1611
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||| |||||||| ||||||||||||||||||||| |||| || ||||| | | ||||||| |||  ||| ||||||||||||||    
T  1696 agtagtttgagtattcatccgggagctacgaagatgcaccatgatttgaagatgttgttttgatggtctggattgaagcgtgatgt 1611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 3394 - 3309
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||| ||||||||| |||||||||||||||||||||||||||||  | || ||| |||| ||||||  ||| ||||| ||||||||    
T  3394 agtaacttgagtattcatccgggagctacgaagatgtaccacgatctaaagaagttgttctggtggtctggattgaaacgtgatgt 3309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 3607 - 3776
Alignment:
Q  66 cacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatcc 165  Q
    |||||||||||||| ||| ||||  | ||||||||||||||| |    |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| |    
T  3607 cacggtgtgttgagattccgaggtcggatttgcattcctgacgatgtagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattc 3706  T
Q  166 atccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||| ||| |||||||||||||| ||||| || || ||| | || ||||||  ||||||||| || |||||    
T  3707 atctgggtgctacgaagatgtatcacgatttaaagaagattttctggtggtctggtttgaaacgagatgt 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 22887 - 22802
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| || || ||  | |||||||||  ||||||||| || |||||    
T  22887 agtagcttgagtattcatccgggagctacgaagatgtatcacgatttaaagaaaattttttggtggtctggtttgaaacgagatgt 22802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 8810 - 8773
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8810 agtagcttgagtatccatccgggagctacgaagatgta 8773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 193
Target Start/End: Original strand, 63231 - 63360
Alignment:
Q  64 aacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtat 163  Q
    |||| ||||||||||| ||  ||||  ||||||| ||||||||| |  | |||||||| | | ||||| | ||||| ||||| |  ||||||||||||||    
T  63231 aacaaggtgtgttgagattacgaggtcgaatttgaattcctgacgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtat 63330  T
Q  164 ccatccgggagctacgaagatgtaccacga 193  Q
     || |||||||||||||||||||| |||||    
T  63331 tcacccgggagctacgaagatgtatcacga 63360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 4855 - 4943
Alignment:
Q  127 tgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||| |||||||||||||||  ||||  |||||||| |||||||||||||| || ||||| ||||| ||||| ||| | |||||||||    
T  4855 tgattctggaagaaagtcacagaagtaatttgagtattcatccgggagctacaaaaatgtatcacgatttgaagaagttattttggtgg 4943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 142 - 257
Alignment:
Q  72 gtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaa-aagattgattttggaagaaagtcacaagagtagcttgagtatccatccg 170  Q
    |||||||| ||| |||| |||||||| ||||| |||||| | ||||| || ||||| |||| | ||||| ||||| |  |||||||||||||| || |||    
T  142 gtgttgagattccgagggagaatttgtattccagacaacgaagagattaagaagat-gattcttgaagagagtcatagaagtagcttgagtattcacccg 240  T
Q  171 ggagctacgaagatgta 187  Q
    |||||||||||||||||    
T  241 ggagctacgaagatgta 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 187
Target Start/End: Complemental strand, 3337 - 3177
Alignment:
Q  27 agtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagat 126  Q
    |||||||| ||||||| ||| || || ||||| ||||| || ||||||||||| ||| ||||   |||||| ||||||||  |  | |||||||| | |     
T  3337 agtaatcagactgaagatggtgactttaaggtcgatgaccatggtgtgttgagattccgaggtttaatttgtattcctgatgatgaagagatgaagaaaa 3238  T
Q  127 tgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||| | ||||| ||||| |  |||||||||||||| || | ||||||||||||||||||    
T  3237 tgattcttgaagagagtcatagaagtagcttgagtattcacctgggagctacgaagatgta 3177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 1913 - 1849
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtg 214  Q
    |||||||||||||| ||||||||||||||||| ||||| || || ||||||||| | ||||||||    
T  1913 agtagcttgagtattcatccgggagctacgaaaatgtatcatgatttgaaaaagttattttggtg 1849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 2951 - 3137
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||  || ||| ||||||| | ||||||| ||| || || || || ||||| || ||||||||||||||| ||||  | ||||| ||    
T  2951 tcaagtttgtagacttgttggttgctagtaataagactgaagatggtgactttaaagtcgatgaccatggtgtgttgaggttccgaggtcggatttgtat 3050  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||| |    |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || |||||||||||||| |||||    
T  3051 tcctgacgatgtagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcacccgggagctacgaaaatgta 3137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 1434 - 1397
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  1434 agtagcttgagtattcatccgggagctacgaagatgta 1397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 7069 - 7004
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||||||||| ||||||||||||||||||||||| || ||  | |||||| |||||||||||    
T  7069 agtaacttgagtattcatccgggagctacgaagatgtatcatgatctaaaaaagttgttttggtgg 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 28 - 145
Alignment:
Q  69 ggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatc 168  Q
    ||||||||||| ||| ||||  ||||||| ||||||||| |  | |||||||| | | | ||| | ||||| ||||| |  |||||||||||||| || |    
T  28 ggtgtgttgagattccgaggtcgaatttgtattcctgacgatgaagagatgaagaaaataattcttgaagagagtcatagaagtagcttgagtattcacc 127  T
Q  169 cgggagctacgaagatgt 186  Q
    ||||||||||||||||||    
T  128 cgggagctacgaagatgt 145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 28055 - 27926
Alignment:
Q  48 gatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcaca 147  Q
    ||||||||| |||||||  | |||||  |||| |||||||| ||| |||| |||||||||||| ||||  |||  |  |||||| | ||||| |||||||    
T  28055 gatttcaagattgatgattagggtgtactgagattcagaggaagagtttgtattcctgacaacgatgaattgaggaagttgattcttgaagagagtcaca 27956  T
Q  148 agagtagcttgagtatccatccgggagcta 177  Q
    ||||||| |||||||| || ||||| ||||    
T  27955 agagtagattgagtattcacccgggggcta 27926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 25994 - 25957
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgta 187  Q
    |||||||||||||| |||||||||||||||||||||||    
T  25994 agtagcttgagtattcatccgggagctacgaagatgta 25957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 25006 - 25090
Alignment:
Q  151 gtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgggttggtttgaagcgtgatgt 235  Q
    ||||||||||||| |||  ||||||||| |||||||| || || ||||| ||| |||||||||||  ||| ||||| ||||||||    
T  25006 gtagcttgagtattcattagggagctacaaagatgtatcatgatttgaagaagttgttttggtggtctgggttgaaacgtgatgt 25090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 215
Target Start/End: Original strand, 14407 - 14562
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || |||||| |||||||  ||||  | ||||| ||||||||| |  |||||||||| | | ||||| | ||||| || || |  |||| |||||    
T  14407 gatgatcaaggtgtgctgaggtttcgaggtcggatttgtattcctgacgatgatgagatgaagaaaatgattcttgaagagagccatagaagtaacttga 14506  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||||||||||||||||||||||| || ||  | || ||| |||||||||||    
T  14507 gtattcatccgggagctacgaagatgtatcatgatctaaagaagttgttttggtgg 14562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 215
Target Start/End: Original strand, 19198 - 19353
Alignment:
Q  60 gatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttga 159  Q
    ||||| || |||||| |||||||  ||||  | ||||| ||||||||| |  |||||||||| | | ||||| | ||||| || || |  |||| |||||    
T  19198 gatgatcaaggtgtgctgaggtttcgaggtcggatttgtattcctgacgatgatgagatgaagaaaatgattcttgaagagagccatagaagtaacttga 19297  T
Q  160 gtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||||||||||||||||||||||| || ||  | || ||| |||||||||||    
T  19298 gtattcatccgggagctacgaagatgtatcatgatctaaagaagttgttttggtgg 19353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 8307 - 8220
Alignment:
Q  128 gattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    ||||||||| ||| |||| | |||||| |||||||| ||||| ||||| || |||||||| || || ||||| | |||||||||||||    
T  8307 gattttggacgaaggtcaaaggagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagaggctgttttggtgg 8220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 8417 - 8374
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacga 193  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||    
T  8417 agtaacttgagtattcatccgggagctacgaagatgtatcacga 8374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 79631 - 79817
Alignment:
Q  1 tcaagtttgtggatttaatgattgttagtaatcaaactgaaggtggcgatttcaaggttgatgaacacggtgtgttgaggttcagaggcagaatttgcat 100  Q
    |||||||||| || ||| || | | ||||||||| |||||||  || || || ||||| ||||| || ||||||||||| ||  |||    |||||| ||    
T  79631 tcaagtttgtagacttattggtagctagtaatcagactgaagaaggtgaatttaaggtcgatgaccatggtgtgttgagattacgagatcaaatttgtat 79730  T
Q  101 tcctgacaactatgagatgaaaagattgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgta 187  Q
    ||||||  |  | |||||||| | | ||||| | ||||| ||||| |  |||||||||||||| || ||||||||||||||||||||    
T  79731 tcctgatgatgaagagatgaagaaaatgattcttgaagagagtcatagaagtagcttgagtattcaaccgggagctacgaagatgta 79817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1715 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1715
Description:

Target: scaffold1715; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 72 - 19
Alignment:
Q  56 ggttgatgaacacggtgtgttgaggttcagaggcagaatttgcattcctgacaa 109  Q
    ||||||||| || |||||| ||||||||||||| ||| |||| |||||||||||    
T  72 ggttgatgatcagggtgtgctgaggttcagaggaagagtttgtattcctgacaa 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 7617 - 7682
Alignment:
Q  150 agtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||| ||||||||| ||||||||||||||||||||||| || ||  | || ||| |||||||||||    
T  7617 agtaacttgagtattcatccgggagctacgaagatgtatcatgatctaaagaagttgttttggtgg 7682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 3207 - 3295
Alignment:
Q  127 tgattttggaagaaagtcacaagagtagcttgagtatccatccgggagctacgaagatgtaccacgacttgaaaaagctgttttggtgg 215  Q
    |||||||||| ||| |||| |  ||||| |||||||| ||||| ||||| ||||||||||| || || ||||| | | |||||||||||    
T  3207 tgattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaacgaagatgtatcaggatttgaagaggttgttttggtgg 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University