View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_282 (Length: 251)
Name: NF9839A_low_282
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_282 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 6 - 247
Target Start/End: Original strand, 41404153 - 41404394
Alignment:
| Q |
6 |
gaaaaatatcacatttacgttgaagctataaatagaagattctggttttggcagtcaaaagaccttcaatcgtgtggctgcaatgaaatgatgtgtatga |
105 |
Q |
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| T |
41404153 |
gaaaaatatcacatttacgttgaagctataaatagtagattctggtattcgcagtcaaaagaccttcaatcgtgtggctgcaatgaaatgatgtgtatga |
41404252 |
T |
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| Q |
106 |
aagtaggaatcagaccctataagacatgtttgatagattacgagtcaattagagtcatttttggcatgtgctctactcgcaagcaattgtgttccttgac |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41404253 |
aagtaggaatcagaccctataagacatgtttgatagattacgagtcaattagagtcatttttggcatgtgctctactcgcaagcaattgtgttccttgac |
41404352 |
T |
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| Q |
206 |
ttccttctaagtcgattgaacagaaaccatatgaaatatgtg |
247 |
Q |
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| T |
41404353 |
ttccttctaagtcgattgaacagaaaccatatgaaatatgtg |
41404394 |
T |
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