View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_299 (Length: 249)

Name: NF9839A_low_299
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_299
NF9839A_low_299
[»] chr2 (21 HSPs)
chr2 (58-213)||(6760790-6760946)
chr2 (177-228)||(28846714-28846765)
chr2 (177-228)||(39715015-39715066)
chr2 (177-228)||(42327397-42327448)
chr2 (178-228)||(6859314-6859364)
chr2 (178-228)||(42860372-42860422)
chr2 (185-226)||(25637182-25637223)
chr2 (157-228)||(12994378-12994450)
chr2 (157-228)||(21213771-21213843)
chr2 (177-225)||(41202273-41202321)
chr2 (177-228)||(3001402-3001453)
chr2 (177-228)||(19244132-19244183)
chr2 (177-228)||(29197378-29197429)
chr2 (185-228)||(29503302-29503345)
chr2 (177-224)||(34041594-34041641)
chr2 (177-228)||(37480098-37480149)
chr2 (178-228)||(4262304-4262354)
chr2 (185-227)||(12801320-12801362)
chr2 (184-228)||(14500307-14500351)
chr2 (177-225)||(23230610-23230658)
chr2 (177-228)||(42922437-42922489)
[»] chr4 (33 HSPs)
chr4 (161-228)||(43623446-43623514)
chr4 (184-228)||(39509100-39509144)
chr4 (177-228)||(38869791-38869842)
chr4 (177-228)||(47044740-47044791)
chr4 (177-226)||(24827848-24827897)
chr4 (161-228)||(7292800-7292868)
chr4 (161-228)||(21660146-21660214)
chr4 (161-228)||(21668910-21668978)
chr4 (177-225)||(43728418-43728466)
chr4 (177-225)||(51948503-51948551)
chr4 (177-228)||(13015450-13015501)
chr4 (181-228)||(28635723-28635770)
chr4 (185-228)||(30938221-30938264)
chr4 (177-228)||(37109353-37109404)
chr4 (189-228)||(41346965-41347004)
chr4 (177-228)||(42644912-42644963)
chr4 (178-228)||(23377980-23378030)
chr4 (186-228)||(40813320-40813362)
chr4 (179-228)||(2622397-2622446)
chr4 (177-228)||(7949456-7949507)
chr4 (193-228)||(9936963-9936998)
chr4 (177-228)||(19238579-19238630)
chr4 (177-228)||(25869579-25869630)
chr4 (177-228)||(55427202-55427253)
chr4 (177-227)||(9241028-9241078)
chr4 (178-228)||(12821992-12822042)
chr4 (177-226)||(17618304-17618353)
chr4 (179-228)||(37274461-37274510)
chr4 (179-224)||(51954139-51954184)
chr4 (192-228)||(2185034-2185070)
chr4 (192-228)||(8306523-8306559)
chr4 (184-228)||(46329194-46329238)
chr4 (185-221)||(53496908-53496944)
[»] scaffold1367 (1 HSPs)
scaffold1367 (177-228)||(842-893)
[»] scaffold0299 (1 HSPs)
scaffold0299 (177-228)||(11551-11602)
[»] chr5 (25 HSPs)
chr5 (177-228)||(16773830-16773881)
chr5 (177-221)||(14495814-14495858)
chr5 (177-221)||(1410668-1410712)
chr5 (184-228)||(22020864-22020908)
chr5 (177-228)||(29075804-29075855)
chr5 (185-224)||(29692392-29692431)
chr5 (184-228)||(84854-84898)
chr5 (184-228)||(41165631-41165675)
chr5 (177-224)||(87429-87476)
chr5 (185-224)||(4793094-4793133)
chr5 (177-228)||(6844752-6844803)
chr5 (178-225)||(9842851-9842898)
chr5 (177-228)||(21549139-21549190)
chr5 (177-228)||(21589311-21589362)
chr5 (177-228)||(30109310-30109361)
chr5 (189-228)||(43442231-43442270)
chr5 (179-228)||(14285186-14285235)
chr5 (161-225)||(30883203-30883268)
chr5 (179-228)||(36958124-36958173)
chr5 (161-225)||(43241687-43241752)
chr5 (185-225)||(12883871-12883911)
chr5 (177-213)||(15641809-15641845)
chr5 (184-216)||(17761369-17761401)
chr5 (161-228)||(34984812-34984880)
chr5 (184-228)||(37258368-37258412)
[»] chr3 (38 HSPs)
chr3 (177-228)||(4844513-4844564)
chr3 (177-228)||(4870209-4870260)
chr3 (184-228)||(44743857-44743901)
chr3 (177-228)||(2667885-2667936)
chr3 (177-228)||(4222164-4222215)
chr3 (177-228)||(51903880-51903931)
chr3 (179-228)||(10445141-10445190)
chr3 (177-229)||(9557343-9557395)
chr3 (184-228)||(30311336-30311380)
chr3 (161-228)||(36720387-36720455)
chr3 (178-225)||(13808890-13808937)
chr3 (177-228)||(14339633-14339684)
chr3 (177-228)||(29563923-29563974)
chr3 (177-228)||(47454619-47454670)
chr3 (179-225)||(8501578-8501624)
chr3 (178-228)||(37051296-37051346)
chr3 (182-228)||(39253725-39253771)
chr3 (179-224)||(31520611-31520656)
chr3 (187-228)||(52769985-52770026)
chr3 (177-229)||(11612322-11612374)
chr3 (157-228)||(12761514-12761586)
chr3 (184-228)||(15048063-15048107)
chr3 (184-228)||(28703406-28703450)
chr3 (177-228)||(10499111-10499162)
chr3 (177-228)||(21960574-21960625)
chr3 (178-213)||(31788987-31789022)
chr3 (177-228)||(37788467-37788518)
chr3 (177-224)||(46518651-46518698)
chr3 (178-228)||(11090167-11090217)
chr3 (178-224)||(27259185-27259231)
chr3 (190-228)||(45229270-45229308)
chr3 (177-218)||(28531070-28531111)
chr3 (184-221)||(31608533-31608570)
chr3 (176-221)||(47860778-47860823)
chr3 (184-224)||(7975448-7975488)
chr3 (161-224)||(17108904-17108968)
chr3 (184-228)||(47279406-47279450)
chr3 (161-224)||(49494152-49494216)
[»] chr1 (39 HSPs)
chr1 (178-228)||(12587294-12587344)
chr1 (161-228)||(15786322-15786390)
chr1 (178-228)||(12259284-12259334)
chr1 (177-225)||(9165200-9165248)
chr1 (177-228)||(7219920-7219971)
chr1 (177-228)||(8177184-8177235)
chr1 (177-228)||(33700775-33700826)
chr1 (177-228)||(51703802-51703853)
chr1 (177-228)||(51814517-51814568)
chr1 (178-224)||(9964462-9964508)
chr1 (176-220)||(2069678-2069721)
chr1 (184-228)||(2799892-2799936)
chr1 (184-228)||(9117149-9117193)
chr1 (161-228)||(16169980-16170048)
chr1 (161-224)||(25297778-25297842)
chr1 (177-228)||(6650618-6650669)
chr1 (177-228)||(8904437-8904488)
chr1 (177-228)||(12662305-12662356)
chr1 (177-228)||(16893417-16893468)
chr1 (181-220)||(17439944-17439983)
chr1 (177-228)||(19528329-19528380)
chr1 (177-228)||(27223132-27223183)
chr1 (177-228)||(31383800-31383851)
chr1 (177-224)||(47720853-47720900)
chr1 (177-224)||(47727845-47727892)
chr1 (177-224)||(47753737-47753784)
chr1 (177-228)||(52336776-52336827)
chr1 (178-228)||(521242-521292)
chr1 (178-228)||(3265948-3265998)
chr1 (177-211)||(44046167-44046201)
chr1 (184-224)||(952541-952581)
chr1 (176-220)||(2074024-2074067)
chr1 (184-228)||(6122824-6122868)
chr1 (184-220)||(12370193-12370229)
chr1 (180-228)||(24216997-24217044)
chr1 (177-225)||(40257422-40257470)
chr1 (185-221)||(41508862-41508898)
chr1 (177-221)||(44126418-44126462)
chr1 (177-225)||(52116786-52116834)
[»] scaffold0258 (1 HSPs)
scaffold0258 (161-228)||(15325-15393)
[»] chr7 (32 HSPs)
chr7 (161-228)||(22760869-22760937)
chr7 (177-228)||(48771961-48772012)
chr7 (184-228)||(9871288-9871332)
chr7 (184-228)||(45709710-45709754)
chr7 (177-228)||(8108604-8108655)
chr7 (177-228)||(20335833-20335884)
chr7 (177-228)||(25590634-25590685)
chr7 (177-228)||(26459412-26459463)
chr7 (178-225)||(26703149-26703196)
chr7 (182-228)||(3174955-3175001)
chr7 (177-227)||(7801203-7801253)
chr7 (190-228)||(9183193-9183231)
chr7 (178-228)||(23552142-23552192)
chr7 (179-228)||(17041014-17041063)
chr7 (177-222)||(21854571-21854616)
chr7 (177-226)||(41519268-41519317)
chr7 (161-228)||(43215190-43215258)
chr7 (187-234)||(21410706-21410753)
chr7 (177-220)||(25021345-25021388)
chr7 (177-228)||(25655230-25655281)
chr7 (177-228)||(37085551-37085602)
chr7 (177-228)||(43590930-43590981)
chr7 (196-225)||(27776214-27776243)
chr7 (179-228)||(29916810-29916859)
chr7 (184-228)||(5934151-5934195)
chr7 (161-228)||(7499926-7499994)
chr7 (184-228)||(9608631-9608675)
chr7 (184-228)||(9836203-9836247)
chr7 (161-228)||(18056777-18056845)
chr7 (184-228)||(29785303-29785347)
chr7 (180-228)||(42814887-42814934)
chr7 (184-228)||(49050493-49050537)
[»] chr6 (18 HSPs)
chr6 (161-228)||(33549110-33549178)
chr6 (177-228)||(24641192-24641243)
chr6 (177-228)||(34786456-34786507)
chr6 (151-228)||(30127396-30127474)
chr6 (157-228)||(11423568-11423640)
chr6 (177-228)||(12234509-12234560)
chr6 (189-228)||(13227160-13227199)
chr6 (177-224)||(31622997-31623044)
chr6 (177-213)||(9433607-9433643)
chr6 (184-228)||(20213071-20213115)
chr6 (184-228)||(22107094-22107138)
chr6 (183-227)||(23910114-23910158)
chr6 (177-228)||(6385885-6385936)
chr6 (177-220)||(6776617-6776660)
chr6 (177-228)||(10338176-10338227)
chr6 (178-228)||(3172770-3172820)
chr6 (178-228)||(12633033-12633083)
chr6 (163-224)||(13661529-13661590)
[»] chr8 (24 HSPs)
chr8 (177-228)||(968385-968436)
chr8 (177-228)||(16852363-16852414)
chr8 (177-225)||(23361654-23361702)
chr8 (177-228)||(29858051-29858102)
chr8 (178-228)||(34628666-34628716)
chr8 (177-228)||(20994459-20994511)
chr8 (177-225)||(30483889-30483937)
chr8 (184-228)||(35641903-35641947)
chr8 (177-228)||(3624603-3624654)
chr8 (177-228)||(7140732-7140783)
chr8 (177-228)||(11492075-11492126)
chr8 (177-228)||(19703489-19703540)
chr8 (177-228)||(35690066-35690117)
chr8 (177-228)||(38661902-38661953)
chr8 (178-228)||(31087260-31087310)
chr8 (177-222)||(2203515-2203560)
chr8 (185-225)||(4830518-4830558)
chr8 (177-225)||(6536543-6536591)
chr8 (178-210)||(6569791-6569823)
chr8 (184-228)||(11819806-11819850)
chr8 (192-228)||(11928733-11928769)
chr8 (180-228)||(22193366-22193414)
chr8 (184-228)||(27750760-27750804)
chr8 (180-228)||(35583625-35583673)
[»] scaffold0194 (1 HSPs)
scaffold0194 (177-228)||(13048-13099)
[»] scaffold0070 (1 HSPs)
scaffold0070 (177-228)||(42522-42573)
[»] scaffold0291 (1 HSPs)
scaffold0291 (188-228)||(2472-2512)
[»] scaffold0211 (1 HSPs)
scaffold0211 (177-228)||(24076-24127)
[»] scaffold0122 (1 HSPs)
scaffold0122 (177-228)||(6921-6972)
[»] scaffold0044 (1 HSPs)
scaffold0044 (177-228)||(92970-93021)
[»] scaffold0009 (1 HSPs)
scaffold0009 (177-228)||(19849-19900)
[»] scaffold0118 (1 HSPs)
scaffold0118 (177-225)||(41638-41686)
[»] scaffold0047 (1 HSPs)
scaffold0047 (161-228)||(14974-15041)
[»] scaffold0021 (1 HSPs)
scaffold0021 (177-213)||(157004-157040)
[»] scaffold0002 (1 HSPs)
scaffold0002 (177-225)||(94976-95024)


Alignment Details
Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 6760790 - 6760946
Alignment:
Q  58 atgtgatggaaggaagatttgtctgacttgtataccatataatataattgatgacgtatatatttaaattgaatgtaaatgtgtgacgtatatatttagc 157  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  6760790 atgtgatggaaggaagacttgtttgacttgtgtaccatataatataattgatggcgtatatatttaaattgaatgtaaatatgtgacgtatatatttagc 6760889  T
Q  158 ccgcttgggttagtcttgt-gtattgacttgggatctgggagtgtgctcctcctcga 213  Q
    || |||||||| |||| || ||||||  ||||||||||||||| |||||||| ||||    
T  6760890 ccacttgggttggtctggtagtattggtttgggatctgggagtatgctcctcatcga 6760946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 28846714 - 28846765
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  28846714 gtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgat 28846765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 39715015 - 39715066
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  39715015 gtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgat 39715066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 42327448 - 42327397
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  42327448 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgat 42327397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 6859364 - 6859314
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||||||    
T  6859364 tattgacttgtgatatgggagtgtgctcctcttcaaagtctcaggttcgat 6859314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 42860372 - 42860422
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||| || |||||||||||||||||||||| |||||| |||||||    
T  42860372 tattgacttgagacctgggagtgtgctcctcctcgaggtctcaagttcgat 42860422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 25637182 - 25637223
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcaggttcg 226  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  25637182 ttgggatctgggagtgtgctccttctcgaggtctcaggttcg 25637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 12994450 - 12994378
Alignment:
Q  157 cccgcttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| ||| |||| ||| ||||||||||||| |||||||||||||||||||  | |||||| |||||||    
T  12994450 cccgcttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgat 12994378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 21213771 - 21213843
Alignment:
Q  157 cccgcttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||| |||||| |||| ||| ||||| ||||||| ||||||||||| ||||||| || ||||||||||||||    
T  21213771 cccgcatgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgat 21213843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 41202273 - 41202321
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||||| || ||||||||||| |||||||||||||||||| ||||||    
T  41202273 gtattgacctgagatctgggagtatgctcctcctcgaagtcttaggttc 41202321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 3001402 - 3001453
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||| ||||| |||||||||||||||| ||  |||||||||||||    
T  3001402 gtattgacttgagatctaggagtgtgctcctccttgagatctcaggttcgat 3001453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 19244132 - 19244183
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| ||| |||||||||||||| | | ||||||||||||||    
T  19244132 gtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgat 19244183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 29197429 - 29197378
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||  |||||||||||||||||| || |||||| |||||||    
T  29197429 gtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgat 29197378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 29503302 - 29503345
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||| | ||||||||||||||    
T  29503302 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgat 29503345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 34041641 - 34041594
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||||||| ||||||| |||||||||||||||| | ||||||||||    
T  34041641 gtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtt 34041594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 37480098 - 37480149
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| ||| |||||||||||||||| | ||||||||||||||    
T  37480098 gtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgat 37480149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 4262354 - 4262304
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||| ||||||| |||| ||||||||||||||| | ||||||||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgat 4262304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 12801320 - 12801362
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcaggttcga 227  Q
    |||||||||||| || ||||||||||| |||||||||||||||    
T  12801320 ttgggatctgggggtatgctcctcctcaaagtctcaggttcga 12801362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 14500307 - 14500351
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||||||||||||||||||||||| | ||||||| ||||||    
T  14500307 cttgagatctgggagtgtgctcctcctctaggtctcagattcgat 14500351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 23230658 - 23230610
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    ||||||| |||||| |||||||||||||||||||| ||||  |||||||    
T  23230658 gtattgatttgggaactgggagtgtgctcctcctcaaagttccaggttc 23230610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 42922437 - 42922489
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaa-gtctcaggttcgat 228  Q
    |||||| ||||| | |||||||||||||||||||| || ||||||||||||||    
T  42922437 gtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgat 42922489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 43623514 - 43623446
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||| ||| |||||||||| |||| ||||||||||||||||| |||||||||||||||||    
T  43623514 cttgggttagtctagtgatattgacttgagatcagggagtgtgctcctccttgaagtctcaggttcgat 43623446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 39509100 - 39509144
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  39509100 cttgggatctgggagtgtgctcctcctcgaggtctcaggttcgat 39509144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 38869791 - 38869842
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  38869791 gtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgat 38869842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 47044740 - 47044791
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  47044740 gtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgat 47044791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24827848 - 24827897
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcg 226  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  24827848 gtattgacttgggacctgggagtgcgctcctcctcgaggtctcaggttcg 24827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 7292868 - 7292800
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| ||||| ||||| | |||||||||||||||||||| ||||||||||||||||    
T  7292868 cttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgat 7292800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 21660214 - 21660146
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| |||||||||| ||||||||||||||||| ||||||| |||||| |||||||    
T  21660214 cttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgat 21660146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 21668978 - 21668910
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| |||||||||| ||||||||||||||||| ||||||| |||||| |||||||    
T  21668978 cttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgat 21668910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 43728418 - 43728466
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  43728418 gtattgacttatgatctgggagtgtgctcctcctcaaagtctcaggttc 43728466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 51948503 - 51948551
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  51948503 gtattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttc 51948551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 13015450 - 13015501
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||  |||||||||||||||||||||||||||| |||||||    
T  13015450 gtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgat 13015501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 28635723 - 28635770
Alignment:
Q  181 tgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||    
T  28635723 tgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgat 28635770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 30938264 - 30938221
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  30938264 ttgggatcttggagtgtgctcctcctcgaggtctcaggttcgat 30938221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 37109404 - 37109353
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  37109404 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgat 37109353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 41347004 - 41346965
Alignment:
Q  189 gatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  41347004 gatctgggagtatgctcctcctcgaagtctcaggttcgat 41346965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 42644963 - 42644912
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||| ||||||| || ||||| ||||||||||||||||    
T  42644963 gtattgacttgggatctgagagtgtgttcttcctcaaagtctcaggttcgat 42644912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 23377980 - 23378030
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgat 23378030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 40813362 - 40813320
Alignment:
Q  186 tgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  40813362 tgggatctgggagtgtgctccttttcgaagtctcaggttcgat 40813320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 2622446 - 2622397
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  2622446 attggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgat 2622397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 7949507 - 7949456
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| || ||||||||||||||||| | ||||||||||||||    
T  7949507 gtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgat 7949456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 9936998 - 9936963
Alignment:
Q  193 tgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||| |||||||||||    
T  9936998 tgggagtgtgctcctcctcgaagtttcaggttcgat 9936963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 19238630 - 19238579
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||  ||||||||||||||||||||| ||||| ||||||||    
T  19238630 gtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgat 19238579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 25869630 - 25869579
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||| |||||| |||||||||||||||| |||||| | |||||||    
T  25869630 gtattgacttgagatctgagagtgtgctcctcctcaaagtcttatgttcgat 25869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 55427253 - 55427202
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| |||||||| ||||||| ||||| ||||||||||||||    
T  55427253 gtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgat 55427202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 9241078 - 9241028
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcga 227  Q
    |||||| |||||||||||| ||||||||||| ||||| |||| ||||||||    
T  9241078 gtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggttcga 9241028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 12821992 - 12822042
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||||||||  || | ||||||| ||||||    
T  12821992 tattgacttgggatctgggagtgtgctcctgttcaaggtctcagattcgat 12822042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 17618304 - 17618353
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcg 226  Q
    |||||| |||| || |||||||||||||||||||||| |||||| |||||    
T  17618304 gtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttcg 17618353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 37274510 - 37274461
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||||||| |||||||||||||||||||| | |||| |||||||||    
T  37274510 attggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgat 37274461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 51954139 - 51954184
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||||||    
T  51954139 attgacttgggacttgggagtatgctcctcctcgaggtctcaggtt 51954184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 2185070 - 2185034
Alignment:
Q  192 ctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  2185070 ctgggagtgtgctccttctcaaagtctcaggttcgat 2185034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 8306523 - 8306559
Alignment:
Q  192 ctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||||| | |||||||    
T  8306523 ctgggagtgtgctcctcctcgaagtcttaagttcgat 8306559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 46329194 - 46329238
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||| |||||||||||||||||||| | || |||||||||||    
T  46329194 cttgggacctgggagtgtgctcctcctcaaggtatcaggttcgat 46329238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 53496908 - 53496944
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcag 221  Q
    |||||| |||||||||||||||||||| |||||||||    
T  53496908 ttgggacctgggagtgtgctcctcctcaaagtctcag 53496944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 893 - 842
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  893 gtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgat 842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 11551 - 11602
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  11551 gtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgat 11602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 16773830 - 16773881
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  16773830 gtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgat 16773881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 14495858 - 14495814
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcag 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  14495858 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcag 14495814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 1410712 - 1410668
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcag 221  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  1410712 gtattgacttgggatatgggagtgtgctcctcctcgaggtctcag 1410668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 22020908 - 22020864
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||    
T  22020908 cttgggatctgggagtgtgctcctccttgaagtctcagattcgat 22020864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 29075804 - 29075855
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||||||||||||||||||||||||||  ||||| |||||||    
T  29075804 gtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgat 29075855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 29692431 - 29692392
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  29692431 ttgggatctgggagtgtgctcctcctcaaagtctcaggtt 29692392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 84854 - 84898
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||||||| | |||||| |||||||    
T  84854 cttgggatctgggagtgtgctcctcctcaaggtctcaagttcgat 84898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 41165675 - 41165631
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||| |||||||||| || ||||||    
T  41165675 cttgggatctgggagtgtgctccttctcgaagtcttagattcgat 41165631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 87476 - 87429
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||| ||||| |||||||||||||||||||||| | ||||||||||    
T  87476 gtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtt 87429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 4793133 - 4793094
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  4793133 ttgggacctgggagtgtgctcctcctcgaggtctcaggtt 4793094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 6844752 - 6844803
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||| || |||||||||| |||||||||| |||| |||||||||    
T  6844752 gtattgacttggaatttgggagtgtgttcctcctcgaggtctaaggttcgat 6844803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 9842898 - 9842851
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||||||||||  ||||||||||||||||||||| ||||| |||||    
T  9842898 tattgacttgggacttgggagtgtgctcctcctcgaggtctcgggttc 9842851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 21549190 - 21549139
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| |||||||||||||||||||  |||||||| |||||||    
T  21549190 gtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgat 21549139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 21589311 - 21589362
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| |||||||| |||| |||||||| ||||||||||||||    
T  21589311 gtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgat 21589362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 30109361 - 30109310
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||| || ||||||||||||||||||| || ||||||||||||||    
T  30109361 gtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgat 30109310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 43442231 - 43442270
Alignment:
Q  189 gatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  43442231 gatctgggagtgtgctcctcctcaaggtctcaggttcgat 43442270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 14285186 - 14285235
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||||| | |||||||||||||||||||| | ||||||||||||||    
T  14285186 attggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgat 14285235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 30883268 - 30883203
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||||| |||| ||| ||||| ||||||| |||||||||||||||||||| | |||||| ||||    
T  30883268 cttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttc 30883203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 36958173 - 36958124
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| |||| ||| |||||||||| ||||| |||||||||||||||||||    
T  36958173 attggcttgagatttgggagtgtgttcctcatcgaagtctcaggttcgat 36958124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 43241752 - 43241687
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||||| |||| ||| |||||||||||||||| ||||||||| | |||| || |||||||||||    
T  43241752 cttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggtctcaggttc 43241687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 12883871 - 12883911
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||||||||||||||||||||||| || |||||| ||||    
T  12883871 ttgggatctgggagtgtgctcctccttgaggtctcatgttc 12883911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 15641845 - 15641809
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcga 213  Q
    |||||||||||||| |||||||||||||| |||||||    
T  15641845 gtattgacttgggacctgggagtgtgctcgtcctcga 15641809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 17761401 - 17761369
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagt 216  Q
    ||||||||||||||||||||||||||| |||||    
T  17761401 cttgggatctgggagtgtgctcctccttgaagt 17761369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 34984812 - 34984880
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| ||||| ||||| | |||||||||||||||||||| | |||| |||||||||    
T  34984812 cttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgat 34984880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 37258412 - 37258368
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||| ||||||||||||||||| | || |||||||||||    
T  37258412 cttgggatctaggagtgtgctcctcctcaaggtttcaggttcgat 37258368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 4844564 - 4844513
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  4844564 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgat 4844513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 4870260 - 4870209
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  4870260 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgat 4870209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 44743901 - 44743857
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  44743901 cttgggatctgggagtgtgctcctcctcgaggtctcaggttcgat 44743857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 2667885 - 2667936
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||||||||    
T  2667885 gtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgat 2667936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 4222164 - 4222215
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  4222164 gtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgat 4222215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 51903931 - 51903880
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  51903931 gtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgat 51903880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 10445190 - 10445141
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||    
T  10445190 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgat 10445141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 9557343 - 9557395
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgatg 229  Q
    |||||| ||||||||||| ||||||||||||||||||  ||||||||||||||    
T  9557343 gtattggcttgggatctgagagtgtgctcctcctcgagatctcaggttcgatg 9557395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 30311336 - 30311380
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||||||| | ||||||||||||||    
T  30311336 cttgggatctgggagtgtgctcctcctcaaggtctcaggttcgat 30311380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 36720387 - 36720455
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| ||||| |||||||| ||||||||||||||||||||| || |||||||||||    
T  36720387 cttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgat 36720455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 13808937 - 13808890
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||    
T  13808937 tattgacttgggatctggcagtgtgctcctcctctaggtctcaggttc 13808890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 14339633 - 14339684
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||| ||||||||||||||||||| | ||||||||||||||    
T  14339633 gtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgat 14339684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 29563923 - 29563974
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||| ||||||| |||||||| |||||||||||||||||||||||    
T  29563923 gtattggcttgagatctggaagtgtgcttctcctcgaagtctcaggttcgat 29563974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 47454670 - 47454619
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||| ||||| ||||||||||||||||||| ||||||||||||||    
T  47454670 gtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgat 47454619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 8501624 - 8501578
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  8501624 attgacttgagatctgggagtgtgctcctcctcaaagtttcaggttc 8501578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 37051346 - 37051296
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||| |||||||  ||||||||||||||||    
T  37051346 tattgatttgggatctgggagtgtgttcctccttaaagtctcaggttcgat 37051296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 39253725 - 39253771
Alignment:
Q  182 gacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||    
T  39253725 gacttgggatctgggagtgtgctcctcttcaaggtctcaggttcgat 39253771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 31520656 - 31520611
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||| |||||||||||||||||||||||||||||| |||| |||||    
T  31520656 attggcttgggatctgggagtgtgctcctcctcgaggtcttaggtt 31520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 52770026 - 52769985
Alignment:
Q  187 gggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgat 52769985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 11612322 - 11612374
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgatg 229  Q
    ||||| |||||||| |||||||||||||||||||  | |||||||||||||||    
T  11612322 gtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttcgatg 11612374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 12761514 - 12761586
Alignment:
Q  157 cccgcttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||| |||||| |||| ||| ||||||||||||| ||||||||||| ||||||| ||  |||||||||||||    
T  12761514 cccgcatgggttggtctggtggtattgacttgggacctgggagtgtgttcctccttgagctctcaggttcgat 12761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 15048107 - 15048063
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||    
T  15048107 cttgggatctgggaatgtgctcctcctcaaggtctcaggttcgat 15048063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 28703450 - 28703406
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||| || | ||||||||||||||    
T  28703450 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgat 28703406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 10499162 - 10499111
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||| ||||| |||| || ||||||||||||||    
T  10499162 gtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgat 10499111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 21960574 - 21960625
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| ||| |||||||||||||||||| ||||||| ||||||    
T  21960574 gtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgat 21960625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 31789022 - 31788987
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcga 213  Q
    ||||| ||||||||||||||||||||||||||||||    
T  31789022 tattggcttgggatctgggagtgtgctcctcctcga 31788987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 37788518 - 37788467
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||| | || ||||||||||||||||| | ||||||||||||||    
T  37788518 gtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgat 37788467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 46518651 - 46518698
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||| |||||||||||||||||||||||||||| | || |||||||    
T  46518651 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtt 46518698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 11090217 - 11090167
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||| |||||||||||||| ||||||||||||||| |||| || ||||||    
T  11090217 tattggcttgggatctgggaatgtgctcctcctcgaggtcttagtttcgat 11090167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 27259185 - 27259231
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    ||||| ||||||| |||||||||||||||||||||| || |||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtt 27259231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 45229270 - 45229308
Alignment:
Q  190 atctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  45229270 atctgggagtgtgctcctcctcgtggtctcaggttcgat 45229308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 28531111 - 28531070
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtct 218  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtct 28531070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 31608570 - 31608533
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcag 221  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  31608570 cttgagatctgggagtgtgctcctcctcgaggtctcag 31608533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 47860778 - 47860823
Alignment:
Q  176 tgtattgacttgggatctgggagtgtgctcctcctcgaagtctcag 221  Q
    ||||||| ||| |||||| ||||||||||||||||| |||||||||    
T  47860778 tgtattggctttggatctaggagtgtgctcctcctcaaagtctcag 47860823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 7975448 - 7975488
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||||||||||||||||||||||||| | |||| |||||    
T  7975448 cttgggatctgggagtgtgctcctcctcaaggtcttaggtt 7975488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 17108968 - 17108904
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    ||||||||||| | ||| |||||||| | ||| ||||||||||||||||||| | ||||||||||    
T  17108968 cttgggttagtttggtggtattgactggagatgtgggagtgtgctcctcctcaaggtctcaggtt 17108904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 47279450 - 47279406
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||||||  | |||||| |||||||    
T  47279450 cttgggatctgggagtgtgctcctccttaaggtctcatgttcgat 47279406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 49494216 - 49494152
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||||||| || ||| ||||||||||  || ||||||||||||| ||||||| ||||||||||    
T  49494216 cttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcctcgaggtctcaggtt 49494152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 12587294 - 12587344
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgat 12587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 15786390 - 15786322
Alignment:
Q  161 cttgggttagtcttgt-gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| || |||||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  15786390 cttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgat 15786322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 12259284 - 12259334
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  12259284 tattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttcgat 12259334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 9165248 - 9165200
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  9165248 gtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttc 9165200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 7219971 - 7219920
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||||  || |||||||||||||||||||||||||||||||||    
T  7219971 gtattgacctgggacatgagagtgtgctcctcctcgaagtctcaggttcgat 7219920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 8177235 - 8177184
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||||||||||| | || |||||||||||    
T  8177235 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgat 8177184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 33700826 - 33700775
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||| |||||||||||||||||||||| | ||||||||||||||    
T  33700826 gtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgat 33700775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 51703802 - 51703853
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||||||||    
T  51703802 gtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgat 51703853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 51814517 - 51814568
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||| |||||| |||||||||||||||| | ||||||||||||||    
T  51814517 gtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgat 51814568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 9964462 - 9964508
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||    
T  9964462 tattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtt 9964508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 2069678 - 2069721
Alignment:
Q  176 tgtattgacttgggatctgggagtgtgctcctcctcgaagtctca 220  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  2069678 tgtattgacttgggatctggca-tgtgctcctcctcgaagtctca 2069721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 2799892 - 2799936
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||    
T  2799892 cttgagatctgggagtgtgctcctcctcaaggtctcaggttcgat 2799936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 9117149 - 9117193
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||| |||||||||||||| || ||||||||||||||    
T  9117149 cttgggatctggaagtgtgctcctccttgaggtctcaggttcgat 9117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 16170048 - 16169980
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||| || ||| ||||||||||||| ||||||||||| |||||||| | || |||||||||||    
T  16170048 cttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgat 16169980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 25297778 - 25297842
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||||| |||| ||| ||||||||| ||||||| |||||||||||||||||| |||| |||||    
T  25297778 cttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtt 25297842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 6650618 - 6650669
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||||| |||||| ||||||||||| | ||||||||||||||    
T  6650618 gtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgat 6650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 8904437 - 8904488
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||| || |||||||||||||||| | |||||| |||||||    
T  8904437 gtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgat 8904488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 12662305 - 12662356
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||| |||  || ||||||||||||||||| ||||||||||||||    
T  12662305 gtattgacttgtgatacggaagtgtgctcctcctcgatgtctcaggttcgat 12662356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 16893417 - 16893468
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||| ||| ||||||||| ||||||||||| ||||||||||||||    
T  16893417 gtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgat 16893468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 17439944 - 17439983
Alignment:
Q  181 tgacttgggatctgggagtgtgctcctcctcgaagtctca 220  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  17439944 tgacttaggatctgggagtgtgctcctcctcgaggtctca 17439983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 19528380 - 19528329
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||||||  |||||||||||||||| | ||||||||||||||    
T  19528380 gtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgat 19528329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 27223183 - 27223132
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||| |||||||||||||||||| || || | ||||||||||||||    
T  27223183 gtattgacttaggatctgggagtgtgctcttcttcaaggtctcaggttcgat 27223132  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 31383851 - 31383800
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| ||||||||||||||||||| |  ||||||||||||||    
T  31383851 gtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgat 31383800  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 47720853 - 47720900
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||||||||    
T  47720853 gtattgacttgagatataggagtgtgctcctcctcaaagtctcaggtt 47720900  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 47727845 - 47727892
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||||||||    
T  47727845 gtattgacttgagatataggagtgtgctcctcctcaaagtctcaggtt 47727892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 47753737 - 47753784
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    ||||||||||||||||| ||| ||||||||||||| | ||||||||||    
T  47753737 gtattgacttgggatctaggactgtgctcctcctcaaggtctcaggtt 47753784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 52336827 - 52336776
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||||||||||  |  |||||||||||||    
T  52336827 gtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgat 52336776  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 521242 - 521292
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||| ||| |||| |||||||||||||  ||||||||||||||||    
T  521242 tattgacttgagatttgggggtgtgctcctccttaaagtctcaggttcgat 521292  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 3265948 - 3265998
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||| |  ||||||||||||||||||| | ||||||||||||||    
T  3265948 tattgacttggaacttgggagtgtgctcctcctcaaggtctcaggttcgat 3265998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 44046201 - 44046167
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctc 211  Q
    |||||| ||||||||||||||||||||||||||||    
T  44046201 gtattggcttgggatctgggagtgtgctcctcctc 44046167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 952541 - 952581
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    ||||||| |||||||||||||| ||||| ||||||||||||    
T  952541 cttgggacctgggagtgtgctcatcctcaaagtctcaggtt 952581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 2074024 - 2074067
Alignment:
Q  176 tgtattgacttgggatctgggagtgtgctcctcctcgaagtctca 220  Q
    |||||||||||||||||| |  |||||||||||||||||||||||    
T  2074024 tgtattgacttgggatctagc-gtgtgctcctcctcgaagtctca 2074067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 6122824 - 6122868
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||  ||||||||||||||||||| | ||||||||||||||    
T  6122824 cttgggacttgggagtgtgctcctcctcaaggtctcaggttcgat 6122868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 12370193 - 12370229
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctca 220  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  12370193 cttgggacctgggagtgtgctcctcctcgaggtctca 12370229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 24216997 - 24217044
Alignment:
Q  180 ttgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| ||||||||||||| ||| | ||||||||||||||    
T  24216997 ttgacttgggatcttggagtgtgctcct-ctcaaggtctcaggttcgat 24217044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 40257422 - 40257470
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||| |||| || |||||||||||||||||||||| |||||| ||||    
T  40257422 gtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttc 40257470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 41508862 - 41508898
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcag 221  Q
    ||||||||||||||||||||||||||| | |||||||    
T  41508862 ttgggatctgggagtgtgctcctcctcaaggtctcag 41508898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 44126418 - 44126462
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcag 221  Q
    |||||||| ||||| |||||||||||||||||| ||| |||||||    
T  44126418 gtattgacctgggacctgggagtgtgctcctccacgaggtctcag 44126462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 52116834 - 52116786
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||| |||||||  ||||||||||||||||||| | |||||||||||    
T  52116834 gtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttc 52116786  T

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Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 15393 - 15325
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||    
T  15393 cttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgat 15325  T

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Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 22760869 - 22760937
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| ||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  22760869 cttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgat 22760937  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 48771961 - 48772012
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  48771961 gtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgat 48772012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 9871332 - 9871288
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||    
T  9871332 cttgggatttgggagtgtgctcctcctcgaagtctcagattcgat 9871288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 45709754 - 45709710
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||    
T  45709754 cttgggatctgagagtgtgctcctcctcgaggtctcaggttcgat 45709710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 8108604 - 8108655
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||| |||||||| ||||||||| || ||||||||||||||    
T  8108604 gtattgacttgggatatgggagtgcgctcctccttgaggtctcaggttcgat 8108655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 20335884 - 20335833
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||  ||||||||||||||||||||| ||||||||||||||    
T  20335884 gtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgat 20335833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 25590634 - 25590685
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||| ||||||||||||||||||||||||| ||||| ||||||||    
T  25590634 gtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgat 25590685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 26459463 - 26459412
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  26459463 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgat 26459412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 26703149 - 26703196
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  26703149 tattggcttgggatctgggagtgtgctccttctcgaggtctcaggttc 26703196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 3174955 - 3175001
Alignment:
Q  182 gacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||    
T  3174955 gacttgggatctgggagtgtgctccatctcgaggtctcaggttcgat 3175001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 7801203 - 7801253
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcga 227  Q
    |||||||||||||| ||||||||||||||||| || | |||||||||||||    
T  7801203 gtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 9183231 - 9183193
Alignment:
Q  190 atctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  9183231 atctgggagtgtgctcctcctcaaagtctcaggttcgat 9183193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 23552142 - 23552192
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||| |||||||||||||||||||| | |||||| |||||||    
T  23552142 tattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgat 23552192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 17041063 - 17041014
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| |||||||||||| ||||||||||||||| | ||||||||||||||    
T  17041063 attggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgat 17041014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 21854571 - 21854616
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcagg 222  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||    
T  21854571 gtattggctagggatctgggagtgtgctcctcctcaaagtctcagg 21854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 41519317 - 41519268
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcg 226  Q
    ||||||||||||||| | ||||||||||||||||| | ||||||||||||    
T  41519317 gtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcg 41519268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 43215190 - 43215258
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| ||||| ||||||| || ||||||||||||||||| | ||||||||||||||    
T  43215190 cttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgat 43215258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 21410753 - 21410706
Alignment:
Q  187 gggatctgggagtgtgctcctcctcgaagtctcaggttcgatgatgtc 234  Q
    |||||||| |||||||||||||||||||||||||  |||||| |||||    
T  21410753 gggatctgagagtgtgctcctcctcgaagtctcaaattcgattatgtc 21410706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 25021388 - 25021345
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctca 220  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||    
T  25021388 gtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 25655281 - 25655230
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||| ||||||| |||||||| | || |||||||||||    
T  25655281 gtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgat 25655230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 37085602 - 37085551
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||| ||||||||||||| ||||||| || |||||||||||    
T  37085602 gtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgat 37085551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 43590930 - 43590981
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||  ||||||||||||||||||| | ||||||||||||||    
T  43590930 gtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgat 43590981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 27776214 - 27776243
Alignment:
Q  196 gagtgtgctcctcctcgaagtctcaggttc 225  Q
    ||||||||||||||||||||||||||||||    
T  27776214 gagtgtgctcctcctcgaagtctcaggttc 27776243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 29916859 - 29916810
Alignment:
Q  179 attgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||||  |||||||||||||||| | ||||||||||||||    
T  29916859 attgacgtgggatctaagagtgtgctcctcctcaaggtctcaggttcgat 29916810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 5934151 - 5934195
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||||| || || ||| |||||||    
T  5934151 cttgggatctgggagtgtgctcctccttgaggtttcatgttcgat 5934195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 7499994 - 7499926
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||| || ||| ||||| ||||||| ||| |||| |||||||| |||| ||||||||||||||    
T  7499994 cttgggttagcctagtgatattggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgat 7499926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 9608675 - 9608631
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||| ||||||||| |  |||||||||||||    
T  9608675 cttgggatctgggagtgtcctcctcctcaagatctcaggttcgat 9608631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 9836247 - 9836203
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||| ||||||||| |  |||||||||||||    
T  9836247 cttgggatctgggagtgtcctcctcctcaagatctcaggttcgat 9836203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 18056845 - 18056777
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||| ||| ||||||||||||   | ||||||||||||||||  | ||||||||||||||    
T  18056845 cttgggttagtctggtggtattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggttcgat 18056777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 29785347 - 29785303
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||| ||||||||||||||| | |||||| |||||||    
T  29785347 cttgggatctggaagtgtgctcctcctcaaggtctcatgttcgat 29785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 42814887 - 42814934
Alignment:
Q  180 ttgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||||    
T  42814887 ttgacttgggatcttggagtttgctcct-cttgaagtctcaggttcgat 42814934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 49050537 - 49050493
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||| |||||| |||||||| || ||||||||||||||    
T  49050537 cttgggatctgcgagtgtactcctccttgaggtctcaggttcgat 49050493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 33549110 - 33549178
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||| |||| ||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||    
T  33549110 cttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgat 33549178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 24641243 - 24641192
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||||||||||||||||||||||||| || | |||||||||    
T  24641243 gtattgacttgggatctgggagtgtgctcctcctcgaggtttaaggttcgat 24641192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 34786507 - 34786456
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  34786507 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgat 34786456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 30127396 - 30127474
Alignment:
Q  151 atttagcccgcttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||| ||| |||||||| |||| ||| ||||| |||||| |||||||||||||||||| |||| ||||||||||||||    
T  30127396 atttaacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgat 30127474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 11423568 - 11423640
Alignment:
Q  157 cccgcttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||| | |||| ||| |||||||||||||| ||||||| |||| |||||||| ||||||||||||||    
T  11423568 cccgcttgggctggtctggtggtattgacttgggatttgggagtatgcttctcctcgaggtctcaggttcgat 11423640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 12234560 - 12234509
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| |||||||||||||||  ||||| ||||||||||||||    
T  12234560 gtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgat 12234509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 13227199 - 13227160
Alignment:
Q  189 gatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  13227199 gatctgggagtgtgctcctcctcgaagtctcaagttcgat 13227160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 31623044 - 31622997
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  31623044 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 31622997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 9433643 - 9433607
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcga 213  Q
    ||||||||||||||||||||||||||||| |||||||    
T  9433643 gtattgacttgggatctgggagtgtgctcttcctcga 9433607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 20213071 - 20213115
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||    
T  20213071 cttgggacctgggagtgtgctcctcctcaatgtctcaggttcgat 20213115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 22107094 - 22107138
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||    
T  22107094 cttgggacctgggagtgtgctcctcctcaatgtctcaggttcgat 22107138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 23910158 - 23910114
Alignment:
Q  183 acttgggatctgggagtgtgctcctcctcgaagtctcaggttcga 227  Q
    |||||||| |||||||||||||||||||| | |||||||||||||    
T  23910158 acttgggacctgggagtgtgctcctcctcaaggtctcaggttcga 23910114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 6385885 - 6385936
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| |||||| ||||||||||||  | ||||||||||||||    
T  6385885 gtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgat 6385936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 6776660 - 6776617
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctca 220  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  6776660 gtattggcttgggatctgggggtgtgctcctcctcgatgtctca 6776617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 10338227 - 10338176
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| || ||||||||||||||||| | ||||||||||||||    
T  10338227 gtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgat 10338176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 3172820 - 3172770
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||| |||||||| |||||||| |||| ||||||| ||||||    
T  3172820 tattgacttgggacctgggagtatgctcctcatcgaggtctcagattcgat 3172770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 12633033 - 12633083
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||| |||||||||||||||| ||||  ||||| |||||||    
T  12633033 tattgacttgggatttgggagtgtgctcctcttcgagatctcatgttcgat 12633083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 13661529 - 13661590
Alignment:
Q  163 tgggttagtcttgtgtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggtt 224  Q
    |||||| |||| |||||||| ||||  |  ||||||||||||||||||||| ||||||||||    
T  13661529 tgggttggtctagtgtattggcttgacacttgggagtgtgctcctcctcgaggtctcaggtt 13661590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 968385 - 968436
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||||||||||    
T  968385 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgat 968436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 16852363 - 16852414
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||||||||||    
T  16852363 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgat 16852414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 23361702 - 23361654
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  23361702 gtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttc 23361654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 29858102 - 29858051
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| | |||||||||||||||||||| ||||||||||||||    
T  29858102 gtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgat 29858051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 34628666 - 34628716
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||| ||||||||||||||||||| | |||||| ||||||||||||||||    
T  34628666 tattggcttgggatctgggagtgtgtttctcctcaaagtctcaggttcgat 34628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 20994511 - 20994459
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcct-cctcgaagtctcaggttcgat 228  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||| |||||    
T  20994511 gtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgat 20994459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 30483937 - 30483889
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||| |||||||| |||||||||||||||||||  ||||||||||||    
T  30483937 gtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttc 30483889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 35641947 - 35641903
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||    
T  35641947 cttgagatttgggagtgtgctcctcctcgatgtctcaggttcgat 35641903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 3624603 - 3624654
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| ||||||||||||||||| || | ||||||||||||||    
T  3624603 gtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgat 3624654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 7140732 - 7140783
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||||||||| ||||||||||||||||  |||||| ||||||    
T  7140732 gtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgat 7140783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 11492126 - 11492075
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||| ||||||||||||||||||| ||||| |||| |||||||||    
T  11492126 gtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgat 11492075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 19703540 - 19703489
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||| ||| |||||||||||||||| | ||||||||||||||    
T  19703540 gtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgat 19703489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 35690117 - 35690066
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| ||||||||||||| || ||||||||||| | ||||||||||||||    
T  35690117 gtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgat 35690066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 38661902 - 38661953
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||| || ||| ||||||||||||| ||||||||||| |||||||||||    
T  38661902 gtattgatttaggacctgggagtgtgcttctcctcgaagtttcaggttcgat 38661953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 31087310 - 31087260
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||| |||||||||||||||| | | ||||||||| ||||||||||||||    
T  31087310 tattggcttgggatctgggagtatccccctcctcgaggtctcaggttcgat 31087260  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 2203515 - 2203560
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcagg 222  Q
    |||||| ||||||| |||||||||||||||||||| | ||||||||    
T  2203515 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcagg 2203560  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 4830518 - 4830558
Alignment:
Q  185 ttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||||||| ||||||| |||||||||| |||||||||||    
T  4830518 ttgggatctgagagtgtgttcctcctcgaggtctcaggttc 4830558  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 6536543 - 6536591
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||| ||||||| || ||||||||||||||||| | |||||||||||    
T  6536543 gtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttc 6536591  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 6569823 - 6569791
Alignment:
Q  178 tattgacttgggatctgggagtgtgctcctcct 210  Q
    ||||| |||||||||||||||||||||||||||    
T  6569823 tattggcttgggatctgggagtgtgctcctcct 6569791  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 11819806 - 11819850
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||  ||||||||||||||||||| | ||||||||||||||    
T  11819806 cttgggacttgggagtgtgctcctcctcaaggtctcaggttcgat 11819850  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 11928769 - 11928733
Alignment:
Q  192 ctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  11928769 ctggaagtgtgctcctcctcgaggtctcaggttcgat 11928733  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 22193414 - 22193366
Alignment:
Q  180 ttgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||  |||||||||||||||||||| | |||| |||||||||    
T  22193414 ttgacttggggcctgggagtgtgctcctcctcaaggtcttaggttcgat 22193366  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 27750760 - 27750804
Alignment:
Q  184 cttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||  ||||||||||||||||||| | ||||||||||||||    
T  27750760 cttgggacttgggagtgtgctcctcctcaaggtctcaggttcgat 27750804  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 35583625 - 35583673
Alignment:
Q  180 ttgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||  ||||||| ||||||||||||| |||||||| |||||    
T  35583625 ttgacttgggacttgggagtttgctcctcctcgaggtctcaggatcgat 35583673  T

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Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 13099 - 13048
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||| ||||||||||||||||||||||| | ||||||||||||||    
T  13099 gtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgat 13048  T

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Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 42573 - 42522
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||| |||||||||| |||||||||||  |||||||||||||||    
T  42573 gtattgacttggaatctgggagtatgctcctcctcagagtctcaggttcgat 42522  T

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Target: scaffold0291 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 2512 - 2472
Alignment:
Q  188 ggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  2512 ggatctgggagtgtgctcctcctcaaggtctcaggttcgat 2472  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 24076 - 24127
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    ||||||||||||||  | |||||||||||||| ||||||| |||||||||||    
T  24076 gtattgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgat 24127  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 6972 - 6921
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||   |||||||||||||||||| ||||||||||||||||    
T  6972 gtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttcgat 6921  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 92970 - 93021
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||| ||||||||||||| ||||||| || |||| |||||||||    
T  92970 gtattgacttggaatctgggagtgtgatcctccttgaggtctgaggttcgat 93021  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 19900 - 19849
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||| |||||||||||||||| |||||||||| || |||||| |||||||    
T  19900 gtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgat 19849  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 41686 - 41638
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||| |||| |||||| |||| ||||||||||||| |||||||||||    
T  41686 gtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttc 41638  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 15041 - 14974
Alignment:
Q  161 cttgggttagtcttgtg-tattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttcgat 228  Q
    |||||||||||||  || ||||| ||| ||| |||||||| ||||||||||| ||||||||||||||||    
T  15041 cttgggttagtctgatgctattggcttaggaactgggagtatgctcctcctc-aagtctcaggttcgat 14974  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 157040 - 157004
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcga 213  Q
    |||||| |||| |||||||||||||||||||||||||    
T  157040 gtattggcttgagatctgggagtgtgctcctcctcga 157004  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 95024 - 94976
Alignment:
Q  177 gtattgacttgggatctgggagtgtgctcctcctcgaagtctcaggttc 225  Q
    |||||| ||||| | |||||||||||||||||||| | |||||||||||    
T  95024 gtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttc 94976  T

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