View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_324 (Length: 247)
Name: NF9839A_low_324
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_324 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 24845114 - 24845330
Alignment:
| Q |
25 |
gaatttagaagaaagataatcaagttaaagaacttgtccaaggtcaagattgtaagaaccaagttggtttgaagaacaataatccttatatatttttatg |
124 |
Q |
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| T |
24845114 |
gaatttagaagaaagataatcaagttaaagaacttgtccaaggtcaagattgtaagaaccaagttggtttgaagaacaataatccttatatatttttatg |
24845213 |
T |
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| Q |
125 |
aaaacaaagtaaacgagaacaattttcttgttccaacatatgcttaagtgtgcagataaaaaggcccaagttgtgcctcaggtgaaaaagaatatcaagc |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
24845214 |
aaaacaaagtaaacgagaacaattttcttgttccaacatatgcttaagtgtgcagataaaaaggcccaagttgtgccttaggtgaaaaagaatatcaaga |
24845313 |
T |
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| Q |
225 |
ccaaattacaagtcgtt |
241 |
Q |
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| T |
24845314 |
ccaaattacaagtcgtt |
24845330 |
T |
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