View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_33 (Length: 429)

Name: NF9839A_low_33
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_33
NF9839A_low_33
[»] chr8 (61 HSPs)
chr8 (217-429)||(34694502-34694712)
chr8 (6-206)||(34694834-34695033)
chr8 (230-345)||(13749133-13749248)
chr8 (217-355)||(33746947-33747084)
chr8 (217-355)||(4718710-4718847)
chr8 (217-355)||(20305973-20306110)
chr8 (217-355)||(21092606-21092743)
chr8 (217-354)||(18128578-18128714)
chr8 (88-197)||(40517319-40517430)
chr8 (217-355)||(2618251-2618388)
chr8 (217-355)||(34237654-34237791)
chr8 (217-267)||(3403588-3403638)
chr8 (85-194)||(36514460-36514569)
chr8 (227-283)||(34639277-34639333)
chr8 (217-355)||(3734622-3734759)
chr8 (217-355)||(8765525-8765662)
chr8 (217-355)||(39349321-39349458)
chr8 (217-354)||(21603295-21603431)
chr8 (217-353)||(15259407-15259542)
chr8 (217-353)||(28193539-28193674)
chr8 (220-355)||(42328072-42328206)
chr8 (217-355)||(14633019-14633156)
chr8 (131-194)||(27854710-27854773)
chr8 (217-283)||(41070826-41070892)
chr8 (131-188)||(33100412-33100469)
chr8 (131-197)||(37133804-37133872)
chr8 (110-179)||(39856119-39856188)
chr8 (88-197)||(7331248-7331359)
chr8 (220-355)||(19471677-19471812)
chr8 (220-355)||(19542601-19542736)
chr8 (220-355)||(19589960-19590095)
chr8 (131-179)||(45405613-45405661)
chr8 (217-355)||(32879344-32879481)
chr8 (217-279)||(3794856-3794918)
chr8 (133-191)||(7679162-7679220)
chr8 (217-267)||(20505618-20505668)
chr8 (217-258)||(28964098-28964140)
chr8 (217-265)||(6953094-6953143)
chr8 (217-354)||(13579903-13580039)
chr8 (295-355)||(2639410-2639470)
chr8 (140-179)||(888208-888247)
chr8 (308-355)||(5740382-5740429)
chr8 (129-197)||(12734951-12735021)
chr8 (88-179)||(13106561-13106652)
chr8 (217-284)||(22200629-22200696)
chr8 (217-355)||(34610686-34610823)
chr8 (217-259)||(8387538-8387580)
chr8 (131-194)||(10839424-10839489)
chr8 (217-354)||(42643118-42643254)
chr8 (106-179)||(7472944-7473016)
chr8 (228-269)||(21239425-21239466)
chr8 (217-265)||(27746422-27746471)
chr8 (106-179)||(29025341-29025414)
chr8 (119-203)||(144186-144270)
chr8 (119-196)||(6015962-6016041)
chr8 (131-179)||(11253484-11253532)
chr8 (295-355)||(16990725-16990785)
chr8 (129-181)||(28756615-28756667)
chr8 (88-194)||(32020360-32020472)
chr8 (131-179)||(32501138-32501186)
chr8 (303-355)||(33534566-33534618)
[»] chr2 (62 HSPs)
chr2 (217-355)||(8192351-8192487)
chr2 (217-354)||(19174824-19174959)
chr2 (217-355)||(15038020-15038157)
chr2 (217-355)||(33827572-33827709)
chr2 (217-355)||(44946052-44946189)
chr2 (295-355)||(14486963-14487023)
chr2 (77-202)||(31296594-31296721)
chr2 (99-167)||(32344590-32344658)
chr2 (217-355)||(35171861-35171998)
chr2 (229-354)||(11941210-11941334)
chr2 (217-355)||(28194137-28194269)
chr2 (88-194)||(42430714-42430822)
chr2 (217-355)||(2140485-2140619)
chr2 (228-276)||(4618762-4618810)
chr2 (108-197)||(28494921-28495012)
chr2 (129-197)||(33583162-33583230)
chr2 (217-355)||(41314053-41314189)
chr2 (88-167)||(7667204-7667283)
chr2 (297-352)||(10325035-10325090)
chr2 (231-353)||(12543219-12543339)
chr2 (217-354)||(17324827-17324961)
chr2 (217-328)||(18708538-18708648)
chr2 (217-260)||(19525489-19525532)
chr2 (295-354)||(31778169-31778228)
chr2 (131-202)||(12070904-12070977)
chr2 (217-266)||(3405239-3405288)
chr2 (78-179)||(8427634-8427735)
chr2 (217-265)||(10582077-10582126)
chr2 (77-194)||(10833535-10833652)
chr2 (131-197)||(27490672-27490740)
chr2 (295-355)||(13747499-13747559)
chr2 (131-179)||(17999619-17999667)
chr2 (131-179)||(37737913-37737961)
chr2 (131-179)||(40700277-40700325)
chr2 (217-355)||(43374329-43374461)
chr2 (88-179)||(7663966-7664056)
chr2 (229-355)||(28668946-28669071)
chr2 (295-354)||(41329980-41330039)
chr2 (301-355)||(1845048-1845102)
chr2 (129-179)||(13711306-13711356)
chr2 (217-258)||(32845152-32845194)
chr2 (85-185)||(3412450-3412551)
chr2 (295-344)||(4852667-4852716)
chr2 (133-190)||(16049229-16049286)
chr2 (217-265)||(36390655-36390704)
chr2 (88-194)||(44050080-44050187)
chr2 (217-265)||(45271445-45271494)
chr2 (129-168)||(1836105-1836145)
chr2 (131-175)||(2076654-2076698)
chr2 (131-179)||(3771453-3771501)
chr2 (295-355)||(18692098-18692158)
chr2 (149-196)||(19529594-19529639)
chr2 (232-268)||(30943172-30943208)
chr2 (295-355)||(34516413-34516473)
chr2 (130-173)||(35792581-35792625)
chr2 (77-194)||(39147830-39147949)
chr2 (227-259)||(40591254-40591286)
chr2 (131-179)||(41195665-41195713)
chr2 (131-179)||(42532680-42532728)
chr2 (136-188)||(43690948-43691000)
chr2 (217-276)||(44976231-44976290)
chr2 (129-194)||(44977439-44977506)
[»] chr5 (52 HSPs)
chr5 (217-354)||(19145412-19145547)
chr5 (217-355)||(32059439-32059576)
chr5 (217-354)||(36895486-36895622)
chr5 (217-355)||(4603838-4603975)
chr5 (217-355)||(27498730-27498867)
chr5 (229-354)||(930486-930608)
chr5 (217-354)||(24158166-24158302)
chr5 (220-354)||(11926501-11926635)
chr5 (220-355)||(8484660-8484794)
chr5 (217-355)||(38684269-38684405)
chr5 (217-355)||(18207268-18207405)
chr5 (217-355)||(30485889-30486026)
chr5 (227-355)||(19456210-19456336)
chr5 (217-354)||(34310203-34310339)
chr5 (217-355)||(33709502-33709637)
chr5 (88-197)||(19952061-19952172)
chr5 (217-355)||(15641105-15641241)
chr5 (105-179)||(33958175-33958249)
chr5 (129-194)||(6596397-6596462)
chr5 (130-194)||(20270635-20270699)
chr5 (129-194)||(21943635-21943702)
chr5 (295-355)||(22392826-22392886)
chr5 (131-179)||(41699535-41699583)
chr5 (217-355)||(7085625-7085762)
chr5 (217-355)||(10869564-10869701)
chr5 (88-168)||(27546158-27546238)
chr5 (295-355)||(37495192-37495252)
chr5 (295-355)||(41351103-41351163)
chr5 (131-202)||(19844252-19844323)
chr5 (129-179)||(20770212-20770263)
chr5 (302-353)||(22648167-22648218)
chr5 (295-354)||(22693073-22693132)
chr5 (217-355)||(31287945-31288082)
chr5 (308-354)||(10837447-10837493)
chr5 (149-179)||(10865399-10865429)
chr5 (217-259)||(15931120-15931162)
chr5 (133-175)||(17097745-17097787)
chr5 (106-192)||(21353212-21353298)
chr5 (129-196)||(28597123-28597192)
chr5 (108-157)||(13375579-13375628)
chr5 (217-265)||(25586993-25587042)
chr5 (133-194)||(35075521-35075582)
chr5 (88-140)||(1293017-1293069)
chr5 (303-355)||(10631288-10631340)
chr5 (295-355)||(21236361-21236421)
chr5 (232-327)||(23270549-23270643)
chr5 (131-179)||(27487968-27488016)
chr5 (295-355)||(31206381-31206441)
chr5 (129-181)||(33599042-33599093)
chr5 (217-276)||(37495108-37495167)
chr5 (295-355)||(38630978-38631038)
chr5 (131-179)||(41321336-41321384)
[»] chr7 (64 HSPs)
chr7 (217-354)||(28647034-28647170)
chr7 (229-355)||(21574101-21574226)
chr7 (217-355)||(23330738-23330875)
chr7 (217-355)||(654704-654840)
chr7 (217-355)||(21835216-21835353)
chr7 (217-355)||(22119953-22120090)
chr7 (217-355)||(40542909-40543046)
chr7 (217-354)||(18044172-18044308)
chr7 (217-355)||(2344364-2344501)
chr7 (217-355)||(2751336-2751473)
chr7 (217-355)||(7175861-7175998)
chr7 (217-355)||(22703551-22703688)
chr7 (217-354)||(7275342-7275478)
chr7 (217-355)||(16374059-16374196)
chr7 (220-354)||(22696388-22696522)
chr7 (217-267)||(8435781-8435831)
chr7 (217-354)||(17196950-17197086)
chr7 (95-194)||(18889933-18890034)
chr7 (227-355)||(23092171-23092298)
chr7 (88-181)||(35600751-35600844)
chr7 (229-353)||(35476418-35476541)
chr7 (217-355)||(11997914-11998051)
chr7 (131-194)||(22925226-22925289)
chr7 (131-194)||(30064505-30064568)
chr7 (131-194)||(44649270-44649333)
chr7 (88-194)||(25887927-25888032)
chr7 (298-355)||(17279676-17279733)
chr7 (295-355)||(27312294-27312354)
chr7 (295-355)||(31197732-31197792)
chr7 (131-179)||(36352526-36352574)
chr7 (217-355)||(21217832-21217969)
chr7 (217-355)||(29861735-29861872)
chr7 (229-344)||(47541461-47541574)
chr7 (217-354)||(27009424-27009561)
chr7 (129-179)||(33776441-33776491)
chr7 (129-193)||(37845217-37845282)
chr7 (217-265)||(42814929-42814978)
chr7 (295-343)||(674447-674495)
chr7 (131-179)||(31398206-31398254)
chr7 (131-179)||(41430093-41430141)
chr7 (295-354)||(31712902-31712961)
chr7 (217-264)||(36173100-36173147)
chr7 (88-179)||(41018745-41018836)
chr7 (131-194)||(41863571-41863634)
chr7 (232-266)||(1469192-1469226)
chr7 (131-194)||(4292492-4292557)
chr7 (129-179)||(18883197-18883247)
chr7 (303-353)||(32849741-32849791)
chr7 (106-193)||(36533793-36533882)
chr7 (136-194)||(38259128-38259186)
chr7 (149-194)||(1284480-1284525)
chr7 (217-265)||(2103120-2103169)
chr7 (217-265)||(10091253-10091302)
chr7 (130-179)||(19880053-19880102)
chr7 (129-194)||(36207102-36207167)
chr7 (235-354)||(3851840-3851958)
chr7 (131-179)||(9363469-9363517)
chr7 (131-179)||(12007127-12007175)
chr7 (133-194)||(30667721-30667784)
chr7 (131-179)||(31445399-31445447)
chr7 (136-197)||(38939926-38939989)
chr7 (131-179)||(42584884-42584932)
chr7 (295-355)||(42913512-42913572)
chr7 (129-173)||(43171161-43171205)
[»] chr1 (62 HSPs)
chr1 (217-341)||(16899564-16899687)
chr1 (217-354)||(1486479-1486617)
chr1 (217-354)||(9926146-9926282)
chr1 (217-354)||(25236990-25237125)
chr1 (217-355)||(4621236-4621373)
chr1 (220-355)||(30677240-30677374)
chr1 (88-167)||(43367800-43367879)
chr1 (217-355)||(46607871-46608008)
chr1 (217-354)||(24122084-24122220)
chr1 (217-355)||(32729606-32729742)
chr1 (220-283)||(16539672-16539735)
chr1 (99-194)||(6949890-6949987)
chr1 (217-354)||(24674454-24674590)
chr1 (295-355)||(27159223-27159283)
chr1 (217-355)||(7766726-7766863)
chr1 (217-355)||(15059401-15059538)
chr1 (227-270)||(19034469-19034512)
chr1 (217-355)||(23734177-23734315)
chr1 (217-355)||(23741369-23741507)
chr1 (217-354)||(9500355-9500491)
chr1 (130-192)||(35196251-35196313)
chr1 (295-353)||(37351454-37351512)
chr1 (217-353)||(17935830-17935965)
chr1 (88-194)||(21433299-21433407)
chr1 (217-345)||(1095013-1095139)
chr1 (88-144)||(29706602-29706658)
chr1 (272-354)||(35138105-35138185)
chr1 (88-179)||(43560286-43560377)
chr1 (295-354)||(52135264-52135323)
chr1 (231-281)||(1138654-1138704)
chr1 (136-194)||(6257915-6257973)
chr1 (129-179)||(33070684-33070734)
chr1 (217-265)||(7578470-7578519)
chr1 (88-173)||(44517860-44517945)
chr1 (129-197)||(46758431-46758498)
chr1 (217-327)||(168262-168371)
chr1 (88-195)||(32923312-32923419)
chr1 (217-259)||(45859136-45859179)
chr1 (131-181)||(30973632-30973682)
chr1 (295-353)||(34778477-34778535)
chr1 (235-276)||(809301-809342)
chr1 (108-194)||(7275586-7275674)
chr1 (217-265)||(7946905-7946954)
chr1 (217-265)||(8077708-8077757)
chr1 (229-270)||(20907344-20907385)
chr1 (217-265)||(23232352-23232401)
chr1 (229-270)||(24217051-24217092)
chr1 (131-197)||(27533426-27533494)
chr1 (217-265)||(36155975-36156024)
chr1 (217-265)||(37351548-37351597)
chr1 (129-194)||(37516589-37516654)
chr1 (88-194)||(39712443-39712551)
chr1 (217-261)||(46113493-46113538)
chr1 (130-179)||(50242392-50242441)
chr1 (230-270)||(6416043-6416083)
chr1 (217-276)||(18646914-18646973)
chr1 (131-196)||(25672404-25672471)
chr1 (146-194)||(29246438-29246486)
chr1 (131-179)||(29877379-29877427)
chr1 (131-179)||(33076201-33076249)
chr1 (151-195)||(37454020-37454064)
chr1 (99-167)||(46100958-46101026)
[»] chr6 (38 HSPs)
chr6 (229-352)||(10377788-10377911)
chr6 (217-355)||(1344996-1345133)
chr6 (217-355)||(34147407-34147544)
chr6 (217-355)||(34160023-34160160)
chr6 (227-354)||(17225738-17225863)
chr6 (217-355)||(15360097-15360234)
chr6 (217-355)||(3222635-3222771)
chr6 (217-354)||(654146-654282)
chr6 (217-354)||(11448932-11449068)
chr6 (88-194)||(8056780-8056888)
chr6 (217-352)||(17149458-17149592)
chr6 (217-354)||(5360071-5360207)
chr6 (131-193)||(277056-277120)
chr6 (217-354)||(9208313-9208449)
chr6 (131-179)||(3853249-3853297)
chr6 (217-328)||(12390486-12390596)
chr6 (88-179)||(25127729-25127820)
chr6 (88-194)||(3552054-3552160)
chr6 (217-354)||(9690638-9690774)
chr6 (220-354)||(33499539-33499672)
chr6 (217-345)||(3907602-3907727)
chr6 (217-353)||(9239036-9239171)
chr6 (130-179)||(30956153-30956202)
chr6 (218-265)||(11840963-11841011)
chr6 (217-355)||(21148510-21148646)
chr6 (131-175)||(27612960-27613004)
chr6 (88-179)||(10826584-10826675)
chr6 (229-355)||(21982320-21982444)
chr6 (131-181)||(4820446-4820496)
chr6 (129-179)||(10335632-10335682)
chr6 (131-197)||(16336890-16336956)
chr6 (131-194)||(26595413-26595478)
chr6 (130-167)||(30945907-30945944)
chr6 (230-337)||(6383891-6383998)
chr6 (287-355)||(9844068-9844136)
chr6 (231-279)||(17420941-17420989)
chr6 (88-197)||(28632528-28632639)
chr6 (131-179)||(31869149-31869197)
[»] scaffold0160 (1 HSPs)
scaffold0160 (217-354)||(29143-29278)
[»] chr3 (73 HSPs)
chr3 (220-345)||(4252405-4252529)
chr3 (217-355)||(15566499-15566635)
chr3 (217-355)||(48977449-48977586)
chr3 (220-355)||(10083818-10083952)
chr3 (220-355)||(10190741-10190875)
chr3 (217-354)||(49258262-49258398)
chr3 (106-195)||(35299791-35299880)
chr3 (217-355)||(8456149-8456286)
chr3 (217-355)||(30807152-30807289)
chr3 (217-355)||(40133448-40133585)
chr3 (229-345)||(26158891-26158999)
chr3 (217-354)||(35492972-35493108)
chr3 (96-162)||(46965825-46965891)
chr3 (130-194)||(32587738-32587802)
chr3 (217-355)||(45272415-45272552)
chr3 (88-193)||(46965999-46966106)
chr3 (217-355)||(53424176-53424312)
chr3 (99-178)||(27511807-27511885)
chr3 (217-355)||(46576409-46576546)
chr3 (295-354)||(50731237-50731296)
chr3 (295-354)||(50781558-50781617)
chr3 (217-354)||(52821636-52821771)
chr3 (217-354)||(18176887-18177023)
chr3 (217-354)||(21363004-21363140)
chr3 (77-179)||(23770633-23770735)
chr3 (219-318)||(1242036-1242134)
chr3 (77-162)||(46965897-46965982)
chr3 (228-276)||(1178244-1178292)
chr3 (79-179)||(12762579-12762679)
chr3 (217-355)||(8097278-8097415)
chr3 (217-355)||(25289714-25289850)
chr3 (217-355)||(26174174-26174311)
chr3 (131-194)||(44413864-44413927)
chr3 (217-355)||(45529754-45529890)
chr3 (217-355)||(53233910-53234046)
chr3 (217-354)||(39041852-39041988)
chr3 (217-265)||(26108353-26108402)
chr3 (131-196)||(44962127-44962192)
chr3 (79-188)||(45693817-45693926)
chr3 (226-270)||(7203211-7203255)
chr3 (88-197)||(9311102-9311213)
chr3 (131-179)||(16479714-16479762)
chr3 (131-179)||(34592146-34592194)
chr3 (129-193)||(46574324-46574388)
chr3 (218-265)||(53288799-53288847)
chr3 (295-355)||(53848433-53848493)
chr3 (295-354)||(4048088-4048147)
chr3 (295-354)||(24407399-24407458)
chr3 (217-355)||(30257685-30257822)
chr3 (88-179)||(37035424-37035515)
chr3 (107-177)||(3518525-3518595)
chr3 (299-341)||(30908495-30908537)
chr3 (217-354)||(34492575-34492711)
chr3 (106-188)||(54007534-54007616)
chr3 (295-345)||(55371303-55371353)
chr3 (302-355)||(32094756-32094809)
chr3 (77-134)||(33256435-33256492)
chr3 (217-265)||(40940886-40940935)
chr3 (131-197)||(50876304-50876372)
chr3 (295-328)||(51532927-51532960)
chr3 (217-264)||(2511385-2511433)
chr3 (131-179)||(5114159-5114207)
chr3 (297-345)||(6127593-6127640)
chr3 (131-195)||(11630692-11630756)
chr3 (295-355)||(24165714-24165774)
chr3 (99-179)||(29030716-29030796)
chr3 (295-335)||(33793590-33793630)
chr3 (88-197)||(34627780-34627891)
chr3 (131-179)||(41309198-41309246)
chr3 (131-179)||(45186493-45186541)
chr3 (131-179)||(48287753-48287801)
chr3 (149-194)||(50314689-50314736)
chr3 (221-269)||(51390923-51390971)
[»] chr4 (60 HSPs)
chr4 (217-354)||(20566411-20566547)
chr4 (217-355)||(34844757-34844894)
chr4 (217-355)||(40058851-40058988)
chr4 (217-354)||(34723860-34723996)
chr4 (217-353)||(52983680-52983815)
chr4 (217-281)||(22630258-22630322)
chr4 (217-355)||(5609201-5609338)
chr4 (217-355)||(27528794-27528931)
chr4 (88-193)||(34995386-34995493)
chr4 (130-194)||(52895292-52895359)
chr4 (217-354)||(25852275-25852412)
chr4 (217-355)||(45787703-45787840)
chr4 (108-181)||(10474031-10474104)
chr4 (129-202)||(47111001-47111074)
chr4 (131-179)||(193614-193662)
chr4 (77-173)||(19174662-19174758)
chr4 (313-353)||(41621583-41621623)
chr4 (77-181)||(47288162-47288266)
chr4 (131-179)||(50608566-50608614)
chr4 (295-354)||(23639762-23639821)
chr4 (295-354)||(23645420-23645479)
chr4 (221-355)||(32986262-32986395)
chr4 (221-355)||(54127341-54127474)
chr4 (131-197)||(2575732-2575798)
chr4 (221-354)||(33696279-33696411)
chr4 (131-181)||(38376432-38376482)
chr4 (308-354)||(39343611-39343657)
chr4 (131-181)||(39478516-39478566)
chr4 (129-179)||(39654905-39654955)
chr4 (229-354)||(40307614-40307736)
chr4 (116-202)||(40590657-40590743)
chr4 (149-194)||(24045309-24045354)
chr4 (235-353)||(12710258-12710373)
chr4 (131-179)||(37997335-37997383)
chr4 (235-283)||(39288938-39288985)
chr4 (131-179)||(55609106-55609154)
chr4 (295-354)||(7093509-7093568)
chr4 (88-143)||(24990232-24990287)
chr4 (129-179)||(28458316-28458367)
chr4 (217-355)||(32990496-32990633)
chr4 (88-143)||(35936083-35936138)
chr4 (229-355)||(46714466-46714591)
chr4 (88-179)||(50831654-50831745)
chr4 (228-270)||(10125892-10125934)
chr4 (301-355)||(22488027-22488081)
chr4 (95-194)||(23667943-23668044)
chr4 (129-179)||(24509327-24509377)
chr4 (227-269)||(41621680-41621722)
chr4 (131-188)||(11672065-11672122)
chr4 (217-265)||(22625157-22625206)
chr4 (119-196)||(23662246-23662326)
chr4 (227-276)||(28791186-28791235)
chr4 (217-265)||(33992687-33992736)
chr4 (217-265)||(35674828-35674877)
chr4 (102-179)||(35874815-35874892)
chr4 (217-261)||(49287919-49287964)
chr4 (295-355)||(19660531-19660591)
chr4 (301-353)||(21621680-21621732)
chr4 (137-193)||(31838713-31838768)
chr4 (131-179)||(51255828-51255876)
[»] scaffold0576 (1 HSPs)
scaffold0576 (217-355)||(5081-5218)
[»] scaffold0070 (1 HSPs)
scaffold0070 (217-355)||(40386-40522)
[»] scaffold0019 (1 HSPs)
scaffold0019 (217-355)||(161870-162007)
[»] scaffold0217 (1 HSPs)
scaffold0217 (217-354)||(7309-7445)
[»] scaffold0049 (1 HSPs)
scaffold0049 (295-354)||(66892-66951)
[»] scaffold0026 (2 HSPs)
scaffold0026 (217-354)||(97366-97502)
scaffold0026 (295-339)||(5969-6013)
[»] scaffold1175 (1 HSPs)
scaffold1175 (295-354)||(2426-2485)
[»] scaffold0366 (1 HSPs)
scaffold0366 (217-355)||(9299-9435)
[»] scaffold0102 (1 HSPs)
scaffold0102 (217-355)||(39153-39290)
[»] scaffold0623 (1 HSPs)
scaffold0623 (217-354)||(1057-1192)
[»] scaffold0020 (1 HSPs)
scaffold0020 (217-258)||(123146-123187)
[»] scaffold0328 (1 HSPs)
scaffold0328 (217-354)||(13047-13180)
[»] scaffold0051 (1 HSPs)
scaffold0051 (217-355)||(52870-53007)
[»] scaffold0013 (1 HSPs)
scaffold0013 (130-197)||(90021-90088)
[»] scaffold0257 (1 HSPs)
scaffold0257 (134-172)||(24060-24098)
[»] scaffold0007 (1 HSPs)
scaffold0007 (131-196)||(246723-246788)
[»] scaffold0519 (1 HSPs)
scaffold0519 (131-179)||(11863-11911)


Alignment Details
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 217 - 429
Target Start/End: Complemental strand, 34694712 - 34694502
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34694712 ttcgattccatctggtgccaatttcggtgggcaaattcatacaaagctttgctccggcttagaacggaatccccctctagtggacggtgggattggtccc 34694613  T
Q  317 ctcagattagtctgtccttggatcggataacgagttttcnnnnnnnttaccatttctctaaatnnnnnnnttgacactgttctttaaaatgctttgttgg 416  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||||||||||        ||||||||||||||||||||||||||||||    
T  34694612 ctcagattagtctgtccttggatcggataacgagttttcaaaaaaaataccatttctctaaa--aaaaaattgacactgttctttaaaatgctttgttgg 34694515  T
Q  417 ttagcctctttga 429  Q
    |||||||||||||    
T  34694514 ttagcctctttga 34694502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 6 - 206
Target Start/End: Complemental strand, 34695033 - 34694834
Alignment:
Q  6 tttcgtgttgcg-taagccatttttctcccttttttggggacttggccattttgagagcatatannnnnnnngagatgtcttgtttgaataatcatttgt 104  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  34695033 tttcgtgttgcgctaagccatttttctcccttttttggggacttggccattttgagagcatatattttttatgagatgtcttgtttgaataatcatttgt 34694934  T
Q  105 gtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatggatatat 204  Q
    |  ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  34694933 g--acaacttttaggacaaccctgaatttacaaagaaaattaggtattgacatgaaaatcaaagcaatagagagaaattaaaaacataatatggatatat 34694836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 230 - 345
Target Start/End: Original strand, 13749133 - 13749248
Alignment:
Q  230 ggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtct 329  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||   ||||| | ||||| | ||||||||||||||||| ||||||||     
T  13749133 ggtgccaattttggtgggcaagttcatacaaagctttgctctggcttagaacggggccccccgcaagtgggcagtggaattggtcccctcggattagtca 13749232  T
Q  330 gtccttggatcggata 345  Q
    ||||||||||| ||||    
T  13749233 gtccttggatcagata 13749248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 33746947 - 33747084
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| ||| |||  ||||||||||||||| | |||| ||||||||| || || ||||||||||  ||||| | ||||||||||||||||||| |     
T  33746947 ttcgattccctctagtgttaatttcggtgggcaaattcatataaagctttgttctggtttagaacggag-cccccgcaagtggacggtggaattggttct 33747045  T
Q  317 ctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||| ||||||||  ||||||||||||||| |||||||||    
T  33747046 ctcggattagtcgatccttggatcggataccgagttttc 33747084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 4718710 - 4718847
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  4718710 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 4718807  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  4718808 cctcggattagtcgattcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 20305973 - 20306110
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||| ||||| |||| |||||  ||||| | ||||| | ||||| |||||| ||||||||    
T  20305973 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacggga-cccccgcaagtgggcggtgggattggtcc 20306070  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  ||||||||||||||| |||||||||    
T  20306071 cctcgaattagtcgatccttggatcggataccgagttttc 20306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 21092606 - 21092743
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||| ||||| |||| |||||  ||||| | ||||| | ||||| |||||| ||||||||    
T  21092606 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacggga-cccccgcaagtgggcggtgggattggtcc 21092703  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  ||||||||||||||| |||||||||    
T  21092704 cctcgaattagtcgatccttggatcggataccgagttttc 21092743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 18128578 - 18128714
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||  |||||||||||||||||||||| | |||||| | |||||||||| |||||  |||||   ||||| | ||||| |||||| ||||||||     
T  18128578 ttcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggtcct 18128676  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||| || ||||||||| ||| ||||||||    
T  18128677 ctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 40517430 - 40517319
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatag--agagaaattaa 185  Q
    |||||| |||||||| | ||||| ||| || || |||| | ||||||||||||||| |||||||||||||||||||||||| |||||  ||| ||| |||    
T  40517430 tttgaacaatcatttttatgacatcttataagacaaccataaatttacaaagaaaagtagatattgacacgaaaatcaaagcaatagaaagataaaataa 40517331  T
Q  186 aaacataatatg 197  Q
    ||||||||||||    
T  40517330 aaacataatatg 40517319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 2618251 - 2618388
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||| ||||| |||| |||||  ||||||  ||||| | ||||| |||||| ||||||||    
T  2618251 ttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggag-cccccgcaagtgggcggtgggattggtcc 2618348  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||  |||||||||    
T  2618349 cctcggattagtcgattcttggatcggattccgagttttc 2618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 34237791 - 34237654
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||  |||||| ||||||||    
T  34237791 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgagcggtgggattggtcc 34237694  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  34237693 cctcggattagtcgattcttggatcggataccgagttttc 34237654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 3403638 - 3403588
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttg 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3403638 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaaactttg 3403588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 36514460 - 36514569
Alignment:
Q  85 ttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaatta 184  Q
    ||||||||| || ||||||||||| || |||| ||| |||| | | |||||||| |||| ||| |||||| ||||||| |||| |||||||||||| |||    
T  36514460 ttgtttgaacaaccatttgtgtgataatttttgggagaaccgtaattttacaaaaaaaaataggtattgatacgaaaaccaaaataatagagagaagtta 36514559  T
Q  185 aaaacataat 194  Q
    ||||||||||    
T  36514560 aaaacataat 36514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 34639333 - 34639277
Alignment:
Q  227 tctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacgg 283  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  34639333 tctggtgccaatttcggtgggtaagtccatacagagctttgctctggcttagaacgg 34639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 3734759 - 3734622
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | | ||| | |||| ||||||||    
T  3734759 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaaatgggcagtgggattggtcc 3734662  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  3734661 cctcggattagtcgattcttggatcggataccgagttttc 3734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 8765662 - 8765525
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||| ||||| |||| |||||  |||||   | ||| | ||||| |||||| ||||||||    
T  8765662 ttcgattccctctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggg-ctcccgcaagtgggcggtgggattggtcc 8765565  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  8765564 cctcggattagtcgattcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 39349321 - 39349458
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||||| |||| |||    
T  39349321 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattgatcc 39349418  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| | |||||||    
T  39349419 cctcggattagtcgattcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 21603295 - 21603431
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| | |||||||||||||||||||| ||| ||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  21603295 ttcgattccctatggtgccaatttcggtgggctaagcccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 21603392  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  | ||||||||||||| ||||||||    
T  21603393 cctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 353
Target Start/End: Complemental strand, 15259542 - 15259407
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| ||||| |||||||||    
T  15259542 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgtaattggtcc 15259445  T
Q  316 cctcagattagtctgtccttggatcggataacgagttt 353  Q
    ||||  |||||||  | ||||||||||||  |||||||    
T  15259444 cctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 28193539 - 28193674
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||  ||||||||||| ||||| |||| |||||  |||||   ||||  | ||||| |||||| ||||||||    
T  28193539 ttcgattccctctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacgggg-cccctacaagtgggcggtgggattggtcc 28193636  T
Q  316 cctcagattagtctgtccttggatcggataacgagttt 353  Q
    |||| ||||||||  | ||||||||||||| |||||||    
T  28193637 cctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 355
Target Start/End: Original strand, 42328072 - 42328206
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| |||| ||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | |||||||| ||| |||||||||||    
T  42328072 gattccctctgttgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccacaagtggacgatgggattggtcccct 42328169  T
Q  319 cagattagtctgtccttggatcggataacgagttttc 355  Q
    |  |||||||  | ||||||||||||| |||||||||    
T  42328170 cgaattagtcgattcttggatcggataccgagttttc 42328206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 14633019 - 14633156
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||| |||||| ||||| |||||| | |  || | ||||| |||||| ||||||||    
T  14633019 ttcgattccctctggtgccaatttcggtgggctaagtctatacagagc-ttgctctggctttgaacgg-agcgtccacaagtgggcggtgggattggtcc 14633116  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||  ||||||||  | ||||||||||||| | |||||||    
T  14633117 ccttggattagtcgattcttggatcggataccaagttttc 14633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 27854710 - 27854773
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||||||||||||| |||||| ||| |||||||||  |||||||||||| ||||||||||||    
T  27854710 tttacaaagaaaattaaatattggcacaaaaatcaaaacaatagagagaaagtaaaaacataat 27854773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 41070826 - 41070892
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacgg 283  Q
    ||||||||| | ||||| |||||||||||||||||| |||||| |||||| ||| ||||||||||||    
T  41070826 ttcgattccctttggtgtcaatttcggtgggcaagttcatacatagctttactctggcttagaacgg 41070892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 33100412 - 33100469
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaa 188  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||||||||||| ||||||    
T  33100412 tttacaaagaaaagtatgtattgacacaaaaatcaaagtaatagagagaaaataaaaa 33100469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 37133804 - 37133872
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatag--agagaaattaaaaacataatatg 197  Q
    |||||||||||||| | |||||||||| |||||||||| |||||  ||||||| |||||||||||||||    
T  37133804 tttacaaagaaaatgatatattgacacaaaaatcaaagcaatagaaagagaaagtaaaaacataatatg 37133872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 39856188 - 39856119
Alignment:
Q  110 aacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||| || || | |||||| |||||||||| ||||||||||||| |||||||||| ||||||||||    
T  39856188 aacttttaagacaatcatgaattaacaaagaaaaatagatattgacacaaaaatcaaagcaatagagaga 39856119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 7331248 - 7331359
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagta--atagagagaaattaa 185  Q
    ||||||| ||||||||  ||| ||||| |||||||||| | || || ||||||||| |||||||||||| |||||  ||| ||  ||||||| ||| |||    
T  7331248 tttgaatgatcatttgcatgataacttataggataaccataaacttgcaaagaaaaatagatattgacatgaaaactaaaataatatagagataaaataa 7331347  T
Q  186 aaacataatatg 197  Q
    ||||||||||||    
T  7331348 aaacataatatg 7331359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 355
Target Start/End: Original strand, 19471677 - 19471812
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| |||||||||||||| |||| || ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| || ||| |||||||||||    
T  19471677 gattccctctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccct 19471775  T
Q  319 cagattagtctgtccttggatcggataacgagttttc 355  Q
    |  |||||||  | ||||||||||||| |||||||||    
T  19471776 cgaattagtcgatacttggatcggataccgagttttc 19471812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 355
Target Start/End: Original strand, 19542601 - 19542736
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| |||||||||||||| |||| || ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| || ||| |||||||||||    
T  19542601 gattccctctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccct 19542699  T
Q  319 cagattagtctgtccttggatcggataacgagttttc 355  Q
    |  |||||||  | ||||||||||||| |||||||||    
T  19542700 cgaattagtcgatacttggatcggataccgagttttc 19542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 355
Target Start/End: Complemental strand, 19590095 - 19589960
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| |||||||||||||| |||| || ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| || ||| |||||||||||    
T  19590095 gattccctctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccct 19589997  T
Q  319 cagattagtctgtccttggatcggataacgagttttc 355  Q
    |  |||||||  | ||||||||||||| |||||||||    
T  19589996 cgaattagtcgatacttggatcggataccgagttttc 19589960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 45405661 - 45405613
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  45405661 tttacaaagaaaatcatatattgacacgaaaatcaaagcaatagagaga 45405613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 32879344 - 32879481
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| |||| |||||| ||| |||||| | | |  |||||   ||||| | ||||| |||||| ||||||||    
T  32879344 ttcgattccctctggtgccaatttcggtgggctaagttcatacagagc-ttgctctgacattaaacgg-ggcccccacaagtgggcggtgggattggtcc 32879441  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||| ||||| |||||||||    
T  32879442 cctcggattagtcgattcttggattggataccgagttttc 32879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 279
Target Start/End: Original strand, 3794856 - 3794918
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttaga 279  Q
    |||| |||| ||||||||||||||||| |||||||| ||||||||||||| |||  |||||||    
T  3794856 ttcggttccctctggtgccaatttcggcgggcaagttcatacaaagctttactcgagcttaga 3794918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 7679220 - 7679162
Alignment:
Q  133 tacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacat 191  Q
    ||||||||||  ||||||||||||||||||||||| | | ||||||||| |||||||||    
T  7679220 tacaaagaaatatagatattgacacgaaaatcaaaattagagagagaaagtaaaaacat 7679162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 20505618 - 20505668
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttg 267  Q
    ||||||| | ||||||||||||||| | |||||||||||||||||||||||    
T  20505618 ttcgatttcttctggtgccaatttcagcgggcaagtccatacaaagctttg 20505668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 28964098 - 28964140
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatac 258  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  28964098 ttcgattccatctggtgccaatttcggtgggctaagtccatac 28964140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 6953143 - 6953094
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  6953143 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 6953094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 13580039 - 13579903
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||  |||||||||||||| | || |||||| |||||  ||||||||||  ||||||||||| | ||||| | |||||||||||  |||||| ||    
T  13580039 ttcgattctctctggtgccaattttgttgagcaagttcataccgagctttgctctagcttagaacgg-agcccccacaagtggacggtgagattggttcc 13579941  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
     || ||||| |  |||||| |||||||||  |||||||    
T  13579940 atcggattaattggtccttagatcggatactgagtttt 13579903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 2639470 - 2639410
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||| ||||||||  | ||||||||||||| |||||||||    
T  2639470 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 888208 - 888247
Alignment:
Q  140 aaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  888208 aaaaatagatattgacacgaaaaccaaagtaatagagaga 888247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 5740429 - 5740382
Alignment:
Q  308 attggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||| |||||||| |||||||||||||| | |||||||||    
T  5740429 attggtcccctcggattagtcggtccttggatcggacaccgagttttc 5740382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 12734951 - 12735021
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagta--atagagagaaattaaaaacataatatg 197  Q
    ||||||||| ||||| ||| ||||||||| ||||||||||||  ||||||| ||  |||||||||||||||    
T  12734951 aatttacaatgaaaagtaggtattgacacaaaaatcaaagtaatatagagataaggtaaaaacataatatg 12735021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 13106652 - 13106561
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||| || |||||  |||||||||||||  | |||| | |||||||||||||||  || ||||||||| |||| ||||| ||||||||||    
T  13106652 tttgaacaaccatttaggtgacaacttttataacaaccataaatttacaaagaaaaagaggtattgacacaaaaagcaaagcaatagagaga 13106561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 22200696 - 22200629
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacgga 284  Q
    ||||||||| ||| ||||||||||||  ||  |||| |||||| |||||||||| |||||||||||||    
T  22200696 ttcgattccctctagtgccaatttcgagggaaaagttcatacagagctttgctctggcttagaacgga 22200629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 34610823 - 34610686
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||| ||||||||||||||| | ||||| ||||| ||||| |||| |||||  |||| |  ||| | | ||||| |||| ||||||||||    
T  34610823 ttcgattccctctgatgccaatttcggtggtctaagtctatacagagctt-gctctggctttaaacg-agcccctcgcaagtgggcggtagaattggtcc 34610726  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  | ||||||||||||| |||||||||    
T  34610725 cctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 8387580 - 8387538
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccataca 259  Q
    ||||||| | |||||||||||||| ||||||||||||||||||    
T  8387580 ttcgatttcctctggtgccaattttggtgggcaagtccataca 8387538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 10839424 - 10839489
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatag--agagaaattaaaaacataat 194  Q
    |||||||||||||||| |||||| ||| |||| ||||| |||||  ||||||| ||||||||||||    
T  10839424 tttacaaagaaaattaaatattggcacaaaaaccaaagcaatagatagagaaagtaaaaacataat 10839489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 42643254 - 42643118
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| ||| |||||| | |||  |||||    |||| | ||||| |||||| ||||||||    
T  42643254 ttcgattccctctagtgccaatttcggtgggctaagtccatacagagc-ttgctctgtcttgaaacgg-gggccccgcaagtgggcggtgggattggtcc 42643157  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||  ||||||   | ||||||||||||| ||||||||    
T  42643156 cctcgcattagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 7472944 - 7473016
Alignment:
Q  106 tgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| |||||| | ||||||||||||||| ||| ||||  ||||||||  |||| ||||||||||    
T  7472944 tgacaacttttagaataaccat-aatttacaaagaaaaataggtatttgcacgaaaactaaagcaatagagaga 7473016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 21239425 - 21239466
Alignment:
Q  228 ctggtgccaatttcggtgggcaagtccatacaaagctttgct 269  Q
    |||||||||||||||||||||| ||||||| ||| |||||||    
T  21239425 ctggtgccaatttcggtgggcatgtccatataaaactttgct 21239466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 27746471 - 27746422
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| | |||||||||||||||||||| ||||||||||| |||||    
T  27746471 ttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt 27746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 29025414 - 29025341
Alignment:
Q  106 tgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||| ||| ||||   | |||||||||||||| || ||||||||| |||| ||||| ||||||||||    
T  29025414 tgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaatagagaga 29025341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 144186 - 144270
Alignment:
Q  119 gataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatggatata 203  Q
    ||||||| | |||||||||||||||| ||||||| |||  | || ||||  |||||||||||| || ||||||||| || |||||    
T  144186 gataaccataaatttacaaagaaaatcagatattaacaaaagaaccaaaacaatagagagaaaatagaaacataatgtgaatata 144270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 6016041 - 6015962
Alignment:
Q  119 gataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacataatat 196  Q
    ||||||| |||||||| ||||||||||| ||||||| |  |||||||||| |||  | ||| |||||||||| |||||||    
T  6016041 gataaccatgaatttataaagaaaattaaatattgatataaaaatcaaagcaataaaaagataaattaaaaatataatat 6015962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 11253484 - 11253532
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| || ||||||||| |||| ||||| ||||||||||    
T  11253484 tttacaaagaaaatgaggtattgacacaaaaaccaaagcaatagagaga 11253532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 16990725 - 16990785
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| | |||||||||  |||||||| |||||||||||||||| | |||||||    
T  16990725 agtgggcggtgggactggtccccttggattagtcggtccttggatcggataccaagttttc 16990785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 28756667 - 28756615
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaa 181  Q
    |||||||||||||||||| ||||| ||||| ||| ||||  ||||||||||||    
T  28756667 aatttacaaagaaaattatatattaacacggaaaccaaaacaatagagagaaa 28756615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 32020360 - 32020472
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatat--tgacacgaaaatcaaagtaat----agagagaaa 181  Q
    |||||| ||| |||| |||||||| |||| ||| || | | |||||| |||||||| || ||||  ||||||||||||||||| |||    |||||||||    
T  32020360 tttgaacaataatttatgtgacaaattttgggacaatcataaatttataaagaaaaatatatatattgacacgaaaatcaaagcaatagcgagagagaaa 32020459  T
Q  182 ttaaaaacataat 194  Q
     ||||||||||||    
T  32020460 gtaaaaacataat 32020472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 32501138 - 32501186
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||| |||| || || |||||| |||||||||||||||||||||    
T  32501138 tttacaaaggaaatgaggtagtgacacaaaaatcaaagtaatagagaga 32501186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 33534618 - 33534566
Alignment:
Q  303 gtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||| || |||||||| ||||||||||||| || |||||||||    
T  33534618 gtgggattggtcccttcggattagtcggtccttggatcggttaccgagttttc 33534566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 8192487 - 8192351
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| |||||||||||| |||||||||||||||||| | |||||||||| ||||||||||||   ||| | | ||||| |||||| ||||| |||    
T  8192487 ttcgattccctctggtgccaatgtcggtgggcaagtccatatagagctttgctctggcttagaacgg--cccctcgcaagtgggcggtgggattgggccc 8192390  T
Q  317 ctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||| |||||||| |||||||||||||||| |||||||||    
T  8192389 ctcggattagtcggtccttggatcggataccgagttttc 8192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 19174824 - 19174959
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| ||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||||   ||||   | ||| |||||| |||| ||||    
T  19174824 ttcgattccttctggtgccaatttcggtgggtaggtccatacagagctttgctctggcttagaacgga--gccccgtaaatgggcggtgggattgatccc 19174921  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||| ||||| || |||||||||||||||| ||| ||||    
T  19174922 ctcggattaatcggtccttggatcggataccgaatttt 19174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 15038020 - 15038157
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| | |||||||||||||||||||| ||||||||||| ||||| |||  |||||  ||||||  ||||| | ||||| |||||| ||||||||    
T  15038020 ttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggag-cccccgcaagtgggcggtgggattggtcc 15038117  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||||  | ||||||||||||| |||||||||    
T  15038118 cctcagattagtcgattcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 33827709 - 33827572
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||| ||||| |||| |||||  ||||| | ||||  | ||||| |||||| ||||||||    
T  33827709 ttcgattccctctggtgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacggga-cccctgcaagtgggcggtgggattggtcc 33827612  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||  ||||||||  | ||||||||||||| |||||||||    
T  33827611 ccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 44946189 - 44946052
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| | |||||||||||||||||||| ||||||||||| | ||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  44946189 ttcgattccctttggtgccaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggc-cccccgcaagtgggcggtgggattggtcc 44946092  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  44946091 cctcggattagtcgattcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 14486963 - 14487023
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||| |||||||| |||||||||||||||| |||||||||    
T  14486963 agtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 77 - 202
Target Start/End: Complemental strand, 31296721 - 31296594
Alignment:
Q  77 gagatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagag 176  Q
    ||||||| || |||||| || |||| ||||||||||||||| || |||| | ||||||||||||||| |||||||| ||| | ||| ||||  |||||||    
T  31296721 gagatgtgttatttgaacaaccattagtgtgacaacttttatgacaaccataaatttacaaagaaaaatagatattaacatggaaaccaaaacaatagag 31296622  T
Q  177 --agaaattaaaaacataatatggatat 202  Q
      ||||| |||||| |||||||| ||||    
T  31296621 acagaaagtaaaaatataatatgaatat 31296594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 32344658 - 32344590
Alignment:
Q  99 atttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaa 167  Q
    ||||||||||||| |||||| |||||| | ||||||||||||||| || |||||||||| |||||||||    
T  32344658 atttgtgtgacaatttttagaataaccataaatttacaaagaaaaataaatattgacacaaaaatcaaa 32344590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 35171861 - 35171998
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||  ||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  35171861 ttcgattccctctggcaccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 35171958  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | |||| |||||||| |||||||||    
T  35171959 cctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 354
Target Start/End: Complemental strand, 11941334 - 11941210
Alignment:
Q  229 tggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagt 327  Q
    |||||||||||| ||||||  ||||||||||| ||||| |||| |||||  ||||| | ||||| | ||||| |||||| |||||||||||| |||||||    
T  11941334 tggtgccaattttggtgggttaagtccatacagagctt-gctctggctttaaacggga-cccccgcaagtgggcggtgggattggtcccctcggattagt 11941237  T
Q  328 ctgtccttggatcggataacgagtttt 354  Q
    |  | ||||||||||||| ||||||||    
T  11941236 cgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 28194269 - 28194137
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||         |||||||||||   ||||| | ||| | |||||| ||||||| |    
T  28194269 ttcgattctctctggtgccaatttcggtgggcaagtccatacagagcaaaa-----gcttagaacgggg-cccccgcaagtaggcggtgggattggtctc 28194176  T
Q  317 ctcagattagtctgtccttggatcggataacgagttttc 355  Q
     ||||||||||| |||||||||||||||| |||||||||    
T  28194175 gtcagattagtcggtccttggatcggataccgagttttc 28194137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 194
Target Start/End: Complemental strand, 42430822 - 42430714
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga--aattaa 185  Q
    |||||| || ||||||||||||||||||| | | |||| | | ||||||||||||| ||| |||||||||| ||| ||||  ||||||||||  || |||    
T  42430822 tttgaacaaccatttgtgtgacaacttttggaacaaccataagtttacaaagaaaagtaggtattgacacggaaaccaaaacaatagagagaggaagtaa 42430723  T
Q  186 aaacataat 194  Q
    |||||||||    
T  42430722 aaacataat 42430714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 2140619 - 2140485
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| ||||||| ||||||||||||   |||||||||| ||||| |||| |||||  || ||   ||||| | ||||| |||||| |||||||||    
T  2140619 ttcgattccctctggtgtcaatttcggtgg---agtccatacagagctt-gctctggctttaaatgggcccccccgcaagtgggcggtgggattggtccc 2140524  T
Q  317 ctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||| ||||||||  |  |||||||||||| |||||||||    
T  2140523 ctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 4618810 - 4618762
Alignment:
Q  228 ctggtgccaatttcggtgggcaagtccatacaaagctttgctccggctt 276  Q
    |||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  4618810 ctggtgccaatttcggcgggcaagtccatacaaaactttgctctggctt 4618762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 28495012 - 28494921
Alignment:
Q  108 acaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacataatatg 197  Q
    |||||||||  || |||| | |||||||| |||||||||| ||||||||| |||| |||| ||||  ||||||||| |||||||||||||||    
T  28495012 acaacttttgtgacaaccataaatttacacagaaaattaggtattgacacaaaaaccaaaataatttagagagaaaataaaaacataatatg 28494921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 33583162 - 33583230
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatg 197  Q
    |||||||||||||||| || ||||||||  |||| ||||  |||||||||||| |||||||||||||||    
T  33583162 aatttacaaagaaaatgaggtattgacaaaaaaaacaaaacaatagagagaaagtaaaaacataatatg 33583230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 41314053 - 41314189
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||| |||||||||||||| ||||| ||||| ||||| |||| | |||  ||||| ||||| |   |||||||||||| ||||||||    
T  41314053 ttcgattccctctggtgtcaatttcggtgggctaagtctatacagagctt-gctctgactttaaacgggatcccgca--agtggacggtgggattggtcc 41314149  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||| ||  | ||| ||||||||| | |||||||    
T  41314150 cctcagattaatcgattcttcgatcggataccaagttttc 41314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 7667283 - 7667204
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaa 167  Q
    |||||| ||| |||||||| | || |||||| | |||| | |||||||||||||||||| |||||||||| |||||||||    
T  7667283 tttgaacaattatttgtgtaataaattttagtacaaccataaatttacaaagaaaattaaatattgacacaaaaatcaaa 7667204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 10325035 - 10325090
Alignment:
Q  297 tggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtt 352  Q
    |||||||||||||||||||||||||||||||| |  ||||||| ||||| ||||||    
T  10325035 tggacggtggaattggtcccctcagattagtcagctcttggattggatatcgagtt 10325090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 353
Target Start/End: Original strand, 12543219 - 12543339
Alignment:
Q  231 gtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtctg 330  Q
    |||||||||| |||||||||||||||||| ||||||||||  | |||||| ||   ||||| | |||||| ||||| |||| ||||||   ||||||| |    
T  12543219 gtgccaattttggtgggcaagtccatacagagctttgctctagtttagaaagg--gcccccgcaagtggatggtgggattgctccccttgaattagtcgg 12543316  T
Q  331 tccttggatcggataacgagttt 353  Q
    |||||| |||||| | |||||||    
T  12543317 tccttgaatcggagaccgagttt 12543339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 17324827 - 17324961
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  || ||   ||||| | ||||| |||||| ||| ||||    
T  17324827 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatgg--gcccccacaagtgggcggtgggattagtcc 17324923  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||||  | ||| ||||||||| ||||||||    
T  17324924 cctcaaattagtcgattctt-gatcggatatcgagtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 18708538 - 18708648
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||| ||| |||| | |||||||| ||||||| || |||||| |||||||||| | |||| ||||| | ||||| | | |||||||||| |||| ||||    
T  18708538 ttcgactccctctgataccaatttcagtgggcatgttcatacagagctttgctctgacttaaaacggga-cccccgcaaatggacggtgggattgatccc 18708636  T
Q  317 ctcagattagtc 328  Q
    ||||||||||||    
T  18708637 ctcagattagtc 18708648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 19525532 - 19525489
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaa 260  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  19525532 ttcgattccctctggtgccaattttggtgggcaagtccatacaa 19525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 31778169 - 31778228
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||  |||||||| |||||||||||| || ||||||||||||| ||||||||    
T  31778169 agtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 12070977 - 12070904
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatag--agagaaattaaaaacataatatggatat 202  Q
    |||||||||||||| |  |||||||||||||||||||| |||||  ||||||| |||||| ||||| |||||||    
T  12070977 tttacaaagaaaatcatgtattgacacgaaaatcaaagcaatagaaagagaaagtaaaaatataatgtggatat 12070904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 3405288 - 3405239
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagcttt 266  Q
    ||||||||| ||||||||||||||   |||||||||||||||||||||||    
T  3405288 ttcgattccctctggtgccaattttaatgggcaagtccatacaaagcttt 3405239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 8427735 - 8427634
Alignment:
Q  78 agatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagaga 177  Q
    |||||| || |||||| ||| ||||  ||| |||||||| | | |||| | |||||| |||| ||||||| |||||||||||||| |||| |||||||||    
T  8427735 agatgtgttatttgaacaattattttggtggcaacttttggaacaaccataaatttataaaggaaattagttattgacacgaaaaccaaaataatagaga 8427636  T
Q  178 ga 179  Q
    ||    
T  8427635 ga 8427634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 10582126 - 10582077
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  10582126 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 10582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 10833535 - 10833652
Alignment:
Q  77 gagatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagag 176  Q
    ||||||| || |||||| || || ||| ||||||||||||  || ||||   ||||||||||| ||| |||||| | ||||| ||| ||||| |||||||    
T  10833535 gagatgtgttatttgaacaaccaattgagtgacaacttttgtgacaaccactaatttacaaaggaaagtagatagttacacggaaaccaaagcaatagag 10833634  T
Q  177 agaaattaaaaacataat 194  Q
    ||||| |||||| |||||    
T  10833635 agaaagtaaaaaaataat 10833652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 27490672 - 27490740
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacataatatg 197  Q
    |||||||||||||| |  |||| |||| |||||||||| |||  |||||||||||||||||||||||||    
T  27490672 tttacaaagaaaatgatgtattaacacaaaaatcaaagcaatagagagagaaattaaaaacataatatg 27490740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 13747559 - 13747499
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||| ||||| ||||||||||| |||  ||||||||||||||| ||| |||||    
T  13747559 agtggacggtgggattgggcccctcagatttgtcgatccttggatcggataccgaattttc 13747499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 17999619 - 17999667
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||||||||    
T  17999619 tttacaaagaaaaatatgtattggcacgaaaatcaaagtaatagagaga 17999667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 37737913 - 37737961
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||| |||| |||||||||||| |||||||||| ||||||||||    
T  37737913 tttacaaaggaaatgagatattgacacaaaaatcaaagcaatagagaga 37737961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 40700325 - 40700277
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||| ||| |||| || ||||||||||||||||||||||||||||||||    
T  40700325 tttataaaaaaaaatatatattgacacgaaaatcaaagtaatagagaga 40700277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 43374461 - 43374329
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||  ||||||||| |||||| |||||       || ||||| | ||||  |||||| ||||||||    
T  43374461 ttcgattccctctggtgccaatttcggtgggctaagtttatacaaagc-ttgctctggctt------taagcccccgcaagtgagcggtgggattggtcc 43374369  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    | || ||||||||  | ||||||||||||| |||||||||    
T  43374368 cttcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 7663966 - 7664056
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||| ||||||||  ||||||| ||||| || |||| | |||||||||||||||  || ||||||||| |||| ||||| ||||||||||    
T  7663966 tttgaacaatcatttaggtgacaa-ttttatgacaaccataaatttacaaagaaaaagaggtattgacacaaaaaccaaagcaatagagaga 7664056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 355
Target Start/End: Original strand, 28668946 - 28669071
Alignment:
Q  229 tggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagt 327  Q
    |||||||||||||||||| | ||||||||||| ||||| |||  |||||  |||||   ||||| | ||||| |||||| |||||||||||| |||||||    
T  28668946 tggtgccaatttcggtggactaagtccatacagagctt-gctttggctttaaacgggg-cccccacaagtgggcggtgggattggtcccctcggattagt 28669043  T
Q  328 ctgtccttggatcggataacgagttttc 355  Q
    |  |  |||||||||||| |||||||||    
T  28669044 cgatttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 41329980 - 41330039
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||  ||||||||||||||||||||| || |||||| |||||| ||||||||    
T  41329980 agtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 355
Target Start/End: Complemental strand, 1845102 - 1845048
Alignment:
Q  301 cggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||||||||||| |||||||  | ||||| ||||||| |||||||||    
T  1845102 cggtggaattggtcccctcaaattagtcgattcttggctcggataccgagttttc 1845048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 13711306 - 13711356
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||| ||| |||||| ||||||| ||| ||||||||||||||||    
T  13711306 aatttacaaaggaaagtagatagtgacacggaaaccaaagtaatagagaga 13711356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 32845152 - 32845194
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatac 258  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  32845152 ttcgattccctctggtgccaatttcggtgggctaagtccatac 32845194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 3412450 - 3412551
Alignment:
Q  85 ttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacac-gaaaatcaaagtaatagagagaaatt 183  Q
    ||||||||| ||  |||| |||||||||||||   | |||| | ||||||||||||||| ||||||||| |||  |||||||||| |||||| ||| |||    
T  3412450 ttgtttgaacaactatttatgtgacaacttttgaaacaaccataaatttacaaagaaaagtagatattgccacaaaaaatcaaagcaatagaaagagatt 3412549  T
Q  184 aa 185  Q
    ||    
T  3412550 aa 3412551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 4852667 - 4852716
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggat 344  Q
    ||||||||||||||||||||||||| ||||| ||  | ||||||||||||    
T  4852667 agtggacggtggaattggtcccctcggattaatcgattcttggatcggat 4852716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 16049229 - 16049286
Alignment:
Q  133 tacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaaca 190  Q
    ||||||||||| |||||||||| |||||||  ||| ||||||||||||| | ||||||    
T  16049229 tacaaagaaaagtagatattgatacgaaaactaaaataatagagagaaaatgaaaaca 16049286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 36390704 - 36390655
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||| | |||||||||||||||||||| | |||||||||||||||||    
T  36390704 ttcgatttcctctggtgccaatttcggtggactaagtccatacaaagctt 36390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 194
Target Start/End: Complemental strand, 44050187 - 44050080
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaa 185  Q
    |||||| || |||||||| ||||||||||  || |||| | ||||||||||||||| ||  |||||||||| ||| ||||| |||  ||| ||||| |||    
T  44050187 tttgaacaaccatttgtgcgacaacttttgagacaaccataaatttacaaagaaaa-tatgtattgacacggaaaccaaagcaataaagaaagaaagtaa 44050089  T
Q  186 aaacataat 194  Q
    |||||||||    
T  44050088 aaacataat 44050080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 45271445 - 45271494
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||| |||||    
T  45271445 ttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt 45271494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 168
Target Start/End: Complemental strand, 1836145 - 1836105
Alignment:
Q  129 aatttacaaagaaaa-ttagatattgacacgaaaatcaaag 168  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  1836145 aatttacaaagaaaaattagatatttacacgaaaatcaaag 1836105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 2076698 - 2076654
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaataga 175  Q
    |||||||||||||| || ||||||||| |||||||||| ||||||    
T  2076698 tttacaaagaaaatgaggtattgacacaaaaatcaaagcaataga 2076654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 3771501 - 3771453
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  ||||||||| || ||||||||||||||||||    
T  3771501 tttacaaagaaaagtacgtattgacacaaatatcaaagtaatagagaga 3771453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 18692098 - 18692158
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| ||||||||||||  |||||||  | ||||||||||||| |||||||||    
T  18692098 agtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 19529639 - 19529594
Alignment:
Q  149 tattgacacgaaaatcaaagtaatagagagaaattaaaaacataatat 196  Q
    ||||||||||||||||||| ||||||||||||  |||||| |||||||    
T  19529639 tattgacacgaaaatcaaaataatagagagaa--taaaaatataatat 19529594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 30943172 - 30943208
Alignment:
Q  232 tgccaatttcggtgggcaagtccatacaaagctttgc 268  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  30943172 tgccaatttcggtgggctagtccatacagagctttgc 30943208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 34516473 - 34516413
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||| ||||||||  | ||||||||||||| | |||||||    
T  34516473 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 35792581 - 35792625
Alignment:
Q  130 atttacaaagaaaat-tagatattgacacgaaaatcaaagtaata 173  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||    
T  35792581 atttacaaagaaaaaatagatattgacacgaaaatcaaaataata 35792625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 39147949 - 39147830
Alignment:
Q  77 gagatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaat--ag 174  Q
    ||||||| || |||||| || |||||   ||||||||||| ||| || | | |||||||||| ||||| || ||||||||| |||||||||  |||  |     
T  39147949 gagatgtgttatttgaacaaccattttaatgacaacttttgggacaatcataaatttacaaaaaaaatgaggtattgacacaaaaatcaaaacaatacaa 39147850  T
Q  175 agagaaattaaaaacataat 194  Q
    ||||||| ||||||||||||    
T  39147849 agagaaagtaaaaacataat 39147830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 40591254 - 40591286
Alignment:
Q  227 tctggtgccaatttcggtgggcaagtccataca 259  Q
    ||||||| |||||||||||||||||||||||||    
T  40591254 tctggtggcaatttcggtgggcaagtccataca 40591286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 41195713 - 41195665
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||| |||| |||||||||||| |||| ||||| ||||||||||    
T  41195713 tttacaaaggaaatgagatattgacacaaaaaccaaagcaatagagaga 41195665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 42532680 - 42532728
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||| |||||||| ||  ||||| |||||||||||||||||||||||||    
T  42532680 tttataaagaaaaatatgtattggcacgaaaatcaaagtaatagagaga 42532728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 43690948 - 43691000
Alignment:
Q  136 aaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaa 188  Q
    ||||||||||||||||| | |||||||||||| |||| || ||||| ||||||    
T  43690948 aaagaaaattagatattaatacgaaaatcaaaataatggaaagaaaataaaaa 43691000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 44976290 - 44976231
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggctt 276  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| || ||||||| |||||    
T  44976290 ttcgattccctctggtgccaattttggtgggctaagtccatacagag-tttgctctggctt 44976231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 44977439 - 44977506
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacataat 194  Q
    ||||||||||||||||  | ||||||||| |||| ||||| |||  ||||||||| ||||||||||||    
T  44977439 aatttacaaagaaaatggggtattgacacaaaaaccaaagcaatagagagagaaagtaaaaacataat 44977506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 19145547 - 19145412
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||  || ||  |||||| | ||||| |||||| |||||||||    
T  19145547 ttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctggctttaaatgg--tcccccgcaagtgggcggtgggattggtccc 19145450  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||| |||||||  || ||||||||||||| ||||||||    
T  19145449 ctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 32059576 - 32059439
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  32059576 ttcgattccttctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 32059479  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||| |||||||||||||||| |||||||||    
T  32059478 cctcggattagtcggtccttggatcggataccgagttttc 32059439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 36895486 - 36895622
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| | | || || | ||||| ||| || |||| || |    
T  36895486 ttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgctctggcttagaac-gtagccgccgcaagtgggcggggggattgttctc 36895584  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||  ||||||| || ||||||||||||| ||||||||    
T  36895585 ctcgaattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 4603838 - 4603975
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||| ||||  |||| |||||  |||||   ||||  | |||||||||||| ||||||||    
T  4603838 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagctc-gctctggctttaaacgggg-cccctgcaagtggacggtgggattggtcc 4603935  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||| |||||||||||||||| |||||||||    
T  4603936 cctcggattagtcggtccttggatcggataccgagttttc 4603975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 27498867 - 27498730
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  27498867 ttcgattccctctggtgccaatttcggtgggctaagtccatacatagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 27498770  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  27498769 cctcggattagtcgattcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 354
Target Start/End: Complemental strand, 930608 - 930486
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtc 328  Q
    |||||||||||||||||| ||| | |||||| ||||| |||||||||||||||  || ||| | | ||||||| |||  |||||||||||| ||||||||    
T  930608 tggtgccaatttcggtggacaaattcatacatagctt-gctccggcttagaac--aagccctcgcaagtggacagtgtgattggtcccctcggattagtc 930512  T
Q  329 tgtccttggatcggataacgagtttt 354  Q
     |||||||||||||||| ||||||||    
T  930511 ggtccttggatcggatatcgagtttt 930486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 24158302 - 24158166
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| ||||||| |||||||| |||| ||||||||||| |||||| ||| ||||||||||||   || |  | ||||| |||||  |||||||||    
T  24158302 ttcgattccttctggtgtcaatttcgatgggtaagtccatacatagctttactctggcttagaacgg-ggcctctgcaagtgggcggtgagattggtccc 24158204  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||| ||||||| |||||||| ||| ||||    
T  24158203 ctcagattagtcggtccttgaatcggataccgaatttt 24158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 354
Target Start/End: Complemental strand, 11926635 - 11926501
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | |||||  ||||| |||||||||||    
T  11926635 gattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccct 11926537  T
Q  319 cagattagtctgtccttggatcggataacgagtttt 354  Q
    | ||||||||  | ||||||||||||| ||||||||    
T  11926536 cggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 355
Target Start/End: Complemental strand, 8484794 - 8484660
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| |||||||||||||||||||||| |||| |||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| |||||||||||    
T  8484794 gattccctctggtgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcccct 8484697  T
Q  319 cagattagtctgtccttggatcggataacgagttttc 355  Q
    | ||||||||  | ||||||||||||| |||||||||    
T  8484696 cggattagtcgattcttggatcggataccgagttttc 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 38684269 - 38684405
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||  |||||| ||||||||    
T  38684269 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggg--cccccgcaagtgagcggtgggattggtcc 38684365  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| ||| |||||    
T  38684366 cctcggattagtcgattcttggatcggataccgatttttc 38684405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 18207268 - 18207405
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| || ||||||||||||||||||| ||||||||||| ||||| | || |||||  |||| |  ||||| | ||||| |||||| ||||||||    
T  18207268 ttcgattccctccggtgccaatttcggtgggctaagtccatacagagctt-gttctggctttaaacg-aggcccccgcaagtgggcggtgggattggtcc 18207365  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  18207366 cctcggattagtcgattcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 30485889 - 30486026
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  ||||||| |||||||||||||| ||||||||||| ||||| |||| |||||  |||| |  ||||| | ||||| |||||| ||||||||    
T  30485889 ttcgattcactctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacg-atgcccccgcaagtgggcggtgggattggtcc 30485986  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  30485987 cctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 355
Target Start/End: Complemental strand, 19456336 - 19456210
Alignment:
Q  227 tctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagatta 325  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||    |||| | ||||| |||||| |||||||||||| |||||    
T  19456336 tctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg--ccccgcaagtgggcggtgggattggtcccctcggatta 19456240  T
Q  326 gtctgtccttggatcggataacgagttttc 355  Q
    |||  | ||||||||||||| |||||||||    
T  19456239 gtcgattcttggatcggataccgagttttc 19456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 34310203 - 34310339
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| ||||| |||| |||||  ||||| | |||| |  |||||||||||| ||||||||    
T  34310203 ttcgattccctctggtgccaattttggtgggctaagtccatacagagctt-gctctggctttaaacgggacccccata-agtggacggtgggattggtcc 34310300  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||  |||| ||  | ||||||||||||| ||||||||    
T  34310301 cctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 33709637 - 33709502
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||    |||| |||||  ||||| | ||||| | ||||| |||||| ||||||||    
T  33709637 ttcgattccctctggtgccaatttcggtgggctaagtccatacagag---agctctggctttaaacggga-cccccacaagtgggcggtgggattggtcc 33709542  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| || ||||||    
T  33709541 cctcggattagtcgattcttggatcggataccgtgttttc 33709502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 19952172 - 19952061
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagag--agaaattaa 185  Q
    |||||| || ||||| ||| ||||||||  ||| |||| | ||||||||||||||||||| ||||||| || ||||||||  |||||||  ||||| |||    
T  19952172 tttgaaaaaccatttatgtcacaactttatggacaaccataaatttacaaagaaaattaggtattgacgcggaaatcaaaacaatagagatagaaagtaa 19952073  T
Q  186 aaacataatatg 197  Q
    ||||||||||||    
T  19952072 aaacataatatg 19952061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 15641241 - 15641105
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  15641241 ttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggtcc 15641144  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||| ||||||||| |||||||||    
T  15641143 cctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 33958175 - 33958249
Alignment:
Q  105 gtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| || |||| | |||||||||||||||  |||||||||||| |||| ||||| ||||||||||    
T  33958175 gtgacaacttttatgacaaccataaatttacaaagaaaaagagatattgacacaaaaaccaaagcaatagagaga 33958249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 6596462 - 6596397
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||||||||||||| || |||| |||| |||| ||||| |||||||||||| ||||||||||||    
T  6596462 aatttacaaagaaaatgaggtattaacacaaaaaccaaagcaatagagagaaagtaaaaacataat 6596397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 20270699 - 20270635
Alignment:
Q  130 atttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    ||||||||||||||| || |||||||||  ||||||||  |||| ||||||||||||||||||||    
T  20270699 atttacaaagaaaatgaggtattgacacataaatcaaaacaataaagagaaattaaaaacataat 20270635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 21943635 - 21943702
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacataat 194  Q
    |||||||||||||||| |||||||||||  |||||||||| |||  ||||||||| ||||||||||||    
T  21943635 aatttacaaagaaaataagatattgacagaaaaatcaaagcaataaagagagaaaataaaaacataat 21943702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 22392826 - 22392886
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| ||||||||||||||||||||||||||||  |  |||||||||||| |||||||||    
T  22392826 agtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttc 22392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 41699583 - 41699535
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  41699583 tttacaaagaaaattatgtattgacacgaaaatcaaattaatagagaga 41699535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 7085762 - 7085625
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| ||| |||||||||||||| ||||||||||| ||||| |||| | |||  |||||  |||||  | ||||| |||||| ||||||||    
T  7085762 ttcgattccctctagtgtcaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggtccccg-caagtgggcggtgggattggtcc 7085665  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | |||| |||||||| |||||||||    
T  7085664 cctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 10869701 - 10869564
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||  ||||| |||| |||||  || ||   || || | ||||| |||||| ||||||||    
T  10869701 ttcgattccatctggttccaatttcggtgggctaagtccacactgagctt-gctctggctttaaatgggg-cctccgcaagtgggcggtgggattggtcc 10869604  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||| || ||||||||||||| | |||||||    
T  10869603 cctcggattagtcggttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 27546238 - 27546158
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaag 168  Q
    |||||||||  ||||||||||||||||||  || || | | ||| ||||||||||| ||||||||||||  ||||||||||    
T  27546238 tttgaataactatttgtgtgacaacttttgagacaatcataaatgtacaaagaaaaatagatattgacataaaaatcaaag 27546158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 37495192 - 37495252
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||| ||||||||  | ||||||||||||| |||||||||    
T  37495192 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 41351163 - 41351103
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||| ||||||||  | ||||||||||||| |||||||||    
T  41351163 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 19844252 - 19844323
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatggatat 202  Q
    |||||||||||||  || ||||| |||  ||| ||||| |||||||||||| |||||||||||| |||||||    
T  19844252 tttacaaagaaaaagaggtattggcacacaaaccaaagcaatagagagaaagtaaaaacataatgtggatat 19844323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 20770263 - 20770212
Alignment:
Q  129 aatttacaaagaaaat-tagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||||  ||| |||||||||||||||||||| ||||||||||    
T  20770263 aatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaatagagaga 20770212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 22648167 - 22648218
Alignment:
Q  302 ggtggaattggtcccctcagattagtctgtccttggatcggataacgagttt 353  Q
    ||||| |||| |||||||||||||||| ||| |||||||||||| |||||||    
T  22648167 ggtgggattgatcccctcagattagtcggtctttggatcggataccgagttt 22648218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 22693073 - 22693132
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||| |||||||||||| ||||||||  | ||||||||||||| ||||||||    
T  22693073 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 31288082 - 31287945
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtggg-caagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||| |||||  | |||  |||||   ||||| | ||||| |||||| |||||||     
T  31288082 ttcgattccctttggtgccaatttcggtgggttaagtccatacaaagc-ttgctttgactttaaacgg-ggcccccgcaagtgggcggtgggattggtct 31287985  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  ||||||| || |||||| |||||| |||||||||    
T  31287984 cctcgaattagtcggttcttggaccggataccgagttttc 31287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 10837447 - 10837493
Alignment:
Q  308 attggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||||||||||||||||||  |||||| ||||||||| ||||||||    
T  10837447 attggtcccctcagattagttggtccttagatcggataccgagtttt 10837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 10865429 - 10865399
Alignment:
Q  149 tattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||||||||||||||||||||    
T  10865429 tattgacacgaaaatcaaagtaatagagaga 10865399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 15931120 - 15931162
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccataca 259  Q
    ||||||||| ||||||||||||||||||||  |||||||||||    
T  15931120 ttcgattccctctggtgccaatttcggtggctaagtccataca 15931162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 17097745 - 17097787
Alignment:
Q  133 tacaaagaaaattagatattgacacgaaaatcaaagtaataga 175  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  17097745 tacaaagaaaattaggtagtgacacaaaaatcaaagtaataga 17097787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 21353298 - 21353212
Alignment:
Q  106 tgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacata 192  Q
    ||||||||||| ||| |||| | | |||||||||||||  |  |||| |||| ||||  ||||||||||||||||| ||||||||||    
T  21353298 tgacaacttttgggacaaccataattttacaaagaaaaagatgtattaacacaaaaactaaagtaatagagagaaagtaaaaacata 21353212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 28597123 - 28597192
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagta--atagagagaaattaaaaacataatat 196  Q
    |||||| |||||||| || ||||||| |||||||||||| ||  ||||||| ||| ||||||||||||||    
T  28597123 aatttataaagaaaagtaaatattgatacgaaaatcaaaataatatagagaaaaaataaaaacataatat 28597192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 13375579 - 13375628
Alignment:
Q  108 acaacttttaggataaccctgaatttacaaagaaaattagatattgacac 157  Q
    ||||||||| |||||||| | |||||||| |||||| |||||||||||||    
T  13375579 acaacttttgggataaccataaatttacagagaaaagtagatattgacac 13375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 25586993 - 25587042
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  25586993 ttcgatttcctctggtgccaatttcggtgggctaagtccatacagagctt 25587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 35075521 - 35075582
Alignment:
Q  133 tacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||| ||| ||||||||||  || |||||||||| |||||||||||| |||||| |||||    
T  35075521 tacaaacaaatttagatattggtacaaaaatcaaagcaatagagagaaaataaaaatataat 35075582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 1293017 - 1293069
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaaga 140  Q
    ||||||||| ||||||| ||||||||||| ||| |||| | ||||||||||||    
T  1293017 tttgaataaccatttgtatgacaactttttggacaaccataaatttacaaaga 1293069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 10631340 - 10631288
Alignment:
Q  303 gtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||||||| ||||||||  | ||||||||||||| |||||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 21236421 - 21236361
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| ||| |||||||||||||||||  | |||| |||||||| |||||||||    
T  21236421 agtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttttc 21236361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 327
Target Start/End: Complemental strand, 23270643 - 23270549
Alignment:
Q  232 tgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagt 327  Q
    ||||||||||||||||| ||||||||||| ||||| |||  |||||  ||||||  ||||| | | |||||||||| |||||||||||| |||||||    
T  23270643 tgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggag-cccccgcaaatggacggtgggattggtcccctcggattagt 23270549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 27488016 - 27487968
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||||| |||||| ||| |||| ||||| ||||||||||    
T  27488016 tttacaaagaaaattaaatattggcacaaaaaccaaagcaatagagaga 27487968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 31206381 - 31206441
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||| ||||| | |||| |||||||| ||||||||  |||||| |||||||||    
T  31206381 agtggacggtgggattggactcctcggattagtcggtccttgggccggataccgagttttc 31206441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 33599093 - 33599042
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaa 181  Q
    |||||||||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  33599093 aatttacaaagaaaaagagatattgacac-aaaattaaagcaatagagagaaa 33599042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 37495108 - 37495167
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggctt 276  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| ||| |||||| |||||    
T  37495108 ttcgattccctctggtgccaattttggtgggctaagtccatacagagc-ttgctctggctt 37495167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 38631038 - 38630978
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||| ||||| ||  | ||||||||||||| |||||||||    
T  38631038 agtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 41321384 - 41321336
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||| |||| || ||||||||| |||| ||||||||||||||||    
T  41321384 tttacaaaggaaatgaggtattgacacaaaaaccaaagtaatagagaga 41321336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 28647034 - 28647170
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| || ||||||| |||||| |||||   ||||| | ||||| |||||| |||||| ||    
T  28647034 ttcgattccctctggtgccaatttcggtgggcaagtcaatacagagttttgctctggcttataacgg-ggcccccacaagtgggcggtgggattggttcc 28647132  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||  |||||||||||||||||||||||| ||||||||    
T  28647133 ctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 21574226 - 21574101
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtc 328  Q
    ||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||   ||||| | ||| | |||||  |||||||||||| ||||||||    
T  21574226 tggtgccaacttcggtgggcaagtccatacagagctttgcccaggcttagaacgg-ggcccccacaagtaggcggtgagattggtcccctcggattagtc 21574128  T
Q  329 tgtccttggatcggataacgagttttc 355  Q
     |||||||||||||||| |||||||||    
T  21574127 ggtccttggatcggataccgagttttc 21574101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 23330875 - 23330738
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||| ||| || |||||||||||||||||||||||||||||| |||||||||| |||||| ||||| | || || | ||||| ||||   |||||||||    
T  23330875 ttcgactccctccggtgccaatttcggtgggcaagtccatacagagctttgctctggcttaaaacggga-cctccgcaagtgggcggtaagattggtccc 23330777  T
Q  317 ctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||  ||||||||||||||| |||||||||    
T  23330776 ctcaaattagtcaatccttggatcggataccgagttttc 23330738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 654840 - 654704
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  654840 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggg--cccccgcaagtgggcggtgggattggtcc 654744  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||| || ||||||||||||| |||||||||    
T  654743 cctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 21835216 - 21835353
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  21835216 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 21835313  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  21835314 cctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 22119953 - 22120090
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  22119953 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 22120050  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  22120051 cctcggattagtcgattcttggatcggataccgagttttc 22120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 40543046 - 40542909
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  40543046 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 40542949  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  40542948 cctcggattagtcgattcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 18044172 - 18044308
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | |||||  ||||||||||||||    
T  18044172 ttcgattccctcttgtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccacaagtgggtggtggaattggtcc 18044269  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||||  | ||||||||||||| ||||||||    
T  18044270 cctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 2344364 - 2344501
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| ||||||  |  |||||  ||||| | ||||| | ||||  |||||| ||||||||    
T  2344364 ttcgattccttctggtgccaattttggtgggctaagtccatacagagcttttttt-ggctttaaacggga-cccccgcaagtgagcggtgggattggtcc 2344461  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||| |||||||||||||||| |||||||||    
T  2344462 cctcggattagtcggtccttggatcggataccgagttttc 2344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 2751336 - 2751473
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | | ||| |||||| ||||||||    
T  2751336 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaaatgggcggtgggattggtcc 2751433  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  2751434 cctcggattagtcgattcttggatcggataccgagttttc 2751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 7175998 - 7175861
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  ||| | | ||||| | ||||| |||||| ||||||||    
T  7175998 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagga-cccccgcaagtgggcggtgggattggtcc 7175901  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | |||||||||||||  ||||||||    
T  7175900 cctcggattagtcgattcttggatcggatactgagttttc 7175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 22703551 - 22703688
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||| |||| |||||  ||||| | ||||| | ||||| |||||| ||||||||    
T  22703551 ttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacggga-cccccgcaagtgggcggtgggattggtcc 22703648  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||| ||||||||| | |||||||    
T  22703649 cctcggattagtcgattctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 7275342 - 7275478
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  ||| |   ||||| | ||||| |||||| ||||||||    
T  7275342 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacag-ggcccccgcaagtgggcggtgggattggtcc 7275439  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  | ||||||||||||| ||||||||    
T  7275440 cctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 16374059 - 16374196
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||  ||||||||||| |  ||||||  |||||  ||||| | ||||| | | |||||||||| ||||||||    
T  16374059 ttcgattccctctggtgccaatttcggtgggttaagtccatacagaa-tttgctatggctttaaacggga-cccccgcaaatggacggtgggattggtcc 16374156  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  16374157 cctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 220 - 354
Target Start/End: Original strand, 22696388 - 22696522
Alignment:
Q  220 gattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacg-gaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| |||||||||||||||||||||  | |||||||| |||||||||| ||||||||||| |   ||| | | ||| | ||| || |||||||| ||    
T  22696388 gattccctctggtgccaatttcggtggg-gactccatacagagctttgctctggcttagaacgaggcccccgcgcaagtaggcggcgggattggtcctct 22696486  T
Q  319 cagattagtctgtccttggatcggataacgagtttt 354  Q
    | |||||||| |||||||||||||||| ||||||||    
T  22696487 cggattagtcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 8435831 - 8435781
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttg 267  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  8435831 ttcgatttcctctggtgccaatttcggtgggcaagtccatacaaagctttg 8435781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 17197086 - 17196950
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||||||||||||||| || ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  17197086 ttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 17196989  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||  |||||||  | ||||||||||||| ||||||||    
T  17196988 cctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 18889933 - 18890034
Alignment:
Q  95 aatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagag--aaattaaaaacata 192  Q
    ||||||||||||||||| |||||||| || | | ||||||||||||||||||| |||| ||||| ||| |||| ||||| ||||  ||| ||||||||||    
T  18889933 aatcatttgtgtgacaatttttaggacaatcataaatttacaaagaaaattaggtattaacacggaaaacaaaataataaagaggaaaaataaaaacata 18890032  T
Q  193 at 194  Q
    ||    
T  18890033 at 18890034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 355
Target Start/End: Original strand, 23092171 - 23092298
Alignment:
Q  227 tctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagatta 325  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | | |||||||||| |||||||||||| |||||    
T  23092171 tctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaaatggacggtgggattggtcccctcggatta 23092268  T
Q  326 gtctgtccttggatcggataacgagttttc 355  Q
    |||  | | ||||||||||| |||||||||    
T  23092269 gtcgattcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 35600844 - 35600751
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaa 181  Q
    |||||| || |||||| ||||||||||||  || ||||   ||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||    
T  35600844 tttgaacaaccatttgagtgacaacttttgtgacaaccactaatttacaaagaaaagtagatagtgacacggaaaccaaagtaatagagagaaa 35600751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 353
Target Start/End: Original strand, 35476418 - 35476541
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtc 328  Q
    |||||||||||| |||||| |||| |||||| |||||||||| |||||||||||| | ||||  | | ||  |||||||||||||| |||  ||||||||    
T  35476418 tggtgccaattttggtgggtaagttcatacagagctttgctctggcttagaacggga-cccctgcaaatgaccggtggaattggtctccttggattagtc 35476516  T
Q  329 tgtccttggatcggataacgagttt 353  Q
     ||| || ||||||||| |||||||    
T  35476517 ggtctttagatcggataccgagttt 35476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 11997914 - 11998051
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||| ||| |||||| |||||  ||| |   ||||| | ||||| |||||| ||||||||    
T  11997914 ttcgattccctctggtgccaatttcggttggctaagtccatacatagc-ttgctctggctttaaactg-ggcccccgcaagtgggcggtgggattggtcc 11998011  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  | ||||||||||||| |||||||||    
T  11998012 cctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 22925226 - 22925289
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    ||||||| |||||| |||||||||||| ||||| |||| |||| ||||||||||||||||||||    
T  22925226 tttacaaggaaaataagatattgacacaaaaattaaagcaatatagagaaattaaaaacataat 22925289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 30064568 - 30064505
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||||||||||| |  |||||||| ||||||||||| |||||||||||| ||||||||||||    
T  30064568 tttacaaagaaaatgatgtattgacatgaaaatcaaagcaatagagagaaagtaaaaacataat 30064505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 44649270 - 44649333
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||| ||||||||||| |||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  44649270 tttataaagaaaattaaatattgacacaaaaaccaaagtaaaagagagaaagtaaaaacataat 44649333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 194
Target Start/End: Complemental strand, 25888032 - 25887927
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaa 187  Q
    |||||| ||||||| ||| || |||||||||||||||| | |||||| |||||||| ||||||||||||   ||| ||||  |||||| ||||| |||||    
T  25888032 tttgaacaatcatt-gtgcgataacttttaggataaccataaatttaaaaagaaaaatagatattgacatagaaaccaaaacaatagatagaaaataaaa 25887934  T
Q  188 acataat 194  Q
    |||||||    
T  25887933 acataat 25887927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 17279676 - 17279733
Alignment:
Q  298 ggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||| |||||||||    
T  17279676 ggacggtgggattggtcccctcaaattagtcggtctttggatcggataccgagttttc 17279733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 27312294 - 27312354
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||||||||||||  | ||||||||||||| |||||||||    
T  27312294 agtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 31197732 - 31197792
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||||||||||||  | ||||||||||||| |||||||||    
T  31197732 agtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttttc 31197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 36352526 - 36352574
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  36352526 tttacaaagaaaatcatatattgacacgaaaatcaaagcaatagagaga 36352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 21217969 - 21217832
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||| ||| ||||||  ||||  |||||   ||||| | ||||| |||||| |||| |||    
T  21217969 ttcgattccctctgatgccaatttcggtgggctaagtccatacagagc-ttgctctagctttaaacgg-gccccccacaagtgggcggtgggattgatcc 21217872  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||   | ||||||||||||| |||||||||    
T  21217871 cctcggattagttgattcttggatcggataccgagttttc 21217832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 29861735 - 29861872
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| | | |||||| |||||  |||||   ||||| | ||||| |||||| |||| |||    
T  29861735 ttcgattccctctggtgccaatttcggtgggctaagtccatacagaac-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattgatcc 29861832  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  | ||| ||||||||| |||||||||    
T  29861833 cctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 344
Target Start/End: Original strand, 47541461 - 47541574
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtc 328  Q
    ||||| |||||||||||| ||||| ||| ||  ||||||||  ||||||||||||   ||||| | ||||||| |||||||||||||||| |||||||||    
T  47541461 tggtgtcaatttcggtggacaagttcatccag-gctttgctttggcttagaacgggc-cccccgcaagtggacagtggaattggtccccttagattagtc 47541558  T
Q  329 tgtccttggatcggat 344  Q
      ||||| ||||||||    
T  47541559 gatccttagatcggat 47541574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 27009424 - 27009561
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    |||||| || |||||||||||||||||||||| ||||||||||| ||||| |||| | |||  |||||   |||     |||||||||||| ||||||||    
T  27009424 ttcgatcccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccctgcaaagtggacggtgggattggtcc 27009522  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||||  | ||||||| ||||| ||||||||    
T  27009523 cctcaaattagtcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 33776491 - 33776441
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||| ||| |||||| ||||||||||| ||||||||||||||||    
T  33776491 aatttacaaaggaaaatagatagtgacacgaaaaccaaagtaatagagaga 33776441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 37845282 - 37845217
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagaga-gaaattaaaaacataa 193  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||| |||  ||| |||||||||||    
T  37845282 aatttataaagaaaagtagatattgacacgaaaatcaaaataataaagataaaagtaaaaacataa 37845217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 42814929 - 42814978
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  42814929 ttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt 42814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 674495 - 674447
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcgga 343  Q
    |||||||||||| |||| |||||||||||||||| |||||| |||||||    
T  674495 agtggacggtgggattgatcccctcagattagtcggtccttagatcgga 674447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 31398254 - 31398206
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||||||||    
T  31398254 tttacaaagaaaaatatgtattggcacgaaaatcaaagtaatagagaga 31398206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 41430093 - 41430141
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| | ||||||||||||||| ||||| ||||||||||    
T  41430093 tttacaaagaaaatcatatattgacacgaaaaccaaagcaatagagaga 41430141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 31712961 - 31712902
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||| |||||||||||| ||||||||  | ||||||||||||| ||||||||    
T  31712961 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 36173100 - 36173147
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagct 264  Q
    ||||||||| ||| |||||||||| |||||||||||||||||| ||||    
T  36173100 ttcgattccctcttgtgccaattttggtgggcaagtccatacagagct 36173147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 41018836 - 41018745
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||  ||||  ||||||||||||| || || | | |||||||||||||||  || |||| |||| |||| ||||||||||||||||    
T  41018836 tttgaataactatttaggtgacaacttttatgacaatcataaatttacaaagaaaaagaggtattaacacaaaaaccaaagtaatagagaga 41018745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 41863571 - 41863634
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||||| ||||| || ||||| ||| |||| ||||| |||| ||||||||||||||||||||    
T  41863571 tttacaaataaaatgaggtattggcacaaaaaacaaagcaataaagagaaattaaaaacataat 41863634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 1469192 - 1469226
Alignment:
Q  232 tgccaatttcggtgggcaagtccatacaaagcttt 266  Q
    ||||||||||| |||||||||||||||||||||||    
T  1469192 tgccaatttcgatgggcaagtccatacaaagcttt 1469226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 4292557 - 4292492
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacataat 194  Q
    |||||||||||||||| ||||||  || |||||||||| |||  ||||||||| ||||||||||||    
T  4292557 tttacaaagaaaattaaatattggtacaaaaatcaaagcaatagagagagaaagtaaaaacataat 4292492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 18883197 - 18883247
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||||||| ||||||| ||| ||| |||| |||||||||||    
T  18883197 aatttacaaagaaaattatatattgatacggaaagcaaaataatagagaga 18883247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 32849741 - 32849791
Alignment:
Q  303 gtggaattggtcccctcagattagtctgtccttggatcggataacgagttt 353  Q
    |||| |||||||||||||||||||||  | ||||||||||||| |||||||    
T  32849741 gtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 36533882 - 36533793
Alignment:
Q  106 tgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaataga--gagaaattaaaaacataa 193  Q
    ||||||||||| ||| |||| | | || | |||| ||| ||| |||| ||||||||||||||||||||||  |||||| |||||||||||    
T  36533882 tgacaacttttgggacaaccataatttgataaaggaaagtagttattaacacgaaaatcaaagtaatagagagagaaagtaaaaacataa 36533793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 38259186 - 38259128
Alignment:
Q  136 aaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    ||||||||  || ||||||||| |||||||||  |||||||||||| ||||||||||||    
T  38259186 aaagaaaaagaggtattgacacaaaaatcaaaacaatagagagaaagtaaaaacataat 38259128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 1284525 - 1284480
Alignment:
Q  149 tattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    ||||||||| ||||| |||| |||||||||||| ||||||||||||    
T  1284525 tattgacacaaaaattaaagcaatagagagaaagtaaaaacataat 1284480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 2103120 - 2103169
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| |||||    
T  2103120 ttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 2103169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 10091253 - 10091302
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| |||||    
T  10091253 ttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 10091302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 19880053 - 19880102
Alignment:
Q  130 atttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| |||||| ||||||| |||  |||||||||||||||    
T  19880053 atttacaaagaaaagtagatagtgacacggaaactaaagtaatagagaga 19880102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 36207167 - 36207102
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||||||||||||| |||||||| ||  |||| ||||  |||||||||||| ||||||| ||||    
T  36207167 aatttacaaagaaaataagatattggcagaaaaaccaaaacaatagagagaaactaaaaacgtaat 36207102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 354
Target Start/End: Original strand, 3851840 - 3851958
Alignment:
Q  235 caatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtctgtcc 333  Q
    |||||||||||||| ||||||||| | ||||| |||| |||||  |||||   ||||| | ||||| |||||| |||| ||||||| ||||||||  | |    
T  3851840 caatttcggtgggctaagtccatatagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattgatcccctcggattagtcgattc 3851937  T
Q  334 ttggatcggataacgagtttt 354  Q
    |||||||||||| ||||||||    
T  3851938 ttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 9363517 - 9363469
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  |||||| ||||||||||||||||| ||||||    
T  9363517 tttacaaagaaaagtatgtattgatacgaaaatcaaagtaatggagaga 9363469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 12007127 - 12007175
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||| ||||||| || ||| |||||||||| ||||||||||    
T  12007127 tttacaaagaaatttagatagtggcacaaaaatcaaagcaatagagaga 12007175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 30667721 - 30667784
Alignment:
Q  133 tacaaagaaaattagatattgacacgaaaatcaaagtaatagag--agaaattaaaaacataat 194  Q
    ||||||||||| |||| ||||  ||||||| |||||||||||||  ||||| ||||||||||||    
T  30667721 tacaaagaaaagtagacattggtacgaaaaccaaagtaatagagaaagaaagtaaaaacataat 30667784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 31445447 - 31445399
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| ||  |||||||| |||||||||| ||||||||||    
T  31445447 tttacaaagaaaatgagtgattgacacaaaaatcaaagcaatagagaga 31445399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 38939926 - 38939989
Alignment:
Q  136 aaagaaaattagatattgacacgaaaatcaaagtaatagagag--aaattaaaaacataatatg 197  Q
    |||||||| ||  ||| |||||||||||||||| |||||||||  ||| |||||||||||||||    
T  38939926 aaagaaaaataagtatagacacgaaaatcaaagcaatagagagataaagtaaaaacataatatg 38939989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 42584932 - 42584884
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| |  ||||||||||| |||||||| ||||||||||    
T  42584932 tttacaaagaaaatcatctattgacacgagaatcaaagcaatagagaga 42584884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 42913572 - 42913512
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||| |||||||||||| |||||||   | ||| ||||||||| |||||||||    
T  42913572 agtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 43171161 - 43171205
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaata 173  Q
    |||||| ||||||||||||| ||||||||||||| |||| |||||    
T  43171161 aatttataaagaaaattagaaattgacacgaaaaccaaaataata 43171205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 217 - 341
Target Start/End: Original strand, 16899564 - 16899687
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| || |||||||||   ||||  | |||||||||||  |||||||||    
T  16899564 ttcgattccctctggtgccaatttcggtgggccagtccatacaaagctttgctctggtttagaacgg-ggcccctgcaagtggacggtgagattggtccc 16899662  T
Q  317 ctcagattagtctgtccttggatcg 341  Q
    ||| |||||||| ||||||||||||    
T  16899663 ctcggattagtcggtccttggatcg 16899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 1486479 - 1486617
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccct-ctagtggacggtggaattggtcc 315  Q
    ||||||||| | |||||||||||||| |||| ||||||||||| |||||||||| | ||||||||||   |||||  | |||||||||||| || |||||    
T  1486479 ttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctctgacttagaacggggcccccccgcaagtggacggtgggatcggtcc 1486578  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| |||||||| |||||||||||||||| ||||||||    
T  1486579 cctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 9926282 - 9926146
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||| ||||||| |||||||||||| | ||||| | | ||| |||||| |||| ||||    
T  9926282 ttcgattccttctggtgtcaattttggtgggcaaatccatacaaagttttgctctggcttagaacgg-agcccccgcaactgggcggtgggattgatccc 9926184  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
     | ||||||||| |||||| ||||||||| ||||||||    
T  9926183 tttagattagtcggtccttcgatcggataccgagtttt 9926146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 25237125 - 25236990
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| || ||||||| | ||||||| ||   || || | |||||||||||||||||||||     
T  25237125 ttcgattccctctagtgccaatttcggtgggcaagtccatacagagttttgctctgacttagaatgg-tgcctccgcaagtggacggtggaattggtcct 25237027  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||| |||||| |||||||| |||||||||    
T  25237026 ctcatattagtcggtcctttgatcggat-acgagtttt 25236990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 4621373 - 4621236
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||  |||||  | ||||| |||||| ||||||||    
T  4621373 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccg-caagtgggcggtgggattggtcc 4621276  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  4621275 cctcggattagtcgattcttggatcggataccgagttttc 4621236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 355
Target Start/End: Original strand, 30677240 - 30677374
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||||| |||  |||||  || || | ||||| | ||||| |||||| |||||||||||    
T  30677240 gattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaatggga-cccccgcaagtgggcggtgggattggtcccct 30677337  T
Q  319 cagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||| || |||||| |||||| |||||||||    
T  30677338 cagattagtcggttcttggaccggatatcgagttttc 30677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 43367800 - 43367879
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaa 167  Q
    |||||| |||||||||||||||||||||||| | |||| | ||||||||||||||| || ||||| ||||||||||||||    
T  43367800 tttgaacaatcatttgtgtgacaacttttagaacaaccataaatttacaaagaaaaataaatatttacacgaaaatcaaa 43367879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 46607871 - 46608008
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| | |||  || ||   ||||| | ||||| |||||| |||| |||    
T  46607871 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaaaggcc-cccccgcaagtgggcggtgggattgatcc 46607968  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||| |||||||||||||||| |||||||||    
T  46607969 cctcggattagtcggtccttggatcggatatcgagttttc 46608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 24122084 - 24122220
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   | ||| | ||||| |||||| ||||||||    
T  24122084 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggctcccgcaagtgggcggtgggattggtcc 24122181  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  | ||||||||||||| ||||||||    
T  24122182 cctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 32729606 - 32729742
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||| |||||| |||||  || ||  | |||| | ||||| |||||| |||| ||||    
T  32729606 ttcgattccctatggtgccaatttcggtgggcaagtccatacagagc-ttgctctggctttaaatggggt-ccccgcaagtgggcggtgggattgatccc 32729703  T
Q  317 ctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||  |||||||| ||| |||||||||||| |||||||||    
T  32729704 cttggattagtcggtctttggatcggataccgagttttc 32729742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 16539672 - 16539735
Alignment:
Q  220 gattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacgg 283  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||    
T  16539672 gattccctctggtgccaattttggtgggcaagtccatacagagctttgcgctggcttagaacgg 16539735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 6949890 - 6949987
Alignment:
Q  99 atttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagta--atagagagaaattaaaaacataat 194  Q
    ||||||||||||||||||| |||||   | |||||| |||||||| |||||||||| ||||||| ||||| |  | ||||||||||||||||||||||    
T  6949890 atttgtgtgacaacttttacgataaatataaatttataaagaaaagtagatattgatacgaaaaacaaagcagtagagagagaaattaaaaacataat 6949987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 24674454 - 24674590
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  24674454 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggtcc 24674551  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||  |||||||  | ||||||||||||| ||| ||||    
T  24674552 cctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 27159223 - 27159283
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||| |||||||||||||||||||||  || |||||||||||| |||||||||    
T  27159223 agtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttttc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 7766863 - 7766726
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||| ||| |||||| | |||  |||||   ||||| | ||||| |||||| ||||||||    
T  7766863 ttcgattccctctggtgctaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacgg-ggcccccgcaagtgggcggtgggattggtcc 7766766  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | |||| |||||||| |||||||||    
T  7766765 cctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 15059538 - 15059401
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||  |||||  | ||||| |||||  ||||||||    
T  15059538 ttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccg-caagtgggcggtgagattggtcc 15059441  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  | ||||||||||||| |||||||||    
T  15059440 cctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 19034512 - 19034469
Alignment:
Q  227 tctggtgccaatttcggtgggcaagtccatacaaagctttgctc 270  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  19034512 tctggtgccaatttcggtgggcaagtccatacagagctttgctc 19034469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 23734177 - 23734315
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||| || ||||||  | |||  |||||   ||||| | ||||| ||||| |||||||||    
T  23734177 ttcgattccctctgatgccaatttcggtgggctaagtccatacagag-tttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcc 23734275  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||||  | |||| |||||||| | |||||||    
T  23734276 cctcagattagtcgattcttgaatcggataccaagttttc 23734315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 23741369 - 23741507
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||| || ||||||  | |||  |||||   ||||| | ||||| ||||| |||||||||    
T  23741369 ttcgattccctctgatgccaatttcggtgggctaagtccatacagag-tttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcc 23741467  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||||  | |||| |||||||| | |||||||    
T  23741468 cctcagattagtcgattcttgaatcggataccaagttttc 23741507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 9500491 - 9500355
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  ||||| | ||||| | ||||| |||||  |||||||     
T  9500491 ttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-agcccccacaagtgggcggtgagattggtct 9500394  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    | || ||||||||  | ||||||||||||| ||||||||    
T  9500393 cttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 35196313 - 35196251
Alignment:
Q  130 atttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacata 192  Q
    ||||| |||||||||||  |||||||| |||||||||| ||||||||||||| ||||||||||    
T  35196313 atttataaagaaaattaagtattgacaggaaaatcaaaataatagagagaaagtaaaaacata 35196251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 37351512 - 37351454
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttt 353  Q
    ||||| |||||| |||||||||||| |||||||| |||||||||||||||| |||||||    
T  37351512 agtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 17935830 - 17935965
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| || ||||||| |||||  |||||   ||||| | ||||| || ||| ||||||||    
T  17935830 ttcgattccttctagtgccaatttcggtgggctaagtccatacagag-tttgctctggctttaaacgg-ggcccccgcaagtgggcgatgggattggtcc 17935927  T
Q  316 cctcagattagtctgtccttggatcggataacgagttt 353  Q
     ||| ||||||||  | ||||||||||||| |||||||    
T  17935928 actcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 21433299 - 21433407
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaa 185  Q
    |||||| ||||||||||||||||||||| |||| |||| | |||||  |||||||| ||| ||| |||| | ||| ||||| |||  ||||||||| |||    
T  21433299 tttgaacaatcatttgtgtgacaactttcaggacaaccataaatttgtaaagaaaagtaggtatcgacatggaaaccaaagcaatagagagagaaaataa 21433398  T
Q  186 aaacataat 194  Q
    |||||||||    
T  21433399 aaacataat 21433407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 345
Target Start/End: Complemental strand, 1095139 - 1095013
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagcttt---gctccggcttagaacggaatccccctctagtggacggtggaattggt 313  Q
    ||||||| | |||||||||||||||||||||||||| |||||| ||||||   |||| ||||||||||||    |||| | ||||   ||||| ||||||    
T  1095139 ttcgatttcttctggtgccaatttcggtgggcaagtacatacagagctttgcagctctggcttagaacgg--ggccccgcaagtg---ggtgggattggt 1095045  T
Q  314 cccctcagattagtctgtccttggatcggata 345  Q
     ||||| |||||||| |||||| |||||||||    
T  1095044 tccctcggattagtcggtccttagatcggata 1095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 29706602 - 29706658
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaat 144  Q
    |||||| |||||||| |||||||||||||| ||||||| | ||||||||||||||||    
T  29706602 tttgaacaatcatttctgtgacaacttttaagataaccataaatttacaaagaaaat 29706658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 35138105 - 35138185
Alignment:
Q  272 ggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||||  ||||| | ||||| |||||| |||| | ||||| |||||||| |||||||||||||||| ||||||||    
T  35138105 ggcttagaacgga--cccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 43560377 - 43560286
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||| ||||||||| ||||||| ||||  || ||||   ||||||||| ||||| |||||| ||||||| ||| ||||||||||||||||    
T  43560377 tttgaacaatcatttgagtgacaatttttgtgacaaccactaatttacaaggaaaagtagatagtgacacggaaaacaaagtaatagagaga 43560286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 52135264 - 52135323
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||| ||||||||||||| ||||||| || |||||||||||||  |||||||    
T  52135264 agtggacggtgggattggtcccctcatattagtcggttcttggatcggatactgagtttt 52135323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 1138654 - 1138704
Alignment:
Q  231 gtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaac 281  Q
    |||||||||||||||| |||||||||||| |||||||||| | ||||||||    
T  1138654 gtgccaatttcggtggacaagtccatacagagctttgctctgacttagaac 1138704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 6257915 - 6257973
Alignment:
Q  136 aaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||||| ||| |||||||| |||||||||| ||||||| |||||||||||| |||||    
T  6257915 aaagaaaagtagttattgacatgaaaatcaaaataatagaaagaaattaaaaatataat 6257973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 33070734 - 33070684
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  33070734 aatttacaaaggaaagtagatagtgacacggaaatcaaagtaatagagaga 33070684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 7578470 - 7578519
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  7578470 ttcgattccctatggtgccaatttcggtgggctaagtccatacaaagctt 7578519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 44517860 - 44517945
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaata 173  Q
    |||||| || |||| |||||| ||||||| |||||||  | ||||||||||||||| ||  ||||||||| ||||||||| |||||    
T  44517860 tttgaacaaccattcgtgtgataacttttgggataactataaatttacaaagaaaaatatgtattgacacaaaaatcaaaataata 44517945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 46758498 - 46758431
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatg 197  Q
    ||||||||||| ||| || ||| ||||||| ||| |||||||||||||||||| |||||| ||||||||    
T  46758498 aatttacaaaggaaagta-atagtgacacggaaaccaaagtaatagagagaaagtaaaaaaataatatg 46758431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 327
Target Start/End: Original strand, 168262 - 168371
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| |||| |||||| ||| ||| || | |||  ||||| | | ||| ||||||| |||||| ||||||||    
T  168262 ttcgattccctctggtgccaatttcggtgggctaagttcatacagagc-ttgttctgactttaaacggga-ctcccgctagtggccggtgggattggtcc 168359  T
Q  316 cctcagattagt 327  Q
    |||| |||||||    
T  168360 cctcggattagt 168371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 32923419 - 32923312
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaa 187  Q
    |||||| ||||||||||| ||||| |||| ||| || | | |||||||||| |||| || |||||||| |  |||| |||  |||||||||||| |||||    
T  32923419 tttgaacaatcatttgtgagacaatttttgggacaatcataaatttacaaataaaaatatatattgactcagaaattaaaacaatagagagaaagtaaaa 32923320  T
Q  188 acataata 195  Q
    | ||||||    
T  32923319 atataata 32923312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 45859179 - 45859136
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccataca 259  Q
    ||||||||| |||||||||||||||||||||| |||||||||||    
T  45859179 ttcgattccctctggtgccaatttcggtgggctaagtccataca 45859136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 30973682 - 30973632
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaa 181  Q
    ||||||||||||| ||  ||||||||| || ||||||||||||||||||||    
T  30973682 tttacaaagaaaagtatgtattgacacaaatatcaaagtaatagagagaaa 30973632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 34778477 - 34778535
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttt 353  Q
    |||||||||||| |||||||||||  ||||||||  | ||||||||||||| |||||||    
T  34778477 agtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 276
Target Start/End: Original strand, 809301 - 809342
Alignment:
Q  235 caatttcggtgggcaagtccatacaaagctttgctccggctt 276  Q
    ||||||||||||||||||||||||||||| ||| || |||||    
T  809301 caatttcggtgggcaagtccatacaaagccttgatctggctt 809342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 7275586 - 7275674
Alignment:
Q  108 acaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagag--aaattaaaaacataat 194  Q
    |||| |||| ||| |||| | ||||||||||||||||||| |||| | | ||||| |||| ||||||||||  ||| ||||||||||||    
T  7275586 acaatttttgggacaaccataaatttacaaagaaaattaggtatttatatgaaaaccaaaataatagagagataaactaaaaacataat 7275674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 7946905 - 7946954
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| |||||    
T  7946905 ttcgattccctctggtgccaatttcggtgggctaagtctatacagagctt 7946954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 8077708 - 8077757
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| |||||    
T  8077708 ttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt 8077757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 20907385 - 20907344
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctc 270  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||    
T  20907385 tggtgccaatttcagtgggtaagtccatacagagctttgctc 20907344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 23232401 - 23232352
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| |||||    
T  23232401 ttcgattccctctggcgccaatttcggtgggctaagtccatacagagctt 23232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 24217051 - 24217092
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctc 270  Q
    ||||||||||||||||||| || ||||||||||| |||||||    
T  24217051 tggtgccaatttcggtgggtaaatccatacaaagatttgctc 24217092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 27533426 - 27533494
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacataatatg 197  Q
    |||||||||||||| || ||||||||  |||||||||  |||  ||||||||| |||||||||||||||    
T  27533426 tttacaaagaaaatgaggtattgacataaaaatcaaaacaataaagagagaaagtaaaaacataatatg 27533494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 36156024 - 36155975
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtggg-caagtccatacaaagctt 265  Q
    ||||||||| ||||||||||||||||||||| ||||||||| || |||||    
T  36156024 ttcgattccctctggtgccaatttcggtgggccaagtccatgcagagctt 36155975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 37351597 - 37351548
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||| |||||    
T  37351597 ttcgattccttctgatgccaatttcggtgggctaagtccatacagagctt 37351548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 37516654 - 37516589
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    ||||||||||| ||| |||||| ||||| ||||| ||||| |||||||||||| ||| || |||||    
T  37516654 aatttacaaaggaaagtagatagtgacatgaaaaccaaagcaatagagagaaagtaacaaaataat 37516589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 194
Target Start/End: Complemental strand, 39712551 - 39712443
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatag--agagaaattaa 185  Q
    |||||| || |||||| |||| |||||||  || ||||   ||||||||||| ||| |||||| ||||||| |||||||| ||||||  ||||||| |||    
T  39712551 tttgaacaaccatttgagtgataacttttgtgacaaccactaatttacaaaggaaagtagatagtgacacggaaatcaaaataatagaaagagaaagtaa 39712452  T
Q  186 aaacataat 194  Q
    ||| |||||    
T  39712451 aaaaataat 39712443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 46113538 - 46113493
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaa 261  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||    
T  46113538 ttcgattccctctggtaccaatttcggtgggctaagtccatacaaa 46113493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 50242441 - 50242392
Alignment:
Q  130 atttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| ||  ||||| |||||||| ||||||||||||||||    
T  50242441 atttacaaagaaaagtatgtattggcacgaaaaccaaagtaatagagaga 50242392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 6416083 - 6416043
Alignment:
Q  230 ggtgccaatttcggtgggcaagtccatacaaagctttgctc 270  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  6416083 ggtgccaactttggtgggctagtccatacaaagctttgctc 6416043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 18646914 - 18646973
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggctt 276  Q
    ||||||||  |||||||||||||||||||||| ||||| |||||||| ||||||| |||||    
T  18646914 ttcgattctctctggtgccaatttcggtgggctaagtctatacaaag-tttgctctggctt 18646973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 25672471 - 25672404
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatag--agagaaattaaaaacataatat 196  Q
    |||||||||||||| |  ||||||||| ||||  ||||||||||  ||||||| ||||||||||||||    
T  25672471 tttacaaagaaaataaagtattgacacaaaaactaaagtaatagaaagagaaaataaaaacataatat 25672404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 29246438 - 29246486
Alignment:
Q  146 agatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||| ||||| ||||| ||||||||||||||||| |||||| |||||    
T  29246438 agatatggacacaaaaataaaagtaatagagagaaaataaaaatataat 29246486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 29877427 - 29877379
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||||||  |||||||||||||| ||||  ||||||||||    
T  29877427 tttacaaagaaaattatgtattgacacgaaaaccaaaacaatagagaga 29877379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 33076249 - 33076201
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||||||  ||||| ||| || ||||||||||||||||||    
T  33076249 tttacaaagaaaattatgtattggcacaaatatcaaagtaatagagaga 33076201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 37454064 - 37454020
Alignment:
Q  151 ttgacacgaaaatcaaagtaatagagagaaattaaaaacataata 195  Q
    |||||||||||||||||| |||||| |||||| |||| |||||||    
T  37454064 ttgacacgaaaatcaaagcaatagaaagaaatcaaaagcataata 37454020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 46101026 - 46100958
Alignment:
Q  99 atttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaa 167  Q
    |||||| ||| ||||||||||| |||| |  |||||||||||||||||  ||||||||| |||| ||||    
T  46101026 atttgtatgataacttttaggacaaccatatatttacaaagaaaattatgtattgacacaaaaaccaaa 46100958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 352
Target Start/End: Original strand, 10377788 - 10377911
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtc 328  Q
    ||||||||||||||||||||||||||||||| |||||||||| | |||| |||||   ||||| | ||||| |||||| |||||||||||| || |||||    
T  10377788 tggtgccaatttcggtgggcaagtccatacatagctttgctctgacttaaaacggggccccccacaagtgggcggtggcattggtcccctcggagtagtc 10377887  T
Q  329 tgtccttggatcggataacgagtt 352  Q
     |||||||||| ||||| ||||||    
T  10377888 ggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 1344996 - 1345133
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||||| |||| |||||  |||||   ||||| | |||||||||||| ||||||||    
T  1344996 ttcgattccctctggtgccaatttcagtgggctaagtccatacaaagctt-gctctggctttaaacgggc-cccccgcaagtggacggtgggattggtcc 1345093  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||  ||||||||  | ||||||||||||| |||||||||    
T  1345094 ccttggattagtcgattcttggatcggataccgagttttc 1345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 34147407 - 34147544
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  34147407 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggc-cccccgcaagtgggcggtgggattggtcc 34147504  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  34147505 cctcggattagtcgattcttggatcggataccgagttttc 34147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 34160023 - 34160160
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  34160023 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggc-cccccgcaagtgggcggtgggattggtcc 34160120  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  34160121 cctcggattagtcgattcttggatcggataccgagttttc 34160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 17225738 - 17225863
Alignment:
Q  227 tctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattag 326  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||  | |||||||||    |||| | | ||| |||||| |||| || |||||||||||    
T  17225738 tctggtgccaatttcggcgggcaagtccatacagagctttgctctcgtttagaacgg--ggccccgcaaatgggcggtgggattgatctcctcagattag 17225835  T
Q  327 tctgtccttggatcggataacgagtttt 354  Q
    || |||||| ||||||||| ||||||||    
T  17225836 tcggtccttagatcggatatcgagtttt 17225863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 15360234 - 15360097
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | | ||| |||||| ||||||||    
T  15360234 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaaatgggcggtgggattggtcc 15360137  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  15360136 cctcggattagtcgattcttggatcggataccgagttttc 15360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 3222771 - 3222635
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| | |||  |||||    |||| | ||||| |||||| ||||||||    
T  3222771 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgtctttaaacgg--ggccccgcaagtgggcggtgggattggtcc 3222675  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  3222674 cctcggattagtcgattcttggatcggataccgagttttc 3222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 654282 - 654146
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   | ||| | ||||| |||||| ||||||||    
T  654282 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggctcccgcaagtgggcggtgggattggtcc 654185  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  |  |||||||||||| ||||||||    
T  654184 cctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 11448932 - 11449068
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  11448932 ttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 11449029  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  | |||| |||||||| ||||||||    
T  11449030 cctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 194
Target Start/End: Complemental strand, 8056888 - 8056780
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaa--tagagagaaattaa 185  Q
    |||||||||| |||||||||| || |||  |||||||| | |||||| ||||||||||| ||||||||| | |||| |||||||   ||||||||| |||    
T  8056888 tttgaataatgatttgtgtgataattttatggataaccataaatttataaagaaaattatatattgacaaggaaattaaagtaacggagagagaaagtaa 8056789  T
Q  186 aaacataat 194  Q
    |||||||||    
T  8056788 aaacataat 8056780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 352
Target Start/End: Complemental strand, 17149592 - 17149458
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||| |||||||| ||||||||| |||||||||||||| ||| |||||  |||||  || ||   ||||| | |||| ||||||| |||||||||    
T  17149592 ttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaatgg-ggcccccgcaagtgaacggtgggattggtccc 17149494  T
Q  317 ctcagattagtctgtccttggatcggataacgagtt 352  Q
    |||  ||||||| ||||||| ||| |||| ||||||    
T  17149493 ctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 5360207 - 5360071
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||  ||||||||||||||||| ||||||||||| ||||| |||| | |||  ||||||| ||||| | ||||| |||||| ||||||||    
T  5360207 ttcgattccctctaatgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggaa-cccccacaagtgggcggtgggattggtcc 5360110  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||  |||||||  | ||| ||||||||| ||||||||    
T  5360109 cctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 277120 - 277056
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagag--aaattaaaaacataa 193  Q
    |||||||||||||| | |||||||||| |||||||||| |||||||||  |||||||||||||||    
T  277120 tttacaaagaaaatgatatattgacacaaaaatcaaagcaatagagagaaaaattaaaaacataa 277056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 9208313 - 9208449
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||| |||||  |||||  || ||   ||||| | ||||| |||||| ||||||| |    
T  9208313 ttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgctttggctttaaatgg-ggcccccgcaagtgggcggtgggattggtctc 9208411  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||| |||||  | ||||||||  ||| ||||||||    
T  9208412 ctcagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 3853249 - 3853297
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  3853249 tttacaaagaaaatgagatattgacacaaaaatcaaagcaatagagaga 3853297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 12390486 - 12390596
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  ||| |   ||||| | ||||| |||||| ||||||||    
T  12390486 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacag-ggcccccgcaagtgggcggtgggattggtcc 12390583  T
Q  316 cctcagattagtc 328  Q
    |||| ||||||||    
T  12390584 cctcggattagtc 12390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 25127729 - 25127820
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||| || |||||||| ||||| || | ||| |||| | ||||||||||||||| ||| |||||||||| ||| ||||| ||||||||||    
T  25127729 tttgaacaaccatttgtgcgacaaattctgggacaaccataaatttacaaagaaaagtaggtattgacacggaaaccaaagcaatagagaga 25127820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 3552054 - 3552160
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaa 187  Q
    |||||| || ||||||  ||| |||||||  ||||| | | |||||||||||||||| || ||||||||| | || |||||||| ||||||||| |||||    
T  3552054 tttgaacaaccatttggatgataacttttgtgataatcataaatttacaaagaaaataaggtattgacacaataagcaaagtaacagagagaaagtaaaa 3552153  T
Q  188 acataat 194  Q
    | |||||    
T  3552154 atataat 3552160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 9690774 - 9690638
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||| | ||| ||| |||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||| | | |||||||||||| ||||||||    
T  9690774 ttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-ccctcacaagtggacggtgggattggtcc 9690677  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
     ||| ||||||||  | ||||||||||||| ||||||||    
T  9690676 tctcggattagtcgattcttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 354
Target Start/End: Original strand, 33499539 - 33499672
Alignment:
Q  220 gattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctc 319  Q
    |||||| ||||||| |||||||||||||| |||||||||||| |||||||  |||||  || ||   || || | ||||| |||||| ||||||||||||    
T  33499539 gattccctctggtgtcaatttcggtgggctagtccatacaaatctttgctttggctttaaatgg-gccctccacaagtgggcggtgggattggtcccctc 33499637  T
Q  320 agattagtctgtccttggatcggataacgagtttt 354  Q
     |||||||| ||   |||| |||||| ||||||||    
T  33499638 ggattagtcagttgatggaccggataccgagtttt 33499672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 345
Target Start/End: Original strand, 3907602 - 3907727
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    ||||||||  |||||||||||||| |  ||||||||||||||||  |||||||| || |||||||||   ||||| | | |||||||||  |||| |||     
T  3907602 ttcgattctctctggtgccaattttgc-gggcaagtccatacaagactttgctctggtttagaacgg--gcccccgcaaatggacggtgagattgatcct 3907698  T
Q  317 ctcagattagtctgtccttggatcggata 345  Q
    ||||||||||||  |||||||||| ||||    
T  3907699 ctcagattagtcgttccttggatcagata 3907727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 9239036 - 9239171
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||  ||||||||| | ||||| |||  |||||  || ||   ||||| | ||||| |||||| ||||||||    
T  9239036 ttcgattccctctggtgccaatttcggtgggttaagtccatatagagctt-gctttggctttaaatgggg-cccccgcaagtgggcggtgggattggtcc 9239133  T
Q  316 cctcagattagtctgtccttggatcggataacgagttt 353  Q
    |||| ||||||||  | ||||||||||||| |||||||    
T  9239134 cctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 30956202 - 30956153
Alignment:
Q  130 atttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||||||||||||| |||||| ||||||  ||||||||||    
T  30956202 atttacaaagaaaattagatattggcacgaagatcaaatcaatagagaga 30956153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 11840963 - 11841011
Alignment:
Q  218 tcgattccatctggtgccaatttcggtggg-caagtccatacaaagctt 265  Q
    |||||||| |||||||||||||||||||||  |||||||||||||||||    
T  11840963 tcgattccctctggtgccaatttcggtgggttaagtccatacaaagctt 11841011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 21148646 - 21148510
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| |||||||||||| ||||| ||||||||||| ||||| |||| | |||  |||||    |||| | ||||| |||||| ||||||||    
T  21148646 ttcgattccctctagtgccaatttcgatgggctaagtccatacagagctt-gctctgactttaaacgggg--ccccgcaagtgggcggtgggattggtcc 21148550  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | |||| |||||||| |||||||||    
T  21148549 cctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 27613004 - 27612960
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaataga 175  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||    
T  27613004 tttacaaagaaaaatatgtattgacacgaaaatcaaagtaataga 27612960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 10826675 - 10826584
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||| || |||||| |||| |||||||  || ||||   ||||||||||||||| ||||||  |||||| ||| ||||||||||||||||    
T  10826675 tttgaacaaccatttgagtgataacttttgtgacaaccactaatttacaaagaaaagtagatagagacacggaaaacaaagtaatagagaga 10826584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 21982444 - 21982320
Alignment:
Q  229 tggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagt 327  Q
    ||||||||||||| |||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||| || |||||||    
T  21982444 tggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtccc-tcggattagt 21982348  T
Q  328 ctgtccttggatcggataacgagttttc 355  Q
    |  | ||||||||||||| |||||||||    
T  21982347 cgattcttggatcggataccgagttttc 21982320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 4820496 - 4820446
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaa 181  Q
    |||||||||||||| ||  |||||||| |||||||||| ||||||||||||    
T  4820496 tttacaaagaaaatgaggcattgacacaaaaatcaaagcaatagagagaaa 4820446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 10335682 - 10335632
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||| ||| |||||| ||||||| ||| ||||||||||||||||    
T  10335682 aatttacaaaggaaagtagatagtgacacggaaaccaaagtaatagagaga 10335632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 16336956 - 16336890
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatg 197  Q
    ||||||||||||| ||  | |||||||||||| |||||||||||||||||  ||||||  |||||||    
T  16336956 tttacaaagaaaagtatgtgttgacacgaaaagcaaagtaatagagagaatgtaaaaatgtaatatg 16336890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 26595478 - 26595413
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacataat 194  Q
    |||||||||||||| || ||||||||| |||| ||||| |||  ||||||||| ||||||||||||    
T  26595478 tttacaaagaaaatgaggtattgacacaaaaaccaaagcaatagagagagaaagtaaaaacataat 26595413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 30945944 - 30945907
Alignment:
Q  130 atttacaaagaaaattagatattgacacgaaaatcaaa 167  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  30945944 atttacaaagaaaagtagatattggcacgaaaatcaaa 30945907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 6383998 - 6383891
Alignment:
Q  230 ggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggt-ggaattggtcccctcagattagtc 328  Q
    |||||||||||| |||||| |||||||| | |||||||||  |||||  || || | ||||| | ||||||| || ||| |||| |||||||||||||||    
T  6383998 ggtgccaatttcagtgggctagtccataaagagctttgctttggctttaaatggga-cccccacaagtggacagtgggatttggacccctcagattagtc 6383900  T
Q  329 tgtccttgg 337  Q
     ||||||||    
T  6383899 agtccttgg 6383891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 9844068 - 9844136
Alignment:
Q  287 ccccctctagtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||||| ||||| |||||  ||||||||| || ||||||||  | ||||||||||||| |||||||||    
T  9844068 ccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttc 9844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 17420941 - 17420989
Alignment:
Q  231 gtgccaatttcggtgggcaagtccatacaaagctttgctccggcttaga 279  Q
    ||||||||||||||||| |||| |||||| ||||||||||  |||||||    
T  17420941 gtgccaatttcggtgggtaagttcatacatagctttgctctagcttaga 17420989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 28632639 - 28632528
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaataga--gagaaattaa 185  Q
    |||||| ||||||||| |||||| |||||  |||||||   ||||||||||| ||| || ||| ||| ||| |||  |||||||||||  |||||| |||    
T  28632639 tttgaacaatcatttgagtgacaccttttgtgataaccactaatttacaaaggaaagtaaatagtgatacggaaactaaagtaatagagagagaaagtaa 28632540  T
Q  186 aaacataatatg 197  Q
    ||| ||||||||    
T  28632539 aaaaataatatg 28632528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 31869197 - 31869149
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||| ||| ||  ||||| |||||||||||||||||||||||||    
T  31869197 tttacaaaggaaaatatgtattggcacgaaaatcaaagtaatagagaga 31869149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 29278 - 29143
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtccc 316  Q
    |||||||||  ||| ||||| ||||||| || ||||||||||| |||||||||| |||||| || |||  ||||| | | ||||| |||| |||||||||    
T  29278 ttcgattcccgctgatgccattttcggtcggtaagtccatacagagctttgctctggcttaaaatgga--cccccgcaaatggacagtgggattggtccc 29181  T
Q  317 ctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  29180 ctcagattagtcagtccttggatcggataccgagtttt 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 220 - 345
Target Start/End: Complemental strand, 4252529 - 4252405
Alignment:
Q  220 gattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctc 319  Q
    |||||| ||||||||||||||| |||  ||||||||||||||||||| ||| || |||||||||   ||||| | |||||||||||| ||||||||||||    
T  4252529 gattccctctggtgccaatttcagtgatcaagtccatacaaagctttactctggtttagaacgg-cccccccacaagtggacggtgggattggtcccctc 4252431  T
Q  320 agattagtctgtccttggatcggata 345  Q
     ||||||||  |||||||||||||||    
T  4252430 ggattagtcgatccttggatcggata 4252405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 15566635 - 15566499
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  15566635 ttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggg--cccccgcaagtgggcggtgggattggtcc 15566539  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||||||||||  | ||||||||||||| |||||||||    
T  15566538 cctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 48977449 - 48977586
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||  ||||||||||| ||||| |||| |||||  |||||   ||||  | ||||| |||||| ||||||||    
T  48977449 ttcgattccttctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacgggg-cccctgcaagtgggcggtgggattggtcc 48977546  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| |||||||| |||||||||||||||| |||||||||    
T  48977547 cctcggattagtcggtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 355
Target Start/End: Complemental strand, 10083952 - 10083818
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| ||| |||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | |||||||||||| |||||||||||    
T  10083952 gattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccacaagtggacggtgggattggtcccct 10083855  T
Q  319 cagattagtctgtccttggatcggataacgagttttc 355  Q
    | ||||||||  | ||||||||||||| |||||||||    
T  10083854 cggattagtcgattcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 355
Target Start/End: Complemental strand, 10190875 - 10190741
Alignment:
Q  220 gattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccct 318  Q
    |||||| ||| |||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | |||||||||||| |||||||||||    
T  10190875 gattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtggacggtgggattggtcccct 10190778  T
Q  319 cagattagtctgtccttggatcggataacgagttttc 355  Q
    | ||||||||  | ||||||||||||| |||||||||    
T  10190777 cggattagtcgattcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 49258398 - 49258262
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  49258398 ttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccacaagtgggcggtgggattggtcc 49258301  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  | ||||||||||||| ||||||||    
T  49258300 cctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 35299791 - 35299880
Alignment:
Q  106 tgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataata 195  Q
    |||||| |||||||| |||  |||||||| ||||||||| || ||||||||| |||||||||| |||||||||||| |||||| ||||||    
T  35299791 tgacaatttttaggacaacaatgaatttataaagaaaatgaggtattgacacaaaaatcaaagcaatagagagaaaataaaaatataata 35299880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 8456286 - 8456149
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| | |||| ||||||||    
T  8456286 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcagtgggattggtcc 8456189  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | |||| |||||||| |||||||||    
T  8456188 cctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 30807289 - 30807152
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||| | |||||| |    
T  30807289 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcggtaggattggt-c 30807192  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  30807191 cctcggattagtcgattcttggatcggataccgagttttc 30807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 40133585 - 40133448
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  40133585 ttcgattccctctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 40133488  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  | ||||||||||||| |||||||||    
T  40133487 cctcgaattagtcgattcttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 345
Target Start/End: Original strand, 26158891 - 26158999
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtc 328  Q
    ||||||||||||||||||| |||||||||||       |||| |||||||||||||  ||||| | ||||| |||||| |||| ||||||| ||||||||    
T  26158891 tggtgccaatttcggtgggtaagtccataca-------gctctggcttagaacggag-cccccgcaagtgggcggtgggattgatcccctcggattagtc 26158982  T
Q  329 tgtccttggatcggata 345  Q
     ||||||||||||||||    
T  26158983 ggtccttggatcggata 26158999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 35492972 - 35493108
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  35492972 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggtcc 35493069  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  | ||||||| | ||| ||||||||    
T  35493070 cctcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 46965825 - 46965891
Alignment:
Q  96 atcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaa 162  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||| ||| ||||||||| ||||    
T  46965825 atcatttgtgtgacaacttttaggacaaccataaatttacaaagaaaagtaggtattgacacaaaaa 46965891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 32587738 - 32587802
Alignment:
Q  130 atttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    ||||||||||||||| | |||||| ||| |||| ||||| |||||||||||||||||||||||||    
T  32587738 atttacaaagaaaatgaaatattggcacaaaaaccaaagcaatagagagaaattaaaaacataat 32587802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 45272552 - 45272415
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||  ||| |||||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  45272552 ttcgattccctctggtgccaatttcggtgggctaagtccatacggagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggtcc 45272455  T
Q  316 cctcagattagtctgtc-cttggatcggataacgagttttc 355  Q
    |||| ||||||| || | ||||||||||||| |||||||||    
T  45272454 cctcggattagt-tgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 46965999 - 46966106
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatag--agagaaattaa 185  Q
    |||||| || ||||||||||||||||||| ||| || | | ||||||||||||||  ||||||| |||||||||| ||||  |||||  ||||||| |||    
T  46965999 tttgaacaaccatttgtgtgacaacttttcggacaatcataaatttacaaagaaagatagatatcgacacgaaaaccaaaacaatagatagagaaagtaa 46966098  T
Q  186 aaacataa 193  Q
    ||||||||    
T  46966099 aaacataa 46966106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 53424312 - 53424176
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| | |||||||||||||||||||| ||||||||||| || ||||||  |||||  |||||   ||||| | ||||  |||||| ||||||||    
T  53424312 ttcgattccctttggtgccaatttcggtgggctaagtccatacagag-tttgctatggctttaaacggg--cccccgcaagtgagcggtgggattggtcc 53424216  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  53424215 cctcggattagtcgattcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 27511885 - 27511807
Alignment:
Q  99 atttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagag 178  Q
    |||||||||||||||||| ||| |||| | ||||||||||||||| |||||||||||||| ||| ||||  |||||||||    
T  27511885 atttgtgtgacaactttt-ggacaaccataaatttacaaagaaaagtagatattgacacggaaaccaaaacaatagagag 27511807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 46576409 - 46576546
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||| | ||||||||    
T  46576409 ttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtcggattggtcc 46576506  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||  ||||||||  | ||||||||||||| |||||||||    
T  46576507 ccttggattagtcgattcttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 50731296 - 50731237
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||| |||||||||||||||||||||  ||||||||||||||| ||||||||    
T  50731296 agtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 50781558 - 50781617
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||| |||||||||||||||||||||  ||||||||||||||| ||||||||    
T  50781558 agtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 52821771 - 52821636
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||||||||||||||| || ||||||||||| ||||| |||| |||||  |||||    ||||   ||||| |||||| ||||||||    
T  52821771 ttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacgggg--ccccgtaagtgggcggtgggattggtcc 52821675  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  | ||||||||||||| ||||||||    
T  52821674 cctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 18177023 - 18176887
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||| | ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  18177023 ttcgattccctctggtgccaatttcggtggactaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggtcc 18176926  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    | || ||||||||  | |||||||||||||  |||||||    
T  18176925 catcggattagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 21363004 - 21363140
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||||| ||||| |||| |||||  ||||||  ||||| | ||||| |||||| |||||| |    
T  21363004 ttcgattccctctggtgtcaatttcggtaggctaagtccatacagagctt-gctctggctttaaacggag-cccccgcaagtgggcggtgggattggttc 21363101  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||| ||  | ||||||||||||| ||||||||    
T  21363102 cctcggattaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 23770633 - 23770735
Alignment:
Q  77 gagatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagag 176  Q
    ||||||| || |||||| || |||||| ||||||||||||  || ||||   |||||| |||| ||| |||||||||||||| ||| |||||||||||||    
T  23770633 gagatgtgttatttgaacaaccatttgagtgacaacttttgtgacaaccactaatttataaaggaaagtagatattgacacggaaaccaaagtaatagag 23770732  T
Q  177 aga 179  Q
    |||    
T  23770733 aga 23770735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 1242036 - 1242134
Alignment:
Q  219 cgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccc 317  Q
    ||||||| |||||||||||||| ||||||| ||||||||||| |||||||||| |||||  |||||  |  ||| | ||||| |||||||||||||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggt--cccgcaagtgggcggtggaattggtcccc 1242133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 46965897 - 46965982
Alignment:
Q  77 gagatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaa 162  Q
    ||||||| || |||||| ||  |||||||||||||||||||||| || | | ||||||||||||||| ||| ||||||||| ||||    
T  46965897 gagatgtgttatttgaacaacaatttgtgtgacaacttttaggacaatcataaatttacaaagaaaagtaggtattgacacaaaaa 46965982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 1178244 - 1178292
Alignment:
Q  228 ctggtgccaatttcggtgggcaagtccatacaaagctttgctccggctt 276  Q
    |||||||||||||||||||||||||||||||| | |||||||| |||||    
T  1178244 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 1178292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 12762579 - 12762679
Alignment:
Q  79 gatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagag 178  Q
    ||||| || |||||| ||||||||   |||||| || | ||| |||| | ||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  12762579 gatgtgttatttgaacaatcatttacatgacaatttatgggacaaccataaatttacaaagaaaaatagttattgacacaaaaatcaaagtaataaagag 12762678  T
Q  179 a 179  Q
    |    
T  12762679 a 12762679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 8097415 - 8097278
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| |||| ||||||| ||||| ||||||||||| ||| | |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  8097415 ttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcat-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 8097318  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  8097317 cctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 25289850 - 25289714
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||||| |||||| |    
T  25289850 ttcgattccctctagtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggt-c 25289754  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  | ||||||||||||| |||||||||    
T  25289753 cctcgaattagtcgattcttggatcggataccgagttttc 25289714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 26174174 - 26174311
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||| | |||||||||||||||||||||  ||||||||||| ||||| |||| |||||  ||  |   ||||| | ||||| |||||| ||||||||    
T  26174174 ttcgatttcctctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaataggg-cccccgcaagtgggcggtgggattggtcc 26174271  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  26174272 cctcggattagtcgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 44413864 - 44413927
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    |||||||||||||| |||||||||||| |||| ||||| |||||||||||  |||||| |||||    
T  44413864 tttacaaagaaaatgagatattgacacaaaaaccaaagcaatagagagaaggtaaaaagataat 44413927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 45529890 - 45529754
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||| |||||||||| ||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  45529890 ttcgattccctctggagccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggc-cccccgcaagtgggcggtgggattggtcc 45529793  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||| ||||||||| |||||||||    
T  45529792 cctcggattagtcgattctt-gatcggataccgagttttc 45529754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 53234046 - 53233910
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| ||| |||||| ||||   |||||   ||||| | ||||| |||||| ||||||||    
T  53234046 ttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctctaaacgg-ggcccccgcaagtgggcggtgggattggtcc 53233949  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||| ||||||||| |||||||||    
T  53233948 cctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 39041988 - 39041852
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  |||||||||||||||||||||| |||||||| || ||||| |||| |||||  |||||   ||||| | |||||  ||||| ||||||||    
T  39041988 ttcgattctctctggtgccaatttcggtgggctaagtccatgcagagctt-gctctggctttaaacgggg-cccccgcaagtgggtggtgggattggtcc 39041891  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
     ||| ||||||||  | ||||||||||||| ||||||||    
T  39041890 actcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 26108353 - 26108402
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  26108353 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 26108402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 44962127 - 44962192
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatat 196  Q
    |||||||| |||| ||  |||||| |||||||||||||||||||| ||||| |||||| |||||||    
T  44962127 tttacaaaaaaaaatatgtattgatacgaaaatcaaagtaatagatagaaaataaaaatataatat 44962192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 45693926 - 45693817
Alignment:
Q  79 gatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagag 178  Q
    ||||| || |||||| || |||||| |||| || ||||  || |||| | ||||||||||  ||| |||||| ||||||| ||| |||||||||||||||    
T  45693926 gatgtgttatttgaacaaccatttgagtgataatttttgtgacaaccattaatttacaaaagaaagtagatagtgacacggaaaacaaagtaatagagag 45693827  T
Q  179 aaattaaaaa 188  Q
    ||| ||||||    
T  45693826 aaaataaaaa 45693817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 7203211 - 7203255
Alignment:
Q  226 atctggtgccaatttcggtgggcaagtccatacaaagctttgctc 270  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||    
T  7203211 atctggtgccaatttcggtaggcaagtccatatagagctttgctc 7203255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 9311213 - 9311102
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaata--gagagaaattaa 185  Q
    |||||| ||||||||||   ||||||| | ||| |||| |  ||||| |||||||| ||| |||||||||||||| ||||  ||||  |||||||| |||    
T  9311213 tttgaacaatcatttgttgaacaacttatgggacaaccatatatttaaaaagaaaagtaggtattgacacgaaaaccaaaacaatagggagagaaagtaa 9311114  T
Q  186 aaacataatatg 197  Q
    ||||||||||||    
T  9311113 aaacataatatg 9311102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 16479762 - 16479714
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||||||||    
T  16479762 tttacaaagaaaaatatgtattggcacgaaaatcaaagtaatagagaga 16479714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 34592194 - 34592146
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  ||||||||||||||||||||||||| |||||    
T  34592194 tttacaaagaaaagtatgtattgacacgaaaatcaaagtaataaagaga 34592146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 46574388 - 46574324
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataa 193  Q
    |||||| |||||||| ||| |||||||||| ||| ||||  |||||||||||| |||||||||||    
T  46574388 aatttagaaagaaaagtaggtattgacacggaaaccaaaacaatagagagaaagtaaaaacataa 46574324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 53288847 - 53288799
Alignment:
Q  218 tcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    |||||||| |||||||||||||||||||| | |||||||||||||||||    
T  53288847 tcgattccctctggtgccaatttcggtggactaagtccatacaaagctt 53288799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 53848493 - 53848433
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||||||||||| ||||||||  | ||||||||||||| |||||||||    
T  53848493 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 4048088 - 4048147
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||| |||||||||||| |||||||   | ||||||||||||| ||||||||    
T  4048088 agtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 24407399 - 24407458
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||| |||||||||||| ||||||||  | ||||||||||||| ||||||||    
T  24407399 agtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 30257685 - 30257822
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| | |||||||||||||| ||| | ||||||||||| ||||| |||| |||||  || ||   ||||| | ||||| |||||| ||||||||    
T  30257685 ttcgattccctttggtgccaatttcgatggactaagtccatacagagctt-gctctggctttaaatgggg-cccccgcaagtgggcggtggcattggtcc 30257782  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| ||| |||||    
T  30257783 cctcggattagtcgattcttggatcggataccgaattttc 30257822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 37035424 - 37035515
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||| |||||||||  ||| |||||||  || ||||   ||||||||||| ||| |||||| ||||||| ||| ||||||||||||||||    
T  37035424 tttgaacaatcatttgaatgataacttttgtgacaaccactaatttacaaaggaaagtagatagtgacacggaaaccaaagtaatagagaga 37035515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 3518525 - 3518595
Alignment:
Q  107 gacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagaga 177  Q
    ||||| ||||||||||| | | |||||  ||||||||| || ||||||||| |||||||||| ||||||||    
T  3518525 gacaatttttaggataatcataaatttgtaaagaaaataaggtattgacacaaaaatcaaagcaatagaga 3518595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 341
Target Start/End: Original strand, 30908495 - 30908537
Alignment:
Q  299 gacggtggaattggtcccctcagattagtctgtccttggatcg 341  Q
    |||||||| |||||||||||||||||||||  |||||||||||    
T  30908495 gacggtgggattggtcccctcagattagtcattccttggatcg 30908537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 34492711 - 34492575
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||| ||||||||||| ||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  34492711 ttcgattccctctgctgccaatttcgttgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggtcc 34492614  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
      ||||||||||   | |||||||| |||| ||||||||    
T  34492613 attcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 54007616 - 54007534
Alignment:
Q  106 tgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaa 188  Q
    ||||||||| || || |||| | |||||| |||||||| ||||||||||||| ||||| |||  |||||||| ||| ||||||    
T  54007616 tgacaacttataagacaaccataaatttataaagaaaaatagatattgacacaaaaataaaaagaatagagataaaataaaaa 54007534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 55371353 - 55371303
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggata 345  Q
    ||||| |||||| |||||||||||| ||||||||  |||||||||||||||    
T  55371353 agtgggcggtgggattggtcccctcggattagtcgatccttggatcggata 55371303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 32094809 - 32094756
Alignment:
Q  302 ggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||||| |||| ||||||| || ||||||||||||| |||||||||    
T  32094809 ggtgggattggtcctctcatattagtcggttcttggatcggataccgagttttc 32094756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 33256492 - 33256435
Alignment:
Q  77 gagatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaattta 134  Q
    ||||||| || |||||| || ||||||||||||||||||||||| |||| | ||||||    
T  33256492 gagatgtgttatttgaacaaccatttgtgtgacaacttttaggacaaccataaattta 33256435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 40940886 - 40940935
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| |||||||||||||||||||| | ||||||||||| |||||    
T  40940886 ttcgattccctctggtgccaatttcggtggactaagtccatacagagctt 40940935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 50876304 - 50876372
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatag--agagaaattaaaaacataatatg 197  Q
    |||||||||||||  || |||||| || |||||||||| |||||  ||||||| |||||||||||||||    
T  50876304 tttacaaagaaaaagaggtattgatacaaaaatcaaagcaatagaaagagaaaataaaaacataatatg 50876372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 328
Target Start/End: Original strand, 51532927 - 51532960
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtc 328  Q
    |||||||||||| |||||||||||||||||||||    
T  51532927 agtggacggtgggattggtcccctcagattagtc 51532960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 2511433 - 2511385
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagct 264  Q
    ||||||||| |||||||||||||||||||||| |||| |||||| ||||    
T  2511433 ttcgattccctctggtgccaatttcggtgggctaagttcatacagagct 2511385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 5114207 - 5114159
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| || || |||||| |||||||||| ||||||||||    
T  5114207 tttacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagagaga 5114159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 6127593 - 6127640
Alignment:
Q  297 tggacggtggaattggtcccctcagattagtctgtccttggatcggata 345  Q
    |||||||||| ||||||||||||| ||||||| ||||||| ||||||||    
T  6127593 tggacggtgggattggtcccctcaaattagtc-gtccttgtatcggata 6127640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 11630692 - 11630756
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataata 195  Q
    |||||||||||||| |  |||||| |  |||| |||||||||||||||||| |||||| ||||||    
T  11630692 tttacaaagaaaatgaagtattgatataaaaaccaaagtaatagagagaaagtaaaaatataata 11630756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 24165774 - 24165714
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||| ||||||| ||||||||  | ||||||||||||| |||||||||    
T  24165774 agtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 29030716 - 29030796
Alignment:
Q  99 atttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||| ||||||||||||  |||| ||   ||||||||||| ||| |||||| ||||||| |||  |||||||||||||||    
T  29030716 atttgagtgacaacttttgtgatagccactaatttacaaaggaaagtagatagtgacacggaaaataaagtaatagagaga 29030796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 33793590 - 33793630
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtcctt 335  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  33793590 agtggacggtgggattggtcccctcggattagtcagtcctt 33793630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 34627780 - 34627891
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagta--atagagagaaattaa 185  Q
    |||||| ||| |||| | ||| ||||| || || |||| | |||||||||||||||| ||||||| | || |||||||||| |  | ||||||||| |||    
T  34627780 tttgaacaattatttttatgataacttataagacaaccataaatttacaaagaaaataagatatttatacaaaaatcaaagcagtaaagagagaaagtaa 34627879  T
Q  186 aaacataatatg 197  Q
    ||| ||||||||    
T  34627880 aaatataatatg 34627891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 41309246 - 41309198
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| || || |||||| |||||||||| ||||||||||    
T  41309246 tttacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagagaga 41309198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 45186493 - 45186541
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||| ||||| ||  |||||||| ||||||||||||||||||||||    
T  45186493 tttacaacgaaaagtatgtattgacaagaaaatcaaagtaatagagaga 45186541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 48287801 - 48287753
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  ||||  |||||||||||||||||||||||||    
T  48287801 tttacaaagaaaaatatgtattagcacgaaaatcaaagtaatagagaga 48287753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 50314736 - 50314689
Alignment:
Q  149 tattgacacgaaaatcaaagtaataga--gagaaattaaaaacataat 194  Q
    ||||||||| |||||||||||||||||  |||||| ||||||||||||    
T  50314736 tattgacacaaaaatcaaagtaatagagagagaaagtaaaaacataat 50314689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 51390971 - 51390923
Alignment:
Q  221 attccatctggtgccaatttcggtgggcaagtccatacaaagctttgct 269  Q
    ||||| ||| |||||||||||||| | |||| |||||||||||||||||    
T  51390971 attccctcttgtgccaatttcggtagacaagcccatacaaagctttgct 51390923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 20566411 - 20566547
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaa-gtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||| |||||  ||||||  ||||| | ||||| || ||| ||||||||    
T  20566411 ttcgattccctctggtgccaatttcggtgggcaaagtccatacagagctt-gctctggctttaaacggag-cccccgcaagtgggcgctgggattggtcc 20566508  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||||  | ||||||||||||| ||||||||    
T  20566509 cctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 34844894 - 34844757
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  34844894 ttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 34844797  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  34844796 cctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 40058988 - 40058851
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  40058988 ttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 40058891  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  40058890 cctcggattagtcgattcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 34723860 - 34723996
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||  |||||   ||||| | |||||  ||||| ||||||||    
T  34723860 ttcgattccctctggtgccaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacgggg-cccccgcaagtgggtggtgggattggtcc 34723957  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
     ||| ||||||||  | ||||||||||||| ||||||||    
T  34723958 tctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 52983680 - 52983815
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  52983680 ttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 52983777  T
Q  316 cctcagattagtctgtccttggatcggataacgagttt 353  Q
    |||| ||||||||  | ||||||||||||| |||||||    
T  52983778 cctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 22630322 - 22630258
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaac 281  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||    
T  22630322 ttcgattccctctggtgccaattttggtgggcaagtccatacaaagttttgctttggcttagaac 22630258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 5609338 - 5609201
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| ||||| |||| |||||  || ||   ||||| | |||||||||||| |||| |||    
T  5609338 ttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatgggg-cccccgcaagtggacggtgggattgatcc 5609241  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  5609240 cctcggattagtcgattcttggatcggataccgagttttc 5609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 27528931 - 27528794
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||   ||||   ||||| | ||||| |||||  ||||||||    
T  27528931 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttatacgg-ggcccccgcaagtgggcggtgagattggtcc 27528834  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  27528833 cctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 34995493 - 34995386
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagaga--gaaattaa 185  Q
    |||||| |||||||||| ||| ||||||  ||| |||| | |||||| |||||||| ||| |||||||||| ||| ||||||||||||||  |||| |||    
T  34995493 tttgaacaatcatttgtttgataactttagggacaaccataaatttataaagaaaaataggtattgacacggaaaccaaagtaatagagagtgaaagtaa 34995394  T
Q  186 aaacataa 193  Q
    ||||||||    
T  34995393 aaacataa 34995386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 52895359 - 52895292
Alignment:
Q  130 atttacaaagaaaat-tagatattgacacgaaaatcaaagtaatagagag--aaattaaaaacataat 194  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||  ||| ||||||||||||    
T  52895359 atttacaaagaaaatgtagatattgacacgaaaatcaaagcaatagagagataaaataaaaacataat 52895292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 354
Target Start/End: Original strand, 25852275 - 25852412
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggc-ttagaacggaatccccctctagtggacggtggaattggtc 314  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| ||| ||| ||||| | ||| | | ||||| |  ||| |||||||    
T  25852275 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaaacggga-ccctcgcaagtgggcaatgggattggtc 25852372  T
Q  315 ccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||||| || |||||| |||||| ||||||||    
T  25852373 ccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 45787840 - 45787703
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||| |||||||||| |||||| ||||||||||| ||||| |||| |||||  ||| |   ||||| | |||||||||||| ||||||||    
T  45787840 ttcgattccctctgatgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacaggg-cccccgcaagtggacggtgggattggtcc 45787743  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  | ||||||||||||| |||||||||    
T  45787742 cctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 10474031 - 10474104
Alignment:
Q  108 acaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaa 181  Q
    |||||||||| || |||| | |||||||||||||||  |  ||||||||| |||||||||||||||||||||||    
T  10474031 acaacttttatgacaaccataaatttacaaagaaaaagaagtattgacacaaaaatcaaagtaatagagagaaa 10474104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 47111074 - 47111001
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatggatat 202  Q
    |||| ||||||||||||| ||||||||| ||||| ||||  |||||||| |||||||||| |||||||| ||||    
T  47111074 aattcacaaagaaaattaaatattgacatgaaaaccaaaacaatagagaaaaattaaaaatataatatgaatat 47111001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 193662 - 193614
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  193662 tttacaaagaaaaatatgtattgacacgaaaatcaaagtaatagagaga 193614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 173
Target Start/End: Original strand, 19174662 - 19174758
Alignment:
Q  77 gagatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaata 173  Q
    ||||||| || |||||| || || ||||||||||||||||  || || | | ||||||||||||||||||| |||  |||||||||||||| |||||    
T  19174662 gagatgtgttatttgaacaaccaattgtgtgacaacttttgagacaaacataaatttacaaagaaaattaggtatcaacacgaaaatcaaaataata 19174758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 41621623 - 41621583
Alignment:
Q  313 tcccctcagattagtctgtccttggatcggataacgagttt 353  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  41621623 tcccctcagattagtcggtccttggatcggataacgagttt 41621583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 47288266 - 47288162
Alignment:
Q  77 gagatgtcttgtttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagag 176  Q
    ||||||| || ||||||||| ||||||||||| || |||| | | |||| | ||||||||||||||| ||| ||| |||||| ||| ||||  |||||||    
T  47288266 gagatgtgttatttgaataaccatttgtgtgataatttttggaacaaccataaatttacaaagaaaagtaggtatcgacacggaaaccaaaacaatagag 47288167  T
Q  177 agaaa 181  Q
    |||||    
T  47288166 agaaa 47288162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 50608566 - 50608614
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  50608566 tttacaaaggaaatgagatattgacacaaaaatcaaagtaatagagaga 50608614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 23639762 - 23639821
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||| |||||||||||| ||||||||  | ||||||||||||| ||||||||    
T  23639762 agtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 23645420 - 23645479
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||||||||||| |||||||||||| ||||||||  | ||||||||||||| ||||||||    
T  23645420 agtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 355
Target Start/End: Original strand, 32986262 - 32986395
Alignment:
Q  221 attccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctc 319  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||| |||||| | |||  || ||   ||||| | ||||| |||||| ||||||||||||    
T  32986262 attccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaatgg-ggcccccgcaagtgggcggtgggattggtcccctc 32986359  T
Q  320 agattagtctgtccttggatcggataacgagttttc 355  Q
     || |||||  | ||||||||||||| |||||||||    
T  32986360 ggaatagtcgattcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 355
Target Start/End: Complemental strand, 54127474 - 54127341
Alignment:
Q  221 attccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctc 319  Q
    ||||| ||| |||||||||||||||||| ||||| ||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||||||    
T  54127474 attccctcttgtgccaatttcggtgggctaagtctatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcccctc 54127377  T
Q  320 agattagtctgtccttggatcggataacgagttttc 355  Q
     |||||||| || |||||| ||||||  ||||||||    
T  54127376 ggattagtcggttcttggaccggatactgagttttc 54127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 2575732 - 2575798
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatg 197  Q
    |||||||||||||| ||| ||||||||  ||| ||||| |||||||||||| ||| |||||||||||    
T  2575732 tttacaaagaaaatgagagattgacacacaaaccaaagcaatagagagaaagtaacaacataatatg 2575798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 354
Target Start/End: Complemental strand, 33696411 - 33696279
Alignment:
Q  221 attccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctc 319  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  || ||   ||||| | ||||| |||||  |||||||| |||    
T  33696411 attccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatgg-ggcccccgcaagtgggcggtgagattggtcctctc 33696314  T
Q  320 agattagtctgtccttggatcggataacgagtttt 354  Q
     ||||||||  | ||||||||||||| ||||||||    
T  33696313 ggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 38376432 - 38376482
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaa 181  Q
    |||||||||||||| ||||| || ||| |||||||||||||||||||||||    
T  38376432 tttacaaagaaaatgagatagtggcacaaaaatcaaagtaatagagagaaa 38376482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 39343611 - 39343657
Alignment:
Q  308 attggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||    
T  39343611 attggtcccctcaaattagtctgtccttggatcggatactgagtttt 39343657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 39478566 - 39478516
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaa 181  Q
    |||||||||||||| || ||||||||| ||||||||||||||| |||||||    
T  39478566 tttacaaagaaaatgaggtattgacacaaaaatcaaagtaatatagagaaa 39478516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 39654955 - 39654905
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||||| || ||||||||| |||||||||| ||||||||||    
T  39654955 aatttacaaagaaaatgaggtattgacacaaaaatcaaagcaatagagaga 39654905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 354
Target Start/End: Original strand, 40307614 - 40307736
Alignment:
Q  229 tggtgccaatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtc 328  Q
    |||||||||||||||||| |||||||||||  |  ||||||| || ||||||||   | |||| ||||||||||||||||||| |||||||  ||||||     
T  40307614 tggtgccaatttcggtgg-caagtccatactgatatttgctctggtttagaacgc--tgccccactagtggacggtggaattgatcccctcgaattagtt 40307710  T
Q  329 tgtccttggatcggataacgagtttt 354  Q
     |||||| |||| |||| | ||||||    
T  40307711 ggtccttagatcagataccaagtttt 40307736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 40590743 - 40590657
Alignment:
Q  116 taggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatggatat 202  Q
    ||||| |||| | |||||| ||||||||||||||||||| ||  ||| |||| ||||||||| ||  ||||||||||||||| ||||    
T  40590743 taggacaaccataaatttataaagaaaattagatattgatacagaaaccaaaataatagagaaaagataaaaacataatatgaatat 40590657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 24045354 - 24045309
Alignment:
Q  149 tattgacacgaaaatcaaagtaatagagagaaattaaaaacataat 194  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||    
T  24045354 tattgacacaaaaatcaaagcaatagagagaaagtaaaaacataat 24045309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 353
Target Start/End: Original strand, 12710258 - 12710373
Alignment:
Q  235 caatttcggtgggcaagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagtctgtcct 334  Q
    |||||||||||| ||||||||||||  ||||||||| |||||||||| |   | |   | ||||  ||| || ||||||| |||||||||| || |||||    
T  12710258 caatttcggtggacaagtccatacagtgctttgctctggcttagaactg---ctctggcaagtgagcggagggattggtcacctcagattaatcggtcct 12710354  T
Q  335 tggatcggataacgagttt 353  Q
    ||||||||||| |||||||    
T  12710355 tggatcggataccgagttt 12710373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 37997383 - 37997335
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| || ||||||||| |||||||||| ||||||||||    
T  37997383 tttacaaagaaaatgaggtattgacacaaaaatcaaagcaatagagaga 37997335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 39288938 - 39288985
Alignment:
Q  235 caatttcggtgggcaagtccatacaaagctttgctccggcttagaacgg 283  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  39288938 caatttcggtgggcaagtccatacagagc-ttgctctggcttagaacgg 39288985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 55609106 - 55609154
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||||||||    
T  55609106 tttacaaagaaaaatatgtattggcacgaaaatcaaagtaatagagaga 55609154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 7093509 - 7093568
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||| ||||||||| ||  ||||||| |||||||||||||||| ||||||||    
T  7093509 agtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagtttt 7093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 24990287 - 24990232
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaa 143  Q
    ||||||||||||||||| ||||||||| | ||| |||| | |||||||||||||||    
T  24990287 tttgaataatcatttgtatgacaacttatgggacaaccataaatttacaaagaaaa 24990232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 28458316 - 28458367
Alignment:
Q  129 aatttacaaagaaaat-tagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||||  ||| |||||||||||||||||||| ||||||||||    
T  28458316 aatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaatagagaga 28458367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 32990496 - 32990633
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| | | |||||||||||||||||| ||||||||||| ||||| |||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  32990496 ttcgattccctttagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 32990593  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| || |||||  | ||||||||| |||  ||||||||    
T  32990594 cctcggactagtcgattcttggatcgaatactgagttttc 32990633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 35936138 - 35936083
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaa 143  Q
    |||||| |||||||||||||||||||||||||| |||| |  ||| ||||||||||    
T  35936138 tttgaacaatcatttgtgtgacaacttttaggacaaccatacattcacaaagaaaa 35936083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 355
Target Start/End: Original strand, 46714466 - 46714591
Alignment:
Q  229 tggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcccctcagattagt 327  Q
    |||||||||||||||||||| ||||||||||| ||||| || |  ||||  |||||   ||||| | ||||| |||||| |||||||||||| |||||||    
T  46714466 tggtgccaatttcggtgggctaagtccatacagagctt-gcccttgctttaaacgggg-cccccgcaagtgggcggtgggattggtcccctcggattagt 46714563  T
Q  328 ctgtccttggatcggataacgagttttc 355  Q
    |  | |||| |||||||| |||||||||    
T  46714564 caattcttgaatcggataccgagttttc 46714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 50831654 - 50831745
Alignment:
Q  88 tttgaataatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||| || ||||||  ||||||||||| ||| |||| | | |||||||||||||  || | ||||||| |||||||||| ||||||||||    
T  50831654 tttgaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaagcaatagagaga 50831745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 10125892 - 10125934
Alignment:
Q  228 ctggtgccaatttcggtgggcaagtccatacaaagctttgctc 270  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  10125892 ctggtgccaatttcagtgggcaaggccatacagagctttgctc 10125934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 355
Target Start/End: Complemental strand, 22488081 - 22488027
Alignment:
Q  301 cggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||||| |||| |||||||| ||||||| |||||||||||||||| | |||||||    
T  22488081 cggtgggattgatcccctcaaattagtcggtccttggatcggataccaagttttc 22488027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 23668044 - 23667943
Alignment:
Q  95 aatcatttgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaat--agagagaaattaaaaacata 192  Q
    ||||||||  |||||||||||| ||| || | | ||||||||||||||  ||| ||||||||||||||  ||| ||||  ||| ||||| ||||||||||    
T  23668044 aatcattttagtgacaacttttgggacaatcattaatttacaaagaaacatagttattgacacgaaaactaaaataataaagaaagaaagtaaaaacata 23667945  T
Q  193 at 194  Q
    ||    
T  23667944 at 23667943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 24509327 - 24509377
Alignment:
Q  129 aatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    ||||||||||||||| |||||| ||||||| ||| |||| |||||||||||    
T  24509327 aatttacaaagaaaaatagatagtgacacggaaaccaaaataatagagaga 24509377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 41621722 - 41621680
Alignment:
Q  227 tctggtgccaatttcggtgggcaagtccatacaaagctttgct 269  Q
    |||||||||||||| ||||||||| |||||||| |||||||||    
T  41621722 tctggtgccaattttggtgggcaaatccatacagagctttgct 41621680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 11672065 - 11672122
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaa 188  Q
    |||| ||||||||| |  ||||||||| |||||||||| |||||||||||| ||||||    
T  11672065 tttataaagaaaataaattattgacacaaaaatcaaagcaatagagagaaagtaaaaa 11672122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 22625206 - 22625157
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| |||||    
T  22625206 ttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 22625157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 23662246 - 23662326
Alignment:
Q  119 gataaccctgaatttacaaagaaaat-tagatattgacacgaaaatcaaagtaatagagag--aaattaaaaacataatat 196  Q
    ||||||| | |||||||||||||||  | ||||||| ||||||||||||| ||| ||||||  ||| ||||||||||||||    
T  23662246 gataaccataaatttacaaagaaaaaattgatattggcacgaaaatcaaaataacagagagataaaataaaaacataatat 23662326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 28791186 - 28791235
Alignment:
Q  227 tctggtgccaatttcggtgggcaagtccatacaaagctttgctccggctt 276  Q
    ||||||| ||||||||||||| ||||| ||||||| |||||||| |||||    
T  28791186 tctggtgtcaatttcggtgggtaagtctatacaaaactttgctctggctt 28791235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 33992687 - 33992736
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| |||||    
T  33992687 ttcgattctctctggtgccaatttcggtgggctaagtccatacatagctt 33992736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 35674877 - 35674828
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctt 265  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| |||||    
T  35674877 ttcgattccctctggagccaatttcggtgggctaagtccatacagagctt 35674828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 35874815 - 35874892
Alignment:
Q  102 tgtgtgacaacttttaggataaccctgaatttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||| |||||||||| ||| |||  | ||||||||||||||| || ||||||| ||| ||||||||  ||||||||||    
T  35874815 tgtgcgacaacttttgggacaactataaatttacaaagaaaagtatatattgatacggaaatcaaaacaatagagaga 35874892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 49287919 - 49287964
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaa 261  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||    
T  49287919 ttcgattctctctggtgccaatttcggtgggctaagtccatacaaa 49287964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 19660591 - 19660531
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||| |||||| |||| ||||||| ||||||||  | ||||||||||||| |||||||||    
T  19660591 agtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 19660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 21621680 - 21621732
Alignment:
Q  301 cggtggaattggtcccctcagattagtctgtccttggatcggataacgagttt 353  Q
    ||||||||||||| ||||| |||||| | ||||||||||| |||| |||||||    
T  21621680 cggtggaattggttccctcggattagccggtccttggatcagatatcgagttt 21621732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 31838768 - 31838713
Alignment:
Q  137 aagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataa 193  Q
    |||||||| ||||| |||| | ||||||||||||||||||||||| |||||| ||||    
T  31838768 aagaaaatgagatagtgacgc-aaaatcaaagtaatagagagaaaataaaaatataa 31838713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 51255876 - 51255828
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||| ||||||| || ||| |||||||||| ||||||||||    
T  51255876 tttacaaagaaatttagatagtggcacaaaaatcaaagcaatagagaga 51255828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 5218 - 5081
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | | ||| |||||| ||||||||    
T  5218 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaaatgggcggtgggattggtcc 5121  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  5120 cctcggattagtcgattcttggatcggataccgagttttc 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 40386 - 40522
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  |||||   ||||| | ||||| |||||| |||||| |    
T  40386 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggt-c 40482  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | ||||||||||||| |||||||||    
T  40483 cctcggattagtcgattcttggatcggataccgagttttc 40522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 161870 - 162007
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||  || ||   ||||| | ||||| |||||| ||||||||    
T  161870 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggcttttaatgg-ggcccccgcaagtgggcggtgggattggtcc 161967  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | |||||||| |||| |||||||||    
T  161968 cctcggattagtcgattcttggatcagataccgagttttc 162007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 7445 - 7309
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| || ||||||||||||||||||| ||||||||||| |||||| ||| |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  7445 ttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttt-ctctggctttaaacgg-ggcccccgcaagtgggcggtgggattggtcc 7348  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    |||| ||||||||  | ||||||||||||| | ||||||    
T  7347 cctcggattagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 66892 - 66951
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||| |||||||||||| |||||||| |||||||||||||||| ||||||||    
T  66892 agtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 97502 - 97366
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| | |||  ||||| | ||||| | ||||| |||||| ||||||||    
T  97502 ttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacggga-cccccgcaagtgggcggtgggattggtcc 97405  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
     |||  ||||||| ||  ||||| |||||| ||||||||    
T  97404 tctcgtattagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 5969 - 6013
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggat 339  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||    
T  5969 agtggacggtgggattggtcacctcagattagtcggtccttggat 6013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 2485 - 2426
Alignment:
Q  295 agtggacggtggaattggtcccctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||| |||||| |||||||||||| |||||||| ||||||| |||||||| ||||||||    
T  2485 agtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagtttt 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 9435 - 9299
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| ||| |||||| |||||  || ||   ||||| | |||||||||||| ||||||||    
T  9435 ttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatgg-ggcccccgcaagtggacggtgggattggtcc 9338  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    ||||  |||||||  | ||| ||||||||| |||||||||    
T  9337 cctcgaattagtcgattctt-gatcggataccgagttttc 9299  T

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Target: scaffold0102 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 39153 - 39290
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaa-gtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| | ||||||||| | ||| | || |||||  |||||   ||||| | ||||| |||||| ||||||||    
T  39153 ttcgattccctctggtgccaatttcggtgggctatgtccatacagaactt-gttctggctttaaacgggg-cccccgcaagtgggcggtgggattggtcc 39250  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
    |||| ||||||||  | |||||||| |||| |||||||||    
T  39251 cctcggattagtcgattcttggatcagataccgagttttc 39290  T

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Target: scaffold0623 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 1192 - 1057
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||| ||| |||||| |||||  || ||   ||||| | |||||||||||| ||||||||    
T  1192 ttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatgg-ggcccccgcaagtggacggtgggattggtcc 1095  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||  |||||||  | ||| ||||||||| ||||||||    
T  1094 cctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 123187 - 123146
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggcaagtccatac 258  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  123187 ttcgattccctctgttgccaatttcggtgggcaagtccatac 123146  T

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Target: scaffold0328 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 13180 - 13047
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||  ||||||||||| ||||| ||| |   ||  |||||   ||||| | |||||||||||| |||| |||    
T  13180 ttcgattccctctggtgccaatttcggtgggttaagtccatacagagctt-gctac---tttaaacgggg-cccccgcaagtggacggtgggattgatcc 13086  T
Q  316 cctcagattagtctgtccttggatcggataacgagtttt 354  Q
    ||||||||||||   | ||||||||||||| ||||||||    
T  13085 cctcagattagttgattcttggatcggataccgagtttt 13047  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 53007 - 52870
Alignment:
Q  217 ttcgattccatctggtgccaatttcggtgggc-aagtccatacaaagctttgctccggcttagaacggaatccccctctagtggacggtggaattggtcc 315  Q
    ||||||||| |||||||||||||||||||||| || |||||||| ||| |||||| |||||  |||||   ||||| |  |||| |||| | ||||||||    
T  53007 ttcgattccctctggtgccaatttcggtgggcaaaatccatacagagc-ttgctctggctttaaacgg-ggcccccgcaggtgggcggtaggattggtcc 52910  T
Q  316 cctcagattagtctgtccttggatcggataacgagttttc 355  Q
     ||| ||||||||  | |||| |||||||| |||||||||    
T  52909 tctcggattagtcgattcttgaatcggataccgagttttc 52870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 90088 - 90021
Alignment:
Q  130 atttacaaagaaaattagatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatatg 197  Q
    |||||||||||||||||  ||||||||  |||| ||||| |||||||| ||| ||||||||| |||||    
T  90088 atttacaaagaaaattaagtattgacataaaaaccaaaggaatagagaaaaagtaaaaacatgatatg 90021  T

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Target: scaffold0257 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 24098 - 24060
Alignment:
Q  134 acaaagaaaattagatattgacacgaaaatcaaagtaat 172  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  24098 acaaagaaaagtagatattgacacaaaaatcaaagtaat 24060  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 246788 - 246723
Alignment:
Q  131 tttacaaagaaaatta-gatattgacacgaaaatcaaagtaatagagagaaattaaaaacataatat 196  Q
    ||||||||||||| || ||| ||| |||||||| |||||||||||||||||| |||||| |||||||    
T  246788 tttacaaagaaaagtatgat-ttggcacgaaaaccaaagtaatagagagaaagtaaaaatataatat 246723  T

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Target: scaffold0519 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 11911 - 11863
Alignment:
Q  131 tttacaaagaaaattagatattgacacgaaaatcaaagtaatagagaga 179  Q
    |||||||||||||| || ||||||||| |||| ||||| ||||||||||    
T  11911 tttacaaagaaaatgaggtattgacacaaaaaccaaagcaatagagaga 11863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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