View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_344 (Length: 244)

Name: NF9839A_low_344
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_344
NF9839A_low_344
[»] chr6 (33 HSPs)
chr6 (80-244)||(13579648-13579812)
chr6 (137-244)||(13564919-13565026)
chr6 (137-244)||(13569474-13569581)
chr6 (137-244)||(13574020-13574127)
chr6 (137-244)||(13576559-13576666)
chr6 (83-141)||(22684358-22684416)
chr6 (83-141)||(22754652-22754710)
chr6 (83-138)||(10039674-10039729)
chr6 (80-137)||(21031978-21032035)
chr6 (80-138)||(3403986-3404045)
chr6 (82-137)||(33655114-33655169)
chr6 (80-133)||(3825530-3825583)
chr6 (83-136)||(3403717-3403771)
chr6 (80-137)||(18241853-18241911)
chr6 (87-145)||(30388053-30388111)
chr6 (177-218)||(6691547-6691588)
chr6 (80-136)||(11656779-11656836)
chr6 (175-211)||(17149588-17149624)
chr6 (175-211)||(28741973-28742009)
chr6 (81-140)||(30388360-30388420)
chr6 (83-142)||(33828984-33829044)
chr6 (83-138)||(33829636-33829692)
chr6 (162-209)||(6384008-6384055)
chr6 (163-209)||(10377732-10377778)
chr6 (83-137)||(29074372-29074426)
chr6 (83-137)||(29079136-29079190)
chr6 (83-137)||(29106945-29106999)
chr6 (87-133)||(31598732-31598778)
chr6 (80-137)||(23250591-23250648)
chr6 (84-137)||(31598274-31598327)
chr6 (164-209)||(33499492-33499537)
chr6 (175-211)||(9208281-9208317)
chr6 (80-136)||(33971994-33972050)
[»] chr4 (46 HSPs)
chr4 (80-145)||(3930477-3930542)
chr4 (80-139)||(16555512-16555572)
chr4 (80-135)||(8488479-8488534)
chr4 (83-136)||(16555817-16555871)
chr4 (164-209)||(13017747-13017792)
chr4 (80-137)||(35393773-35393830)
chr4 (83-139)||(11241661-11241717)
chr4 (83-141)||(9023239-9023298)
chr4 (162-216)||(4088266-4088320)
chr4 (80-137)||(13198903-13198961)
chr4 (80-137)||(18077199-18077257)
chr4 (83-137)||(26207360-26207414)
chr4 (80-136)||(11241389-11241446)
chr4 (163-216)||(37980146-37980199)
chr4 (162-211)||(47183345-47183394)
chr4 (163-216)||(56409975-56410028)
chr4 (83-143)||(23539834-23539893)
chr4 (80-136)||(27304718-27304773)
chr4 (83-146)||(39744465-39744529)
chr4 (83-138)||(50678777-50678833)
chr4 (83-138)||(56505691-56505747)
chr4 (80-135)||(22681576-22681631)
chr4 (83-137)||(28196773-28196828)
chr4 (83-141)||(32703650-32703709)
chr4 (177-216)||(37492716-37492755)
chr4 (83-137)||(43051252-43051307)
chr4 (85-143)||(47219203-47219262)
chr4 (83-136)||(4239366-4239420)
chr4 (162-208)||(4686134-4686180)
chr4 (80-133)||(13198606-13198660)
chr4 (162-208)||(25414221-25414267)
chr4 (157-219)||(29195113-29195175)
chr4 (83-137)||(48405961-48406015)
chr4 (83-137)||(169012-169068)
chr4 (80-135)||(8181992-8182049)
chr4 (86-138)||(9380744-9380797)
chr4 (83-135)||(11529169-11529222)
chr4 (83-135)||(25161879-25161932)
chr4 (83-139)||(28196343-28196400)
chr4 (80-132)||(49178813-49178866)
chr4 (80-136)||(3930179-3930235)
chr4 (175-211)||(19220562-19220598)
chr4 (177-209)||(27908542-27908574)
chr4 (85-136)||(39086625-39086677)
chr4 (164-216)||(40252316-40252368)
chr4 (164-204)||(41621735-41621775)
[»] chr7 (45 HSPs)
chr7 (35-134)||(33628397-33628496)
chr7 (31-145)||(13772847-13772964)
chr7 (83-139)||(13772638-13772695)
chr7 (80-137)||(9412022-9412080)
chr7 (84-141)||(6908208-6908265)
chr7 (80-140)||(9412322-9412383)
chr7 (84-136)||(35079960-35080012)
chr7 (164-211)||(1469134-1469181)
chr7 (80-135)||(8953886-8953941)
chr7 (164-211)||(40332121-40332168)
chr7 (83-137)||(13744233-13744287)
chr7 (80-142)||(3687347-3687411)
chr7 (80-136)||(3687653-3687710)
chr7 (85-138)||(18864404-18864457)
chr7 (84-141)||(23686416-23686473)
chr7 (89-141)||(23686723-23686776)
chr7 (80-133)||(27096339-27096392)
chr7 (80-133)||(27181911-27181964)
chr7 (83-143)||(44599482-44599543)
chr7 (83-136)||(48359320-48359373)
chr7 (83-138)||(10533032-10533088)
chr7 (31-67)||(15567221-15567257)
chr7 (83-142)||(37888827-37888887)
chr7 (83-138)||(37889259-37889315)
chr7 (82-138)||(42419028-42419084)
chr7 (83-141)||(13863308-13863367)
chr7 (83-137)||(16198977-16199032)
chr7 (83-141)||(20418883-20418942)
chr7 (83-137)||(37972396-37972451)
chr7 (83-137)||(44600135-44600190)
chr7 (83-136)||(9035293-9035347)
chr7 (160-214)||(21050141-21050195)
chr7 (83-133)||(22740591-22740641)
chr7 (83-136)||(3204669-3204721)
chr7 (84-133)||(6908485-6908534)
chr7 (82-142)||(9034861-9034922)
chr7 (157-210)||(18847427-18847480)
chr7 (175-208)||(22696353-22696386)
chr7 (83-139)||(37971957-37972014)
chr7 (83-135)||(18925322-18925373)
chr7 (89-141)||(27096042-27096094)
chr7 (89-141)||(27182209-27182261)
chr7 (175-211)||(28647002-28647038)
chr7 (83-138)||(33628660-33628716)
chr7 (83-123)||(35080223-35080263)
[»] chr1 (51 HSPs)
chr1 (80-137)||(13589656-13589713)
chr1 (80-141)||(17518298-17518359)
chr1 (164-219)||(1138597-1138652)
chr1 (80-134)||(17518599-17518653)
chr1 (82-136)||(20371352-20371406)
chr1 (83-141)||(27172111-27172169)
chr1 (80-138)||(41083208-41083266)
chr1 (80-137)||(22149402-22149458)
chr1 (84-136)||(20480613-20480665)
chr1 (83-137)||(20480167-20480221)
chr1 (80-137)||(47955305-47955363)
chr1 (83-136)||(48105116-48105170)
chr1 (83-147)||(9347115-9347180)
chr1 (177-214)||(23439877-23439914)
chr1 (157-218)||(34228892-34228953)
chr1 (83-136)||(50615621-50615674)
chr1 (83-136)||(50623449-50623502)
chr1 (175-211)||(24217007-24217043)
chr1 (83-138)||(28633718-28633774)
chr1 (83-138)||(32163043-32163099)
chr1 (87-138)||(999529-999580)
chr1 (83-141)||(6002232-6002291)
chr1 (83-137)||(8108993-8109048)
chr1 (83-138)||(9347551-9347606)
chr1 (80-138)||(31848189-31848248)
chr1 (165-219)||(33700768-33700823)
chr1 (157-208)||(37047003-37047054)
chr1 (80-138)||(47955605-47955664)
chr1 (83-141)||(48190766-48190825)
chr1 (83-137)||(49284408-49284463)
chr1 (81-138)||(8108719-8108777)
chr1 (162-208)||(39964528-39964574)
chr1 (177-219)||(43983701-43983743)
chr1 (87-136)||(1176717-1176766)
chr1 (167-219)||(2799890-2799943)
chr1 (88-137)||(19007734-19007783)
chr1 (85-133)||(22149701-22149750)
chr1 (175-219)||(40810503-40810548)
chr1 (162-211)||(41470614-41470663)
chr1 (85-133)||(42611188-42611237)
chr1 (177-214)||(47360514-47360551)
chr1 (87-136)||(49317752-49317801)
chr1 (87-136)||(49318170-49318219)
chr1 (85-137)||(50429655-50429708)
chr1 (163-211)||(3334793-3334841)
chr1 (157-209)||(15581147-15581199)
chr1 (83-142)||(26814688-26814748)
chr1 (164-204)||(39714789-39714829)
chr1 (83-135)||(47498495-47498547)
chr1 (83-138)||(48191355-48191411)
chr1 (83-134)||(50526472-50526524)
[»] scaffold0319 (2 HSPs)
scaffold0319 (80-136)||(6694-6750)
scaffold0319 (80-137)||(6393-6451)
[»] scaffold0110 (2 HSPs)
scaffold0110 (80-139)||(45804-45863)
scaffold0110 (80-137)||(45536-45593)
[»] chr5 (41 HSPs)
chr5 (83-146)||(22429196-22429259)
chr5 (83-137)||(37610201-37610255)
chr5 (83-137)||(37780319-37780373)
chr5 (83-140)||(22428930-22428987)
chr5 (84-141)||(23011074-23011131)
chr5 (83-136)||(34577164-34577217)
chr5 (157-216)||(16172982-16173041)
chr5 (80-142)||(25175148-25175211)
chr5 (157-211)||(14656647-14656701)
chr5 (81-138)||(25115755-25115813)
chr5 (81-138)||(25174847-25174905)
chr5 (83-133)||(43463759-43463809)
chr5 (81-141)||(5187828-5187889)
chr5 (82-142)||(25116060-25116121)
chr5 (83-146)||(12498557-12498621)
chr5 (85-141)||(43464194-43464250)
chr5 (83-137)||(26020449-26020504)
chr5 (83-136)||(18433015-18433069)
chr5 (80-137)||(18433313-18433371)
chr5 (83-137)||(41383167-41383221)
chr5 (83-139)||(12498928-12498985)
chr5 (84-133)||(23011383-23011432)
chr5 (83-139)||(26571164-26571221)
chr5 (85-142)||(37610620-37610677)
chr5 (175-211)||(8780507-8780543)
chr5 (83-142)||(18816946-18817006)
chr5 (83-135)||(22729440-22729492)
chr5 (162-209)||(5005773-5005819)
chr5 (164-211)||(15485423-15485470)
chr5 (87-141)||(16466746-16466801)
chr5 (80-138)||(33324835-33324894)
chr5 (83-133)||(9665560-9665609)
chr5 (84-142)||(9665828-9665885)
chr5 (83-136)||(18817611-18817665)
chr5 (86-136)||(22729008-22729058)
chr5 (83-133)||(34576870-34576920)
chr5 (85-142)||(37780744-37780802)
chr5 (91-136)||(12441320-12441364)
chr5 (85-138)||(31569905-31569958)
chr5 (177-214)||(32340337-32340374)
chr5 (90-134)||(2817582-2817626)
[»] chr3 (37 HSPs)
chr3 (82-137)||(47871121-47871176)
chr3 (161-208)||(26158833-26158880)
chr3 (83-145)||(14015964-14016026)
chr3 (87-136)||(42627550-42627599)
chr3 (83-136)||(42672978-42673031)
chr3 (163-211)||(34844395-34844443)
chr3 (83-138)||(40848961-40849017)
chr3 (83-143)||(42673296-42673356)
chr3 (157-216)||(42799746-42799805)
chr3 (80-141)||(10293906-10293968)
chr3 (80-141)||(18875188-18875250)
chr3 (83-141)||(24485460-24485518)
chr3 (83-144)||(27238900-27238962)
chr3 (83-137)||(40848520-40848574)
chr3 (83-136)||(3353128-3353181)
chr3 (162-215)||(28834972-28835025)
chr3 (85-141)||(47665906-47665963)
chr3 (164-204)||(4252535-4252575)
chr3 (81-136)||(17372298-17372354)
chr3 (84-143)||(27238458-27238518)
chr3 (157-208)||(44069776-44069828)
chr3 (83-138)||(48159895-48159951)
chr3 (83-142)||(17372594-17372652)
chr3 (84-138)||(18874880-18874935)
chr3 (84-138)||(45060872-45060927)
chr3 (80-137)||(20968717-20968775)
chr3 (83-136)||(20969019-20969073)
chr3 (84-148)||(1101182-1101247)
chr3 (85-138)||(3353553-3353606)
chr3 (83-136)||(9027033-9027086)
chr3 (83-141)||(21895652-21895712)
chr3 (162-211)||(35623270-35623319)
chr3 (83-139)||(36180990-36181047)
chr3 (178-219)||(40777052-40777093)
chr3 (165-216)||(47454615-47454667)
chr3 (83-138)||(47870821-47870877)
chr3 (163-219)||(53863863-53863919)
[»] chr8 (40 HSPs)
chr8 (80-137)||(43246173-43246231)
chr8 (80-141)||(12281423-12281485)
chr8 (80-134)||(23123514-23123567)
chr8 (80-140)||(16928938-16928999)
chr8 (80-136)||(16929239-16929296)
chr8 (80-141)||(34313760-34313820)
chr8 (80-139)||(15155880-15155940)
chr8 (83-141)||(24473338-24473397)
chr8 (87-138)||(33747982-33748033)
chr8 (80-142)||(41662101-41662164)
chr8 (83-137)||(13936722-13936776)
chr8 (84-141)||(15042140-15042198)
chr8 (80-142)||(18020085-18020146)
chr8 (83-140)||(34498555-34498613)
chr8 (80-136)||(37752413-37752470)
chr8 (80-136)||(41662400-41662457)
chr8 (80-136)||(43245871-43245928)
chr8 (81-129)||(7127660-7127708)
chr8 (85-140)||(13026631-13026687)
chr8 (83-146)||(13027281-13027345)
chr8 (80-136)||(43162234-43162290)
chr8 (83-134)||(74688-74739)
chr8 (80-134)||(765736-765791)
chr8 (83-137)||(9823361-9823416)
chr8 (85-139)||(22786837-22786892)
chr8 (164-211)||(34639338-34639385)
chr8 (83-141)||(39724048-39724107)
chr8 (161-208)||(40136969-40137016)
chr8 (80-137)||(12281123-12281181)
chr8 (83-136)||(37752084-37752138)
chr8 (97-138)||(767720-767761)
chr8 (83-136)||(9623882-9623935)
chr8 (80-136)||(15156182-15156239)
chr8 (177-214)||(22779693-22779730)
chr8 (83-139)||(37396705-37396762)
chr8 (80-109)||(37670128-37670157)
chr8 (85-137)||(41662520-41662573)
chr8 (83-134)||(25438794-25438846)
chr8 (83-146)||(37397145-37397209)
chr8 (80-132)||(43162536-43162588)
[»] scaffold0001 (2 HSPs)
scaffold0001 (80-138)||(439196-439255)
scaffold0001 (80-136)||(438930-438987)
[»] chr2 (44 HSPs)
chr2 (80-139)||(17346032-17346091)
chr2 (80-137)||(11883622-11883680)
chr2 (80-136)||(11883923-11883980)
chr2 (80-137)||(26737481-26737537)
chr2 (175-211)||(18708506-18708542)
chr2 (83-141)||(5378656-5378715)
chr2 (85-136)||(6171156-6171207)
chr2 (164-211)||(8192483-8192530)
chr2 (83-137)||(24832330-24832385)
chr2 (80-138)||(30190921-30190980)
chr2 (83-137)||(7980003-7980057)
chr2 (80-134)||(18055050-18055103)
chr2 (80-137)||(20347461-20347519)
chr2 (83-140)||(26841583-26841641)
chr2 (80-133)||(40469726-40469780)
chr2 (85-141)||(29230277-29230334)
chr2 (83-138)||(2639482-2639538)
chr2 (164-216)||(6099517-6099569)
chr2 (83-138)||(20347161-20347217)
chr2 (81-133)||(32673141-32673193)
chr2 (164-208)||(40591201-40591245)
chr2 (164-211)||(4618817-4618864)
chr2 (83-137)||(6171456-6171511)
chr2 (83-142)||(7979561-7979619)
chr2 (83-141)||(17850973-17851032)
chr2 (83-137)||(18296693-18296748)
chr2 (164-211)||(19605977-19606024)
chr2 (83-133)||(26692820-26692871)
chr2 (83-141)||(26737781-26737840)
chr2 (83-137)||(37720203-37720258)
chr2 (85-136)||(40221313-40221364)
chr2 (162-216)||(26482116-26482170)
chr2 (165-219)||(28194257-28194311)
chr2 (80-141)||(30191222-30191284)
chr2 (80-141)||(40469422-40469484)
chr2 (83-140)||(16911269-16911326)
chr2 (80-133)||(17345736-17345788)
chr2 (83-140)||(18750126-18750183)
chr2 (83-138)||(5379959-5380015)
chr2 (164-208)||(8379404-8379448)
chr2 (81-141)||(15321387-15321446)
chr2 (85-131)||(40469607-40469655)
chr2 (83-142)||(41790912-41790972)
chr2 (80-136)||(43495602-43495658)
[»] scaffold0192 (1 HSPs)
scaffold0192 (80-137)||(25366-25424)
[»] scaffold0069 (1 HSPs)
scaffold0069 (82-136)||(50506-50560)
[»] scaffold0009 (1 HSPs)
scaffold0009 (80-137)||(205686-205743)
[»] scaffold0376 (2 HSPs)
scaffold0376 (80-136)||(7597-7653)
scaffold0376 (83-137)||(7454-7508)
[»] scaffold0015 (2 HSPs)
scaffold0015 (80-136)||(17153-17209)
scaffold0015 (80-136)||(16853-16908)
[»] scaffold0160 (1 HSPs)
scaffold0160 (164-211)||(29274-29321)
[»] scaffold1221 (2 HSPs)
scaffold1221 (83-145)||(1503-1564)
scaffold1221 (80-133)||(1781-1834)
[»] scaffold0176 (2 HSPs)
scaffold0176 (83-137)||(19620-19674)
scaffold0176 (83-138)||(20043-20099)
[»] scaffold0802 (2 HSPs)
scaffold0802 (80-136)||(1118-1175)
scaffold0802 (80-136)||(1417-1474)
[»] scaffold0460 (1 HSPs)
scaffold0460 (83-136)||(763-816)
[»] scaffold0194 (1 HSPs)
scaffold0194 (154-218)||(13042-13107)
[»] scaffold0002 (1 HSPs)
scaffold0002 (80-136)||(411923-411979)
[»] scaffold0041 (1 HSPs)
scaffold0041 (83-137)||(38695-38750)
[»] scaffold0328 (1 HSPs)
scaffold0328 (83-136)||(6152-6206)
[»] scaffold0017 (1 HSPs)
scaffold0017 (83-136)||(185274-185328)
[»] scaffold0035 (1 HSPs)
scaffold0035 (80-135)||(72967-73023)
[»] scaffold0029 (1 HSPs)
scaffold0029 (82-137)||(9904-9960)


Alignment Details
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 13579648 - 13579812
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaatttaagatgaatgcttggttgtgttggcttgaaatctt 179  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  13579648 gagggggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagcctaaaatttaagatgaatgtatggttgtgttggcttgaaatctt 13579747  T
Q  180 ggagtgtgttcctctcaaggtctcaggttcgaatctctctcagatgtccatctcattgggttagc 244  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| || || ||||||||||    
T  13579748 ggagtgtgttcctctcaaggtctccggttcgaatctctctcaggtgtcaatttcgttgggttagc 13579812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 13564919 - 13565026
Alignment:
Q  137 taaaatttaagatgaatgcttggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctctcagatgtccatctcatt 236  Q
    |||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |  ||    
T  13564919 taaaatttaagatgaatgtttggttttattggcttggaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctctcaggtgtcaattttgtt 13565018  T
Q  237 gggttagc 244  Q
    ||||||||    
T  13565019 gggttagc 13565026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 13569474 - 13569581
Alignment:
Q  137 taaaatttaagatgaatgcttggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctctcagatgtccatctcatt 236  Q
    |||||||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  |||| || || ||    
T  13569474 taaaatttaagatgaatgtttggttttattggcttggaatcttggagtttgttcctctcaaggtctcaggttcgaatctctctcaagtgtcaatttcgtt 13569573  T
Q  237 gggttagc 244  Q
    ||||||||    
T  13569574 gggttagc 13569581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 13574020 - 13574127
Alignment:
Q  137 taaaatttaagatgaatgcttggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctctcagatgtccatctcatt 236  Q
    |||||||||||||||||| |||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| | || || || ||    
T  13574020 taaaatttaagatgaatgtttggttttattggcttggaatcttagagtgtgttcctctcaaggtctcaggttcgaatctctctcaggtttcaatttcgtt 13574119  T
Q  237 gggttagc 244  Q
    ||||||||    
T  13574120 gggttagc 13574127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 13576559 - 13576666
Alignment:
Q  137 taaaatttaagatgaatgcttggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctctcagatgtccatctcatt 236  Q
    |||||||||||||||||| |||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| | || || || ||    
T  13576559 taaaatttaagatgaatgtttggttttattggcttggaatcttagagtgtgttcctctcaaggtctcaggttcgaatctctctcaggtttcaatttcgtt 13576658  T
Q  237 gggttagc 244  Q
    ||||||||    
T  13576659 gggttagc 13576666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 22684358 - 22684416
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  22684358 ggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagccaaaaa 22684416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 22754710 - 22754652
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  22754710 ggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagccaaaaa 22754652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 10039729 - 10039674
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 21032035 - 21031978
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||||||||| | || ||||||||||||||||||||||    
T  21032035 gagggggtgcaaaatcgcacaattagcaaaagttagggggaaaagtgcaattaagcct 21031978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 3403986 - 3404045
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagccta 138  Q
    |||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||    
T  3403986 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccta 3404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 33655114 - 33655169
Alignment:
Q  82 gggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||    
T  33655114 gggggtgcaaaattgcacaattagcaaaagataaggggacaagtgcaattaagcct 33655169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 3825583 - 3825530
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    |||||||||||||||| |||||||||||||  ||| ||||||||||||||||||    
T  3825583 gagggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 3403771 - 3403717
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 18241911 - 18241853
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| |||||||| |||| ||||  ||||||||||||||||||||||    
T  18241911 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18241853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 30388111 - 30388053
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaattta 145  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||||||| || |||||    
T  30388111 tgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagccaaatattta 30388053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 6691588 - 6691547
Alignment:
Q  177 cttggagtgtgttcctctcaaggtctcaggttcgaatctctc 218  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  6691588 cttggagtgtgctcctctcaaggtctcaggttcgattctctc 6691547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 11656779 - 11656836
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataag-gggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||||||||| |||| | | ||||||||||||||||||    
T  11656779 gagggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 17149624 - 17149588
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17149624 atcttggagtgtgctcctctcaaggtctcaggttcga 17149588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 28742009 - 28741973
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||||| |||||||||||||||||||||||    
T  28742009 atcttggagtgtgctcctctcaaggtctcaggttcga 28741973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 30388360 - 30388420
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaa 140  Q
    ||||||||||||||| ||||||||||||| |||| |||| |||||| ||||||| ||||||    
T  30388360 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaattaaacctaaa 30388420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 33829044 - 33828984
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaat 142  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||| |||||    
T  33829044 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaat 33828984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 33829636 - 33829692
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||    
T  33829636 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 33829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 6384055 - 6384008
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttc 209  Q
    |||||||||||  | ||||||||||| |||||||||||||||||||||    
T  6384055 gtgttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 6384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 10377732 - 10377778
Alignment:
Q  163 tgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttc 209  Q
    ||||||||||| ||||||||||||| || | ||||||||||||||||    
T  10377732 tgttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttc 10377778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 29074372 - 29074426
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||| ||||||||||||    
T  29074372 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 29079136 - 29079190
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||| ||||||||||||    
T  29079136 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 29106945 - 29106999
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||| ||||||||||||    
T  29106945 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29106999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 31598732 - 31598778
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    ||||||||| |||||||| |||| |||| ||||||||||||||||||    
T  31598732 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 31598778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 23250648 - 23250591
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||| ||| |||||||  |||| |||| ||| ||||||||||||||||||    
T  23250648 gagggggtgcaagatctcacaattgacaaaagataggggaaaaagtgcaattaagcct 23250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 31598274 - 31598327
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||| ||||||||||||| ||||  ||||||| | |||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagatagagggaaaaatacaattaagcct 31598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 33499492 - 33499537
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttc 209  Q
    |||||||||  |||||||||| || |||||||||||||||||||||    
T  33499492 gttggcttgggatcttggagtttgctcctctcaaggtctcaggttc 33499537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 9208281 - 9208317
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||| || |||||||||||||||||||||||    
T  9208281 atcttggagtttgctcctctcaaggtctcaggttcga 9208317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 33972050 - 33971994
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||||||  ||||||| |||| |||| ||| |||| ||||||||||||    
T  33972050 gagggggtgcaaaatcgtacaattaacaaaagataggggaaaaactgcaattaagcc 33971994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 3930477 - 3930542
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaattta 145  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  3930477 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcctacaattta 3930542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 16555572 - 16555512
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataa-ggggaaaagtgcaattaagcctaa 139  Q
    |||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  16555572 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcctaa 16555512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 8488479 - 8488534
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagc 135  Q
    |||||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||    
T  8488479 gagggggtgcaaaatcgcacaattagaaaaagataaggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 16555817 - 16555871
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataa-ggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  16555817 ggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 13017747 - 13017792
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttc 209  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  13017747 gttggcttggaatcttgaagtgtgttcctctcaaggtctcaggttc 13017792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 35393773 - 35393830
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| || ||||||||||||| |||| || |||||||||||||||||||    
T  35393773 gagggggtgcaaattcgcacaattagcaaaagatagggtgaaaagtgcaattaagcct 35393830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 11241661 - 11241717
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaa 139  Q
    ||||||||||||| ||||||| ||||| |||| |||||||||| |||||||||||||    
T  11241661 ggggtgcaaaatcccacaattggcaaaagatagggggaaaagtacaattaagcctaa 11241717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 9023298 - 9023239
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| |||||| ||| ||| |||||||||||||||||||||||    
T  9023298 ggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcctaaaa 9023239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 4088266 - 4088320
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    |||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||||    
T  4088266 gtgttggcttgaaaccttggagggtggtcctttcaaggtctcaggttcgattctc 4088320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 13198903 - 13198961
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| |||||||| |||| ||||  ||||||||||||||||||||||    
T  13198903 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 13198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 18077199 - 18077257
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcct 137  Q
    |||||||||||||||| |||||||||||||  ||| ||| |||||||||||||||||||    
T  18077199 gagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcct 18077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 26207414 - 26207360
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||    
T  26207414 ggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcct 26207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 11241446 - 11241389
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagg-ggaaaagtgcaattaagcc 136  Q
    |||||| ||||||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  11241446 gaggggatgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 37980199 - 37980146
Alignment:
Q  163 tgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    ||||||||||  | ||||||||||| ||||||||||||||||||||||| ||||    
T  37980199 tgttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctc 37980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 47183345 - 47183394
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  47183345 gtgttggcttgagaccttggagtgtgatcctctcaagatctcaggttcga 47183394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 56409975 - 56410028
Alignment:
Q  163 tgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    ||||||||||  | ||||||||||| ||||||||||||||||||||||| ||||    
T  56409975 tgttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctc 56410028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 23539893 - 23539834
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaatt 143  Q
    ||||||||||||| ||||||| |||||| || ||||| |||||||||||||||||| ||||    
T  23539893 ggggtgcaaaatcgcacaattggcaaactat-agggggaaagtgcaattaagcctataatt 23539834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 27304773 - 27304718
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||||||| | ||| |||||||||| |||||||||||    
T  27304773 gagggggtgcaaaatcgcacaattagcagaagat-aggggaaaagggcaattaagcc 27304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 39744465 - 39744529
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaatttaa 146  Q
    ||||||||||||| |||||||  ||||| ||| |||| |||||||||||||||||||||| ||||    
T  39744465 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctaaaaattaa 39744529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 50678833 - 50678777
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||    
T  50678833 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 50678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 56505747 - 56505691
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| ||||| |||| |||| |||||||||||||||||||    
T  56505747 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 56505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 22681631 - 22681576
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagc 135  Q
    |||||||||||||||| |||||||  |||| |||| |||| |||||||||||||||    
T  22681631 gagggggtgcaaaatcgcacaattgacaaaagataggggggaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 28196773 - 28196828
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||||    
T  28196773 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 28196828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 32703650 - 32703709
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||| ||||    
T  32703650 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaaa 32703709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 37492755 - 37492716
Alignment:
Q  177 cttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  37492755 cttggagtgtgatcctctcaaggtctcaggttcgactctc 37492716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 43051252 - 43051307
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcct 137  Q
    ||||||||||||||||||||| ||||| |||| ||| ||||| |||||||||||||    
T  43051252 ggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcct 43051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 47219203 - 47219262
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcctaaaatt 143  Q
    ||||||||||| ||||||||||||| |||| ||| ||||| ||||||||| |||||||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaaacctaaaatt 47219262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 4239366 - 4239420
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||    
T  4239366 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 4686180 - 4686134
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    |||||||||||| | ||||||||||| ||||||||| ||||||||||    
T  4686180 gtgttggcttgagaccttggagtgtgctcctctcaatgtctcaggtt 4686134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 13198660 - 13198606
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgat-aaggggaaaagtgcaattaa 133  Q
    |||||||||||||||| ||||||| ||||| ||| |||| |||||||||||||||    
T  13198660 gagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 25414267 - 25414221
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    |||||||||||| | ||||||||||| ||||||||| ||||||||||    
T  25414267 gtgttggcttgagaccttggagtgtgctcctctcaaagtctcaggtt 25414221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 29195113 - 29195175
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctct 219  Q
    |||| |||||||||||  | ||||||||||| ||||||||||||| || |||||| |||||||    
T  29195113 tggtggtgttggcttgggaccttggagtgtgctcctctcaaggtcgcaagttcgattctctct 29195175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 48406015 - 48405961
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||  || |||| |||||| ||| ||||||||||||||||||||||    
T  48406015 ggggtgcaaaattgcataattggcaaactatagggggaaaagtgcaattaagcct 48405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 169068 - 169012
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg--gaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||  |||||||||||||||||||    
T  169068 ggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcct 169012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 8182049 - 8181992
Alignment:
Q  80 gagggggtgcaaaatcacacaattagc-aaacgataagggg-aaaagtgcaattaagc 135  Q
    |||||||||||||||| ||||||| || |||||||| |||| ||||||||||||||||    
T  8182049 gagggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 9380744 - 9380797
Alignment:
Q  86 gtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    |||||||||| ||||||| |||||| ||| |||| |||||||||||||||||||    
T  9380744 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 9380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 11529222 - 11529169
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagg-ggaaaagtgcaattaagc 135  Q
    ||||||||||||||||||||| ||||| | || || ||||||||||||||||||    
T  11529222 ggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 25161932 - 25161879
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagc 135  Q
    ||||||||||||| ||||||| |||||| |||  ||||||||||||||||||||    
T  25161932 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 28196400 - 28196343
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaa 139  Q
    ||||||||||||| ||||||| |||||  ||| |||| ||||||||||||||||||||    
T  28196400 ggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcctaa 28196343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 49178813 - 49178866
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaatta 132  Q
    |||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||    
T  49178813 gagggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 3930235 - 3930179
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| || |||||  ||| |||| ||| |||||||||||||||||    
T  3930235 gagggggtgcaaaatcgcataattaataaaagataggggaaaaagtgcaattaagcc 3930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 19220562 - 19220598
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  19220562 atcttggagtgtgctcctctcaaggtttcaggttcga 19220598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 27908542 - 27908574
Alignment:
Q  177 cttggagtgtgttcctctcaaggtctcaggttc 209  Q
    |||||||||||||||||||||||||||| ||||    
T  27908542 cttggagtgtgttcctctcaaggtctcaagttc 27908574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 39086625 - 39086677
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcc 136  Q
    ||||||||||| ||||||| |||||| ||| ||| ||||||||||||||||||    
T  39086625 ggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaagcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 40252316 - 40252368
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    |||| |||| |||||||||||||| | |||||||||||||| |||||| ||||    
T  40252316 gttgacttggaatcttggagtgtgcttctctcaaggtctcaagttcgattctc 40252368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 41621775 - 41621735
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctca 204  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  41621775 gttggcttgagatcttggagtttgctcctctcaaggtctca 41621735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 33628496 - 33628397
Alignment:
Q  35 gatggggtgcaaaataagaaagggtgcaaaatcactcnnnnnnnngagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaag 134  Q
    ||||||||||||||| ||||||||||||||||| |||        |||||| ||||||||  ||||||||||||| ||||||| ||||||||||||||||    
T  33628496 gatggggtgcaaaatcagaaagggtgcaaaatcgctcaaaaaaaagaggggatgcaaaattgcacaattagcaaaagataaggagaaaagtgcaattaag 33628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 13772847 - 13772964
Alignment:
Q  31 caaagatggggtgcaaaataagaaagggtgcaaaatcactcnnnnnnnn--gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgc 127  Q
    ||||||||||||| ||||| ||||||||||||||||| |||          |||||||||||||||| ||||||||||||| ||||  ||||||||||||    
T  13772847 caaagatggggtgaaaaattagaaagggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgc 13772946  T
Q  128 aattaagcctaaaattta 145  Q
    ||||||||| ||||||||    
T  13772947 aattaagccaaaaattta 13772964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 13772695 - 13772638
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagg-ggaaaagtgcaattaagcctaa 139  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcctaa 13772638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 9412080 - 9412022
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataa-ggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||    
T  9412080 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcct 9412022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 6908265 - 6908208
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||| |||||||| |||  |||| ||||||||||||||||||||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggggaaaagtgcaattaagcctaaaa 6908208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 9412322 - 9412383
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaa 140  Q
    |||||||||||||||| ||||||| ||||| |||| |||| |||||||||||||||||||||    
T  9412322 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctaaa 9412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 35080012 - 35079960
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||| | ||||||||||||| |||| |||||||||||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagatagggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 1469134 - 1469181
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  1469134 gttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcga 1469181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 8953886 - 8953941
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagc 135  Q
    |||||||||||||||  |||||||| |||| |||| ||||||||||||||||||||    
T  8953886 gagggggtgcaaaattgcacaattaacaaaagatagggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 40332121 - 40332168
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||||    
T  40332121 gttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcga 40332168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 13744233 - 13744287
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| |||||||  ||||| ||| ||||||||||||||||||||||    
T  13744233 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 13744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 3687411 - 3687347
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata--aggggaaaagtgcaattaagcctaaaat 142  Q
    |||||||||||||||| |||||||| |||| ||||   ||||||||||||||||||||| |||||    
T  3687411 gagggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagccaaaaat 3687347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 3687653 - 3687710
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||| ||||| ||||  |||||||||||||||||||||    
T  3687653 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 18864404 - 18864457
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    ||||||||||| ||||||| |||||| ||| |||||||||| ||||||||||||    
T  18864404 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 23686473 - 23686416
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||   |||||||||||| |||| ||||||||||||||||||||| ||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagatagggggaaaagtgcaattaagccaaaaa 23686416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 23686723 - 23686776
Alignment:
Q  89 caaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||| ||||||||||||| |||| |||| ||||||||||||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcctaaaa 23686776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 27096339 - 27096392
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    |||||| |||||||||||||||||  |||| |||| ||||||||||||||||||    
T  27096339 gaggggatgcaaaatcacacaattgacaaaagatagggggaaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 27181964 - 27181911
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    |||||| |||||||||||||||||  |||| |||| ||||||||||||||||||    
T  27181964 gaggggatgcaaaatcacacaattgacaaaagatagggggaaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 44599543 - 44599482
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaatt 143  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||| ||||||    
T  44599543 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaatt 44599482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 48359373 - 48359320
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| |||||||  ||||| ||| |||||||||||||||||||||    
T  48359373 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 10533088 - 10533032
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||||    
T  10533088 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 15567221 - 15567257
Alignment:
Q  31 caaagatggggtgcaaaataagaaagggtgcaaaatc 67  Q
    ||||||||||||||||||| |||||||||||||||||    
T  15567221 caaagatggggtgcaaaatcagaaagggtgcaaaatc 15567257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 37888887 - 37888827
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaat 142  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||| |||||    
T  37888887 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaaat 37888827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 37889259 - 37889315
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||||    
T  37889259 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 37889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 42419028 - 42419084
Alignment:
Q  82 gggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    |||||||||||| | ||||||| |||||| ||| |||||||||||||||||| ||||    
T  42419028 gggggtgcaaaaacgcacaattggcaaactatagggggaaaagtgcaattaaaccta 42419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 13863367 - 13863308
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||||| |||||||||||||||||    
T  13863367 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctaaaa 13863308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 16198977 - 16199032
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataa-ggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| |||| ||| ||||||||||||||||||    
T  16198977 ggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcct 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 20418942 - 20418883
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||| |||||||    
T  20418942 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacctaaaa 20418883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 37972396 - 37972451
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||||    
T  37972396 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37972451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 44600135 - 44600190
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||||    
T  44600135 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9035293 - 9035347
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| |||||| |||  |||||||||||||||||||||    
T  9035293 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 21050195 - 21050141
Alignment:
Q  160 ttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatc 214  Q
    |||||| ||||||| | ||||||||||| |||||||||||||||| || ||||||    
T  21050195 ttgtgtaggcttgagaccttggagtgtgctcctctcaaggtctcaagtacgaatc 21050141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 22740591 - 22740641
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    ||||||||||||| |||||||  ||||| ||| ||||||||||||||||||    
T  22740591 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 3204721 - 3204669
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| |||||| || ||||| ||||||||||||||||    
T  3204721 ggggtgcaaaatcgcacaattggcaaactat-agggggaaagtgcaattaagcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    |||||||||||| |||||||||||||  ||| |||| |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 9034922 - 9034861
Alignment:
Q  82 gggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaat 142  Q
    ||||||||| |||| ||||||| |||||  ||| |||| |||||||||||||||||||||||    
T  9034922 gggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagcctaaaat 9034861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 18847480 - 18847427
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcg 210  Q
    |||| |||||||||||| ||||| ||||||| |||||||||| ||||| |||||    
T  18847480 tggtggtgttggcttgagatcttcgagtgtgctcctctcaagatctcaagttcg 18847427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 22696353 - 22696386
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    ||||||||||||| ||||||||||||||||||||    
T  22696353 atcttggagtgtgctcctctcaaggtctcaggtt 22696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 37972014 - 37971957
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaa 139  Q
    ||||||||||||| ||||||| |||||| | | ||| |||||||||||||||||||||    
T  37972014 ggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagcctaa 37971957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 18925322 - 18925373
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagc 135  Q
    ||||||||||||| |||||||||||||  || || ||||||||||||||||||    
T  18925322 ggggtgcaaaatcgcacaattagcaaaatat-agaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 27096094 - 27096042
Alignment:
Q  89 caaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    ||||||| |||||||||||||  ||| |||| |||||||||||||||| ||||    
T  27096094 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagccaaaaa 27096042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 27182209 - 27182261
Alignment:
Q  89 caaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    ||||||| |||||||||||||  ||| |||| |||||||||||||||| ||||    
T  27182209 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagccaaaaa 27182261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 28647002 - 28647038
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||||| | |||||||||||||||||||||    
T  28647002 atcttggagtgtgcttctctcaaggtctcaggttcga 28647038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 33628660 - 33628716
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||||| ||| |||| |||| |||||||||||| ||||||    
T  33628660 ggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagccta 33628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 35080223 - 35080263
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaa 123  Q
    ||||||||||||| |||||||| |||| |||||||||||||    
T  35080223 ggggtgcaaaatcgcacaattaacaaaagataaggggaaaa 35080263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 13589656 - 13589713
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  13589656 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 13589713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 17518359 - 17518298
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||    
T  17518359 gagggggtgcaaaatcgcacaattaacaaaagataaggggaaaggtgcaattaagcctaaaa 17518298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 1138597 - 1138652
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctct 219  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  1138597 gttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctct 1138652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 17518599 - 17518653
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaag 134  Q
    |||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||    
T  17518599 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 20371352 - 20371406
Alignment:
Q  82 gggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||    
T  20371352 gggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 27172169 - 27172111
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| ||||    
T  27172169 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccaaaaa 27172111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 41083208 - 41083266
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    |||||||||||||||| ||||| || |||| |||| |||||||||||||||||||||||    
T  41083208 gagggggtgcaaaatcgcacaactaacaaaagatagggggaaaagtgcaattaagccta 41083266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 22149458 - 22149402
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| |||||||| |||| |||| ||||||||||||||||||||||    
T  22149458 gagggggtgcaaaatcgcacaattaccaaa-gatagggggaaaagtgcaattaagcct 22149402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 20480613 - 20480665
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||||| ||||||| |||||| ||| |||||||||||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 20480221 - 20480167
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| |||||||  ||||| ||| ||||||||||||||||||||||    
T  20480221 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 20480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 47955363 - 47955305
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||||    
T  47955363 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 47955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 48105116 - 48105170
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataa-ggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| |||||| |||| |||||||||||||||||||||    
T  48105116 ggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 9347180 - 9347115
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaatttaag 147  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||| ||||| ||||    
T  9347180 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaaatataag 9347115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 23439914 - 23439877
Alignment:
Q  177 cttggagtgtgttcctctcaaggtctcaggttcgaatc 214  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  23439914 cttggagtgtgttcctctcaatgtctcaggttcgaatc 23439877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 34228892 - 34228953
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctc 218  Q
    |||| |||||||||||  | || ||||||||||||||||||||||||||||| || ||||||    
T  34228892 tggtggtgttggcttgggacctcggagtgtgttcctctcaaggtctcaggttggattctctc 34228953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 50615621 - 50615674
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| |||||||  ||||| ||| |||||||||||||||||||||    
T  50615621 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 50623449 - 50623502
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| |||||||  ||||| ||| |||||||||||||||||||||    
T  50623449 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 24217007 - 24217043
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24217007 atcttggagtgtgctcctctcaaggtctcaggttcga 24217043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 28633774 - 28633718
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    |||||||||||||  |||||| |||||| |||||||| |||||||||||||||||||    
T  28633774 ggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagccta 28633718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 32163043 - 32163099
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||||    
T  32163043 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 999529 - 999580
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    ||||||||| ||||||| |||| | ||| |||||||||||||||||||||||    
T  999529 tgcaaaatcgcacaattggcaatctatagggggaaaagtgcaattaagccta 999580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 6002291 - 6002232
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||||||||  |||| |||| ||| |||||||||||||||||| ||||    
T  6002291 ggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagccaaaaa 6002232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 8108993 - 8109048
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| ||||| |||| |||| ||||||||||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 9347551 - 9347606
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    ||||||||||||  ||||||| |||||| ||| |||| ||||||||||||||||||    
T  9347551 ggggtgcaaaattgcacaattggcaaactataggggggaaagtgcaattaagccta 9347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 31848189 - 31848248
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagccta 138  Q
    ||||||||||||||||  ||||||| |||| |||| ||| ||||||||||||||||||||    
T  31848189 gagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagccta 31848248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 33700823 - 33700768
Alignment:
Q  165 ttggcttgaaatcttggagtgtgttcctc-tcaaggtctcaggttcgaatctctct 219  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||||| |||||||    
T  33700823 ttggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 33700768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 37047003 - 37047054
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    |||| |||||||||||  | ||||||||||| ||||||||||||||||||||    
T  37047003 tggtggtgttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 37047054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 47955605 - 47955664
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    |||||||||||||||| ||||||||  ||| |||| |||| |||||||||||||||||||    
T  47955605 gagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 48190825 - 48190766
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||| ||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaa 48190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 49284463 - 49284408
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||||    
T  49284463 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 49284408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 8108777 - 8108719
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgataagg-ggaaaagtgcaattaagccta 138  Q
    ||||||||||||||| |||||||| |||| |||| || |||||||||||||||| ||||    
T  8108777 agggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaaccta 8108719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 39964528 - 39964574
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    |||||||||||  | ||||||||||| ||||||||||||||||||||    
T  39964528 gtgttggcttgcgaccttggagtgtgctcctctcaaggtctcaggtt 39964574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 43983743 - 43983701
Alignment:
Q  177 cttggagtgtgttcctctcaaggtctcaggttcgaatctctct 219  Q
    |||||||||||||||||||||||| |||||| ||| |||||||    
T  43983743 cttggagtgtgttcctctcaaggtttcaggtacgattctctct 43983701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 1176766 - 1176717
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||| |||||||||||||  ||| |||| ||||||||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 2799890 - 2799943
Alignment:
Q  167 ggcttgaaatcttggagtgtgttcctc-tcaaggtctcaggttcgaatctctct 219  Q
    ||||||| |||| |||||||| ||||| |||||||||||||||||| |||||||    
T  2799890 ggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 2799943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 19007783 - 19007734
Alignment:
Q  88 gcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||| ||||||| |||||| ||| |||| |||||||||||||||||    
T  19007783 gcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcct 19007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 22149701 - 22149750
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaa 133  Q
    ||||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 40810503 - 40810548
Alignment:
Q  175 atcttggagtgtgttcctct-caaggtctcaggttcgaatctctct 219  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  40810503 atctgggagtgtgttcctcttcaaggtctcaggttcgattctctct 40810548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 41470663 - 41470614
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||||| | |||||||| || |||||||||||||||| ||||||    
T  41470663 gtgttggcttgagaccttggagtatgctcctctcaaggtctcaagttcga 41470614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 42611237 - 42611188
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataa-ggggaaaagtgcaattaa 133  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||||||||||    
T  42611237 ggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 47360551 - 47360514
Alignment:
Q  177 cttggagtgtgttcctctcaaggtctcaggttcgaatc 214  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  47360551 cttggagtgtgctcctctcaagatctcaggttcgaatc 47360514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 49317801 - 49317752
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||  ||||||| |||||| ||| |||||||||||||||||||||    
T  49317801 tgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 49318170 - 49318219
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||| ||||||| |||||| ||| |||| ||||||||||||||||    
T  49318170 tgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 49318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 50429708 - 50429655
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgat-aaggggaaaagtgcaattaagcct 137  Q
    ||||||||||| |||||||||||||  || |||||||||||| |||||||||||    
T  50429708 ggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcct 50429655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 3334793 - 3334841
Alignment:
Q  163 tgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||| ||||| ||||||| || ||||||||||||| ||||||    
T  3334793 tgttggcttgagatcttagagtgtgctcttctcaaggtctcaagttcga 3334841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 15581199 - 15581147
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttc 209  Q
    |||| |||||||||||  | ||||||||||| |||||| ||||||||||||||    
T  15581199 tggtggtgttggcttgggaccttggagtgtgctcctctaaaggtctcaggttc 15581147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 26814748 - 26814688
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagg-ggaaaagtgcaattaagcctaaaat 142  Q
    ||||||||||||| |||||||  ||||| ||| || ||||||||||||||||||| |||||    
T  26814748 ggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagccaaaaat 26814688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 39714829 - 39714789
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctca 204  Q
    |||||||||  ||||||||||||| ||||||||||||||||    
T  39714829 gttggcttgggatcttggagtgtgctcctctcaaggtctca 39714789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 47498495 - 47498547
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagc 135  Q
    ||||||||||| | |||||||  ||||| ||| ||||||||||||||||||||    
T  47498495 ggggtgcaaaaccgcacaattgacaaactatagggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 48191355 - 48191411
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagccta 138  Q
    ||||||||||||| ||| ||| ||||| |||| ||| ||||||||||||||||||||    
T  48191355 ggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagccta 48191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 50526472 - 50526524
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaag 134  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||    
T  50526472 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 6694 - 6750
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  6694 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 6451 - 6393
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||    
T  6451 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 45804 - 45863
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaa 139  Q
    |||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||    
T  45804 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaagcctaa 45863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 45593 - 45536
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||| |||||||||| |||||||| |||| |||| ||||||||||||||||||||||    
T  45593 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 22429196 - 22429259
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaatttaa 146  Q
    ||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||| ||||||    
T  22429196 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagcctaagatttaa 22429259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 37610255 - 37610201
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  37610255 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcct 37610201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 37780373 - 37780319
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  37780373 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcct 37780319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 22428987 - 22428930
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaa 140  Q
    ||||||||||||| ||||||||||||| |||| |||| ||||||||||||||||||||    
T  22428987 ggggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagcctaaa 22428930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 23011131 - 23011074
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaatgcaattaagccaaaaa 23011074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 34577164 - 34577217
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  34577164 ggggtgcaaaatcacacaattagcaaaagataggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 16173041 - 16172982
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    |||| |||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||    
T  16173041 tggtagtgttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgattctc 16172982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 25175148 - 25175211
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaat 142  Q
    |||||||||||||||| |||||||| |||| |||| |||| |||||||||||||||||||||||    
T  25175148 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaaaat 25175211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 14656701 - 14656647
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||||||||| | |||||||| || |||||||||||||||||||||||    
T  14656701 tggttgtgttggcttgagaccttggagtttgctcctctcaaggtctcaggttcga 14656647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 25115813 - 25115755
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagccta 138  Q
    ||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||    
T  25115813 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 25174905 - 25174847
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagccta 138  Q
    ||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||    
T  25174905 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 43463809 - 43463759
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  43463809 ggggtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 5187828 - 5187889
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||||  |||||||| |||| ||||||||| ||||||||||||||||||||||    
T  5187828 agggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcctaaaa 5187889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 25116060 - 25116121
Alignment:
Q  82 gggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaat 142  Q
    |||||||||||||| |||||||| |||| |||| |||| |||||||||||||||||||||||    
T  25116060 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaaaat 25116121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 12498621 - 12498557
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaatttaa 146  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||||||| ||||    
T  12498621 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaaaaattaa 12498557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 43464194 - 43464250
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||| |||||||  ||||| ||| ||||||||||||||||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcctaaaa 43464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 26020504 - 26020449
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagg-ggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||    
T  26020504 ggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcct 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 18433069 - 18433015
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||    
T  18433069 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 18433313 - 18433371
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| |||||||| |||| ||||  ||||||||||||||||||||||    
T  18433313 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 41383167 - 41383221
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| |||||||||||||  ||| |||||||||| |||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaatagggggaaaagttcaattaagcct 41383221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 12498928 - 12498985
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaa 139  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||||||    
T  12498928 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaa 12498985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 23011383 - 23011432
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    |||||||||||| |||||||| |||| |||||||| ||||||||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagataagggaaaaagtgcaattaa 23011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 26571164 - 26571221
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaa 139  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||||||    
T  26571164 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaa 26571221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 37610620 - 37610677
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaat 142  Q
    ||||||||||| |||||||||||||| ||| |||| ||||| |||||||||| |||||    
T  37610620 ggtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaagccaaaaat 37610677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 8780507 - 8780543
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8780507 atcttggagtgtgctcctctcaaggtctcaggttcga 8780543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 18817006 - 18816946
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaat 142  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||||| ||||||||||||||||||    
T  18817006 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctaaaat 18816946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 22729440 - 22729492
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagc 135  Q
    ||||||||||||| ||||||| |||||  ||| ||||||||||||||||||||    
T  22729440 ggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 5005773 - 5005819
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttc 209  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||    
T  5005773 gtgttagcttgagatcttggagtgtgtt-ctctcaaggtctcaggttc 5005819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 15485470 - 15485423
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||  | ||||||||||| |||||||||||||||||||||||    
T  15485470 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcga 15485423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 16466746 - 16466801
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||| |||||||||||||  ||| |||| ||||||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcctaaaa 16466801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 33324835 - 33324894
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagccta 138  Q
    ||||||||||||||||||||||||  |||| |||| |||  |||||||||||||||||||    
T  33324835 gagggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagccta 33324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 9665609 - 9665560
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    ||||||||||||  ||||||||||||| ||| |||||||||||||||||||    
T  9665609 ggggtgcaaaattgcacaattagcaaaagat-aggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 9665828 - 9665885
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaat 142  Q
    |||||||||||  ||||||||||||| |||| ||||||||||| ||||||||| |||||    
T  9665828 gggtgcaaaatg-cacaattagcaaaagatagggggaaaagtggaattaagccaaaaat 9665885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 18817611 - 18817665
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||    
T  18817611 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 22729058 - 22729008
Alignment:
Q  86 gtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||| |||||||  ||||| ||| |||||||||||||||||||||    
T  22729058 gtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 34576920 - 34576870
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    |||||| |||||| ||||||||||||| |||| |||| |||||||||||||    
T  34576920 ggggtgtaaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 37780744 - 37780802
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcctaaaat 142  Q
    ||||||||||| |||||||||||||| |||  |||||||||| |||||||||| |||||    
T  37780744 ggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagccaaaaat 37780802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 12441320 - 12441364
Alignment:
Q  91 aaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagata-ggggaaaagtgcaattaagcc 12441364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 31569958 - 31569905
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    ||||||||||| |||||||  |||| |||| |||||||||||||||||| ||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaaaccta 31569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 32340374 - 32340337
Alignment:
Q  177 cttggagtgtgttcctctcaaggtctcaggttcgaatc 214  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  32340374 cttggagtgtgctcctctcaaggtcttaggttcgaatc 32340337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 2817582 - 2817626
Alignment:
Q  90 aaaatcacacaattagcaaacgataaggggaaaagtgcaattaag 134  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||    
T  2817582 aaaatcgcacaattcgcaaactatagggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 47871121 - 47871176
Alignment:
Q  82 gggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  47871121 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 47871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 26158833 - 26158880
Alignment:
Q  161 tgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  26158833 tgtgttggcttgagatcttggagtgtgctcctctcaaggtctcaggtt 26158880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 14015964 - 14016026
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaattta 145  Q
    ||||||||||||| ||||||||||||| |||| |  ||||||||||||||| |||||||||||    
T  14015964 ggggtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaaacctaaaattta 14016026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 42627550 - 42627599
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  42627550 tgcaaaatcacacaattagcaaaagatagagggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 42673031 - 42672978
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||    
T  42673031 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 34844395 - 34844443
Alignment:
Q  163 tgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  34844395 tgttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcga 34844443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 40848961 - 40849017
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||    
T  40848961 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagccta 40849017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 42673296 - 42673356
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaatt 143  Q
    ||||||||||||| |||||||  ||||| ||| ||||||||||||||||||||| ||||||    
T  42673296 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccaaaaatt 42673356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 42799805 - 42799746
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    |||| |||||||||||  | ||||||||||| ||||||||||||||||||||||| ||||    
T  42799805 tggtggtgttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgactctc 42799746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 10293906 - 10293968
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||| |||||||| |||| ||||  ||||||||||||||||||||| ||||    
T  10293906 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccaaaaa 10293968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 18875188 - 18875250
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||||||  |||||||||||| |||| |||| ||||||||||||||||| ||||    
T  18875188 gagggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcccaaaa 18875250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 24485460 - 24485518
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| |||||| ||| || |||||||||||||||||| ||||    
T  24485460 ggggtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaagccaaaaa 24485518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 27238900 - 27238962
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcctaaaattt 144  Q
    ||||||||||||| ||||||| |||||| ||| ||||||||||||||||||| || |||||||    
T  27238900 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaaccaaaaattt 27238962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 40848574 - 40848520
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||| |||||| ||||||| |||||| ||| ||||||||||||||||||||||    
T  40848574 ggggtgtaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 40848520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 3353181 - 3353128
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| |||||||  ||||| ||| |||||||||||||||||||||    
T  3353181 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 28835025 - 28834972
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatct 215  Q
    |||||||||||  | |||||||||| ||||||||||||||||| ||||||||||    
T  28835025 gtgttggcttgtgaccttggagtgtcttcctctcaaggtctcaagttcgaatct 28834972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 47665963 - 47665906
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||||| |||||||  ||||| |||||||| ||||||||||||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcctaaaa 47665906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 4252575 - 4252535
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctca 204  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  4252575 gttggcttgagatcttggagtgtgctcctctcaaggtctca 4252535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 17372354 - 17372298
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgataaggggaaaa-gtgcaattaagcc 136  Q
    ||||||||||||||| |||||||||||||  ||| |||||||| |||||||||||||    
T  17372354 agggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 27238518 - 27238458
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataag-gggaaaagtgcaattaagcctaaaatt 143  Q
    |||||||||||| ||||||| |||||| ||| | ||||||||| |||||||||||||||||    
T  27238518 gggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagcctaaaatt 27238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 44069776 - 44069828
Alignment:
Q  157 tggttgtgttggcttgaaatcttggagtgtgttcct-ctcaaggtctcaggtt 208  Q
    |||| |||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  44069776 tggtggtgttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtt 44069828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 48159951 - 48159895
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||||    
T  48159951 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 48159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 17372594 - 17372652
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaat 142  Q
    ||||||||||||| ||||||||| |||  ||| |||||||||||||||||||| ||||||    
T  17372594 ggggtgcaaaatcgcacaattagtaaaatata-ggggaaaagtgcaattaagcttaaaat 17372652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 18874935 - 18874880
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    |||||||||||| ||||||||||||| |||| |||| |||||||||||| ||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagccta 18874880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 45060872 - 45060927
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagccta 138  Q
    ||||| |||||| ||||||||||||| |||| ||| ||||||||||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagccta 45060927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 20968775 - 20968717
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| |||||||| |||| ||||  ||||||| ||||||||||||||    
T  20968775 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaagcct 20968717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 20969019 - 20969073
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| ||||| ||||  |||||||||||||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 1101182 - 1101247
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaatttaaga 148  Q
    ||||| |||||| |||||  |||||| ||||||||| ||||||||||||||||||| || ||||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagcctagaaattaaga 1101247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 3353553 - 3353606
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    ||||||||||| ||||||| |||||| ||| |||||||||||||| ||| ||||    
T  3353553 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaactaaaccta 3353606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9027033 - 9027086
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||| |||||  ||||||||||||| |||| ||||||||||| |||||||||    
T  9027033 ggggtgtaaaattgcacaattagcaaaagatagggggaaaagtgaaattaagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 21895712 - 21895652
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata--aggggaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||||||||||| |||||  |||   ||| ||||||||||||||||||||||    
T  21895712 ggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcctaaaa 21895652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 35623319 - 35623270
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||||  | ||||||||||| |||||||||||||||| ||||||    
T  35623319 gtgttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcga 35623270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 36180990 - 36181047
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagg-ggaaaagtgcaattaagcctaa 139  Q
    ||||| ||||||| |||||||| ||||| ||| || ||||||||||||||||||||||    
T  36180990 ggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcctaa 36181047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 40777052 - 40777093
Alignment:
Q  178 ttggagtgtgttcctctcaaggtctcaggttcgaatctctct 219  Q
    |||||||||| |||||||||||||||||||| || |||||||    
T  40777052 ttggagtgtgctcctctcaaggtctcaggtttgattctctct 40777093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 47454667 - 47454615
Alignment:
Q  165 ttggcttgaaatcttggagtgtgttcct-ctcaaggtctcaggttcgaatctc 216  Q
    ||||||||| ||||||||||||| |||| ||| ||||||||||||||| ||||    
T  47454667 ttggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 47870877 - 47870821
Alignment:
Q  83 ggggtgcaaaat-cacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    |||||||||||| | || |||||||||| |||| ||| |||||||||||||||||||    
T  47870877 ggggtgcaaaattcgcataattagcaaaagataggggaaaaagtgcaattaagccta 47870821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 53863919 - 53863863
Alignment:
Q  163 tgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctct 219  Q
    ||||||||||  | ||||||||||| |||||||||||||| |||||| | |||||||    
T  53863919 tgttggcttgggaccttggagtgtgctcctctcaaggtcttaggttcaattctctct 53863863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 43246173 - 43246231
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  43246173 gagggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcct 43246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 12281423 - 12281485
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataa-ggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||| ||||    
T  12281423 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccaaaaa 12281485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 23123514 - 23123567
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaag 134  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  23123514 gagggggtgcaaaatcgcacaattagcaaaagataagggg-aaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 16928999 - 16928938
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcctaaa 140  Q
    |||||||||||||||| ||||||||||||| ||||  |||| ||||||||||||||||||||    
T  16928999 gagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagcctaaa 16928938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 16929239 - 16929296
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||||||||| |||| ||| ||||||||||||||||||    
T  16929239 gagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34313820 - 34313760
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||| |||||||| |||| |||| ||||||||||||||||||||| ||||    
T  34313820 gagggggtgcaaaatcgcacaattaacaaaagata-ggggaaaagtgcaattaagccaaaaa 34313760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 15155940 - 15155880
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaa 139  Q
    |||||||||||||||| |||||||| |||| |||| |||| ||||||||||||||||||||    
T  15155940 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaa 15155880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 24473397 - 24473338
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||| ||||    
T  24473397 ggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagccaaaaa 24473338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 33748033 - 33747982
Alignment:
Q  87 tgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    ||||||||||||||||||||||| |||| ||  |||||||||||||||||||    
T  33748033 tgcaaaatcacacaattagcaaaagatatggaaaaaagtgcaattaagccta 33747982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 41662164 - 41662101
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaa-gtgcaattaagcctaaaat 142  Q
    |||||||||||||||| |||||||| |||| |||| |||||||| |||||||||||||| ||||    
T  41662164 gagggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagccttaaat 41662101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 13936776 - 13936722
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| | ||| |||| ||||||||||||||||||||||    
T  13936776 ggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcct 13936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 15042198 - 15042140
Alignment:
Q  84 gggtgcaaaatcacacaattagcaaacgataa-ggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||||||    
T  15042198 gggtgcaaaatcacacaattggcaaaagataaggggggaaagtgcaattaaacctaaaa 15042140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 18020085 - 18020146
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaat 142  Q
    |||||||||||||||| |||||||| |||| ||| |||| |||||||||||||||||| ||||    
T  18020085 gagggggtgcaaaatcgcacaattaacaaaagat-agggtaaaagtgcaattaagccttaaat 18020146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 34498555 - 34498613
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaa 140  Q
    ||||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||||||    
T  34498555 ggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcctaaa 34498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 37752413 - 37752470
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| |||||||| |||| ||||  |||||||||||||||||||||    
T  37752413 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 41662400 - 41662457
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||| ||||| ||||  |||||||||||||||||||||    
T  41662400 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 43245928 - 43245871
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcc 136  Q
    |||||||||||||||| |||||||| |||| |||| |||| |||||||||||||||||    
T  43245928 gagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 7127708 - 7127660
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaa 129  Q
    ||||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  7127708 aggggatgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 13026687 - 13026631
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaa 140  Q
    ||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctaaa 13026631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 13027281 - 13027345
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaatttaa 146  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||| || |||||||||    
T  13027281 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccaaaaatttaa 13027345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 43162290 - 43162234
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||| ||||||||||| |||||||| ||||  ||| |||||||||||||||||||||    
T  43162290 gaggaggtgcaaaatcgcacaattaacaaaatatagggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 74739 - 74688
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaag 134  Q
    ||||||||||||| ||||||||||||| |||   ||||||||||||||||||    
T  74739 ggggtgcaaaatcgcacaattagcaaaagatggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 765791 - 765736
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaag 134  Q
    |||||||||||||||| ||||||| ||||| ||||  |||||||||||||||||||    
T  765791 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 9823361 - 9823416
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||||    
T  9823361 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 22786892 - 22786837
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaa 139  Q
    ||||||||||||||||||||| ||| |||| |||| |||||||||||||| |||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaaacctaa 22786837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 34639385 - 34639338
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||  ||||||||||||| |||||||||||||||||| ||||    
T  34639385 gttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcga 34639338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 39724048 - 39724107
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||| ||||    
T  39724048 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaa 39724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 40137016 - 40136969
Alignment:
Q  161 tgtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    ||||||||||||  | ||||||||||| ||||||||||||||||||||    
T  40137016 tgtgttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 40136969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 12281181 - 12281123
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcct 137  Q
    |||| ||||||||||| ||||||| ||||| |||| |||| ||||||||||||||||||    
T  12281181 gaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 37752138 - 37752084
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| |||||||||||||  |||  |||||||||||||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 767720 - 767761
Alignment:
Q  97 cacaattagcaaacgataaggggaaaagtgcaattaagccta 138  Q
    |||||||| |||| |||| |||||||||||||||||||||||    
T  767720 cacaattaacaaaagatagggggaaaagtgcaattaagccta 767761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9623882 - 9623935
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||||||| ||| |||||| ||| |  ||||||||||||||||||    
T  9623882 ggggtgcaaaatcacacgattggcaaactataggatgaaaagtgcaattaagcc 9623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 15156182 - 15156239
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcc 136  Q
    |||||||||||||||| |||||||  |||| |||| |||| |||||||||||||||||    
T  15156182 gagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 22779693 - 22779730
Alignment:
Q  177 cttggagtgtgttcctctcaaggtctcaggttcgaatc 214  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  22779693 cttggaatgtgctcctctcaaggtctcaggttcgaatc 22779730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 37396762 - 37396705
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaa 139  Q
    ||||||||||||| ||||||  |||||| ||| |||| ||||||||||||||||||||    
T  37396762 ggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagcctaa 37396705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 109
Target Start/End: Original strand, 37670128 - 37670157
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaa 109  Q
    ||||||||||||||||||||||||||||||    
T  37670128 gagggggtgcaaaatcacacaattagcaaa 37670157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 41662573 - 41662520
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcct 137  Q
    ||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||||    
T  41662573 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcct 41662520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 25438846 - 25438794
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaag 134  Q
    ||||||||||||| ||||||| |||||| |||  |||||||||||||||||||    
T  25438846 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 37397145 - 37397209
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaatttaa 146  Q
    |||| |||||||| ||||||| |||||| ||| |||| ||||||||||||||||| |||| ||||    
T  37397145 ggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaaaattaa 37397209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 43162536 - 43162588
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaatta 132  Q
    |||||||||||||||| ||| |||  |||| |||| |||||||||||||||||    
T  43162536 gagggggtgcaaaatcgcacgattgacaaaagatagggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 439196 - 439255
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    |||||| ||||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  439196 gaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagccta 439255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 438987 - 438930
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||    
T  438987 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 17346032 - 17346091
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaa 139  Q
    |||| ||||||||||| ||||||||||||| ||||| || ||||||||||||||||||||    
T  17346032 gaggaggtgcaaaatcgcacaattagcaaaagataaaggaaaaagtgcaattaagcctaa 17346091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 11883680 - 11883622
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||    
T  11883680 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 11883622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 11883923 - 11883980
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||    
T  11883923 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 26737537 - 26737481
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||    
T  26737537 gagggggtgcaaaatcgcacaattagcaaaagat-aggagaaaagtgcaattaagcct 26737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 18708506 - 18708542
Alignment:
Q  175 atcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||||||||||||||||||||||||||||||    
T  18708506 atcttggagtgtgttcctctcaaggtctcaggttcga 18708542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 5378715 - 5378656
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||||||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaaaa 5378656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 6171207 - 6171156
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||| |||||||| |||| |||| |||||||||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 8192530 - 8192483
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||||    
T  8192530 gttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcga 8192483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 24832385 - 24832330
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||    
T  24832385 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 24832330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 30190980 - 30190921
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagccta 138  Q
    |||||||||||||||| ||||||| ||||| ||||  |||||||||||||||||||||||    
T  30190980 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 30190921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 7980003 - 7980057
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| |||||||||||||| |||  || ||||||||||||||||||    
T  7980003 ggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaagcct 7980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 18055103 - 18055050
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaag 134  Q
    |||||||||||||||| ||||||||||||| | || |||||||||||||||||||    
T  18055103 gagggggtgcaaaatcgcacaattagcaaaag-tagggggaaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 20347461 - 20347519
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||||    
T  20347461 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 20347519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 26841641 - 26841583
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaa 140  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  26841641 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctaaa 26841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 40469726 - 40469780
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaa 133  Q
    |||||||||||||||| ||||||||||||| |||| |||| ||||||||||||||    
T  40469726 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 29230334 - 29230277
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||||||  |||| |||| || ||||||||||||||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagcctaaaa 29230277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 2639482 - 2639538
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||||||||    
T  2639482 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 2639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 6099569 - 6099517
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    |||||||||  | ||||||||||| ||||||||||||||||||||||| ||||    
T  6099569 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctc 6099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 20347217 - 20347161
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagccta 138  Q
    ||||||||||||| |||||||| |||| |||| |||||||||||| |||||||||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagccta 20347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 32673141 - 32673193
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    ||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||||    
T  32673141 agggggtgcaaaatcgcacaattggcaaaagataggggaaaaagtgcaattaa 32673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 40591201 - 40591245
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||    
T  40591201 gttggcttgagatcttggagtgtgctcctctcaaagtctcaggtt 40591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 4618864 - 4618817
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||| ||||||||||| || |||||||||||| ||||||||||    
T  4618864 gttggcttggaatcttggagtatgctcctctcaaggtttcaggttcga 4618817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 6171456 - 6171511
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| ||||| |||| |||| ||||||||||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcct 6171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 7979619 - 7979561
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaat 142  Q
    ||||||||||||| |||||||  ||||| ||||||| ||||||||||| |||||||||||    
T  7979619 ggggtgcaaaatcgcacaattgtcaaactataaggg-aaaagtgcaataaagcctaaaat 7979561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 17851032 - 17850973
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||| ||||    
T  17851032 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaaaa 17850973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 18296693 - 18296748
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 19606024 - 19605977
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    |||||||||  ||||||||||| | |||||||||||||||||||||||    
T  19606024 gttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcga 19605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 26692820 - 26692871
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaa 133  Q
    ||||||||||||| ||||||| |||||| ||| |||||||||||||||||||    
T  26692820 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 26737781 - 26737840
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggg-gaaaagtgcaattaagcctaaaa 141  Q
    ||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||| ||||    
T  26737781 ggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagccaaaaa 26737840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 37720258 - 37720203
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||||    
T  37720258 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 40221364 - 40221313
Alignment:
Q  85 ggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||||  |||||||||||| |||| ||||||| |||||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagatagggggaaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 26482116 - 26482170
Alignment:
Q  162 gtgttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctc 216  Q
    |||||||||||  | || |||||||| ||||||||||||||||||||||| ||||    
T  26482116 gtgttggcttgggacctaggagtgtgctcctctcaaggtctcaggttcgattctc 26482170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 28194311 - 28194257
Alignment:
Q  165 ttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcgaatctctct 219  Q
    ||||||||  ||||||||||||| |||||| ||||||| |||||||| |||||||    
T  28194311 ttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctct 28194257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 30191222 - 30191284
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||| ||||||||  ||| |||| |||| ||||||||||||||||| ||||    
T  30191222 gagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccaaaaa 30191284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 40469484 - 40469422
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataag-gggaaaagtgcaattaagcctaaaa 141  Q
    |||||||||||||||| ||||||||||||| |||| | ||||||| | |||||||||| ||||    
T  40469484 gagggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagccaaaaa 40469422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 16911269 - 16911326
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaa 140  Q
    ||||||||||||| ||||||| |||||| ||| |||  ||||||||||||||| ||||    
T  16911269 ggggtgcaaaatcgcacaattggcaaactataggggcgaaagtgcaattaagcttaaa 16911326  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 17345788 - 17345736
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    |||||||||||||||  || |||||||||| |||| ||||||||||||||||||    
T  17345788 gagggggtgcaaaattgcataattagcaaaagata-ggggaaaagtgcaattaa 17345736  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 18750126 - 18750183
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaa 140  Q
    ||||||||||||| |||||||  ||||| ||| ||||| |||||||||||||| ||||    
T  18750126 ggggtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaagcttaaa 18750183  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 5379959 - 5380015
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    ||||||||||||| ||||||| | |||| ||| |||| |||||||||||||||||||    
T  5379959 ggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagccta 5380015  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 8379448 - 8379404
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggtt 208  Q
    ||||||||||||||||| ||| | ||| |||||||||||||||||    
T  8379448 gttggcttgaaatcttgaagtctattcatctcaaggtctcaggtt 8379404  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 15321446 - 15321387
Alignment:
Q  81 agggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaa 141  Q
    ||||| ||||||||  |||||||| |||| |||| ||||||||||||||||||| ||||||    
T  15321446 aggggatgcaaaattgcacaattaacaaaagata-ggggaaaagtgcaattaagtctaaaa 15321387  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  85 ggtgcaaaatcacacaattagc-aaacgataa-ggggaaaagtgcaatt 131  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 41790912 - 41790972
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcctaaaat 142  Q
    |||| |||||||| ||||||| |||||  ||| |||| |||||||||||||||||||||||    
T  41790912 ggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcctaaaat 41790972  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 43495602 - 43495658
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||| ||||||||| |||||||||||||  ||| | || ||||||||||||||||    
T  43495602 gaggggatgcaaaatcgcacaattagcaaaatataggtgggaaagtgcaattaagcc 43495658  T

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Target: scaffold0192 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 25366 - 25424
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||    
T  25366 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 25424  T

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Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 50506 - 50560
Alignment:
Q  82 gggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||    
T  50506 gggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 50560  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 205743 - 205686
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    |||||||||||||||| ||||||||||||| |||| || ||||| |||||||||||||    
T  205743 gagggggtgcaaaatcgcacaattagcaaaagatagggagaaaaatgcaattaagcct 205686  T

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Target: scaffold0376 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 7597 - 7653
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||| ||||||| ||||||||||||| |||| ||| |||||||||||||||||    
T  7597 gagggggtacaaaatcgcacaattagcaaaagataggggaaaaagtgcaattaagcc 7653  T

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Target: scaffold0376; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 7508 - 7454
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| || |||||||||| |||| ||| ||||||||||||||||||    
T  7508 ggggtgcaaaatcgcataattagcaaaagataggggaaaaagtgcaattaagcct 7454  T

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Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 17153 - 17209
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||| ||||||||||  ||||||||||||| |||| |||||||||||||||||||||    
T  17153 gaggcggtgcaaaattgcacaattagcaaaagatagggggaaaagtgcaattaagcc 17209  T

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Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 16908 - 16853
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||| |||| ||||||||||||| ||| |||||||||  |||||||||||    
T  16908 gagggggtgcataatcgcacaattagcaaaagat-aggggaaaaaggcaattaagcc 16853  T

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Target: scaffold0160 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 29321 - 29274
Alignment:
Q  164 gttggcttgaaatcttggagtgtgttcctctcaaggtctcaggttcga 211  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  29321 gttggcttggaatcttgaagtgtgttcctctcaaggtcttaggttcga 29274  T

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Target: scaffold1221 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 1564 - 1503
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcctaaaattta 145  Q
    ||||||||||||||||||||| ||||| ||||  || ||||||||||||||||| ||||||||    
T  1564 ggggtgcaaaatcacacaattggcaaaagatagaggaaaaagtgcaattaagcc-aaaattta 1503  T

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Target: scaffold1221; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 1781 - 1834
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaa 133  Q
    |||| ||||||||||| |||||| | |||| |||| ||||||||||||||||||    
T  1781 gaggaggtgcaaaatcgcacaataaacaaaagatagggggaaaagtgcaattaa 1834  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 19674 - 19620
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||||||| |||||||||||||    
T  19674 ggggtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaagcct 19620  T

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Target: scaffold0176; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 20043 - 20099
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagccta 138  Q
    |||| |||||||| |||||||  ||||| |||||||| |||||||||||||||||||    
T  20043 ggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagccta 20099  T

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Target: scaffold0802 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 1175 - 1118
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcc 136  Q
    |||||||||||||||| |||||||| |||| |||| |||| |||||||||||||||||    
T  1175 gagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

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Target: scaffold0802; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 1417 - 1474
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcc 136  Q
    |||||||||||||||| ||||||| ||||| |||| |||| |||||||||||||||||    
T  1417 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

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Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 763 - 816
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| |||||| ||| ||| |||||||||||||||||    
T  763 ggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaagcc 816  T

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Target: scaffold0194 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 13107 - 13042
Alignment:
Q  154 gcttggttgtgttggcttgaaatcttggagtgtgttcctc-tcaaggtctcaggttcgaatctctc 218  Q
    ||||||| || ||||||||| |||| |||||||| ||||| |||||||||||||||||| ||||||    
T  13107 gcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 411979 - 411923
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgataaggggaaaagtgcaattaagcc 136  Q
    |||||||||||||||| |||||||  |||| |||| |||| ||||||||||||||||    
T  411979 gagggggtgcaaaatcgcacaattgacaaaagatagggggtaaagtgcaattaagcc 411923  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 38695 - 38750
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagggg-aaaagtgcaattaagcct 137  Q
    ||||||||||||| ||||||| |||||| ||| |||| ||||||||||||||||||    
T  38695 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 38750  T

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Target: scaffold0328 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 6206 - 6152
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgata-aggggaaaagtgcaattaagcc 136  Q
    |||||| |||||| ||||||||||||| |||| ||| ||||||||||||||||||    
T  6206 ggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 185274 - 185328
Alignment:
Q  83 ggggtgcaaaatcacacaattagcaaacgataagg-ggaaaagtgcaattaagcc 136  Q
    ||||||||||||| ||||||| |||||| ||| || |||||||||||||||||||    
T  185274 ggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 73023 - 72967
Alignment:
Q  80 gagggggtgcaaaatcacacaattagcaaacgat-aaggggaaaagtgcaattaagc 135  Q
    |||| ||||||||||  ||||||||||||| ||| |||||||||| |||||||||||    
T  73023 gaggcggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaattaagc 72967  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 9960 - 9904
Alignment:
Q  82 gggggtgcaaaatcacacaattagcaaacgataaggggaaaa-gtgcaattaagcct 137  Q
    ||||||| |||||| ||||||| |||||| ||| |||||||| ||||||||||||||    
T  9960 gggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 9904  T

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